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THE CRYSTAL STRUCTURE OF MODIFIED BOVINE FIBRINOGEN (AT ~4 ANGSTROM RESOLUTION)

Source organism: Bos taurus
Biochemical function: signaling receptor binding
Biological process: protein polymerization
Cellular component: fibrinogen complex

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF08702
Domain description: Fibrinogen alpha/beta chain family
Occurring in:
  1. Fibrinogen alpha chain
  2. Fibrinogen beta chain
  3. Fibrinogen gamma-B chain
The deposited structure of PDB entry 1deq contains 4 copies of Pfam domain PF08702 (Fibrinogen alpha/beta chain family) in Fibrinogen alpha chain. Showing 1 copy in chain A.
The deposited structure of PDB entry 1deq contains 4 copies of Pfam domain PF08702 (Fibrinogen alpha/beta chain family) in Fibrinogen beta chain. Showing 1 copy in chain L [auth R].
The deposited structure of PDB entry 1deq contains 4 copies of Pfam domain PF08702 (Fibrinogen alpha/beta chain family) in Fibrinogen gamma-B chain. Showing 1 copy in chain M [auth S].

PF00147
Domain description: Fibrinogen beta and gamma chains, C-terminal globular domain
Occurring in:
  1. Fibrinogen beta chain
  2. Fibrinogen gamma-B chain
The deposited structure of PDB entry 1deq contains 4 copies of Pfam domain PF00147 (Fibrinogen beta and gamma chains, C-terminal globular domain) in Fibrinogen beta chain. Showing 1 copy in chain B.
The deposited structure of PDB entry 1deq contains 4 copies of Pfam domain PF00147 (Fibrinogen beta and gamma chains, C-terminal globular domain) in Fibrinogen gamma-B chain. Showing 1 copy in chain C.

InterPro InterPro annotations
IPR002181
Domain description: Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Occurring in:
  1. Fibrinogen beta chain
  2. Fibrinogen gamma-B chain
IPR012290
Domain description: Fibrinogen, alpha/beta/gamma chain, coiled coil domain
Occurring in:
  1. Fibrinogen alpha chain
  2. Fibrinogen beta chain
  3. Fibrinogen gamma-B chain
IPR037579
Domain description: Fibrinogen
Occurring in:
  1. Fibrinogen alpha chain
  2. Fibrinogen beta chain
  3. Fibrinogen gamma-B chain
IPR020837
Domain description: Fibrinogen, conserved site
Occurring in:
  1. Fibrinogen beta chain
  2. Fibrinogen gamma-B chain
IPR014716
Domain description: Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
Occurring in:
  1. Fibrinogen beta chain
  2. Fibrinogen gamma-B chain
IPR036056
Domain description: Fibrinogen-like, C-terminal
Occurring in:
  1. Fibrinogen beta chain
  2. Fibrinogen gamma-B chain

Structure domain

SCOP SCOP annotation
58189
Class: Low resolution protein structures
Fold: Blood clotting
Superfamily: Blood clotting
Occurring in:
  1. Fibrinogen alpha chain
  2. Fibrinogen beta chain
  3. Fibrinogen gamma-B chain
  4. FIBRINOGEN
The deposited structure of PDB entry 1deq contains 4 copies of SCOP domain 58189 (Blood clotting) in Fibrinogen alpha chain. Showing 1 copy in chain A.
The deposited structure of PDB entry 1deq contains 4 copies of SCOP domain 58189 (Blood clotting) in Fibrinogen beta chain. Showing 1 copy in chain B.
The deposited structure of PDB entry 1deq contains 4 copies of SCOP domain 58189 (Blood clotting) in Fibrinogen gamma-B chain. Showing 1 copy in chain C.
The deposited structure of PDB entry 1deq contains 2 copies of SCOP domain 58189 (Blood clotting) in FIBRINOGEN. Showing 1 copy in chain G [auth M].

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