› 1jrf

Solution NMR

NMR Solution Structure of the Viral Receptor Domain of Tva

Released:
DOI: 10.2210/pdb1jrf/pdb
PDB entry 1jrf coloured by chain, ensemble of 20 models, front view.
PDB entry 1jrf coloured by chain, ensemble of 20 models, side view.
PDB entry 1jrf coloured by chain, ensemble of 20 models, top view.
Source organism: Coturnix japonica
Primary publication:
Solution structure of the viral receptor domain of Tva and its implications in viral entry.
Wang QY, Huang W, Dolmer K, Gettins PG, Rong L
J Virol 76 2848-56 (2002)
PMID: 11861852

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-161357 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Subgroup A Rous sarcoma virus receptor pg950 Chain: A
Molecule details ›
Chain: A
Length: 47 amino acids
Theoretical weight: 5.07 KDa
Source organism: Coturnix japonica
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P98162 (Residues: 28-72; Coverage: 33%)
Sequence domains: Low-density lipoprotein receptor domain class A
Structure domains: Low-density Lipoprotein Receptor

Ligands and Environments

1 bound ligand:
Ligand CA 1 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli BL21

Quick links

Citations

3 review citations

Structure and physiologic function of the low-density lipoprotein receptor.
Jeon et al. (2005)
2 more

2 mentions without citation

The FEATURE framework for protein function annotation: modeling new functions, improving performance, and extending to novel applications.
Halperin et al. (2008)
1 more