› 2nyv

X-ray diffraction
2.1Å resolution

X-ray crystal structure of a phosphoglycolate phosphatase from Aquifex aeolicus

Released:
DOI: 10.2210/pdb2nyv/pdb
PDB entry 2nyv coloured by chain, front view.
PDB entry 2nyv coloured by chain, side view.
PDB entry 2nyv coloured by chain, top view.
Source organism: Aquifex aeolicus
Entry authors: Ciatto C, Min T, Gorman J, Burley SK, Shapiro L, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Reaction catalysed: 
2-phosphoglycolate + H(2)O = glycolate + phosphate
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130486 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Phosphoglycolate phosphatase Chain: A
Molecule details ›
Chain: A
Length: 222 amino acids
Theoretical weight: 25.1 KDa
Source organism: Aquifex aeolicus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: O67359 (Residues: 2-213; Coverage: 100%)
Gene names: aq_1342, gph
Sequence domains: haloacid dehalogenase-like hydrolase
Structure domains:

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 2 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: C2221
Unit cell:
a: 63.084Å b: 121.698Å c: 74.474Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.204 0.204 0.269
Expression system: Escherichia coli BL21

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