EMD-4729
Structure of XBP1u-paused ribosome nascent chain complex (post-state)
EMD-4729
Single-particle3.0 Å
Deposition: 25/03/2019
Map released: 10/07/2019
Last modified: 30/10/2019
Name: Structure of XBP1u-paused ribosome nascent chain complex (post-state).
Summary:
- Complex
- Structure of XBP1u-paused ribosome nascent chain complex (post-state).
- ribosome
- tRNA
- X-box-binding protein 1
- mRNA
- RNA
- Protein
- X-box-binding protein 1
- uL2
- uL3
- uL4
- 60S ribosomal protein L5
- 60S ribosomal protein L6
- uL30
- eL8
- uL6
- Ribosomal protein L10 (Predicted)
- Ribosomal protein L11
- 60S ribosomal protein L13
- Ribosomal protein L14
- Ribosomal protein L15
- uL13
- uL22
- eL18
- eL19
- eL20
- eL21
- eL22
- eL14
- Ribosomal protein L24
- uL23
- Ribosomal protein L26
- 60S ribosomal protein L27
- uL15
- eL29
- eL30
- eL31
- eL32
- eL33
- eL34
- uL29
- 60S ribosomal protein L36
- Ribosomal protein L37
- eL38
- eL39
- eL40
- 60s ribosomal protein l41
- eL42
- ribosomal protein eL43
- eL28
- 60S acidic ribosomal protein P0
- uL11
- uS2
- 40S ribosomal protein S3a
- uS5
- Ribosomal protein S3
- 40S ribosomal protein S4
- Ribosomal protein S5
- 40S ribosomal protein S6
- 40S ribosomal protein S7
- 40S ribosomal protein S8
- Ribosomal protein S9 (Predicted)
- eS10
- Ribosomal protein S11
- 40S ribosomal protein S12
- ribosomal protein uS15
- uS11
- uS17
- Ribosomal protein S16
- eS17
- uS13
- eS19
- uS10
- eS21
- Ribosomal protein S15a
- Ribosomal protein S23
- eS24
- ribosomal protein eS25
- eS26
- 40S ribosomal protein S27
- Ribosomal protein S28
- uS14
- eS31
- ribosomal protein RACK1
- 40S ribosomal protein S30
- Ligand
Name:
Name:
Name:
X-box-binding protein 1
Name: Natural source [1]
Organism: Homo sapiens
Recombinant Expression [1]
Organism | Strain | Cell | Plasmid |
---|---|---|---|
Oryctolagus cuniculus | - | - | - |
Complex Portal [2]
ID | Name | Overlap |
---|---|---|
CPX-6600 | bZIP transcription factor complex, ATF6B-XBP1 | 0.50 |
CPX-6597 | bZIP transcription factor complex, ATF6-XBP1 | 0.50 |
mRNA
Name: Natural source [1]
Organism: Homo sapiens
Recombinant Expression [1]
Organism | Strain | Cell | Plasmid |
---|---|---|---|
synthetic construct | - | - | - |
E-tRNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Saccharomyces cerevisiae
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
P-tRNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Saccharomyces cerevisiae
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
28S ribosomal RNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 1 MDa | - |
5S rRNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 38 kDa | - |
5.8S ribosomal RNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 48 kDa | - |
18S ribosomal RNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 548 kDa | - |
mRNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Homo sapiens
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 1 kDa | - |
X-box-binding protein 1
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Homo sapiens
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 2 kDa | - |
Recombinant Expression
Organism | Strain | Cell | Plasmid |
---|---|---|---|
Oryctolagus cuniculus | - | - | - |
uL2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 26 kDa | - |
uL3
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 45 kDa | - |
uL4
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 41 kDa | - |
60S ribosomal protein L5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 34 kDa | - |
60S ribosomal protein L6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [3]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 28 kDa | - |
uL30
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 26 kDa | - |
eL8
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 26 kDa | - |
uL6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 21 kDa | - |
Ribosomal protein L10 (Predicted)
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit ribonucleoprotein complex ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit ribonucleoprotein complex ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 23 kDa | - |
Ribosomal protein L11
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome cytoplasm
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome cytoplasm
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 19 kDa | - |
60S ribosomal protein L13
Number of copies: 1
UniProtKB UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
Ribosomal protein L14
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
ribosome
translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 16 kDa | - |
Ribosomal protein L15
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic ribosome ribosomal subunit ribonucleoprotein complex cytosol ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic ribosome ribosomal subunit ribonucleoprotein complex cytosol ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
uL13
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 23 kDa | - |
uL22
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 17 kDa | - |
eL18
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 21 kDa | - |
eL19
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 21 kDa | - |
eL20
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 20 kDa | - |
eL21
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 18 kDa | - |
eL22
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
eL14
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 13 kDa | - |
Ribosomal protein L24
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
uL23
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 13 kDa | - |
Ribosomal protein L26
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [16]
Biological process:
cellular response to gamma radiation positive regulation of translation positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator translation DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator regulation of translation involved in cellular response to UV rRNA processing ribosomal large subunit biogenesis
Molecular function:
mRNA 5'-UTR binding structural constituent of ribosome
Cellular location:
synapse cytosolic ribosome cytosolic large ribosomal subunit nucleolus nucleoplasm
cellular response to gamma radiation positive regulation of translation positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator translation DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator regulation of translation involved in cellular response to UV rRNA processing ribosomal large subunit biogenesis
Molecular function:
mRNA 5'-UTR binding structural constituent of ribosome
Cellular location:
synapse cytosolic ribosome cytosolic large ribosomal subunit nucleolus nucleoplasm
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
60S ribosomal protein L27
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex cytosolic large ribosomal subunit ribosome rough endoplasmic reticulum
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex cytosolic large ribosomal subunit ribosome rough endoplasmic reticulum
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
uL15
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 16 kDa | - |
eL29
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 12 kDa | - |
eL30
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 10 kDa | - |
eL31
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 12 kDa | - |
eL32
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
eL33
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 12 kDa | - |
eL34
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 12 kDa | - |
uL29
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
60S ribosomal protein L36
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [3]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
Ribosomal protein L37
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [3]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 10 kDa | - |
eL38
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 8 kDa | - |
eL39
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 6 kDa | - |
eL40
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 6 kDa | - |
60s ribosomal protein l41
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 3 kDa | - |
eL42
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 12 kDa | - |
ribosomal protein eL43
Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 10 kDa | - |
eL28
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
60S acidic ribosomal protein P0
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 21 kDa | - |
uL11
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 16 kDa | - |
uS2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
40S ribosomal protein S3a
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
uS5
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
Ribosomal protein S3
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
apoptotic process cell division translation
Molecular function:
class I DNA-(apurinic or apyrimidinic site) endonuclease activity structural constituent of ribosome
Cellular location:
mitochondrial inner membrane cytosolic small ribosomal subunit nucleolus
apoptotic process cell division translation
Molecular function:
class I DNA-(apurinic or apyrimidinic site) endonuclease activity structural constituent of ribosome
Cellular location:
mitochondrial inner membrane cytosolic small ribosomal subunit nucleolus
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 25 kDa | - |
40S ribosomal protein S4
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
ribonucleoprotein complex ribosome
translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
ribonucleoprotein complex ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 29 kDa | - |
Ribosomal protein S5
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
small ribosomal subunit
translation
Molecular function:
RNA binding structural constituent of ribosome
Cellular location:
small ribosomal subunit
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 21 kDa | - |
40S ribosomal protein S6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [3]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 27 kDa | - |
40S ribosomal protein S7
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
centrosome ribonucleoprotein complex ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
centrosome ribonucleoprotein complex ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 21 kDa | - |
40S ribosomal protein S8
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome cytosolic ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome cytosolic ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 24 kDa | - |
Ribosomal protein S9 (Predicted)
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 21 kDa | - |
eS10
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
Ribosomal protein S11
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome cytosolic small ribosomal subunit
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome cytosolic small ribosomal subunit
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 17 kDa | - |
40S ribosomal protein S12
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [3]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 13 kDa | - |
ribosomal protein uS15
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 17 kDa | - |
uS11
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
uS17
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
Ribosomal protein S16
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cellular response to leukemia inhibitory factor translation
Molecular function:
structural constituent of ribosome
Cellular location:
synapse cytosolic small ribosomal subunit
cellular response to leukemia inhibitory factor translation
Molecular function:
structural constituent of ribosome
Cellular location:
synapse cytosolic small ribosomal subunit
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 16 kDa | - |
eS17
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
uS13
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 16 kDa | - |
eS19
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
uS10
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
eS21
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 9 kDa | - |
Ribosomal protein S15a
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribonucleoprotein complex ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
Ribosomal protein S23
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [4]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
rough endoplasmic reticulum small ribosomal subunit
translation
Molecular function:
structural constituent of ribosome
Cellular location:
rough endoplasmic reticulum small ribosomal subunit
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
eS24
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
ribosomal protein eS25
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 8 kDa | - |
eS26
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Oryctolagus cuniculus
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
40S ribosomal protein S27
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
rRNA processing translation
Molecular function:
structural constituent of ribosome metal ion binding
Cellular location:
cytosol ribonucleoprotein complex ribosome postsynaptic density cytosolic small ribosomal subunit nucleus
rRNA processing translation
Molecular function:
structural constituent of ribosome metal ion binding
Cellular location:
cytosol ribonucleoprotein complex ribosome postsynaptic density cytosolic small ribosomal subunit nucleus
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 9 kDa | - |
Ribosomal protein S28
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
translation rRNA processing ribosomal small subunit biogenesis cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome small-subunit processome synapse polysomal ribosome cytosolic small ribosomal subunit
translation rRNA processing ribosomal small subunit biogenesis cytoplasmic translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome small-subunit processome synapse polysomal ribosome cytosolic small ribosomal subunit
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 7 kDa | - |
uS14
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 6 kDa | - |
eS31
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 7 kDa | - |
ribosomal protein RACK1
Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 34 kDa | - |
40S ribosomal protein S30
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [3]
Biological process:
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
translation
Molecular function:
structural constituent of ribosome
Cellular location:
ribosome
Natural source
Organism: Rabbit
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 6 kDa | - |