› 2d7t

X-ray diffraction
1.7Å resolution

Crystal structure of human anti polyhydroxybutyrate antibody Fv

Released:
DOI: 10.2210/pdb2d7t/pdb
PDB entry 2d7t coloured by chain, front view.
PDB entry 2d7t coloured by chain, side view.
PDB entry 2d7t coloured by chain, top view.
Source organism: Homo sapiens
Entry author: Watanabe H

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179693 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ig-like domain-containing protein Chain: H
Molecule details ›
Chain: H
Length: 139 amino acids
Theoretical weight: 15.48 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9UL95 (Residues: 1-125; Coverage: 93%)
Sequence domains: Immunoglobulin V-set domain
Structure domains: Immunoglobulins
Ig-like domain-containing protein Chain: L
Molecule details ›
Chain: L
Length: 116 amino acids
Theoretical weight: 12.7 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q6GMX0 (Residues: 23-130; Coverage: 51%)
Sequence domains: Immunoglobulin V-set domain
Structure domains: Immunoglobulins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE BL-6A
Spacegroup: I222
Unit cell:
a: 63.409Å b: 73.62Å c: 103.299Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.19 0.214
Expression system: Escherichia coli BL21(DE3)

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