PDBe 2jsn

Solution NMR

Solution structure of the atypical PDZ-like domain of synbindin

Source organism: Homo sapiens
Primary publication:
Solution structure of synbindin atypical PDZ domain and interaction with syndecan-2.
Protein Pept. Lett. 16 189-95 (2009)
PMID: 19200043

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Trafficking protein particle complex subunit 4 Chain: A
Molecule details ›
Chain: A
Length: 96 amino acids
Theoretical weight: 10.82 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
  • Canonical: Q9Y296 (Residues: 19-106; Coverage: 40%)
Gene names: CGI-104, HSPC172, PTD009, SBDN, TRAPPC4
Structure domains: Pdz3 Domain

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 79%
Refinement method: molecular dynamics, simulated annealing
Chemical shifts: BMR15370  
Expression system: Escherichia coli