› 1ttd

Solution NMR

SOLUTION-STATE STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-SYN THYMINE CYCLOBUTANE DIMER

Released:
DOI: 10.2210/pdb1ttd/pdb
PDB entry 1ttd coloured by chain, front view.
PDB entry 1ttd coloured by chain, side view.
PDB entry 1ttd coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Solution-state structure of a DNA dodecamer duplex containing a Cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA.
McAteer K, Jing Y, Kao J, Taylor JS, Kennedy MA
J Mol Biol 282 1013-32 (1998)
PMID: 9753551

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-114657 (preferred)
Entry contents:
2 distinct DNA molecules
Macromolecules (2 distinct):
DNA (5'-D(*GP*CP*AP*CP*GP*AP*AP*(TTD)P*AP*AP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 11 nucleotides
Theoretical weight: 3.7 KDa
Source organism: Synthetic construct
Expression system: Not provided
DNA (5'-D(*CP*TP*TP*AP*AP*TP*TP*CP*GP*TP*GP*C)-3') Chain: B
Molecule details ›
Chain: B
Length: 12 nucleotides
Theoretical weight: 3.63 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand TTD 1 x TTD

Experiments and Validation Details

Entry percentile scores
Refinement method: molecular dynamics
Expression system: Not provided

Quick links

Citations

11 review citations

DNA excited-state dynamics: from single bases to the double helix.
Middleton et al. (2009)
10 more

5 mentions without citation

Photochemistry and Photobiology of the Spore Photoproduct: A 50-Year Journey.
Setlow et al. (2015)
4 more