EC 2.7.7.6: DNA-directed RNA polymerase
Reaction catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Systematic name:
Nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed)
Alternative Name(s):
- C RNA formation factors
- C ribonucleic acid formation factors
- DNA-dependent RNA nucleotidyltransferase
- DNA-dependent RNA polymerase
- DNA-dependent ribonucleate nucleotidyltransferase
- Deoxyribonucleic acid-dependent ribonucleic acid polymerase
- RNA nucleotidyltransferase
- RNA nucleotidyltransferase (DNA-directed)
- RNA polymerase
- RNA polymerase I
- RNA polymerase II
- RNA polymerase III
- RNA transcriptase
- Ribonucleate nucleotidyltransferase
- Ribonucleate polymerase
- Ribonucleic acid nucleotidyltransferase
- Ribonucleic acid polymerase
- Ribonucleic acid transcriptase
- Ribonucleic polymerase
- Ribonucleic transcriptase
- Transcriptase
EC 3.5.1.28: N-acetylmuramoyl-L-alanine amidase
Reaction catalysed:
Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides
Systematic name:
Peptidoglycan amidohydrolase
Alternative Name(s):
- Acetylmuramoyl-alanine amidase
- Acetylmuramyl-L-alanine amidase
- Acetylmuramyl-alanine amidase
- Murein hydrolase
- N-acetylmuramic acid L-alanine amidase
- N-acetylmuramoyl-L-alanine amidase type I
- N-acetylmuramoyl-L-alanine amidase type II
- N-acetylmuramyl-L-alanine amidase
- N-acetylmuramylalanine amidase
- N-acylmuramyl-L-alanine amidase
GO terms
Biochemical function:
- 5'-3' RNA polymerase activity
- nucleotidyltransferase activity
- transferase activity
- DNA-directed 5'-3' RNA polymerase activity
- DNA binding
- mitochondrial promoter sequence-specific DNA binding
- metal ion binding
- hydrolase activity
- N-acetylmuramoyl-L-alanine amidase activity
- zinc ion binding
- catalytic activity
Biological process:
Cellular component:
Sequence families
Protein families (Pfam)
InterPro annotations
IPR036505
Domain description:
N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily
Occurring in:
Occurring in:
IPR046950
Domain description:
DNA-directed RNA polymerase, C-terminal domain, phage-type
Occurring in:
Occurring in:
IPR024075
Domain description:
DNA-directed RNA polymerase, helix hairpin domain superfamily
Occurring in:
Occurring in:
IPR037159
Domain description:
DNA-directed RNA polymerase, N-terminal domain superfamily
Occurring in:
Occurring in:
Structure domains
CATH domains
3.30.70.370
Class:
Alpha Beta
Architecture:
2-Layer Sandwich
Topology:
Alpha-Beta Plaits
Homology:
Alpha-Beta Plaits
Occurring in:
1.10.150.20
Class:
Mainly Alpha
Architecture:
Orthogonal Bundle
Topology:
DNA polymerase; domain 1
Homology:
5' to 3' exonuclease, C-terminal subdomain
Occurring in:
1.10.287.280
Class:
Mainly Alpha
Architecture:
Orthogonal Bundle
Topology:
Helix Hairpins
Homology:
Helix Hairpins
Occurring in:
1.10.287.260
Class:
Mainly Alpha
Architecture:
Orthogonal Bundle
Topology:
Helix Hairpins
Homology:
Helix Hairpins
Occurring in:
1.10.1320.10
Class:
Mainly Alpha
Architecture:
Orthogonal Bundle
Topology:
T7 RNA polymerase; domain 1
Homology:
DNA-directed RNA polymerase, N-terminal domain
Occurring in: