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Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment

Source organism: Homo sapiens
Biochemical function: ATPase binding
Biological process: ribosomal small subunit biogenesis
Cellular component: ribonucleoprotein complex

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GO terms

Sequence family

Pfam Protein family (Pfam)
PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. NHP2-like protein 1
The deposited structure of PDB entry 1e7k contains 2 copies of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in NHP2-like protein 1. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR018492
Domain description: Ribosomal protein eL8/Nhp2 family
Occurring in:
  1. NHP2-like protein 1
IPR002415
Domain description: H/ACA ribonucleoprotein complex, subunit Nhp2-like
Occurring in:
  1. NHP2-like protein 1
IPR029064
Domain description: Ribosomal protein eL30-like superfamily
Occurring in:
  1. NHP2-like protein 1
IPR004037
Domain description: Large ribosomal subunit protein eL8-like, conserved site
Occurring in:
  1. NHP2-like protein 1
IPR004038
Domain description: Ribosomal protein eL8/eL30/eS12/Gadd45
Occurring in:
  1. NHP2-like protein 1

Structure domain

CATH CATH domain
3.30.1330.30
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: 60s Ribosomal Protein L30; Chain: A;
Homology: 60s Ribosomal Protein L30; Chain: A;
Occurring in:
  1. NHP2-like protein 1
The deposited structure of PDB entry 1e7k contains 2 copies of CATH domain 3.30.1330.30 (60s Ribosomal Protein L30; Chain: A;) in NHP2-like protein 1. Showing 1 copy in chain A.
SCOP SCOP annotation
55316
Class: Alpha and beta proteins (a+b)
Fold: Bacillus chorismate mutase-like
Superfamily: L30e-like
Occurring in:
  1. NHP2-like protein 1
The deposited structure of PDB entry 1e7k contains 2 copies of SCOP domain 55316 (L30e/L7ae ribosomal proteins) in NHP2-like protein 1. Showing 1 copy in chain A.

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