› 188d

X-ray diffraction
2.2Å resolution

HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION

Released:
DOI: 10.2210/pdb188d/pdb
PDB entry 188d coloured by chain, front view.
PDB entry 188d coloured by chain, side view.
PDB entry 188d coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Hydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition.
Eisenstein M, Shakked Z
J Mol Biol 248 662-78 (1995)
PMID: 7752232

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113366 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3') Chain: A
Molecule details ›
Chain: A
Length: 8 nucleotides
Theoretical weight: 2.43 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P43212
Unit cell:
a: 42.74Å b: 42.74Å c: 24.57Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.183 not available not available
Expression system: Not provided

Quick links

Citations

9 review citations

Origins of specificity in protein-DNA recognition.
Rohs et al. (2010)
8 more

3 mentions without citation

Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy.
Zou et al. (2016)
2 more