Function and Biology

SET domain of RIZ1 tumor suppressor (PRDM2)

Source organism: Homo sapiens
Biochemical function: histone methyltransferase activity
Biological process: not assigned
Cellular component: not assigned

EC 2.1.1.355: [Histone H3]-lysine(9) N-trimethyltransferase

Reaction catalysed:
(1a) S-adenosyl-L-methionine + a [histone H3]-L-lysine(9) = S-adenosyl-L-homocysteine + a [histone H3]-N(6)-methyl-L-lysine(9)
Systematic name:
S-adenosyl-L-methionine:[histone H3]-L-lysine(9) N(6)-methyltransferase

GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF21549
Domain description: PR domain zinc finger protein 2, PR domain
Occurring in:
  1. PR domain zinc finger protein 2

InterPro InterPro annotations
IPR001214
Domain description: SET domain
Occurring in:
  1. PR domain zinc finger protein 2
IPR046341
Domain description: SET domain superfamily
Occurring in:
  1. PR domain zinc finger protein 2
IPR044414
Domain description: PRDM2, PR/SET domain
Occurring in:
  1. PR domain zinc finger protein 2

Structure domain

CATH CATH domain
2.170.270.10
Class: Mainly Beta
Architecture: Beta Complex
Topology: Beta-clip-like
Homology: SET domain
Occurring in:
  1. PR domain zinc finger protein 2
The deposited structure of PDB entry 2jv0 contains 1 copy of CATH domain 2.170.270.10 (Beta-clip-like) in PR domain zinc finger protein 2. Showing 1 copy in chain A.