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Carbohydrate recognition and neck domains of surfactant protein A (SP-A)

Source organism: Rattus norvegicus
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF00059
Domain description: Lectin C-type domain
Occurring in:
  1. Pulmonary surfactant-associated protein A
The deposited structure of PDB entry 1r13 contains 1 copy of Pfam domain PF00059 (Lectin C-type domain) in Pulmonary surfactant-associated protein A. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR001304
Domain description: C-type lectin-like
Occurring in:
  1. Pulmonary surfactant-associated protein A
IPR018378
Domain description: C-type lectin, conserved site
Occurring in:
  1. Pulmonary surfactant-associated protein A
IPR033990
Domain description: Collectin, C-type lectin-like domain
Occurring in:
  1. Pulmonary surfactant-associated protein A
IPR016187
Domain description: C-type lectin fold
Occurring in:
  1. Pulmonary surfactant-associated protein A
IPR016186
Domain description: C-type lectin-like/link domain superfamily
Occurring in:
  1. Pulmonary surfactant-associated protein A

Structure domain

CATH CATH domain
3.10.100.10
Class: Alpha Beta
Architecture: Roll
Topology: Mannose-Binding Protein A; Chain A
Homology: Mannose-Binding Protein A, subunit A
Occurring in:
  1. Pulmonary surfactant-associated protein A
The deposited structure of PDB entry 1r13 contains 1 copy of CATH domain 3.10.100.10 (Mannose-Binding Protein A; Chain A) in Pulmonary surfactant-associated protein A. Showing 1 copy in chain A.
SCOP SCOP annotations
56437
Class: Alpha and beta proteins (a+b)
Fold: C-type lectin-like
Superfamily: C-type lectin-like
Occurring in:
  1. Pulmonary surfactant-associated protein A
The deposited structure of PDB entry 1r13 contains 1 copy of SCOP domain 56437 (C-type lectin domain) in Pulmonary surfactant-associated protein A. Showing 1 copy in chain A.
57945
Class: Coiled coil proteins
Fold: Parallel coiled-coil
Superfamily: Triple coiled coil domain of C-type lectins
Occurring in:
  1. Pulmonary surfactant-associated protein A
The deposited structure of PDB entry 1r13 contains 1 copy of SCOP domain 57945 (Triple coiled coil domain of C-type lectins) in Pulmonary surfactant-associated protein A. Showing 1 copy in chain A.

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