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X-Ray structure of apo-Secoisolariciresinol Dehydrogenase

X-ray diffraction
1.6Å resolution
PDB entry 2bgk coloured by chain, front view.
PDB entry 2bgk coloured by chain, side view.
PDB entry 2bgk coloured by chain, top view.
Source organism: Podophyllum peltatum
Assembly composition:
homo tetramer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Secoisolariciresinol dehydrogenase
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Multimeric state: homo tetramer
Accessible surface area: 35992.64 Å2
Buried surface area: 17469.64 Å2
Dissociation area: 5,546.15 Å2
Dissociation energy (ΔGdiss): 76.44 kcal/mol
Dissociation entropy (TΔSdiss): 15.55 kcal/mol
Symmetry number: 4
PDBe Complex ID: PDB-CPX-188242

Macromolecules

Secoisolariciresinol dehydrogenase
Chains: A, B
Length: 278 amino acids
Theoretical weight: 29.29 KDa
Source organism: Podophyllum peltatum
Expression system: Escherichia coli
UniProt:
  • Canonical: Q94KL8 (Residues: 1-278; Coverage: 100%)
Pfam: Enoyl-(Acyl carrier protein) reductase
InterPro:
CATH: NAD(P)-binding Rossmann-like Domain
SCOP: Tyrosine-dependent oxidoreductases
Secoisolariciresinol dehydrogenase in PDB entry 2bgk, assembly 1, front view.
Secoisolariciresinol dehydrogenase in PDB entry 2bgk, assembly 1, side view.
Secoisolariciresinol dehydrogenase in PDB entry 2bgk, assembly 1, top view.
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