› 1mvm

X-ray diffraction
3.5Å resolution

MVM(STRAIN I), COMPLEX(VIRAL COAT/DNA), VP2, PH=7.5, T=4 DEGREES C

Released:
DOI: 10.2210/pdb1mvm/pdb
PDB 1mvm coloured by chain and viewed from the front.
PDB 1mvm coloured by chain and viewed from the side.
PDB 1mvm coloured by chain and viewed from the top.
Source organism: Minute virus of mice
Primary publication:
Structure determination of minute virus of mice.
Llamas-Saiz AL, Agbandje-McKenna M, Wikoff WR, Bratton J, Tattersall P, Rossmann MG
Acta Crystallogr. D Biol. Crystallogr. 53 93-102 (1997)
PMID: 15299974

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assemblies composition:
hetero 240-mer (preferred)
hetero tetramer
hetero icosamer
hetero 24-mer
hetero 120-mer
Entry contents:
1 distinct polypeptide molecule
3 distinct DNA molecules
Macromolecules (4 distinct):
Capsid protein VP1 Chain: A
Molecule details ›
Chain: A
Length: 587 amino acids
Theoretical weight: 64.75 KDa
Source organism: Minute virus of mice
UniProt:
  • Canonical: P07302 (Residues: 143-729; Coverage: 81%)
Sequence domains: Parvovirus coat protein VP2
Structure domains: Parvovirus coat protein VP1/VP2
DNA (5'-D(*CP*CP*AP*CP*CP*CP*CP*AP*AP*CP*A)-3') Chain: B
Molecule details ›
Chain: B
Length: 11 nucleotides
Theoretical weight: 3.23 KDa
Source organism: Minute virus of mice
Expression system: Not provided
DNA (5'-D(*CP*AP*AP*A)-3') Chain: C
Molecule details ›
Chain: C
Length: 4 nucleotides
Theoretical weight: 1.18 KDa
Source organism: Minute virus of mice
Expression system: Not provided
DNA (5'-D(P*A)-3') Chain: D
Molecule details ›
Chain: D
Length: 1 nucleotides
Theoretical weight: 331 Da
Source organism: Minute virus of mice
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CHESS BEAMLINE F1
Spacegroup: C2
Unit cell:
a: 448.7Å b: 416.7Å c: 305.3Å
α: 90° β: 95.8° γ: 90°
Expression system: Not provided

Quick links

Citations

6 review citations

The VP1u of Human Parvovirus B19: A Multifunctional Capsid Protein with Biotechnological Applications.
Ros et al. (2020)
5 more

11 mentions without citation

DNA-mediated anisotropic mechanical reinforcement of a virus.
Carrasco et al. (2006)
10 more