› 2kjm

Solution NMR

Solution structure of SLBP RNA binding domain fragment

Released:
DOI: 10.2210/pdb2kjm/pdb
PDB entry 2kjm coloured by chain, ensemble of 20 models, front view.
PDB entry 2kjm coloured by chain, ensemble of 20 models, side view.
PDB entry 2kjm coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Primary publication:
Interaction of the histone mRNA hairpin with stem-loop binding protein (SLBP) and regulation of the SLBP-RNA complex by phosphorylation and proline isomerization.
Zhang M, Lam TT, Tonelli M, Marzluff WF, Thapar R
Biochemistry 51 3215-31 (2012)
PMID: 22439849

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172012 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Histone RNA hairpin-binding protein Chain: A
Molecule details ›
Chain: A
Length: 30 amino acids
Theoretical weight: 3.67 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q14493 (Residues: 129-158; Coverage: 11%)
Gene names: HBP, SLBP
Sequence domains: Histone RNA hairpin-binding protein RNA-binding domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing, torsion angle dynamics
Expression system: Escherichia coli

Quick links

Citations

8 review citations

Recognition modes of RNA tetraloops and tetraloop-like motifs by RNA-binding proteins.
Thapar et al. (2014)
7 more

3 mentions without citation

Interaction of the histone mRNA hairpin with stem-loop binding protein (SLBP) and regulation of the SLBP-RNA complex by phosphorylation and proline isomerization.
Zhang et al. (2012)
2 more