EMD-9580

Single-particle
4.1 Å
EMD-9580
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Deposition: 21/07/2018
Map released: 12/06/2019
Last modified: 12/02/2020
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Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-9580
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EMICSS annotations (xml)

structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2)

EMD-9580

Single-particle
4.1 Å
EMD-9580
3D View Gallery
Deposition: 21/07/2018
Map released: 12/06/2019
Last modified: 12/02/2020
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Name: Influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2)
Complex [1]
Name: Influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2)
Natural source [1]
Organism: Thogotovirus
Recombinant Expression [1]
Organism Strain Cell Plasmid
Spodoptera - SF9 -
Molecular weight
Experimental Theoretical Method
270 kDa - -
Protein [3]
LEVO
Name: Polymerase 3
Number of copies: 1
UniProtKB PDBe-KB
Domains
Gene Ontology [2]
Biological process:
viral RNA genome replication
Molecular function:
RNA binding
Natural source
Organism: Influenza D virus
Molecular weight
Experimental Theoretical Method
- 83 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Spodoptera frugiperda - - -
LEVO
Name: RNA-directed RNA polymerase catalytic subunit
EC number: 2.7.7.48
Number of copies: 1
UniProtKB PDBe-KB
Domains
Gene Ontology [6]
Biological process:
DNA-templated transcription viral RNA genome replication
Molecular function:
RNA-dependent RNA polymerase activity nucleotide binding RNA binding RNA-directed 5'-3' RNA polymerase activity
Natural source
Organism: Influenza D virus
Molecular weight
Experimental Theoretical Method
- 86 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Spodoptera frugiperda - - -
LEVO
Name: Polymerase PB2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB
Domains
Gene Ontology [2]
Biological process:
viral RNA genome replication
Molecular function:
RNA binding
Natural source
Organism: Influenza D virus (D/swine/Oklahoma/1334/2011)
Strain: D/swine/Oklahoma/1334/2011
Molecular weight
Experimental Theoretical Method
- 88 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Spodoptera frugiperda - - -
RNA [2]
Name: RNA (5'-R(P*CP*UP*CP*CP*UP*GP*CP*UP*UP*AP*UP*GP*CP*U)-3')
Number of copies: 1
Natural source
Organism: synthetic construct
Molecular weight
Experimental Theoretical Method
- 4 kDa -
Name: RNA (5'-R(P*AP*GP*CP*AP*GP*UP*AP*GP*CP*AP*AP*GP*GP*AP*G)-3')
Number of copies: 1
Natural source
Organism: synthetic construct
Molecular weight
Experimental Theoretical Method
- 4 kDa -