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DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE COMPLEXED WITH DEOXY-GMP

Source organism: Escherichia virus T4
Biochemical function: (deoxy)nucleoside-phosphate kinase activity
Biological process: not assigned
Cellular component: not assigned

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EC 2.7.4.13: (Deoxy)nucleoside-phosphate kinase

Reaction catalysed:
ATP + a 2'-deoxyribonucleoside phosphate = ADP + a 2'-deoxyribonucleoside diphosphate
Systematic name:
ATP:2'-deoxyribonucleoside-phosphate phosphotransferase
Alternative Name(s):
  • ATP:deoxynucleoside-phosphate phosphotransferase
  • Deoxynucleoside monophosphate kinase
  • Deoxynucleoside-5'-monophosphate kinase
  • Deoxyribonucleoside monophosphokinase

GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF21448
Domain description: Deoxynucleotide monophosphate kinase
Occurring in:
  1. Deoxynucleotide monophosphate kinase

InterPro InterPro annotations
IPR027417
Domain description: P-loop containing nucleoside triphosphate hydrolase
Occurring in:
  1. Deoxynucleotide monophosphate kinase
IPR023191
Domain description: Deoxynucleotide monophosphate kinase, N-terminal
Occurring in:
  1. Deoxynucleotide monophosphate kinase

Structure domains

CATH CATH domains
3.40.50.300
Class: Alpha Beta
Architecture: 3-Layer(aba) Sandwich
Topology: Rossmann fold
Homology: P-loop containing nucleotide triphosphate hydrolases
Occurring in:
  1. Deoxynucleotide monophosphate kinase
The deposited structure of PDB entry 1dek contains 2 copies of CATH domain 3.40.50.300 (Rossmann fold) in Deoxynucleotide monophosphate kinase. Showing 1 copy in chain A.
1.10.238.70
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Recoverin; domain 1
Homology: Recoverin; domain 1
Occurring in:
  1. Deoxynucleotide monophosphate kinase
The deposited structure of PDB entry 1dek contains 2 copies of CATH domain 1.10.238.70 (Recoverin; domain 1) in Deoxynucleotide monophosphate kinase. Showing 1 copy in chain A.
SCOP SCOP annotation
52541
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Occurring in:
  1. Deoxynucleotide monophosphate kinase
The deposited structure of PDB entry 1dek contains 2 copies of SCOP domain 52541 (Nucleotide and nucleoside kinases) in Deoxynucleotide monophosphate kinase. Showing 1 copy in chain A.

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