Function and Biology

HIN RECOMBINASE BOUND TO DNA: THE ORIGIN OF SPECIFICITY IN MAJOR AND MINOR GROOVE INTERACTIONS

Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Biochemical function: DNA binding
Biological process: DNA recombination
Cellular component: not assigned

GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF02796
Domain description: Helix-turn-helix domain of resolvase
Occurring in:
  1. DNA-invertase hin
The deposited structure of PDB entry 1hcr contains 1 copy of Pfam domain PF02796 (Helix-turn-helix domain of resolvase) in DNA-invertase hin. Showing 1 copy in chain C [auth A].

InterPro InterPro annotations
IPR009057
Domain description: Homeobox-like domain superfamily
Occurring in:
  1. DNA-invertase hin
IPR006120
Domain description: Resolvase, HTH domain
Occurring in:
  1. DNA-invertase hin

Structure domain

CATH CATH domain
1.10.10.60
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Arc Repressor Mutant, subunit A
Homology: Homeodomain-like
Occurring in:
  1. DNA-invertase hin
The deposited structure of PDB entry 1hcr contains 1 copy of CATH domain 1.10.10.60 (Arc Repressor Mutant, subunit A) in DNA-invertase hin. Showing 1 copy in chain C [auth A].
SCOP SCOP annotation
46728
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Occurring in:
  1. DNA-invertase hin
The deposited structure of PDB entry 1hcr contains 1 copy of SCOP domain 46728 (Recombinase DNA-binding domain) in DNA-invertase hin. Showing 1 copy in chain C [auth A].