PDBe 2oyf

X-ray diffraction
1.2Å resolution

Crystal Structure of the complex of phospholipase A2 with indole acetic acid at 1.2 A resolution

Released:
Source organism: Daboia russelii pulchella
Entry authors: Kumar S, Hariprasad G, Singh N, Sharma S, Kaur P, Perbandt M, Betzel C, Singh TP

Function and Biology Details

Reaction catalysed:
Phosphatidylcholine + H(2)O = 1-acylglycerophosphocholine + a carboxylate
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Basic phospholipase A2 VRV-PL-VIIIa Chain: A
Molecule details ›
Chain: A
Length: 121 amino acids
Theoretical weight: 13.63 KDa
Source organism: Daboia russelii pulchella
UniProt:
  • Canonical: P59071 (Residues: 1-121; Coverage: 100%)
Sequence domains: Phospholipase A2
Structure domains: Phospholipase A2 domain

Ligands and Environments

3 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X11
Spacegroup: P43
Unit cell:
a: 52.31Å b: 52.31Å c: 47.835Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.189 0.188 0.208