Function and Biology

Solution structure of Calcium-S100A13 (minimized mean structure)

Source organism: Homo sapiens
Biochemical function: RAGE receptor binding
Biological process: mast cell degranulation
Cellular component: perinuclear region of cytoplasm

Sequence family

Pfam Protein family (Pfam)
PF01023
Domain description: S-100/ICaBP type calcium binding domain
Occurring in:
  1. Protein S100-A13
The deposited structure of PDB entry 1yut contains 2 copies of Pfam domain PF01023 (S-100/ICaBP type calcium binding domain) in Protein S100-A13. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR013787
Domain description: S100/CaBP-9k-type, calcium binding, subdomain
Occurring in:
  1. Protein S100-A13
IPR011992
Domain description: EF-hand domain pair
Occurring in:
  1. Protein S100-A13

Structure domain

CATH CATH domain
1.10.238.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Recoverin; domain 1
Homology: EF-hand
Occurring in:
  1. Protein S100-A13
The deposited structure of PDB entry 1yut contains 2 copies of CATH domain 1.10.238.10 (Recoverin; domain 1) in Protein S100-A13. Showing 1 copy in chain A.
SCOP SCOP annotation
47478
Class: All alpha proteins
Fold: EF Hand-like
Superfamily: EF-hand
Occurring in:
  1. Protein S100-A13
The deposited structure of PDB entry 1yut contains 2 copies of SCOP domain 47478 (S100 proteins) in Protein S100-A13. Showing 1 copy in chain A.