1k9i

X-ray diffraction
2.5Å resolution

Complex of DC-SIGN and GlcNAc2Man3

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo decamer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
CD209 antigen Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 156 amino acids
Theoretical weight: 17.82 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9NNX6 (Residues: 249-404; Coverage: 39%)
Gene names: CD209, CLEC4L
Structure domains: Mannose-Binding Protein A, subunit A

Ligands and Environments

Carbohydrate polymer : NEW Components: MAN, NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: C2
Unit cell:
a: 106.805Å b: 148.161Å c: 112.991Å
α: 90° β: 91.03° γ: 90°
R-values:
R R work R free
0.213 0.213 0.258
Expression system: Escherichia coli