EMD-21921
Cryo-EM structure of Bacillus subtilis RNA Polymerase in complex with HelD
EMD-21921
Single-particle3.36 Å
Deposition: 06/05/2020
Map released: 18/11/2020
Last modified: 23/11/2022
Name: DNA-directed RNA polymerase complex with helD
Summary:
DNA-directed RNA polymerase complex with helD
Name: Natural source [1]
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
442 kDa | - | - |
DNA-directed RNA polymerase subunit alpha
EC number: 2.7.7.6
Number of copies: 2
UniProtKB PDBe-KB AlphaFold DB
Name: EC number: 2.7.7.6
Number of copies: 2
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
DNA-templated transcription transcription, DNA-templated
Molecular function:
protein dimerization activity DNA binding DNA-directed 5'-3' RNA polymerase activity
Cellular location:
DNA-directed RNA polymerase complex cytoplasm
DNA-templated transcription transcription, DNA-templated
Molecular function:
protein dimerization activity DNA binding DNA-directed 5'-3' RNA polymerase activity
Cellular location:
DNA-directed RNA polymerase complex cytoplasm
Natural source
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 34 kDa | - |
DNA-directed RNA polymerase subunit beta
EC number: 2.7.7.6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: EC number: 2.7.7.6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
DNA-templated transcription transcription, DNA-templated response to antibiotic
Molecular function:
DNA-directed 5'-3' RNA polymerase activity DNA binding ribonucleoside binding
Cellular location:
DNA-directed RNA polymerase complex
DNA-templated transcription transcription, DNA-templated response to antibiotic
Molecular function:
DNA-directed 5'-3' RNA polymerase activity DNA binding ribonucleoside binding
Cellular location:
DNA-directed RNA polymerase complex
Natural source
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 133 kDa | - |
DNA-directed RNA polymerase subunit beta'
EC number: 2.7.7.6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: EC number: 2.7.7.6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 134 kDa | - |
UPF0356 protein YkzG
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
DNA-templated transcription transcription, DNA-templated
Molecular function:
DNA binding DNA-directed 5'-3' RNA polymerase activity
Cellular location:
DNA-directed RNA polymerase complex cytoplasm nucleoid
DNA-templated transcription transcription, DNA-templated
Molecular function:
DNA binding DNA-directed 5'-3' RNA polymerase activity
Cellular location:
DNA-directed RNA polymerase complex cytoplasm nucleoid
Natural source
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 8 kDa | - |
DNA-directed RNA polymerase subunit omega
EC number: 2.7.7.6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: EC number: 2.7.7.6
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 7 kDa | - |
DNA helicase IV
EC number: 3.6.4.12
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Name: EC number: 3.6.4.12
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
recombinational repair
Molecular function:
3'-5' DNA helicase activity ATP hydrolysis activity ATP binding DNA binding
Cellular location:
cytosol
recombinational repair
Molecular function:
3'-5' DNA helicase activity ATP hydrolysis activity ATP binding DNA binding
Cellular location:
cytosol
Natural source
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 90 kDa | - |