› 1zyg

Solution NMR

Structure of a Supercoiling Responsive DNA Site

Released:
DOI: 10.2210/pdb1zyg/pdb
PDB entry 1zyg coloured by chain, ensemble of 15 models, front view.
PDB entry 1zyg coloured by chain, ensemble of 15 models, side view.
PDB entry 1zyg coloured by chain, ensemble of 15 models, top view.
Source organism: Synthetic construct
Primary publication:
Structural and dynamic basis of a supercoiling-responsive DNA element.
Bae SH, Yun SH, Sun D, Lim HM, Choi BS
Nucleic Acids Res 34 254-61 (2006)
PMID: 16414956

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-114965 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*CP*AP*AP*CP*CP*CP*GP*GP*GP*TP*TP*G)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 12 nucleotides
Theoretical weight: 3.66 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing, torsion anlge dynamics
Expression system: Not provided

Quick links

Citations

3 review citations

Bullied no more: when and how DNA shoves proteins around.
Fogg et al. (2012)
2 more

1 mention without citation

Structural and dynamic basis of a supercoiling-responsive DNA element.
Bae et al. (2006)