Function and Biology

Human GM2 Activator Protein PAF complex

Source organism: Homo sapiens
Biochemical function: beta-N-acetylgalactosaminidase activity
Biological process: maintenance of location in cell
Cellular component: extracellular exosome

Sequence family

Pfam Protein family (Pfam)
PF02221
Domain description: ML domain
Occurring in:
  1. Ganglioside GM2 activator
The deposited structure of PDB entry 1tjj contains 3 copies of Pfam domain PF02221 (ML domain) in Ganglioside GM2 activator. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR003172
Domain description: MD-2-related lipid-recognition domain
Occurring in:
  1. Ganglioside GM2 activator
IPR036846
Domain description: GM2-AP, lipid-recognition domain superfamily
Occurring in:
  1. Ganglioside GM2 activator
IPR028996
Domain description: Ganglioside GM2 activator
Occurring in:
  1. Ganglioside GM2 activator

Structure domain

CATH CATH domain
2.70.220.10
Class: Mainly Beta
Architecture: Distorted Sandwich
Topology: Ganglioside M2 Activator Protein; Chain: A,
Homology: Ganglioside GM2 activator
Occurring in:
  1. Ganglioside GM2 activator
The deposited structure of PDB entry 1tjj contains 3 copies of CATH domain 2.70.220.10 (Ganglioside M2 Activator Protein; Chain: A,) in Ganglioside GM2 activator. Showing 1 copy in chain A.
SCOP SCOP annotation
63708
Class: All beta proteins
Fold: Ganglioside M2 (gm2) activator
Superfamily: Ganglioside M2 (gm2) activator
Occurring in:
  1. Ganglioside GM2 activator
The deposited structure of PDB entry 1tjj contains 3 copies of SCOP domain 63708 (Ganglioside M2 (gm2) activator) in Ganglioside GM2 activator. Showing 1 copy in chain A.