› 1jzc

Solution NMR

THE SOLUTION STRUCTURE OF THE MUTANT 5'AUG3' TRILOOP IN THE RNA PROMOTER REGION OF THE BROME MOSAIC VIRUS GENOMIC (+)-RNA

Released:
DOI: 10.2210/pdb1jzc/pdb
PDB entry 1jzc coloured by chain, front view.
PDB entry 1jzc coloured by chain, side view.
PDB entry 1jzc coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
A mutant viral RNA promoter with an altered conformation retains efficient recognition by a viral RNA replicase through a solution-exposed adenine.
Kim CH, Kao CC
RNA 7 1476-85 (2001)
PMID: 11680852

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196072 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*UP*GP*CP*AP*UP*GP*GP*CP*AP*CP*C)-3' Chain: A
Molecule details ›
Chain: A
Length: 13 nucleotides
Theoretical weight: 4.17 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing restrained molecular dynamics
Expression system: Not provided

Quick links

Citations

3 review citations

Non-encapsidation activities of the capsid proteins of positive-strand RNA viruses.
Ni et al. (2013)
2 more

1 mention without citation

Comparative Study of Single-stranded Oligonucleotides Secondary Structure Prediction Tools.
Binet et al. (2023)