X-ray diffraction
2.85Å resolution

Structure of a C-terminally truncated form of glycoprotein D from HSV-1


Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assemblies composition:
homo dimer (preferred)
homo octamer
Entry contents:
1 distinct polypeptide molecule
Envelope glycoprotein D Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 287 amino acids
Theoretical weight: 31.84 KDa
Source organism: Human alphaherpesvirus 1
Expression system: Spodoptera frugiperda
  • Canonical: P57083 (Residues: 26-310; Coverage: 77%)
Gene names: US6, gD
Sequence domains: Herpesvirus glycoprotein D/GG/GX domain
Structure domains: Glycoprotein D; Chain: A;

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X25
Spacegroup: P4
Unit cell:
a: 131.416Å b: 131.416Å c: 83.265Å
α: 90° β: 90° γ: 90°
R R work R free
0.288 0.278 0.297
Expression system: Spodoptera frugiperda