› 2gn5

X-ray diffraction
2.3Å resolution

REFINED STRUCTURE OF THE GENE 5 DNA BINDING PROTEIN FROM BACTERIOPHAGE FD

Released:
DOI: 10.2210/pdb2gn5/pdb
PDB entry 2gn5 coloured by chain, front view.
PDB entry 2gn5 coloured by chain, side view.
PDB entry 2gn5 coloured by chain, top view.
Source organism: Escherichia virus M13
Primary publication:
Refined structure of the gene 5 DNA binding protein from bacteriophage fd.
Brayer GD, McPherson A
J Mol Biol 169 565-96 (1983)
PMID: 6684697

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159613 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA-Binding protein G5P Chain: A
Molecule details ›
Chain: A
Length: 87 amino acids
Theoretical weight: 9.7 KDa
Source organism: Escherichia virus M13
Expression system: Not provided
UniProt:
  • Canonical: P69542 (Residues: 1-87; Coverage: 100%)
Gene name: V
Sequence domains: Helix-destabilising protein
Structure domains: Nucleic acid-binding proteins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: C2
Unit cell:
a: 76.08Å b: 27.78Å c: 42Å
α: 90° β: 102.7° γ: 90°
R-values:
R R work R free
0.217 0.217 not available
Expression system: Not provided

Quick links

Citations

10 review citations

Protein-protein interactions: a review of protein dimer structures.
Jones et al. (1995)
9 more

6 mentions without citation

Development of a polarizable force field for proteins via ab initio quantum chemistry: first generation model and gas phase tests.
Kaminski et al. (2002)
5 more