1ruy Citations

The structure and receptor binding properties of the 1918 influenza hemagglutinin.

Abstract

The 1918 influenza pandemic resulted in about 20 million deaths. This enormous impact, coupled with renewed interest in emerging infections, makes characterization of the virus involved a priority. Receptor binding, the initial event in virus infection, is a major determinant of virus transmissibility that, for influenza viruses, is mediated by the hemagglutinin (HA) membrane glycoprotein. We have determined the crystal structures of the HA from the 1918 virus and two closely related HAs in complex with receptor analogs. They explain how the 1918 HA, while retaining receptor binding site amino acids characteristic of an avian precursor HA, is able to bind human receptors and how, as a consequence, the virus was able to spread in the human population.

Reviews - 1ruy mentioned but not cited (3)

  1. The Quest for a Truly Universal Influenza Vaccine. Jang YH, Seong BL. Front Cell Infect Microbiol 9 344 (2019)
  2. Role of electrostatic repulsion in controlling pH-dependent conformational changes of viral fusion proteins. Harrison JS, Higgins CD, O'Meara MJ, Koellhoffer JF, Kuhlman BA, Lai JR. Structure 21 1085-1096 (2013)
  3. Options and obstacles for designing a universal influenza vaccine. Jang YH, Seong BL. Viruses 6 3159-3180 (2014)

Articles - 1ruy mentioned but not cited (18)

  1. Protection of mice against lethal challenge with 2009 H1N1 influenza A virus by 1918-like and classical swine H1N1 based vaccines. Manicassamy B, Medina RA, Hai R, Tsibane T, Stertz S, Nistal-Villán E, Palese P, Basler CF, García-Sastre A. PLoS Pathog 6 e1000745 (2010)
  2. Predicting the antigenic structure of the pandemic (H1N1) 2009 influenza virus hemagglutinin. Igarashi M, Ito K, Yoshida R, Tomabechi D, Kida H, Takada A. PLoS One 5 e8553 (2010)
  3. Structures of receptor complexes of a North American H7N2 influenza hemagglutinin with a loop deletion in the receptor binding site. Yang H, Chen LM, Carney PJ, Donis RO, Stevens J. PLoS Pathog 6 e1001081 (2010)
  4. Structure and Receptor binding properties of a pandemic H1N1 virus hemagglutinin. Yang H, Carney P, Stevens J. PLoS Curr 2 RRN1152 (2010)
  5. Influenza hemagglutinin membrane anchor. Benton DJ, Nans A, Calder LJ, Turner J, Neu U, Lin YP, Ketelaars E, Kallewaard NL, Corti D, Lanzavecchia A, Gamblin SJ, Rosenthal PB, Skehel JJ. Proc Natl Acad Sci U S A 115 10112-10117 (2018)
  6. Protein intrinsic disorder and influenza virulence: the 1918 H1N1 and H5N1 viruses. Goh GK, Dunker AK, Uversky VN. Virol J 6 69 (2009)
  7. The receptor-binding domain of influenza virus hemagglutinin produced in Escherichia coli folds into its native, immunogenic structure. DuBois RM, Aguilar-Yañez JM, Mendoza-Ochoa GI, Oropeza-Almazán Y, Schultz-Cherry S, Alvarez MM, White SW, Russell CJ. J Virol 85 865-872 (2011)
  8. An influenza A/H1N1/2009 hemagglutinin vaccine produced in Escherichia coli. Aguilar-Yáñez JM, Portillo-Lara R, Mendoza-Ochoa GI, García-Echauri SA, López-Pacheco F, Bulnes-Abundis D, Salgado-Gallegos J, Lara-Mayorga IM, Webb-Vargas Y, León-Angel FO, Rivero-Aranda RE, Oropeza-Almazán Y, Ruiz-Palacios GM, Zertuche-Guerra MI, DuBois RM, White SW, Schultz-Cherry S, Russell CJ, Alvarez MM. PLoS One 5 e11694 (2010)
  9. Potent sialic acid inhibitors that target influenza A virus hemagglutinin. Chang YJ, Yeh CY, Cheng JC, Huang YQ, Hsu KC, Lin YF, Lu CH. Sci Rep 11 8637 (2021)
  10. Antigenic drift of H1N1 influenza A virus in pigs with and without passive immunity. Diaz A, Allerson M, Culhane M, Sreevatsan S, Torremorell M. Influenza Other Respir Viruses 7 Suppl 4 52-60 (2013)
  11. Bioinformatics design and experimental validation of influenza A virus multi-epitopes that induce neutralizing antibodies. Ramírez-Salinas GL, García-Machorro J, Rojas-Hernández S, Campos-Rodríguez R, de Oca AC, Gomez MM, Luciano R, Zimic M, Correa-Basurto J. Arch Virol 165 891-911 (2020)
  12. Genome plasticity of triple-reassortant H1N1 influenza A virus during infection of vaccinated pigs. Diaz A, Enomoto S, Romagosa A, Sreevatsan S, Nelson M, Culhane M, Torremorell M. J Gen Virol 96 2982-2993 (2015)
  13. HASP server: a database and structural visualization platform for comparative models of influenza A hemagglutinin proteins. Ambroggio XI, Dommer J, Gopalan V, Dunham EJ, Taubenberger JK, Hurt DE. BMC Bioinformatics 14 197 (2013)
  14. Molecular-level simulation of pandemic influenza glycoproteins. Amaro RE, Li WW. Methods Mol Biol 819 575-594 (2012)
  15. Computational Ways to Enhance Protein Inhibitor Design. Jernigan RL, Sankar K, Jia K, Faraggi E, Kloczkowski A. Front Mol Biosci 7 607323 (2020)
  16. In Silico Analysis to Compare the Effectiveness of Assorted Drugs Prescribed for Swine flu in Diverse Medicine Systems. Raja K, Prabahar A, Selvakumar S, Raja TK. Indian J Pharm Sci 76 10-18 (2014)
  17. A Combinatorial approach: To design inhibitory molecules on Hemagglutinin protein of H1N1 virus (Swine Flu). Prasad CV, Chaudhary KK, Dinkar P. Bioinformation 9 565-571 (2013)
  18. Characterization of evolutionary changes in hemagglutinin of influenza H1N1 virus: a computational analysis. Rehman Z, Zafar R, Amir U, Niazi UH, Fahim A. Virusdisease 27 34-40 (2016)


Reviews citing this publication (84)

  1. Cross-species virus transmission and the emergence of new epidemic diseases. Parrish CR, Holmes EC, Morens DM, Park EC, Burke DS, Calisher CH, Laughlin CA, Saif LJ, Daszak P. Microbiol Mol Biol Rev 72 457-470 (2008)
  2. Influenza: lessons from past pandemics, warnings from current incidents. Horimoto T, Kawaoka Y. Nat Rev Microbiol 3 591-600 (2005)
  3. Advances in the development of influenza virus vaccines. Krammer F, Palese P. Nat Rev Drug Discov 14 167-182 (2015)
  4. Influenza hemagglutinin and neuraminidase membrane glycoproteins. Gamblin SJ, Skehel JJ. J Biol Chem 285 28403-28409 (2010)
  5. Role of receptor binding specificity in influenza A virus transmission and pathogenesis. de Graaf M, Fouchier RA. EMBO J 33 823-841 (2014)
  6. Sialobiology of influenza: molecular mechanism of host range variation of influenza viruses. Suzuki Y. Biol Pharm Bull 28 399-408 (2005)
  7. Host range restriction and pathogenicity in the context of influenza pandemic. Neumann G, Kawaoka Y. Emerg Infect Dis 12 881-886 (2006)
  8. Bat-derived influenza-like viruses H17N10 and H18N11. Wu Y, Wu Y, Tefsen B, Shi Y, Gao GF. Trends Microbiol 22 183-191 (2014)
  9. Cell surface biology mediated by low affinity multivalent protein-glycan interactions. Collins BE, Paulson JC. Curr Opin Chem Biol 8 617-625 (2004)
  10. Scientific barriers to developing vaccines against avian influenza viruses. Subbarao K, Joseph T. Nat Rev Immunol 7 267-278 (2007)
  11. Recent structural insights into the expanding world of carbohydrate-active enzymes. Davies GJ, Gloster TM, Henrissat B. Curr Opin Struct Biol 15 637-645 (2005)
  12. Enabling the 'host jump': structural determinants of receptor-binding specificity in influenza A viruses. Shi Y, Wu Y, Zhang W, Qi J, Gao GF. Nat Rev Microbiol 12 822-831 (2014)
  13. Coiled coils: attractive protein folding motifs for the fabrication of self-assembled, responsive and bioactive materials. Apostolovic B, Danial M, Klok HA. Chem Soc Rev 39 3541-3575 (2010)
  14. Entry of influenza A virus: host factors and antiviral targets. Edinger TO, Pohl MO, Stertz S. J Gen Virol 95 263-277 (2014)
  15. Variation and infectivity neutralization in influenza. Knossow M, Skehel JJ. Immunology 119 1-7 (2006)
  16. The role of swine in the generation of novel influenza viruses. Ma W, Lager KM, Vincent AL, Janke BH, Gramer MR, Richt JA. Zoonoses Public Health 56 326-337 (2009)
  17. Avian influenza A (H5N1). de Jong MD, Hien TT. J Clin Virol 35 2-13 (2006)
  18. The Role of histidine residues in low-pH-mediated viral membrane fusion. Kampmann T, Mueller DS, Mark AE, Young PR, Kobe B. Structure 14 1481-1487 (2006)
  19. Molecular basis of the structure and function of H1 hemagglutinin of influenza virus. Sriwilaijaroen N, Suzuki Y. Proc Jpn Acad Ser B Phys Biol Sci 88 226-249 (2012)
  20. Viral determinants of influenza A virus host range. Cauldwell AV, Long JS, Moncorgé O, Barclay WS. J Gen Virol 95 1193-1210 (2014)
  21. Receptor binding and pH stability - how influenza A virus hemagglutinin affects host-specific virus infection. Mair CM, Ludwig K, Herrmann A, Sieben C. Biochim Biophys Acta 1838 1153-1168 (2014)
  22. From lethal virus to life-saving vaccine: developing inactivated vaccines for pandemic influenza. Wood JM, Robertson JS. Nat Rev Microbiol 2 842-847 (2004)
  23. A Perspective on the Structural and Functional Constraints for Immune Evasion: Insights from Influenza Virus. Wu NC, Wilson IA. J Mol Biol 429 2694-2709 (2017)
  24. Transmission of influenza A viruses. Neumann G, Kawaoka Y. Virology 479-480 234-246 (2015)
  25. Influenza virus entry. Luo M. Adv Exp Med Biol 726 201-221 (2012)
  26. The Interplay between the Host Receptor and Influenza Virus Hemagglutinin and Neuraminidase. Byrd-Leotis L, Cummings RD, Steinhauer DA. Int J Mol Sci 18 E1541 (2017)
  27. Glycans as receptors for influenza pathogenesis. Viswanathan K, Chandrasekaran A, Srinivasan A, Raman R, Sasisekharan V, Sasisekharan R. Glycoconj J 27 561-570 (2010)
  28. Novel universal influenza virus vaccine approaches. Krammer F. Curr Opin Virol 17 95-103 (2016)
  29. The Polyomaviridae: Contributions of virus structure to our understanding of virus receptors and infectious entry. Neu U, Stehle T, Atwood WJ. Virology 384 389-399 (2009)
  30. Anti-influenza agents from Traditional Chinese Medicine. Ge H, Wang YF, Xu J, Gu Q, Liu HB, Xiao PG, Zhou J, Liu Y, Yang Z, Su H. Nat Prod Rep 27 1758-1780 (2010)
  31. Antibody Immunodominance: The Key to Understanding Influenza Virus Antigenic Drift. Altman MO, Angeletti D, Yewdell JW. Viral Immunol 31 142-149 (2018)
  32. Structural basis of influenza virus neutralization. Han T, Marasco WA. Ann N Y Acad Sci 1217 178-190 (2011)
  33. Structural insights into the design of novel anti-influenza therapies. Wu NC, Wilson IA. Nat Struct Mol Biol 25 115-121 (2018)
  34. H5N1 receptor specificity as a factor in pandemic risk. Paulson JC, de Vries RP. Virus Res 178 99-113 (2013)
  35. Strategies for developing vaccines against H5N1 influenza A viruses. Horimoto T, Kawaoka Y. Trends Mol Med 12 506-514 (2006)
  36. Strategies to guide the antibody affinity maturation process. Doria-Rose NA, Joyce MG. Curr Opin Virol 11 137-147 (2015)
  37. Recent progress in structure-based anti-influenza drug design. Du J, Cross TA, Zhou HX. Drug Discov Today 17 1111-1120 (2012)
  38. Review: Structural determinants of pattern recognition by lung collectins. Seaton BA, Crouch EC, McCormack FX, Head JF, Hartshorn KL, Mendelsohn R. Innate Immun 16 143-150 (2010)
  39. Avian influenza: a review. Thomas JK, Noppenberger J. Am J Health Syst Pharm 64 149-165 (2007)
  40. Characteristics of human infection with avian influenza viruses and development of new antiviral agents. Liu Q, Liu DY, Yang ZQ. Acta Pharmacol Sin 34 1257-1269 (2013)
  41. Harnessing self-assembled peptide nanoparticles in epitope vaccine design. Negahdaripour M, Golkar N, Hajighahramani N, Kianpour S, Nezafat N, Ghasemi Y. Biotechnol Adv 35 575-596 (2017)
  42. N-linked glycosylation in the hemagglutinin of influenza A viruses. Kim JI, Park MS. Yonsei Med J 53 886-893 (2012)
  43. Adaptation of influenza viruses to human airway receptors. Thompson AJ, Paulson JC. J Biol Chem 296 100017 (2021)
  44. The antigenic architecture of the hemagglutinin of influenza H5N1 viruses. Velkov T, Ong C, Baker MA, Kim H, Li J, Nation RL, Huang JX, Cooper MA, Rockman S. Mol Immunol 56 705-719 (2013)
  45. The threat of avian influenza A (H5N1). Part I: Epidemiologic concerns and virulence determinants. Cinatl J, Michaelis M, Doerr HW. Med Microbiol Immunol 196 181-190 (2007)
  46. An overview of influenza A virus receptors. Ge S, Wang Z. Crit Rev Microbiol 37 157-165 (2011)
  47. Sialic Acid Receptors: The Key to Solving the Enigma of Zoonotic Virus Spillover. Kuchipudi SV, Nelli RK, Gontu A, Satyakumar R, Surendran Nair M, Subbiah M. Viruses 13 262 (2021)
  48. Avian influenza virus. Lee CW, Saif YM. Comp Immunol Microbiol Infect Dis 32 301-310 (2009)
  49. Glycan-based high-affinity ligands for toxins and pathogen receptors. Kulkarni AA, Weiss AA, Iyer SS. Med Res Rev 30 327-393 (2010)
  50. Competitive Cooperation of Hemagglutinin and Neuraminidase during Influenza A Virus Entry. Du R, Cui Q, Rong L. Viruses 11 E458 (2019)
  51. Neutralizing anti-influenza virus monoclonal antibodies: therapeutics and tools for discovery. Martinez O, Tsibane T, Basler CF. Int Rev Immunol 28 69-92 (2009)
  52. Mutations associated with severity of the pandemic influenza A(H1N1)pdm09 in humans: a systematic review and meta-analysis of epidemiological evidence. Goka EA, Vallely PJ, Mutton KJ, Klapper PE. Arch Virol 159 3167-3183 (2014)
  53. Pulmonary surfactant protein D in first-line innate defence against influenza A virus infections. Hillaire ML, Haagsman HP, Osterhaus AD, Rimmelzwaan GF, van Eijk M. J Innate Immun 5 197-208 (2013)
  54. Structural Biology of Influenza Hemagglutinin: An Amaranthine Adventure. Wu NC, Wilson IA. Viruses 12 E1053 (2020)
  55. Glycan receptor specificity as a useful tool for characterization and surveillance of influenza A virus. Raman R, Tharakaraman K, Shriver Z, Jayaraman A, Sasisekharan V, Sasisekharan R. Trends Microbiol 22 632-641 (2014)
  56. Harnessing glycomics technologies: integrating structure with function for glycan characterization. Robinson LN, Artpradit C, Raman R, Shriver ZH, Ruchirawat M, Sasisekharan R. Electrophoresis 33 797-814 (2012)
  57. Modulation of the pH Stability of Influenza Virus Hemagglutinin: A Host Cell Adaptation Strategy. Di Lella S, Herrmann A, Mair CM. Biophys J 110 2293-2301 (2016)
  58. What adaptive changes in hemagglutinin and neuraminidase are necessary for emergence of pandemic influenza virus from its avian precursor? Gambaryan AS, Matrosovich MN. Biochemistry (Mosc) 80 872-880 (2015)
  59. Immunogen design for HIV-1 and influenza. Rathore U, Kesavardhana S, Mallajosyula VV, Varadarajan R. Biochim Biophys Acta 1844 1891-1906 (2014)
  60. Designing vaccines for pandemic influenza. Horimoto T, Kawaoka Y. Curr Top Microbiol Immunol 333 165-176 (2009)
  61. Evolutionary ecology of virus emergence. Dennehy JJ. Ann N Y Acad Sci 1389 124-146 (2017)
  62. Viral Membrane Fusion and the Transmembrane Domain. Barrett CT, Dutch RE. Viruses 12 E693 (2020)
  63. Breaking the Convention: Sialoglycan Variants, Coreceptors, and Alternative Receptors for Influenza A Virus Entry. Karakus U, Pohl MO, Stertz S. J Virol 94 e01357-19 (2020)
  64. The specificity of the influenza B virus hemagglutinin receptor binding pocket: what does it bind to? Velkov T. J Mol Recognit 26 439-449 (2013)
  65. Hemagglutinin Structure and Activities. Gamblin SJ, Vachieri SG, Xiong X, Zhang J, Martin SR, Skehel JJ. Cold Spring Harb Perspect Med 11 a038638 (2021)
  66. Role of Post-translational Modifications in Influenza A Virus Life Cycle and Host Innate Immune Response. Hu J, Zhang L, Liu X. Front Microbiol 11 517461 (2020)
  67. The structural variability of the influenza A hemagglutinin receptor-binding site. Lazniewski M, Dawson WK, Szczepinska T, Plewczynski D. Brief Funct Genomics 17 415-427 (2018)
  68. Bench-to-bedside review: rare and common viral infections in the intensive care unit--linking pathophysiology to clinical presentation. Stollenwerk N, Harper RW, Sandrock CE. Crit Care 12 219 (2008)
  69. Influenza as a model system for studying the cross-species transfer and evolution of the SARS coronavirus. Bush RM. Philos Trans R Soc Lond B Biol Sci 359 1067-1073 (2004)
  70. Mass spectrometry analysis of the influenza virus. Downard KM, Morrissey B, Schwahn AB. Mass Spectrom Rev 28 35-49 (2009)
  71. The threat of avian influenza a (H5N1): part II: Clues to pathogenicity and pathology. Cinatl J, Michaelis M, Doerr HW. Med Microbiol Immunol 196 191-201 (2007)
  72. Tissue and host tropism of influenza viruses: importance of quantitative analysis. Zhang H. Sci China C Life Sci 52 1101-1110 (2009)
  73. Prospects for antibody-based universal influenza vaccines in the context of widespread pre-existing immunity. Wheatley AK, Kent SJ. Expert Rev Vaccines 14 1227-1239 (2015)
  74. Influenza A Virus Hemagglutinin and Other Pathogen Glycoprotein Interactions with NK Cell Natural Cytotoxicity Receptors NKp46, NKp44, and NKp30. Luczo JM, Ronzulli SL, Tompkins SM. Viruses 13 156 (2021)
  75. An overview of influenza A virus genes, protein functions, and replication cycle highlighting important updates. Chauhan RP, Gordon ML. Virus Genes 58 255-269 (2022)
  76. Structural and functional specificity of Influenza virus haemagglutinin and paramyxovirus fusion protein anchoring peptides. Kordyukova L. Virus Res 227 183-199 (2017)
  77. A Portrait of the Sialyl Glycan Receptor Specificity of the H10 Influenza Virus Hemagglutinin-A Picture of an Avian Virus on the Verge of Becoming a Pandemic? Schneider EK, Li J, Velkov T. Vaccines (Basel) 5 E51 (2017)
  78. Bat Influenza Viruses: Making a Double Agent of MHC Class II. Banerjee A, Mossman KL, Miller MS. Trends Microbiol 28 703-706 (2020)
  79. Structural Insights for Anti-Influenza Vaccine Design. Han L, Chen C, Han X, Lin S, Ao X, Han X, Wang J, Ye H. Comput Struct Biotechnol J 17 475-483 (2019)
  80. Influenza: current evidence and informed predictions. Handa R, Teo S, Booy R. Expert Rev Vaccines 3 443-451 (2004)
  81. [Zoonoses]. Yamada A. Uirusu 54 17-22 (2004)
  82. Analysis Method of the Ion Current-Time Waveform Obtained from Low Aspect Ratio Solid-state Nanopores. Taniguchi M. Anal Sci 36 161-165 (2020)
  83. Global distribution, receptor binding, and cross-species transmission of H6 influenza viruses: risks and implications for humans. Yan Z, Li Y, Huang S, Wen F. J Virol 97 e0137023 (2023)
  84. Molecular Modeling of Viral Type I Fusion Proteins: Inhibitors of Influenza Virus Hemagglutinin and the Spike Protein of Coronavirus. Borisevich SS, Zarubaev VV, Shcherbakov DN, Yarovaya OI, Salakhutdinov NF. Viruses 15 902 (2023)

Articles citing this publication (321)

  1. Antibody recognition of a highly conserved influenza virus epitope. Ekiert DC, Bhabha G, Elsliger MA, Friesen RH, Jongeneelen M, Throsby M, Goudsmit J, Wilson IA. Science 324 246-251 (2009)
  2. Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses. Sui J, Hwang WC, Perez S, Wei G, Aird D, Chen LM, Santelli E, Stec B, Cadwell G, Ali M, Wan H, Murakami A, Yammanuru A, Han T, Cox NJ, Bankston LA, Donis RO, Liddington RC, Marasco WA. Nat Struct Mol Biol 16 265-273 (2009)
  3. Printed covalent glycan array for ligand profiling of diverse glycan binding proteins. Blixt O, Head S, Mondala T, Scanlan C, Huflejt ME, Alvarez R, Bryan MC, Fazio F, Calarese D, Stevens J, Razi N, Stevens DJ, Skehel JJ, van Die I, Burton DR, Wilson IA, Cummings R, Bovin N, Wong CH, Paulson JC. Proc Natl Acad Sci U S A 101 17033-17038 (2004)
  4. Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus. Stevens J, Blixt O, Tumpey TM, Taubenberger JK, Paulson JC, Wilson IA. Science 312 404-410 (2006)
  5. Structural basis of preexisting immunity to the 2009 H1N1 pandemic influenza virus. Xu R, Ekiert DC, Krause JC, Hai R, Crowe JE, Wilson IA. Science 328 357-360 (2010)
  6. Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities. Stevens J, Blixt O, Glaser L, Taubenberger JK, Palese P, Paulson JC, Wilson IA. J Mol Biol 355 1143-1155 (2006)
  7. Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin. Whittle JR, Zhang R, Khurana S, King LR, Manischewitz J, Golding H, Dormitzer PR, Haynes BF, Walter EB, Moody MA, Kepler TB, Liao HX, Harrison SC. Proc Natl Acad Sci U S A 108 14216-14221 (2011)
  8. Enhanced virulence of influenza A viruses with the haemagglutinin of the 1918 pandemic virus. Kobasa D, Takada A, Shinya K, Hatta M, Halfmann P, Theriault S, Suzuki H, Nishimura H, Mitamura K, Sugaya N, Usui T, Murata T, Maeda Y, Watanabe S, Suresh M, Suzuki T, Suzuki Y, Feldmann H, Kawaoka Y. Nature 431 703-707 (2004)
  9. A single amino acid substitution in 1918 influenza virus hemagglutinin changes receptor binding specificity. Glaser L, Stevens J, Zamarin D, Wilson IA, García-Sastre A, Tumpey TM, Basler CF, Taubenberger JK, Palese P. J Virol 79 11533-11536 (2005)
  10. Glycan topology determines human adaptation of avian H5N1 virus hemagglutinin. Chandrasekaran A, Srinivasan A, Raman R, Viswanathan K, Raguram S, Tumpey TM, Sasisekharan V, Sasisekharan R. Nat Biotechnol 26 107-113 (2008)
  11. Receptor binding by an H7N9 influenza virus from humans. Xiong X, Martin SR, Haire LF, Wharton SA, Daniels RS, Bennett MS, McCauley JW, Collins PJ, Walker PA, Skehel JJ, Gamblin SJ. Nature 499 496-499 (2013)
  12. Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses. Shi Y, Zhang W, Wang F, Qi J, Wu Y, Song H, Gao F, Bi Y, Zhang Y, Fan Z, Qin C, Sun H, Liu J, Haywood J, Liu W, Gong W, Wang D, Shu Y, Wang Y, Yan J, Gao GF. Science 342 243-247 (2013)
  13. Immunization by avian H5 influenza hemagglutinin mutants with altered receptor binding specificity. Yang ZY, Wei CJ, Kong WP, Wu L, Xu L, Smith DF, Nabel GJ. Science 317 825-828 (2007)
  14. Epidemiological evidence of an early wave of the 1918 influenza pandemic in New York City. Olson DR, Simonsen L, Edelson PJ, Morse SS. Proc Natl Acad Sci U S A 102 11059-11063 (2005)
  15. Massively parallel de novo protein design for targeted therapeutics. Chevalier A, Silva DA, Rocklin GJ, Hicks DR, Vergara R, Murapa P, Bernard SM, Zhang L, Lam KH, Yao G, Bahl CD, Miyashita SI, Goreshnik I, Fuller JT, Koday MT, Jenkins CM, Colvin T, Carter L, Bohn A, Bryan CM, Fernández-Velasco DA, Stewart L, Dong M, Huang X, Jin R, Wilson IA, Fuller DH, Baker D. Nature 550 74-79 (2017)
  16. Cross-protective potential of a novel monoclonal antibody directed against antigenic site B of the hemagglutinin of influenza A viruses. Yoshida R, Igarashi M, Ozaki H, Kishida N, Tomabechi D, Kida H, Ito K, Takada A. PLoS Pathog 5 e1000350 (2009)
  17. Flow cytometry reveals that H5N1 vaccination elicits cross-reactive stem-directed antibodies from multiple Ig heavy-chain lineages. Whittle JR, Wheatley AK, Wu L, Lingwood D, Kanekiyo M, Ma SS, Narpala SR, Yassine HM, Frank GM, Yewdell JW, Ledgerwood JE, Wei CJ, McDermott AB, Graham BS, Koup RA, Nabel GJ. J Virol 88 4047-4057 (2014)
  18. Extending the host range of Listeria monocytogenes by rational protein design. Wollert T, Pasche B, Rochon M, Deppenmeier S, van den Heuvel J, Gruber AD, Heinz DW, Lengeling A, Schubert WD. Cell 129 891-902 (2007)
  19. Defining B cell immunodominance to viruses. Angeletti D, Gibbs JS, Angel M, Kosik I, Hickman HD, Frank GM, Das SR, Wheatley AK, Prabhakaran M, Leggat DJ, McDermott AB, Yewdell JW. Nat Immunol 18 456-463 (2017)
  20. H1 and H7 influenza haemagglutinin structures extend a structural classification of haemagglutinin subtypes. Russell RJ, Gamblin SJ, Haire LF, Stevens DJ, Xiao B, Ha Y, Skehel JJ. Virology 325 287-296 (2004)
  21. Receptor binding by a ferret-transmissible H5 avian influenza virus. Xiong X, Coombs PJ, Martin SR, Liu J, Xiao H, McCauley JW, Locher K, Walker PA, Collins PJ, Kawaoka Y, Skehel JJ, Gamblin SJ. Nature 497 392-396 (2013)
  22. Microbial recognition of human cell surface glycoconjugates. Imberty A, Varrot A. Curr Opin Struct Biol 18 567-576 (2008)
  23. Characterization of highly pathogenic H5N1 avian influenza A viruses isolated from South Korea. Lee CW, Suarez DL, Tumpey TM, Sung HW, Kwon YK, Lee YJ, Choi JG, Joh SJ, Kim MC, Lee EK, Park JM, Lu X, Katz JM, Spackman E, Swayne DE, Kim JH. J Virol 79 3692-3702 (2005)
  24. Regioselective one-pot protection of carbohydrates. Wang CC, Lee JC, Luo SY, Kulkarni SS, Huang YW, Lee CC, Chang KL, Hung SC. Nature 446 896-899 (2007)
  25. Structures of receptor complexes formed by hemagglutinins from the Asian Influenza pandemic of 1957. Liu J, Stevens DJ, Haire LF, Walker PA, Coombs PJ, Russell RJ, Gamblin SJ, Skehel JJ. Proc Natl Acad Sci U S A 106 17175-17180 (2009)
  26. The origin and virulence of the 1918 "Spanish" influenza virus. Taubenberger JK. Proc Am Philos Soc 150 86-112 (2006)
  27. Genome-wide mutagenesis of influenza virus reveals unique plasticity of the hemagglutinin and NS1 proteins. Heaton NS, Sachs D, Chen CJ, Hai R, Palese P. Proc Natl Acad Sci U S A 110 20248-20253 (2013)
  28. Influenza hemagglutinin stem-fragment immunogen elicits broadly neutralizing antibodies and confers heterologous protection. Mallajosyula VV, Citron M, Ferrara F, Lu X, Callahan C, Heidecker GJ, Sarma SP, Flynn JA, Temperton NJ, Liang X, Varadarajan R. Proc Natl Acad Sci U S A 111 E2514-23 (2014)
  29. An avian influenza H5N1 virus that binds to a human-type receptor. Auewarakul P, Suptawiwat O, Kongchanagul A, Sangma C, Suzuki Y, Ungchusak K, Louisirirotchanakul S, Lerdsamran H, Pooruk P, Thitithanyanont A, Pittayawonganon C, Guo CT, Hiramatsu H, Jampangern W, Chunsutthiwat S, Puthavathana P. J Virol 81 9950-9955 (2007)
  30. Structural basis for antibody-mediated neutralization of Lassa virus. Hastie KM, Zandonatti MA, Kleinfelter LM, Heinrich ML, Rowland MM, Chandran K, Branco LM, Robinson JE, Garry RF, Saphire EO. Science 356 923-928 (2017)
  31. Structural characterization of the hemagglutinin receptor specificity from the 2009 H1N1 influenza pandemic. Xu R, McBride R, Nycholat CM, Paulson JC, Wilson IA. J Virol 86 982-990 (2012)
  32. Novel genotypes of H9N2 influenza A viruses isolated from poultry in Pakistan containing NS genes similar to highly pathogenic H7N3 and H5N1 viruses. Iqbal M, Yaqub T, Reddy K, McCauley JW. PLoS One 4 e5788 (2009)
  33. Single step multiplex real-time RT-PCR for H5N1 influenza A virus detection. Payungporn S, Chutinimitkul S, Chaisingh A, Damrongwantanapokin S, Buranathai C, Amonsin A, Theamboonlers A, Poovorawan Y. J Virol Methods 131 143-147 (2006)
  34. The inherent mutational tolerance and antigenic evolvability of influenza hemagglutinin. Thyagarajan B, Bloom JD. Elife 3 (2014)
  35. The influenza virus hemagglutinin head evolves faster than the stalk domain. Kirkpatrick E, Qiu X, Wilson PC, Bahl J, Krammer F. Sci Rep 8 10432 (2018)
  36. Accurate Measurement of the Effects of All Amino-Acid Mutations on Influenza Hemagglutinin. Doud MB, Bloom JD. Viruses 8 E155 (2016)
  37. Crystal structure of unliganded influenza B virus hemagglutinin. Wang Q, Cheng F, Lu M, Tian X, Ma J. J Virol 82 3011-3020 (2008)
  38. Analysis of residues near the fusion peptide in the influenza hemagglutinin structure for roles in triggering membrane fusion. Thoennes S, Li ZN, Lee BJ, Langley WA, Skehel JJ, Russell RJ, Steinhauer DA. Virology 370 403-414 (2008)
  39. Structural characterization of an early fusion intermediate of influenza virus hemagglutinin. Xu R, Wilson IA. J Virol 85 5172-5182 (2011)
  40. Local conformational fluctuations can modulate the coupling between proton binding and global structural transitions in proteins. Whitten ST, García-Moreno E B, Hilser VJ. Proc Natl Acad Sci U S A 102 4282-4287 (2005)
  41. Mapping the phosphoproteome of influenza A and B viruses by mass spectrometry. Hutchinson EC, Denham EM, Thomas B, Trudgian DC, Hester SS, Ridlova G, York A, Turrell L, Fodor E. PLoS Pathog 8 e1002993 (2012)
  42. Quantitative biochemical rationale for differences in transmissibility of 1918 pandemic influenza A viruses. Srinivasan A, Viswanathan K, Raman R, Chandrasekaran A, Raguram S, Tumpey TM, Sasisekharan V, Sasisekharan R. Proc Natl Acad Sci U S A 105 2800-2805 (2008)
  43. Variations in the hemagglutinin of the 2009 H1N1 pandemic virus: potential for strains with altered virulence phenotype? Ye J, Sorrell EM, Cai Y, Shao H, Xu K, Pena L, Hickman D, Song H, Angel M, Medina RA, Manicassamy B, Garcia-Sastre A, Perez DR. PLoS Pathog 6 e1001145 (2010)
  44. Avian and human receptor binding by hemagglutinins of influenza A viruses. Russell RJ, Stevens DJ, Haire LF, Gamblin SJ, Skehel JJ. Glycoconj J 23 85-92 (2006)
  45. An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level. Zhang W, Shi Y, Lu X, Shu Y, Qi J, Gao GF. Science 340 1463-1467 (2013)
  46. Glycosylation site alteration in the evolution of influenza A (H1N1) viruses. Sun S, Wang Q, Zhao F, Chen W, Li Z. PLoS One 6 e22844 (2011)
  47. Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variants. Lee JM, Huddleston J, Doud MB, Hooper KA, Wu NC, Bedford T, Bloom JD. Proc Natl Acad Sci U S A 115 E8276-E8285 (2018)
  48. The genesis of a pandemic influenza virus. Russell CJ, Webster RG. Cell 123 368-371 (2005)
  49. Amino acid residues in the fusion peptide pocket regulate the pH of activation of the H5N1 influenza virus hemagglutinin protein. Reed ML, Yen HL, DuBois RM, Bridges OA, Salomon R, Webster RG, Russell CJ. J Virol 83 3568-3580 (2009)
  50. Structure, receptor binding, and antigenicity of influenza virus hemagglutinins from the 1957 H2N2 pandemic. Xu R, McBride R, Paulson JC, Basler CF, Wilson IA. J Virol 84 1715-1721 (2010)
  51. Crystal structure of the swine-origin A (H1N1)-2009 influenza A virus hemagglutinin (HA) reveals similar antigenicity to that of the 1918 pandemic virus. Zhang W, Qi J, Shi Y, Li Q, Gao F, Sun Y, Lu X, Lu Q, Vavricka CJ, Liu D, Yan J, Gao GF. Protein Cell 1 459-467 (2010)
  52. Complete mapping of viral escape from neutralizing antibodies. Doud MB, Hensley SE, Bloom JD. PLoS Pathog 13 e1006271 (2017)
  53. Characterization of quasispecies of pandemic 2009 influenza A virus (A/H1N1/2009) by de novo sequencing using a next-generation DNA sequencer. Kuroda M, Katano H, Nakajima N, Tobiume M, Ainai A, Sekizuka T, Hasegawa H, Tashiro M, Sasaki Y, Arakawa Y, Hata S, Watanabe M, Sata T. PLoS One 5 e10256 (2010)
  54. High-throughput profiling of influenza A virus hemagglutinin gene at single-nucleotide resolution. Wu NC, Young AP, Al-Mawsawi LQ, Olson CA, Feng J, Qi H, Chen SH, Lu IH, Lin CY, Chin RG, Luan HH, Nguyen N, Nelson SF, Li X, Wu TT, Sun R. Sci Rep 4 4942 (2014)
  55. How single mutations affect viral escape from broad and narrow antibodies to H1 influenza hemagglutinin. Doud MB, Lee JM, Bloom JD. Nat Commun 9 1386 (2018)
  56. Efficacious recombinant influenza vaccines produced by high yield bacterial expression: a solution to global pandemic and seasonal needs. Song L, Nakaar V, Kavita U, Price A, Huleatt J, Tang J, Jacobs A, Liu G, Huang Y, Desai P, Maksymiuk G, Takahashi V, Umlauf S, Reiserova L, Bell R, Li H, Zhang Y, McDonald WF, Powell TJ, Tussey L. PLoS One 3 e2257 (2008)
  57. Antigenic drift in H5N1 avian influenza virus in poultry is driven by mutations in major antigenic sites of the hemagglutinin molecule analogous to those for human influenza virus. Cattoli G, Milani A, Temperton N, Zecchin B, Buratin A, Molesti E, Aly MM, Arafa A, Capua I. J Virol 85 8718-8724 (2011)
  58. Role of viral hemagglutinin glycosylation in anti-influenza activities of recombinant surfactant protein D. Hartshorn KL, Webby R, White MR, Tecle T, Pan C, Boucher S, Moreland RJ, Crouch EC, Scheule RK. Respir Res 9 65 (2008)
  59. Immunogenicity of chimeric haemagglutinin-based, universal influenza virus vaccine candidates: interim results of a randomised, placebo-controlled, phase 1 clinical trial. Bernstein DI, Guptill J, Naficy A, Nachbagauer R, Berlanda-Scorza F, Feser J, Wilson PC, Solórzano A, Van der Wielen M, Walter EB, Albrecht RA, Buschle KN, Chen YQ, Claeys C, Dickey M, Dugan HL, Ermler ME, Freeman D, Gao M, Gast C, Guthmiller JJ, Hai R, Henry C, Lan LY, McNeal M, Palm AE, Shaw DG, Stamper CT, Sun W, Sutton V, Tepora ME, Wahid R, Wenzel H, Wohlbold TJ, Innis BL, García-Sastre A, Palese P, Krammer F. Lancet Infect Dis 20 80-91 (2020)
  60. Emergence of H274Y oseltamivir-resistant A(H1N1) influenza viruses in Japan during the 2008-2009 season. Baranovich T, Saito R, Suzuki Y, Zaraket H, Dapat C, Caperig-Dapat I, Oguma T, Shabana II, Saito T, Suzuki H, Japanese Influenza Collaborative Study Group. J Clin Virol 47 23-28 (2010)
  61. Genomic signature and mutation trend analysis of pandemic (H1N1) 2009 influenza A virus. Pan C, Cheung B, Tan S, Li C, Li L, Liu S, Jiang S. PLoS One 5 e9549 (2010)
  62. Shotgun glycomics of pig lung identifies natural endogenous receptors for influenza viruses. Byrd-Leotis L, Liu R, Bradley KC, Lasanajak Y, Cummings SF, Song X, Heimburg-Molinaro J, Galloway SE, Culhane MR, Smith DF, Steinhauer DA, Cummings RD. Proc Natl Acad Sci U S A 111 E2241-50 (2014)
  63. Structure of a bimodular botulinum neurotoxin complex provides insights into its oral toxicity. Lee K, Gu S, Jin L, Le TT, Cheng LW, Strotmeier J, Kruel AM, Yao G, Perry K, Rummel A, Jin R. PLoS Pathog 9 e1003690 (2013)
  64. Structural insight into epitopes in the pregnancy-associated malaria protein VAR2CSA. Andersen P, Nielsen MA, Resende M, Rask TS, Dahlbäck M, Theander T, Lund O, Salanti A. PLoS Pathog 4 e42 (2008)
  65. Protective immunity to lethal challenge of the 1918 pandemic influenza virus by vaccination. Kong WP, Hood C, Yang ZY, Wei CJ, Xu L, García-Sastre A, Tumpey TM, Nabel GJ. Proc Natl Acad Sci U S A 103 15987-15991 (2006)
  66. A bivalent influenza VLP vaccine confers complete inhibition of virus replication in lungs. Quan FS, Steinhauer D, Huang C, Ross TM, Compans RW, Kang SM. Vaccine 26 3352-3361 (2008)
  67. Does Glycosylation as a modifier of Original Antigenic Sin explain the case age distribution and unusual toxicity in pandemic novel H1N1 influenza? Reichert T, Chowell G, Nishiura H, Christensen RA, McCullers JA. BMC Infect Dis 10 5 (2010)
  68. Experimental evolution of human influenza virus H3 hemagglutinin in the mouse lung identifies adaptive regions in HA1 and HA2. Keleta L, Ibricevic A, Bovin NV, Brody SL, Brown EG. J Virol 82 11599-11608 (2008)
  69. Receptor-binding properties of swine influenza viruses isolated and propagated in MDCK cells. Gambaryan AS, Karasin AI, Tuzikov AB, Chinarev AA, Pazynina GV, Bovin NV, Matrosovich MN, Olsen CW, Klimov AI. Virus Res 114 15-22 (2005)
  70. Comparison of the receptor binding properties of contemporary swine isolates and early human pandemic H1N1 isolates (Novel 2009 H1N1). Bradley KC, Jones CA, Tompkins SM, Tripp RA, Russell RJ, Gramer MR, Heimburg-Molinaro J, Smith DF, Cummings RD, Steinhauer DA. Virology 413 169-182 (2011)
  71. Effect of D222G mutation in the hemagglutinin protein on receptor binding, pathogenesis and transmissibility of the 2009 pandemic H1N1 influenza virus. Belser JA, Jayaraman A, Raman R, Pappas C, Zeng H, Cox NJ, Katz JM, Sasisekharan R, Tumpey TM. PLoS One 6 e25091 (2011)
  72. Influenza human monoclonal antibody 1F1 interacts with three major antigenic sites and residues mediating human receptor specificity in H1N1 viruses. Tsibane T, Ekiert DC, Krause JC, Martinez O, Crowe JE, Wilson IA, Basler CF. PLoS Pathog 8 e1003067 (2012)
  73. Design of Escherichia coli-expressed stalk domain immunogens of H1N1 hemagglutinin that protect mice from lethal challenge. Bommakanti G, Lu X, Citron MP, Najar TA, Heidecker GJ, ter Meulen J, Varadarajan R, Liang X. J Virol 86 13434-13444 (2012)
  74. Structural determinants for naturally evolving H5N1 hemagglutinin to switch its receptor specificity. Tharakaraman K, Raman R, Viswanathan K, Stebbins NW, Jayaraman A, Krishnan A, Sasisekharan V, Sasisekharan R. Cell 153 1475-1485 (2013)
  75. Colorimetric detection of influenza A virus using antibody-functionalized gold nanoparticles. Liu Y, Zhang L, Wei W, Zhao H, Zhou Z, Zhang Y, Liu S. Analyst 140 3989-3995 (2015)
  76. Effective replication of human influenza viruses in mice lacking a major alpha2,6 sialyltransferase. Glaser L, Conenello G, Paulson J, Palese P. Virus Res 126 9-18 (2007)
  77. Generation, characterization and epitope mapping of two neutralizing and protective human recombinant antibodies against influenza A H5N1 viruses. Sun L, Lu X, Li C, Wang M, Liu Q, Li Z, Hu X, Li J, Liu F, Li Q, Belser JA, Hancock K, Shu Y, Katz JM, Liang M, Li D. PLoS One 4 e5476 (2009)
  78. Binding kinetics of influenza viruses to sialic acid-containing carbohydrates. Hidari KI, Shimada S, Suzuki Y, Suzuki T. Glycoconj J 24 583-590 (2007)
  79. Letter Extrapolating from sequence--the 2009 H1N1 'swine' influenza virus. Soundararajan V, Tharakaraman K, Raman R, Raguram S, Shriver Z, Sasisekharan V, Sasisekharan R. Nat Biotechnol 27 510-513 (2009)
  80. Receptor binding by H10 influenza viruses. Vachieri SG, Xiong X, Collins PJ, Walker PA, Martin SR, Haire LF, Zhang Y, McCauley JW, Gamblin SJ, Skehel JJ. Nature 511 475-477 (2014)
  81. Structural basis for receptor specificity of influenza B virus hemagglutinin. Wang Q, Tian X, Chen X, Ma J. Proc Natl Acad Sci U S A 104 16874-16879 (2007)
  82. Antiviral activity of aloe-emodin against influenza A virus via galectin-3 up-regulation. Li SW, Yang TC, Lai CC, Huang SH, Liao JM, Wan L, Lin YJ, Lin CW. Eur J Pharmacol 738 125-132 (2014)
  83. Distinct Roles for Sialoside and Protein Receptors in Coronavirus Infection. Qing E, Hantak M, Perlman S, Gallagher T. mBio 11 e02764-19 (2020)
  84. Evolutionary trends of A(H1N1) influenza virus hemagglutinin since 1918. Shen J, Ma J, Wang Q. PLoS One 4 e7789 (2009)
  85. The hemagglutinin structure of an avian H1N1 influenza A virus. Lin T, Wang G, Li A, Zhang Q, Wu C, Zhang R, Cai Q, Song W, Yuen KY. Virology 392 73-81 (2009)
  86. Viral factors in influenza pandemic risk assessment. Lipsitch M, Barclay W, Raman R, Russell CJ, Belser JA, Cobey S, Kasson PM, Lloyd-Smith JO, Maurer-Stroh S, Riley S, Beauchemin CA, Bedford T, Friedrich TC, Handel A, Herfst S, Murcia PR, Roche B, Wilke CO, Russell CA. Elife 5 e18491 (2016)
  87. Receptor specificity of subtype H1 influenza A viruses isolated from swine and humans in the United States. Chen LM, Rivailler P, Hossain J, Carney P, Balish A, Perry I, Davis CT, Garten R, Shu B, Xu X, Klimov A, Paulson JC, Cox NJ, Swenson S, Stevens J, Vincent A, Gramer M, Donis RO. Virology 412 401-410 (2011)
  88. Genome-wide identification of interferon-sensitive mutations enables influenza vaccine design. Du Y, Xin L, Shi Y, Zhang TH, Wu NC, Dai L, Gong D, Brar G, Shu S, Luo J, Reiley W, Tseng YW, Bai H, Wu TT, Wang J, Shu Y, Sun R. Science 359 290-296 (2018)
  89. Host-selected amino acid changes at the sialic acid binding pocket of the parvovirus capsid modulate cell binding affinity and determine virulence. López-Bueno A, López-Bueno A, Rubio MP, Bryant N, McKenna R, Agbandje-McKenna M, Almendral JM. J Virol 80 1563-1573 (2006)
  90. Three-dimensional structure of the bacteriophage P22 tail machine. Tang L, Marion WR, Cingolani G, Prevelige PE, Johnson JE. EMBO J 24 2087-2095 (2005)
  91. Crystal structure of the human astrovirus capsid spike. Dong J, Dong L, Méndez E, Tao Y. Proc Natl Acad Sci U S A 108 12681-12686 (2011)
  92. Only two residues are responsible for the dramatic difference in receptor binding between swine and new pandemic H1 hemagglutinin. de Vries RP, de Vries E, Moore KS, Rigter A, Rottier PJ, de Haan CA. J Biol Chem 286 5868-5875 (2011)
  93. Salivary agglutinin and lung scavenger receptor cysteine-rich glycoprotein 340 have broad anti-influenza activities and interactions with surfactant protein D that vary according to donor source and sialylation. Hartshorn KL, Ligtenberg A, White MR, Van Eijk M, Hartshorn M, Pemberton L, Holmskov U, Crouch E. Biochem J 393 545-553 (2006)
  94. Distinct glycan topology for avian and human sialopentasaccharide receptor analogues upon binding different hemagglutinins: a molecular dynamics perspective. Xu D, Newhouse EI, Amaro RE, Pao HC, Cheng LS, Markwick PR, McCammon JA, Li WW, Arzberger PW. J Mol Biol 387 465-491 (2009)
  95. An unexpected antibody response to an engineered influenza virus modifies CD8+ T cell responses. Thomas PG, Brown SA, Yue W, So J, Webby RJ, Doherty PC. Proc Natl Acad Sci U S A 103 2764-2769 (2006)
  96. Determining the structure of an unliganded and fully glycosylated SIV gp120 envelope glycoprotein. Chen B, Vogan EM, Gong H, Skehel JJ, Wiley DC, Harrison SC. Structure 13 197-211 (2005)
  97. The relevance of salt bridges for the stability of the influenza virus hemagglutinin. Rachakonda PS, Veit M, Korte T, Ludwig K, Böttcher C, Huang Q, Schmidt MF, Herrmann A. FASEB J 21 995-1002 (2007)
  98. Universal influenza B vaccine based on the maturational cleavage site of the hemagglutinin precursor. Bianchi E, Liang X, Ingallinella P, Finotto M, Chastain MA, Fan J, Fu TM, Song HC, Horton MS, Freed DC, Manger W, Wen E, Shi L, Ionescu R, Price C, Wenger M, Emini EA, Cortese R, Ciliberto G, Shiver JW, Pessi A. J Virol 79 7380-7388 (2005)
  99. Inferring stabilizing mutations from protein phylogenies: application to influenza hemagglutinin. Bloom JD, Glassman MJ. PLoS Comput Biol 5 e1000349 (2009)
  100. Structure and receptor complexes of the hemagglutinin from a highly pathogenic H7N7 influenza virus. Yang H, Carney PJ, Donis RO, Stevens J. J Virol 86 8645-8652 (2012)
  101. Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution. Zhang W, Shi Y, Qi J, Gao F, Li Q, Fan Z, Yan J, Gao GF. J Virol 87 5949-5958 (2013)
  102. Analysis of influenza virus hemagglutinin receptor binding mutants with limited receptor recognition properties and conditional replication characteristics. Bradley KC, Galloway SE, Lasanajak Y, Song X, Heimburg-Molinaro J, Yu H, Chen X, Talekar GR, Smith DF, Cummings RD, Steinhauer DA. J Virol 85 12387-12398 (2011)
  103. Loss of a single N-linked glycan from the hemagglutinin of influenza virus is associated with resistance to collectins and increased virulence in mice. Reading PC, Pickett DL, Tate MD, Whitney PG, Job ER, Brooks AG. Respir Res 10 117 (2009)
  104. A human-infecting H10N8 influenza virus retains a strong preference for avian-type receptors. Zhang H, de Vries RP, Tzarum N, Zhu X, Yu W, McBride R, Paulson JC, Wilson IA. Cell Host Microbe 17 377-384 (2015)
  105. Amino acid changes in hemagglutinin contribute to the replication of oseltamivir-resistant H1N1 influenza viruses. Ginting TE, Shinya K, Kyan Y, Makino A, Matsumoto N, Kaneda S, Kawaoka Y. J Virol 86 121-127 (2012)
  106. Genetic requirement for hemagglutinin glycosylation and its implications for influenza A H1N1 virus evolution. Kim JI, Lee I, Park S, Hwang MW, Bae JY, Lee S, Heo J, Park MS, García-Sastre A, Park MS. J Virol 87 7539-7549 (2013)
  107. Microevolution of canine influenza virus in shelters and its molecular epidemiology in the United States. Hayward JJ, Dubovi EJ, Scarlett JM, Janeczko S, Holmes EC, Parrish CR. J Virol 84 12636-12645 (2010)
  108. Single-step multiplex reverse transcription-polymerase chain reaction (RT-PCR) for influenza A virus subtype H5N1 detection. Payungporn S, Phakdeewirot P, Chutinimitkul S, Theamboonlers A, Keawcharoen J, Oraveerakul K, Amonsin A, Poovorawan Y. Viral Immunol 17 588-593 (2004)
  109. Altered receptor specificity and fusion activity of the haemagglutinin contribute to high virulence of a mouse-adapted influenza A virus. Koerner I, Matrosovich MN, Haller O, Staeheli P, Kochs G. J Gen Virol 93 970-979 (2012)
  110. Chimeric influenza virus hemagglutinin proteins containing large domains of the Bacillus anthracis protective antigen: protein characterization, incorporation into infectious influenza viruses, and antigenicity. Li ZN, Mueller SN, Ye L, Bu Z, Yang C, Ahmed R, Steinhauer DA. J Virol 79 10003-10012 (2005)
  111. Antigenic and genetic evolution of contemporary swine H1 influenza viruses in the United States. Rajao DS, Anderson TK, Kitikoon P, Stratton J, Lewis NS, Vincent AL. Virology 518 45-54 (2018)
  112. Diversity of Functionally Permissive Sequences in the Receptor-Binding Site of Influenza Hemagglutinin. Wu NC, Xie J, Zheng T, Nycholat CM, Grande G, Paulson JC, Lerner RA, Wilson IA. Cell Host Microbe 21 742-753.e8 (2017)
  113. Free energy simulations reveal a double mutant avian H5N1 virus hemagglutinin with altered receptor binding specificity. Das P, Li J, Royyuru AK, Zhou R. J Comput Chem 30 1654-1663 (2009)
  114. Genetic characterization of subtype H1 avian influenza viruses isolated from live poultry markets in Zhejiang Province, China, in 2011. Wu HB, Guo CT, Lu RF, Xu LH, Wo EK, You JB, Wang YT, Wang QG, Wu NP. Virus Genes 44 441-449 (2012)
  115. High performance screening, structural and molecular dynamics analysis to identify H1 inhibitors from TCM Database@Taiwan. Chang SS, Huang HJ, Chen CY. Mol Biosyst 7 3366-3374 (2011)
  116. Structure and binding analysis of Polyporus squamosus lectin in complex with the Neu5Ac{alpha}2-6Gal{beta}1-4GlcNAc human-type influenza receptor. Kadirvelraj R, Grant OC, Goldstein IJ, Winter HC, Tateno H, Fadda E, Woods RJ. Glycobiology 21 973-984 (2011)
  117. Atomic-resolution conformational analysis of the GM3 ganglioside in a lipid bilayer and its implications for ganglioside-protein recognition at membrane surfaces. DeMarco ML, Woods RJ. Glycobiology 19 344-355 (2009)
  118. Receptor binding profiles of avian influenza virus hemagglutinin subtypes on human cells as a predictor of pandemic potential. Shelton H, Ayora-Talavera G, Ren J, Loureiro S, Pickles RJ, Barclay WS, Jones IM. J Virol 85 1875-1880 (2011)
  119. Alterations in receptor-binding properties of swine influenza viruses of the H1 subtype after isolation in embryonated chicken eggs. Takemae N, Ruttanapumma R, Parchariyanon S, Yoneyama S, Hayashi T, Hiramatsu H, Sriwilaijaroen N, Uchida Y, Kondo S, Yagi H, Kato K, Suzuki Y, Saito T. J Gen Virol 91 938-948 (2010)
  120. Bayesian biclustering of gene expression data. Gu J, Liu JS. BMC Genomics 9 Suppl 1 S4 (2008)
  121. Molecular Characterizations of Surface Proteins Hemagglutinin and Neuraminidase from Recent H5Nx Avian Influenza Viruses. Yang H, Carney PJ, Mishin VP, Guo Z, Chang JC, Wentworth DE, Gubareva LV, Stevens J. J Virol 90 5770-5784 (2016)
  122. Protein intrinsic disorder toolbox for comparative analysis of viral proteins. Goh GK, Dunker AK, Uversky VN. BMC Genomics 9 Suppl 2 S4 (2008)
  123. Synergic effect of curcumin and its structural analogue (Monoacetylcurcumin) on anti-influenza virus infection. Richart SM, Li YL, Mizushina Y, Chang YY, Chung TY, Chen GH, Tzen JT, Shia KS, Hsu WL. J Food Drug Anal 26 1015-1023 (2018)
  124. Insights into avian influenza virus pathogenicity: the hemagglutinin precursor HA0 of subtype H16 has an alpha-helix structure in its cleavage site with inefficient HA1/HA2 cleavage. Lu X, Shi Y, Gao F, Xiao H, Wang M, Qi J, Gao GF. J Virol 86 12861-12870 (2012)
  125. Recent evolution of equine influenza and the origin of canine influenza. Collins PJ, Vachieri SG, Haire LF, Ogrodowicz RW, Martin SR, Walker PA, Xiong X, Gamblin SJ, Skehel JJ. Proc Natl Acad Sci U S A 111 11175-11180 (2014)
  126. Comparison of selection pressures on the HA gene of pandemic (2009) and seasonal human and swine influenza A H1 subtype viruses. Furuse Y, Shimabukuro K, Odagiri T, Sawayama R, Okada T, Khandaker I, Suzuki A, Oshitani H. Virology 405 314-321 (2010)
  127. Identification of Low- and High-Impact Hemagglutinin Amino Acid Substitutions That Drive Antigenic Drift of Influenza A(H1N1) Viruses. Harvey WT, Benton DJ, Gregory V, Hall JP, Daniels RS, Bedford T, Haydon DT, Hay AJ, McCauley JW, Reeve R. PLoS Pathog 12 e1005526 (2016)
  128. Impact of host cell line adaptation on quasispecies composition and glycosylation of influenza A virus hemagglutinin. Roedig JV, Rapp E, Höper D, Genzel Y, Reichl U. PLoS One 6 e27989 (2011)
  129. Binding of influenza viruses to sialic acids: reassortant viruses with A/NWS/33 hemagglutinin bind to alpha2,8-linked sialic acid. Wu W, Air GM. Virology 325 340-350 (2004)
  130. Adaptation of avian influenza A (H6N1) virus from avian to human receptor-binding preference. Wang F, Qi J, Bi Y, Zhang W, Wang M, Zhang B, Wang M, Liu J, Yan J, Shi Y, Gao GF. EMBO J 34 1661-1673 (2015)
  131. Determination of receptor specificities for whole influenza viruses using multivalent glycan arrays. Huang ML, Cohen M, Fisher CJ, Schooley RT, Gagneux P, Godula K. Chem Commun (Camb) 51 5326-5329 (2015)
  132. Influenza A virus hemagglutinin trimerization completes monomer folding and antigenicity. Magadán JG, Khurana S, Das SR, Frank GM, Stevens J, Golding H, Bennink JR, Yewdell JW. J Virol 87 9742-9753 (2013)
  133. Mutation tryptophan to leucine at position 222 of haemagglutinin could facilitate H3N2 influenza A virus infection in dogs. Yang G, Li S, Blackmon S, Ye J, Bradley KC, Cooley J, Smith D, Hanson L, Cardona C, Steinhauer DA, Webby R, Liao M, Wan XF. J Gen Virol 94 2599-2608 (2013)
  134. Aminoadamantanes with persistent in vitro efficacy against H1N1 (2009) influenza A. Kolocouris A, Tzitzoglaki C, Johnson FB, Zell R, Wright AK, Cross TA, Tietjen I, Fedida D, Busath DD. J Med Chem 57 4629-4639 (2014)
  135. Binding of DC-SIGN to the hemagglutinin of influenza A viruses supports virus replication in DC-SIGN expressing cells. Hillaire ML, Nieuwkoop NJ, Boon AC, de Mutsert G, Vogelzang-van Trierum SE, Fouchier RA, Osterhaus AD, Rimmelzwaan GF. PLoS One 8 e56164 (2013)
  136. Glycomics-based analysis of chicken red blood cells provides insight into the selectivity of the viral agglutination assay. Aich U, Beckley N, Shriver Z, Raman R, Viswanathan K, Hobbie S, Sasisekharan R. FEBS J 278 1699-1712 (2011)
  137. Linker and/or transmembrane regions of influenza A/Group-1, A/Group-2, and type B virus hemagglutinins are packed differently within trimers. Kordyukova LV, Serebryakova MV, Polyansky AA, Kropotkina EA, Alexeevski AV, Veit M, Efremov RG, Filippova IY, Baratova LA. Biochim Biophys Acta 1808 1843-1854 (2011)
  138. Prediction of biological functions on glycosylation site migrations in human influenza H1N1 viruses. Sun S, Wang Q, Zhao F, Chen W, Li Z. PLoS One 7 e32119 (2012)
  139. Accurate prediction of cellular co-translational folding indicates proteins can switch from post- to co-translational folding. Nissley DA, Sharma AK, Ahmed N, Friedrich UA, Kramer G, Bukau B, O'Brien EP. Nat Commun 7 10341 (2016)
  140. Bacterially produced recombinant influenza vaccines based on virus-like particles. Jegerlehner A, Zabel F, Langer A, Dietmeier K, Jennings GT, Saudan P, Bachmann MF. PLoS One 8 e78947 (2013)
  141. Identification of amino acid changes that may have been critical for the genesis of A(H7N9) influenza viruses. Neumann G, Macken CA, Kawaoka Y. J Virol 88 4877-4896 (2014)
  142. The Cranberry Extract Oximacro® Exerts in vitro Virucidal Activity Against Influenza Virus by Interfering With Hemagglutinin. Luganini A, Terlizzi ME, Catucci G, Gilardi G, Maffei ME, Gribaudo G. Front Microbiol 9 1826 (2018)
  143. Theoretical analysis of binding specificity of influenza viral hemagglutinin to avian and human receptors based on the fragment molecular orbital method. Iwata T, Fukuzawa K, Nakajima K, Aida-Hyugaji S, Mochizuki Y, Watanabe H, Tanaka S. Comput Biol Chem 32 198-211 (2008)
  144. In silico characterization of the functional and structural modules of the hemagglutinin protein from the swine-origin influenza virus A (H1N1)-2009. Sun Y, Shi Y, Zhang W, Li Q, Liu D, Vavricka C, Yan J, Gao GF. Sci China Life Sci 53 633-642 (2010)
  145. Scientific lessons from the first influenza pandemic of the 20th century. Oxford JS, Lambkin R, Elliot A, Daniels R, Sefton A, Gill D. Vaccine 24 6742-6746 (2006)
  146. Structural vaccinology: structure-based design of influenza A virus hemagglutinin subtype-specific subunit vaccines. Xuan C, Shi Y, Qi J, Zhang W, Xiao H, Gao GF. Protein Cell 2 997-1005 (2011)
  147. Characterization of triple reassortant H1N1 influenza A viruses from swine in Ohio. Yassine HM, Khatri M, Zhang YJ, Lee CW, Byrum BA, O'Quin J, Smith KA, Saif YM. Vet Microbiol 139 132-139 (2009)
  148. Crystal structure of the avian astrovirus capsid spike. DuBois RM, Freiden P, Marvin S, Reddivari M, Heath RJ, White SW, Schultz-Cherry S. J Virol 87 7853-7863 (2013)
  149. Informed consent and public health. O'Neill O. Philos Trans R Soc Lond B Biol Sci 359 1133-1136 (2004)
  150. Selective detections of single-viruses using solid-state nanopores. Arima A, Tsutsui M, Harlisa IH, Yoshida T, Tanaka M, Yokota K, Tonomura W, Taniguchi M, Okochi M, Washio T, Kawai T. Sci Rep 8 16305 (2018)
  151. Spiromastilactones: A new class of influenza virus inhibitors from deep-sea fungus. Niu S, Si L, Liu D, Zhou A, Zhang Z, Shao Z, Wang S, Zhang L, Zhou D, Lin W. Eur J Med Chem 108 229-244 (2016)
  152. In vitro responses to avian influenza H5 by human CD4 T cells. Cusick MF, Wang S, Eckels DD. J Immunol 183 6432-6441 (2009)
  153. Intracytoplasmic trapping of influenza virus by a lipophilic derivative of aglycoristocetin. Vanderlinden E, Vanstreels E, Boons E, ter Veer W, Huckriede A, Daelemans D, Van Lommel A, Rőth E, Sztaricskai F, Herczegh P, Naesens L. J Virol 86 9416-9431 (2012)
  154. Lessons learned from reconstructing the 1918 influenza pandemic. Garcia-Sastre A, Whitley RJ. J Infect Dis 194 Suppl 2 S127-32 (2006)
  155. A broad spectrum, one-step reverse-transcription PCR amplification of the neuraminidase gene from multiple subtypes of influenza A virus. Alvarez AC, Brunck ME, Boyd V, Lai R, Virtue E, Chen W, Bletchly C, Heine HG, Barnard R. Virol J 5 77 (2008)
  156. A mutation in the receptor binding site enhances infectivity of 2009 H1N1 influenza hemagglutinin pseudotypes without changing antigenicity. Wang W, Castelán-Vega JA, Jiménez-Alberto A, Vassell R, Ye Z, Weiss CD. Virology 407 374-380 (2010)
  157. Glycosylation of Hemagglutinin and Neuraminidase of Influenza A Virus as Signature for Ecological Spillover and Adaptation among Influenza Reservoirs. Kim P, Jang YH, Kwon SB, Lee CM, Han G, Seong BL. Viruses 10 E183 (2018)
  158. Mass spectrometric sequencing and acylation character analysis of C-terminal anchoring segment from Influenza A hemagglutinin. Serebryakova MV, Kordyukova LV, Baratova LA, Markushin SG. Eur J Mass Spectrom (Chichester) 12 51-62 (2006)
  159. Mutations to PB2 and NP proteins of an avian influenza virus combine to confer efficient growth in primary human respiratory cells. Danzy S, Studdard LR, Manicassamy B, Solorzano A, Marshall N, García-Sastre A, Steel J, Lowen AC. J Virol 88 13436-13446 (2014)
  160. A naturally protective epitope of limited variability as an influenza vaccine target. Thompson CP, Lourenço J, Walters AA, Obolski U, Edmans M, Palmer DS, Kooblall K, Carnell GW, O'Connor D, Bowden TA, Pybus OG, Pollard AJ, Temperton NJ, Lambe T, Gilbert SC, Gupta S. Nat Commun 9 3859 (2018)
  161. Fluorescent Trimeric Hemagglutinins Reveal Multivalent Receptor Binding Properties. Nemanichvili N, Tomris I, Turner HL, McBride R, Grant OC, van der Woude R, Aldosari MH, Pieters RJ, Woods RJ, Paulson JC, Boons GJ, Ward AB, Verheije MH, de Vries RP. J Mol Biol 431 842-856 (2019)
  162. Infectivity studies of influenza virus hemagglutinin receptor binding site mutants in mice. Meisner J, Szretter KJ, Bradley KC, Langley WA, Li ZN, Lee BJ, Thoennes S, Martin J, Skehel JJ, Russell RJ, Katz JM, Steinhauer DA. J Virol 82 5079-5083 (2008)
  163. Reassortment between seasonal and swine-origin H1N1 influenza viruses generates viruses with enhanced growth capability in cell culture. Octaviani CP, Li C, Noda T, Kawaoka Y. Virus Res 156 147-150 (2011)
  164. Reconstituted B cell receptor signaling reveals carbohydrate-dependent mode of activation. Villar RF, Patel J, Weaver GC, Kanekiyo M, Wheatley AK, Yassine HM, Costello CE, Chandler KB, McTamney PM, Nabel GJ, McDermott AB, Mascola JR, Carr SA, Lingwood D. Sci Rep 6 36298 (2016)
  165. Substrate Binding by the Second Sialic Acid-Binding Site of Influenza A Virus N1 Neuraminidase Contributes to Enzymatic Activity. Du W, Dai M, Li Z, Boons GJ, Peeters B, van Kuppeveld FJM, de Vries E, de Haan CAM. J Virol 92 e01243-18 (2018)
  166. An immuno-assay to quantify influenza virus hemagglutinin with correctly folded stalk domains in vaccine preparations. Rajendran M, Sun W, Comella P, Nachbagauer R, Wohlbold TJ, Amanat F, Kirkpatrick E, Palese P, Krammer F. PLoS One 13 e0194830 (2018)
  167. Context-specific target definition in influenza a virus hemagglutinin-glycan receptor interactions. Shriver Z, Raman R, Viswanathan K, Sasisekharan R. Chem Biol 16 803-814 (2009)
  168. Free-energy simulations reveal that both hydrophobic and polar interactions are important for influenza hemagglutinin antibody binding. Xia Z, Huynh T, Kang SG, Zhou R. Biophys J 102 1453-1461 (2012)
  169. Insight into structural diversity of influenza virus haemagglutinin. Cho KJ, Lee JH, Hong KW, Kim SH, Park Y, Lee JY, Kang S, Kim S, Yang JH, Kim EK, Seok JH, Unzai S, Park SY, Saelens X, Kim CJ, Lee JY, Kang C, Oh HB, Chung MS, Kim KH. J Gen Virol 94 1712-1722 (2013)
  170. Molecular characterization of H6 subtype influenza viruses in southern China from 2009 to 2011. Zou S, Gao R, Zhang Y, Li X, Chen W, Bai T, Dong L, Wang D, Shu Y. Emerg Microbes Infect 5 e73 (2016)
  171. Residue Y161 of influenza virus hemagglutinin is involved in viral recognition of sialylated complexes from different hosts. Wang M, Tscherne DM, McCullough C, Caffrey M, García-Sastre A, Rong L. J Virol 86 4455-4462 (2012)
  172. Structural and Functional Studies of Influenza Virus A/H6 Hemagglutinin. Ni F, Kondrashkina E, Wang Q. PLoS One 10 e0134576 (2015)
  173. Combining molecular dynamics with bayesian analysis to predict and evaluate ligand-binding mutations in influenza hemagglutinin. Kasson PM, Ensign DL, Pande VS. J Am Chem Soc 131 11338-11340 (2009)
  174. Inhibition of influenza hemagglutinin with the antiviral inhibitor arbidol using a proteomics based approach and mass spectrometry. Nasser ZH, Swaminathan K, Müller P, Downard KM. Antiviral Res 100 399-406 (2013)
  175. Reduced susceptibility to all neuraminidase inhibitors of influenza H1N1 viruses with haemagglutinin mutations and mutations in non-conserved residues of the neuraminidase. McKimm-Breschkin JL, Williams J, Barrett S, Jachno K, McDonald M, Mohr PG, Saito T, Tashiro M. J Antimicrob Chemother 68 2210-2221 (2013)
  176. Sialic acid on herpes simplex virus type 1 envelope glycoproteins is required for efficient infection of cells. Teuton JR, Brandt CR. J Virol 81 3731-3739 (2007)
  177. Antigenicity of a type A influenza virus through comparison of hemagglutination inhibition and mass spectrometry immunoassays. Schwahn AB, Downard KM. J Immunoassay Immunochem 30 245-261 (2009)
  178. Conformational change of influenza virus hemagglutinin is sensitive to ionic concentration. Korte T, Ludwig K, Huang Q, Rachakonda PS, Herrmann A. Eur Biophys J 36 327-335 (2007)
  179. Enhanced human receptor binding by H5 haemagglutinins. Xiong X, Xiao H, Martin SR, Coombs PJ, Liu J, Collins PJ, Vachieri SG, Walker PA, Lin YP, McCauley JW, Gamblin SJ, Skehel JJ. Virology 456-457 179-187 (2014)
  180. Epidemiological and genetic characterization of pH1N1 and H3N2 influenza viruses circulated in MENA region during 2009-2017. Al Khatib HA, Al Thani AA, Gallouzi I, Yassine HM. BMC Infect Dis 19 314 (2019)
  181. Large-scale sequence analysis of hemagglutinin of influenza A virus identifies conserved regions suitable for targeting an anti-viral response. Sahini L, Tempczyk-Russell A, Agarwal R. PLoS One 5 e9268 (2010)
  182. Mutation W222L at the Receptor Binding Site of Hemagglutinin Could Facilitate Viral Adaption from Equine Influenza A(H3N8) Virus to Dogs. Wen F, Blackmon S, Olivier AK, Li L, Guan M, Sun H, Wang PG, Wan XF. J Virol 92 e01115-18 (2018)
  183. Mutations at positions 186 and 194 in the HA gene of the 2009 H1N1 pandemic influenza virus improve replication in cell culture and eggs. Suphaphiphat P, Franti M, Hekele A, Lilja A, Spencer T, Settembre E, Palmer G, Crotta S, Tuccino AB, Keiner B, Trusheim H, Balabanis K, Sackal M, Rothfeder M, Mandl CW, Dormitzer PR, Mason PW. Virol J 7 157 (2010)
  184. The receptor preference of influenza viruses. Meng B, Marriott AC, Dimmock NJ. Influenza Other Respir Viruses 4 147-153 (2010)
  185. Using a mutual information-based site transition network to map the genetic evolution of influenza A/H3N2 virus. Xia Z, Jin G, Zhu J, Zhou R. Bioinformatics 25 2309-2317 (2009)
  186. Human (α2→6) and avian (α2→3) sialylated receptors of influenza A virus show distinct conformations and dynamics in solution. Sassaki GL, Elli S, Rudd TR, Macchi E, Yates EA, Naggi A, Shriver Z, Raman R, Sasisekharan R, Torri G, Guerrini M. Biochemistry 52 7217-7230 (2013)
  187. Role of the viral hemagglutinin in the anti-influenza virus activity of newly synthesized polycyclic amine compounds. Torres E, Duque MD, Vanderlinden E, Ma C, Pinto LH, Camps P, Froeyen M, Vázquez S, Naesens L. Antiviral Res 99 281-291 (2013)
  188. The Influenza B Virus Hemagglutinin Head Domain Is Less Tolerant to Transposon Mutagenesis than That of the Influenza A Virus. Fulton BO, Sun W, Heaton NS, Palese P. J Virol 92 e00754-18 (2018)
  189. Energetics of the loop-to-helix transition leading to the coiled-coil structure of influenza virus hemagglutinin HA2 subunits. Huang Q, Korte T, Rachakonda PS, Knapp EW, Herrmann A. Proteins 74 291-303 (2009)
  190. Extending the Stalk Enhances Immunogenicity of the Influenza Virus Neuraminidase. Broecker F, Zheng A, Suntronwong N, Sun W, Bailey MJ, Krammer F, Palese P. J Virol 93 e00840-19 (2019)
  191. Intermonomer Interactions in Hemagglutinin Subunits HA1 and HA2 Affecting Hemagglutinin Stability and Influenza Virus Infectivity. Wang W, DeFeo CJ, Alvarado-Facundo E, Vassell R, Weiss CD. J Virol 89 10602-10611 (2015)
  192. Zanamivir: an influenza virus neuraminidase inhibitor. Colman PM. Expert Rev Anti Infect Ther 3 191-199 (2005)
  193. Exploration of binding and inhibition mechanism of a small molecule inhibitor of influenza virus H1N1 hemagglutinin by molecular dynamics simulation. Guan S, Wang T, Kuai Z, Qian M, Tian X, Zhang X, Yu Y, Wang S, Zhang H, Li H, Kong W, Shan Y. Sci Rep 7 3786 (2017)
  194. Illuminating the switch in influenza viruses. Bewley CA. Nat Biotechnol 26 60-62 (2008)
  195. Influenza a virus entry: implications in virulence and future therapeutics. Rumschlag-Booms E, Rong L. Adv Virol 2013 121924 (2013)
  196. Mutations in the Hemagglutinin Stalk Domain Do Not Permit Escape from a Protective, Stalk-Based Vaccine-Induced Immune Response in the Mouse Model. Roubidoux EK, Carreño JM, McMahon M, Jiang K, van Bakel H, Wilson P, Krammer F. mBio 12 e03617-20 (2021)
  197. Neuraminidase inhibitor susceptibility of swine influenza A viruses isolated in Germany between 1981 and 2008. Bauer K, Dürrwald R, Schlegel M, Pfarr K, Topf D, Wiesener N, Dahse HM, Wutzler P, Schmidtke M. Med Microbiol Immunol 201 61-72 (2012)
  198. The pandemic 2009 (H1N1) swine influenza virus is mild compared to the pandemic 1918 (H1N1) virus because of a proline-to-serine substitution in the receptor-binding site of its hemagglutinin - a hypothesis. Padlan EA. Med Hypotheses 74 240-241 (2010)
  199. Broadly neutralizing DNA vaccine with specific mutation alters the antigenicity and sugar-binding activities of influenza hemagglutinin. Chen MW, Liao HY, Huang Y, Jan JT, Huang CC, Ren CT, Wu CY, Cheng TJ, Ho DD, Wong CH. Proc Natl Acad Sci U S A 108 3510-3515 (2011)
  200. Enhanced ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin. Phillips AM, Doud MB, Gonzalez LO, Butty VL, Lin YS, Bloom JD, Shoulders MD. Elife 7 e38795 (2018)
  201. Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals. Herfst S, Zhang J, Richard M, McBride R, Lexmond P, Bestebroer TM, Spronken MIJ, de Meulder D, van den Brand JM, Rosu ME, Martin SR, Gamblin SJ, Xiong X, Peng W, Bodewes R, van der Vries E, Osterhaus ADME, Paulson JC, Skehel JJ, Fouchier RAM. Cell Host Microbe 28 602-613.e7 (2020)
  202. Comment Influenza: Pathways to human adaptation. Steinhauer DA. Nature 499 412-413 (2013)
  203. Label-Free Spectroscopic SARS-CoV-2 Detection on Versatile Nanoimprinted Substrates. Paria D, Kwok KS, Raj P, Zheng P, Gracias DH, Barman I. Nano Lett 22 3620-3627 (2022)
  204. Molecular characterization and comparative analysis of pandemic H1N1/2009 strains with co-circulating seasonal H1N1/2009 strains from eastern India. Sarkar M, Agrawal AS, Sharma Dey R, Chattopadhyay S, Mullick R, De P, Chakrabarti S, Chawla-Sarkar M. Arch Virol 156 207-217 (2011)
  205. Monoclonal antibodies specific for discontinuous epitopes direct refolding of influenza A virus hemagglutinin. Yewdell JW. Mol Immunol 47 1132-1136 (2010)
  206. Pathogenicity and transmission of a swine influenza A(H6N6) virus. Sun H, Kaplan BS, Guan M, Zhang G, Ye J, Long LP, Blackmon S, Yang CK, Chiang MJ, Xie H, Zhao N, Cooley J, Smith DF, Liao M, Cardona C, Li L, Wang GP, Webby R, Wan XF. Emerg Microbes Infect 6 e17 (2017)
  207. Targeted disruption of influenza A virus hemagglutinin in genetically modified mice reduces viral replication and improves disease outcome. Wang S, Chen C, Yang Z, Chi X, Zhang J, Chen JL. Sci Rep 6 23746 (2016)
  208. Theoretical investigation on the binding specificity of sialyldisaccharides with hemagglutinins of influenza A virus by molecular dynamics simulations. Priyadarzini TR, Selvin JF, Gromiha MM, Fukui K, Veluraja K. J Biol Chem 287 34547-34557 (2012)
  209. Chemoenzymatic synthesis of α2-3-sialylated carbohydrate epitopes. Shengshu H, Hai Y, Xi C. Sci China Chem 54 117-128 (2011)
  210. Comparative structural analysis of haemagglutinin proteins from type A influenza viruses: conserved and variable features. Righetto I, Milani A, Cattoli G, Filippini F. BMC Bioinformatics 15 363 (2014)
  211. Different evolutionary trends of swine H1N2 influenza viruses in Italy compared to European viruses. Moreno A, Gabanelli E, Sozzi E, Lelli D, Chiapponi C, Ciccozzi M, Zehender G, Cordioli P. Vet Res 44 112 (2013)
  212. HA-pseudotyped retroviral vectors for influenza antagonist screening. Wang SY, Su CY, Lin M, Huang SY, Huang WI, Wang CC, Wu YT, Cheng TJ, Yu HM, Ren CT, Wu CY, Wong CH, Cheng YS. J Biomol Screen 14 294-302 (2009)
  213. Influenza virus surveillance using surface plasmon resonance. Suenaga E, Mizuno H, Kumar PK. Virulence 3 464-470 (2012)
  214. Melaleuca alternifolia concentrate inhibits in vitro entry of influenza virus into host cells. Li X, Duan S, Chu C, Xu J, Zeng G, Lam AK, Zhou J, Yin Y, Fang D, Reynolds MJ, Gu H, Jiang L. Molecules 18 9550-9566 (2013)
  215. Molecular mechanism of the enhanced virulence of 2009 pandemic influenza A (H1N1) virus from D222G mutation in the hemagglutinin: a molecular modeling study. Pan D, Xue W, Wang X, Guo J, Liu H, Yao X. J Mol Model 18 4355-4366 (2012)
  216. Association analyses of large-scale glycan microarray data reveal novel host-specific substructures in influenza A virus binding glycans. Zhao N, Martin BE, Yang CK, Luo F, Wan XF. Sci Rep 5 15778 (2015)
  217. Clinical and molecular characteristics of the 2009 pandemic influenza H1N1 infection with severe or fatal disease from 2009 to 2011 in Shenzhen, China. Wu C, Cheng X, Wang X, Lv X, Yang F, Liu T, Fang S, Zhang R, Jinquan C. J Med Virol 85 405-412 (2013)
  218. How a plant lectin recognizes high mannose oligosaccharides. Garcia-Pino A, Buts L, Wyns L, Imberty A, Loris R. Plant Physiol 144 1733-1741 (2007)
  219. Plasticity of Amino Acid Residue 145 Near the Receptor Binding Site of H3 Swine Influenza A Viruses and Its Impact on Receptor Binding and Antibody Recognition. Santos JJS, Abente EJ, Obadan AO, Thompson AJ, Ferreri L, Geiger G, Gonzalez-Reiche AS, Lewis NS, Burke DF, Rajão DS, Paulson JC, Vincent AL, Perez DR. J Virol 93 e01413-18 (2019)
  220. Polymer-Stabilized Sialylated Nanoparticles: Synthesis, Optimization, and Differential Binding to Influenza Hemagglutinins. Richards SJ, Baker AN, Walker M, Gibson MI. Biomacromolecules 21 1604-1612 (2020)
  221. Prediction of avian influenza A binding preference to human receptor using conformational analysis of receptor bound to hemagglutinin. Jongkon N, Mokmak W, Chuakheaw D, Shaw PJ, Tongsima S, Sangma C. BMC Genomics 10 Suppl 3 S24 (2009)
  222. Computationally Designed Cyclic Peptides Derived from an Antibody Loop Increase Breadth of Binding for Influenza Variants. Sevy AM, Gilchuk IM, Brown BP, Bozhanova NG, Nargi R, Jensen M, Meiler J, Crowe JE. Structure 28 1114-1123.e4 (2020)
  223. Extensive mammalian ancestry of pandemic (H1N1) 2009 virus. Ilyushina NA, Kim JK, Negovetich NJ, Choi YK, Lang V, Bovin NV, Forrest HL, Song MS, Pascua PN, Kim CJ, Webster RG, Webby RJ. Emerg Infect Dis 16 314-317 (2010)
  224. Insights into the human glycan receptor conformation of 1918 pandemic hemagglutinin-glycan complexes derived from nuclear magnetic resonance and molecular dynamics studies. Elli S, Macchi E, Rudd TR, Raman R, Sassaki G, Viswanathan K, Yates EA, Shriver Z, Naggi A, Torri G, Sasisekharan R, Guerrini M. Biochemistry 53 4122-4135 (2014)
  225. Letter Pandemic avian influenza. Mermel LA. Lancet Infect Dis 5 666-667 (2005)
  226. Platform technology to generate broadly cross-reactive antibodies to α-helical epitopes in hemagglutinin proteins from influenza A viruses. Jiang Z, Gera L, Mant CT, Hirsch B, Yan Z, Shortt JA, Shortt JA, Pollock DD, Qian Z, Holmes KV, Hodges RS. Biopolymers 106 144-159 (2016)
  227. Self-assembled artificial viral capsids bearing coiled-coils at the surface. Fujita S, Matsuura K. Org Biomol Chem 15 5070-5077 (2017)
  228. Structural and functional analysis of surface proteins from an A(H3N8) influenza virus isolated from New England harbor seals. Yang H, Nguyen HT, Carney PJ, Guo Z, Chang JC, Jones J, Davis CT, Villanueva JM, Gubareva LV, Stevens J. J Virol 89 2801-2812 (2015)
  229. Synthesis and Antiviral Activity of Camphene Derivatives against Different Types of Viruses. Sokolova AS, Putilova VP, Yarovaya OI, Zybkina AV, Mordvinova ED, Zaykovskaya AV, Shcherbakov DN, Orshanskaya IR, Sinegubova EO, Esaulkova IL, Borisevich SS, Bormotov NI, Shishkina LN, Zarubaev VV, Pyankov OV, Maksyutov RA, Salakhutdinov NF. Molecules 26 2235 (2021)
  230. Amino acid sequence analysis and identification of mutations under positive selection in hemagglutinin of 2009 influenza A (H1N1) isolates. Ding X, Jiang L, Ke C, Yang Z, Lei C, Cao K, Xu J, Xu L, Yang X, Zhang Y, Huang P, Huang W, Zhu X, He Z, Liu L, Li J, Yuan J, Wu J, Tang X, Li M. Virus Genes 41 329-340 (2010)
  231. Analysis of antigenically important residues in human influenza A virus in terms of B-cell epitopes. Lees WD, Moss DS, Shepherd AJ. J Virol 85 8548-8555 (2011)
  232. Antigenicity and transmissibility of a novel clade 2.3.2.1 avian influenza H5N1 virus. Xu L, Bao L, Yuan J, Li F, Lv Q, Deng W, Xu Y, Yao Y, Yu P, Chen H, Yuen KY, Qin C. J Gen Virol 94 2616-2626 (2013)
  233. Biogenesis of influenza a virus hemagglutinin cross-protective stem epitopes. Magadán JG, Altman MO, Ince WL, Hickman HD, Stevens J, Chevalier A, Baker D, Wilson PC, Ahmed R, Bennink JR, Yewdell JW. PLoS Pathog 10 e1004204 (2014)
  234. Broad-spectrum antivirals of protoporphyrins inhibit the entry of highly pathogenic emerging viruses. Lu S, Pan X, Chen D, Xie X, Wu Y, Shang W, Jiang X, Sun Y, Fan S, He J. Bioorg Chem 107 104619 (2021)
  235. Changes to the dynamic nature of hemagglutinin and the emergence of the 2009 pandemic H1N1 influenza virus. Yoon SW, Chen N, Ducatez MF, McBride R, Barman S, Fabrizio TP, Webster RG, Haliloglu T, Paulson JC, Russell CJ, Hertz T, Ben-Tal N, Webby RJ. Sci Rep 5 12828 (2015)
  236. Fold recognition of the human immunodeficiency virus type 1 V3 loop and flexibility of its crown structure during the course of adaptation to a host. Watabe T, Kishino H, Okuhara Y, Kitazoe Y. Genetics 172 1385-1396 (2006)
  237. Molecular modeling, docking and dynamics simulations of GNA-related lectins for potential prevention of influenza virus (H1N1). Xu HL, Li CY, He XM, Niu KQ, Peng H, Li WW, Zhou CC, Bao JK. J Mol Model 18 27-37 (2012)
  238. Organization of influenza A virus envelope at neutral and low pH. Giocondi MC, Ronzon F, Nicolai MC, Dosset P, Milhiet PE, Chevalier M, Le Grimellec C. J Gen Virol 91 329-338 (2010)
  239. Soloxolone methyl inhibits influenza virus replication and reduces virus-induced lung inflammation. Markov AV, Sen'kova AV, Warszycki D, Salomatina OV, Salakhutdinov NF, Zenkova MA, Logashenko EB. Sci Rep 7 13968 (2017)
  240. A conserved histidine in Group-1 influenza subtype hemagglutinin proteins is essential for membrane fusion activity. Trost JF, Wang W, Liang B, Galloway SE, Agbogu E, Byrd-Leotis L, Steinhauer DA. Virology 536 78-90 (2019)
  241. Cluster-Transition Determining Sites Underlying the Antigenic Evolution of Seasonal Influenza Viruses. Quan L, Ji C, Ding X, Peng Y, Liu M, Sun J, Jiang T, Wu A. Mol Biol Evol 36 1172-1186 (2019)
  242. Genetic correlation between current circulating H1N1 swine and human influenza viruses. Lu L, Yin Y, Sun Z, Gao L, Gao GF, Liu S, Sun L, Liu W. J Clin Virol 49 186-191 (2010)
  243. H1N1: can a pandemic cycle be broken? Settembre EC, Dormitzer PR, Rappuoli R. Sci Transl Med 2 24ps14 (2010)
  244. RCSB Protein Data Bank resources for structure-facilitated design of mRNA vaccines for existing and emerging viral pathogens. Goodsell DS, Burley SK. Structure 30 55-68.e2 (2022)
  245. Rapid estimation of binding activity of influenza virus hemagglutinin to human and avian receptors. Cao Y, Koh X, Dong L, Du X, Wu A, Ding X, Deng H, Shu Y, Chen J, Jiang T. PLoS One 6 e18664 (2011)
  246. Synthesis of multivalent sialyllactosamine-carrying glyco-nanoparticles with high affinity to the human influenza virus hemagglutinin. Ogata M, Umemura S, Sugiyama N, Kuwano N, Koizumi A, Sawada T, Yanase M, Takaha T, Kadokawa JI, Usui T. Carbohydr Polym 153 96-104 (2016)
  247. The inducible amphisome isolates viral hemagglutinin and defends against influenza A virus infection. Omi J, Watanabe-Takahashi M, Igai K, Shimizu E, Tseng CY, Miyasaka T, Waku T, Hama S, Nakanishi R, Goto Y, Nishino Y, Miyazawa A, Natori Y, Yamashita M, Nishikawa K. Nat Commun 11 162 (2020)
  248. Amino acid changes in PB2 and HA affect the growth of a recombinant influenza virus expressing a fluorescent reporter protein. Katsura H, Fukuyama S, Watanabe S, Ozawa M, Neumann G, Kawaoka Y. Sci Rep 6 19933 (2016)
  249. Computational studies of pandemic 1918 and 2009 H1N1 hemagglutinins bound to avian and human receptor analogs. Kannan S, Kolandaivel P. J Biomol Struct Dyn 34 272-289 (2016)
  250. Functional and antigenic analyses of the 1918 influenza virus haemagglutinin using a recombinant vaccinia virus expression system. Elliot AJ, Steinhauer DA, Daniels RS, Oxford JS. Virus Res 122 11-19 (2006)
  251. Letter Genome Hotspots for Nucleotide Substitutions and the Evolution of Influenza A (H1N1) Human Strains. Civetta A, Ostapchuk DC, Nwali B. Genome Biol Evol 8 986-993 (2016)
  252. Molecular Characterisation of the Haemagglutinin Glycan-Binding Specificity of Egg-Adapted Vaccine Strains of the Pandemic 2009 H1N1 Swine Influenza A Virus. Carbone V, Schneider EK, Rockman S, Baker M, Huang JX, Ong C, Cooper MA, Yuriev E, Li J, Velkov T. Molecules 20 10415-10434 (2015)
  253. Quaternary ammonium salts based on (-)-borneol as effective inhibitors of influenza virus. Sokolova AS, Yarovaya OI, Baranova DV, Galochkina AV, Shtro AA, Kireeva MV, Borisevich SS, Gatilov YV, Zarubaev VV, Salakhutdinov NF. Arch Virol 166 1965-1976 (2021)
  254. The mechanism of poly-galloyl-glucoses preventing Influenza A virus entry into host cells. Ge H, Liu G, Xiang YF, Wang Y, Guo CW, Chen NH, Zhang YJ, Wang YF, Kitazato K, Xu J. PLoS One 9 e94392 (2014)
  255. A New Strategy to Reduce Influenza Escape: Detecting Therapeutic Targets Constituted of Invariance Groups. Lao J, Vanet A. Viruses 9 E38 (2017)
  256. Acetylation, Methylation and Allysine Modification Profile of Viral and Host Proteins during Influenza A Virus Infection. Ahmed F, Kleffmann T, Husain M. Viruses 13 1415 (2021)
  257. Asprellcosides B of Ilex asprella Inhibits Influenza A Virus Infection by Blocking the Hemagglutinin- Mediated Membrane Fusion. Zhang W, Chen ST, He QY, Huang LQ, Li X, Lai XP, Zhan SF, Huang HT, Liu XH, Wu J, Li G. Front Microbiol 9 3325 (2018)
  258. Bat lung epithelial cells show greater host species-specific innate resistance than MDCK cells to human and avian influenza viruses. Slater T, Eckerle I, Chang KC. Virol J 15 68 (2018)
  259. Educational Material about Influenza Viruses. Lakdawala SS, Nair N, Hutchinson E. Viruses 11 E231 (2019)
  260. Epidemiology and full genome sequence analysis of H1N1pdm09 from Northeast China. Li X, Kong M, Chen J, Su X, Zou M, Guo L, Li L, Ding J. Virus Genes 47 199-209 (2013)
  261. Evaluating the role of wild songbirds or rodents in spreading avian influenza virus across an agricultural landscape. Houston DD, Azeem S, Lundy CW, Sato Y, Guo B, Blanchong JA, Gauger PC, Marks DR, Yoon KJ, Adelman JS. PeerJ 5 e4060 (2017)
  262. Fluorescence polarization-based assay using N-glycan-conjugated quantum dots for screening in hemagglutinin blockers for influenza A viruses. Okamatsu M, Feng F, Ohyanagi T, Nagahori N, Someya K, Sakoda Y, Miura N, Nishimura S, Kida H. J Virol Methods 187 390-394 (2013)
  263. Genetic characterization of an adapted pandemic 2009 H1N1 influenza virus that reveals improved replication rates in human lung epithelial cells. Wörmann X, Lesch M, Welke RW, Okonechnikov K, Abdurishid M, Sieben C, Geissner A, Brinkmann V, Kastner M, Karner A, Zhu R, Hinterdorfer P, Anish C, Seeberger PH, Herrmann A, Meyer TF, Karlas A. Virology 492 118-129 (2016)
  264. Human Monoclonal Antibody Derived from Transchromosomic Cattle Neutralizes Multiple H1 Clades of Influenza A Virus by Recognizing a Novel Conformational Epitope in the Hemagglutinin Head Domain. Gao R, Sreenivasan CC, Sheng Z, Hause BM, Zhou B, Wentworth DE, Clement T, Rausch D, Brunick C, Christopher-Hennings J, Wu H, Bausch CL, Sullivan EJ, Hoppe AD, Huber VC, Wang D, Li F. J Virol 94 e00945-20 (2020)
  265. Identification and Characterization of Swine Influenza Virus H1N1 Variants Generated in Vaccinated and Nonvaccinated, Challenged Pigs. López-Valiñas Á, Sisteré-Oró M, López-Serrano S, Baioni L, Darji A, Chiapponi C, Segalés J, Ganges L, Núñez JI. Viruses 13 2087 (2021)
  266. Molecular characterization of severe and mild cases of influenza A (H1N1) 2009 strain from Argentina. Baumeister E, Palacios G, Cisterna D, Solovyov A, Hui J, Savji N, Bussetti AV, Campos A, Pontoriero A, Jabado OJ, Street C, Hirschberg DL, Rabadan R, Alonio V, Molina V, Hutchison S, Egholm M, Lipkin WI. Medicina (B Aires) 70 518-523 (2010)
  267. New reassortant and enzootic European swine influenza viruses transmit efficiently through direct contact in the ferret model. Fobian K, Fabrizio TP, Yoon SW, Hansen MS, Webby RJ, Larsen LE. J Gen Virol 96 1603-1612 (2015)
  268. Nuclear Magnetic Resonance and Molecular Dynamics Simulation of the Interaction between Recognition Protein H7 of the Novel Influenza Virus H7N9 and Glycan Cell Surface Receptors. Macchi E, Rudd TR, Raman R, Sasisekharan R, Yates EA, Naggi A, Guerrini M, Elli S. Biochemistry 55 6605-6616 (2016)
  269. Receptor recognition mechanism of human influenza A H1N1 (1918), avian influenza A H5N1 (2004), and pandemic H1N1 (2009) neuraminidase. Jongkon N, Sangma C. J Mol Model 18 285-293 (2012)
  270. S-Linked sialyloligosaccharides bearing liposomes and micelles as influenza virus inhibitors. Yeh HW, Lin TS, Wang HW, Cheng HW, Liu DZ, Liang PH. Org Biomol Chem 13 11518-11528 (2015)
  271. The inexact science of influenza prediction. Zambon M. Lancet 363 582-583 (2004)
  272. A negative stain for electron microscopic tomography. Fera A, Farrington JE, Zimmerberg J, Reese TS. Microsc Microanal 18 331-335 (2012)
  273. Characterization of an H3N2 triple reassortant influenza virus with a mutation at the receptor binding domain (D190A) that occurred upon virus transmission from turkeys to pigs. Yassine HM, Khatri M, Lee CW, Saif YM. Virol J 7 258 (2010)
  274. News Extinct 1918 virus comes alive. Lamb RA, Jackson D. Nat Med 11 1154-1156 (2005)
  275. Genetic characterization of H1 avian influenza viruses isolated from migratory birds and domestic ducks in Korea. Jeong OM, Kim YJ, Choi JG, Kang HM, Kim MC, Kwon JH, Lee YJ. Virus Genes 42 55-63 (2011)
  276. Human antibody pieces together the puzzle of the trimeric Lassa virus surface antigen. Zeltina A, Bowden TA. Nat Struct Mol Biol 24 559-560 (2017)
  277. Phylogenetic analyses of pandemic influenza A (H1N1) virus in university students at Tobetsu, Hokkaido, Japan. Inoue E, Ieko M, Takahashi N, Osawa Y, Okazaki K. Microbiol Immunol 56 273-279 (2012)
  278. Quantitative structural analysis of influenza virus by cryo-electron tomography and convolutional neural networks. Huang QJ, Song K, Xu C, Bolon DNA, Wang JP, Finberg RW, Schiffer CA, Somasundaran M. Structure 30 777-786.e3 (2022)
  279. Serological and virological surveillance of swine H1N1 and H3N2 influenza virus infection in two farms located in Hubei province, central China. Wu R, Liu Z, Liang W, Yang K, Deng J, Duan Z, Zhou D, Xu D. Zoonoses Public Health 58 508-513 (2011)
  280. Affinity of HIV-1 antibody 2G12 with monosaccharides: a theoretical study based on explicit and implicit water models. Koyama Y, Ueno-Noto K, Takano K. Comput Biol Chem 49 36-44 (2014)
  281. Antiviral compound screening, peptide designing, and protein network construction of influenza a virus (strain a/Puerto Rico/8/1934 H1N1). Saikia S, Bordoloi M, Sarmah R, Kolita B. Drug Dev Res 80 106-124 (2019)
  282. Discovery of New Ginsenol-Like Compounds with High Antiviral Activity. Volobueva AS, Yarovaya OI, Kireeva MV, Borisevich SS, Kovaleva KS, Mainagashev IY, Gatilov YV, Ilyina MG, Zarubaev VV, Salakhutdinov NF. Molecules 26 6794 (2021)
  283. Ganglioside GM3 Analogues Containing Monofluoromethylene-Linked Sialoside: Synthesis, Stereochemical Effects, Conformational Behavior, and Biological Activities. Hirai G, Kato M, Koshino H, Nishizawa E, Oonuma K, Ota E, Watanabe T, Hashizume D, Tamura Y, Okada M, Miyagi T, Sodeoka M. JACS Au 1 137-146 (2021)
  284. Homology modeling study toward identifying structural properties in the HA2 B-loop that would influence the HA1 receptor-binding site. Cueno ME, Imai K, Shimizu K, Ochiai K. J Mol Graph Model 44 161-167 (2013)
  285. Hydrogen bond driven self-assembled C2-symmetric chlorin syn dimers; unorthodox models for chlorophyll 'special pairs' in photosynthetic reaction centres. Nikkonen T, Haavikko R, Helaja J. Org Biomol Chem 7 2046-2052 (2009)
  286. Identification of Hemagglutinin Mutations Caused by Neuraminidase Antibody Pressure. Wang F, Wan Z, Wang Y, Wu J, Fu H, Gao W, Shao H, Qian K, Ye J, Qin A. Microbiol Spectr 9 e0143921 (2021)
  287. Managing dual use technology: it takes two to tango. Kant L, Mourya DT. Sci Eng Ethics 16 77-83 (2010)
  288. Molecular dynamics simulation of the effects of single (S221P) and double (S221P and K216E) mutations in the hemagglutinin protein of influenza A H5N1 virus: a study on host receptor specificity. Behera AK, Chandra I, Cherian SS. J Biomol Struct Dyn 34 2054-2067 (2016)
  289. Parainfluenza virus entry at the onset of infection. Marcink TC, Porotto M, Moscona A. Adv Virus Res 111 1-29 (2021)
  290. Structural differences between the avian and human H7N9 hemagglutinin proteins are attributable to modifications in salt bridge formation: a computational study with implications in viral evolution. Cueno ME, Imai K, Tamura M, Ochiai K. PLoS One 8 e76764 (2013)
  291. The Highly Productive Thermothelomyces heterothallica C1 Expression System as a Host for Rapid Development of Influenza Vaccines. Keresztes G, Baer M, Alfenito MR, Verwoerd TC, Kovalchuk A, Wiebe MG, Andersen TK, Saloheimo M, Tchelet R, Kensinger R, Grødeland G, Emalfarb M. Vaccines (Basel) 10 148 (2022)
  292. Tropism of Pandemic 2009 H1N1 Influenza a Virus. Ramadhany R, Yasugi M, Nakamura S, Daidoji T, Watanabe Y, Takahashi K, Ikuta K, Nakaya T. Front Microbiol 3 128 (2012)
  293. Editorial [Animals as vectors of emerging diseases]. Ortiz de Lejarazu Leonardo R. Med Clin (Barc) 124 16-18 (2005)
  294. Editorial [Avian flu: possible implications for human health]. Lortholary O, Lecuit M, Rouzioux C, Berche P. Med Sci (Paris) 21 1011-1014 (2005)
  295. Characterizing Receptor Flexibility to Predict Mutations That Lead to Human Adaptation of Influenza Hemagglutinin. Xu H, Palpant T, Weinberger C, Shaw DE. J Chem Theory Comput 18 4995-5005 (2022)
  296. Coming soon to an ICU near you: severe pandemic influenza in ICU patients in Spain. Opal SM. Crit Care 13 196 (2009)
  297. Conserved Sequence Analysis of Influenza A Virus HA Segment and Its Application in Rapid Typing. Lin Q, Ji X, Wu F, Ma L. Diagnostics (Basel) 11 1328 (2021)
  298. Functional chimeras of human immunodeficiency virus type 1 Gp120 and influenza A virus (H3) hemagglutinin. Copeland KM, Elliot AJ, Daniels RS. J Virol 79 6459-6471 (2005)
  299. Immunological characterization of monoclonal antibodies used in rapid influenza diagnostic test for detection of the 2009 pandemic influenza A(H1N1)pdm09 infection. Yi H, Lee MS, Lee JY, Lee HK, Kang C. J Microbiol 53 166-175 (2015)
  300. Implications of localized charge for human influenza A H1N1 hemagglutinin evolution: Insights from deep mutational scans. Saad-Roy CM, Arinaminpathy N, Wingreen NS, Levin SA, Akey JM, Grenfell BT. PLoS Comput Biol 16 e1007892 (2020)
  301. Improving the identification of antigenic sites in the H1N1 influenza virus through accounting for the experimental structure in a sparse hierarchical Bayesian model. Davies V, Harvey WT, Reeve R, Husmeier D. J R Stat Soc Ser C Appl Stat 68 859-885 (2019)
  302. Influenza Hemagglutinin Head Domain Mimicry by Rational Design. Mallajosyula VVA, Swaroop S, Varadarajan R. Protein J 39 434-448 (2020)
  303. Investigating host-virus interaction mechanism and phylogenetic analysis of viral proteins involved in the pathogenesis. Naqvi AAT, Anjum F, Shafie A, Badar S, Elasbali AM, Yadav DK, Hassan MI. PLoS One 16 e0261497 (2021)
  304. Triplet entropy analysis of hemagglutinin and neuraminidase sequences measures influenza virus phylodynamics. Gerhardt GJ, Takeda AA, Andrighetti T, Sartor IT, Echeverrigaray SL, de Avila E Silva S, Dos Santos L, Rybarczyk-Filho JL. Gene 528 277-281 (2013)
  305. In Vivo Therapy with M2e-Specific IgG Selects for an Influenza A Virus Mutant with Delayed Matrix Protein 2 Expression. Van den Hoecke S, Ballegeer M, Vrancken B, Deng L, Job ER, Roose K, Schepens B, Van Hoecke L, Lemey P, Saelens X. mBio 12 e0074521 (2021)
  306. A singular mutation in the hemagglutinin of the 1918 pandemic virus. Sanejouand YH. Arch Biochem Biophys 625-626 13-16 (2017)
  307. Ab initio base fragment molecular orbital studies of influenza viral hemagglutinin HA1 full-domains in complex with sialoside receptors. Sawada T, Hashimoto T, Tokiwa H, Suzuki T, Nakano H, Ishida H, Kiso M, Suzuki Y. J Mol Genet Med 3 133-142 (2008)
  308. Genetic characterization of a new candidate hemagglutinin subtype of influenza A viruses. Fereidouni S, Starick E, Karamendin K, Genova CD, Scott SD, Khan Y, Harder T, Kydyrmanov A. Emerg Microbes Infect 12 2225645 (2023)
  309. Host-Adaptive Signatures of H3N2 Influenza Virus in Canine. Li X, Liu J, Qiu Z, Liao Q, Peng Y, Chen Y, Shu Y. Front Vet Sci 8 740472 (2021)
  310. Inactivation mechanisms of influenza A virus under pH conditions encountered in aerosol particles as revealed by whole-virus HDX-MS. David SC, Vadas O, Glas I, Schaub A, Luo B, D'angelo G, Montoya JP, Bluvshtein N, Hugentobler W, Klein LK, Motos G, Pohl M, Violaki K, Nenes A, Krieger UK, Stertz S, Peter T, Kohn T. mSphere 8 e0022623 (2023)
  311. Influenza antigenic drift: what is the driving force? Wang Q. Cellscience 6 1-8 (2010)
  312. Microbiological diagnosis of community-acquired respiratory tract infections by nucleic acid detection. Jaton-Ogay K, Bille J. Expert Opin Med Diagn 2 947-961 (2008)
  313. Molecular design of antimicrobial peptides based on hemagglutinin fusion domain to combat antibiotic resistance in bacterial infection. Ye H. J Pept Sci 24 (2018)
  314. N-Glycomics of Human Erythrocytes. Bua RO, Messina A, Sturiale L, Barone R, Garozzo D, Palmigiano A. Int J Mol Sci 22 8063 (2021)
  315. Novel 1,2,4-Triazole- and Tetrazole-Containing 4H-Thiopyrano[2,3-b]quinolines: Synthesis Based on the Thio-Michael/aza-Morita-Baylis-Hillman Tandem Reaction and Investigation of Antiviral Activity. Khramchikhin AV, Skryl'nikova MA, Gureev MA, Zarubaev VV, Esaulkova IL, Ilyina PA, Mammeri OA, Spiridonova DV, Porozov YB, Ostrovskii VA. Molecules 28 7427 (2023)
  316. Recent strategies to identify broadly neutralizing antibodies against influenza A virus. Tscherne DM, García-Sastre A. F1000 Biol Rep 1 12 (2009)
  317. Reverse-zoonoses of 2009 H1N1 pandemic influenza A viruses and evolution in United States swine results in viruses with zoonotic potential. Markin A, Ciacci Zanella G, Arendsee ZW, Zhang J, Krueger KM, Gauger PC, Vincent Baker AL, Anderson TK. PLoS Pathog 19 e1011476 (2023)
  318. Structural dynamics reveal subtype-specific activation and inhibition of influenza virus hemagglutinin. Garcia NK, Kephart SM, Benhaim MA, Matsui T, Mileant A, Guttman M, Lee KK. J Biol Chem 299 104765 (2023)
  319. Editorial Structurally speaking. Nat Rev Microbiol 2 351 (2004)
  320. Univ-flu: A structure-based model of influenza A virus hemagglutinin for universal antigenic prediction. Qiu J, Tian X, Liu Y, Lu T, Wang H, Shi Z, Lu S, Xu D, Qiu T. Comput Struct Biotechnol J 20 4656-4666 (2022)
  321. News Viral crossings. Goodman L. J Clin Invest 113 786 (2004)