PDBe 2duo

X-ray diffraction
1.8Å resolution

Crystal structure of VIP36 exoplasmic/lumenal domain, Ca2+-bound form

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Vesicular integral-membrane protein VIP36 Chains: A, B
Molecule details ›
Chains: A, B
Length: 253 amino acids
Theoretical weight: 28.93 KDa
Source organism: Canis lupus familiaris
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P49256 (Residues: 51-301; Coverage: 80%)
Gene name: LMAN2
Sequence domains: Legume-like lectin family
Structure domains: Jelly Rolls

Ligands and Environments

2 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A
Spacegroup: C2
Unit cell:
a: 170.7Å b: 45.4Å c: 116.1Å
α: 90° β: 131.5° γ: 90°
R-values:
R R work R free
0.206 0.205 0.241
Expression system: Escherichia coli BL21(DE3)