EMD-20432 Function and Biology

Kaposi's sarcoma-associated herpesvirus (KSHV), C5 portal vertex structure

Single particle reconstruction
4.3Å resolution
Overview of EMD-20432
Sample name: Human gammaherpesvirus 8
Number of unique components: 8

Human gammaherpesvirus 8

Virus type
Name: Human gammaherpesvirus 8
Virus type: VIRION
Virus isolate type: STRAIN
Virus enveloped: true
Virus empty: false
Natural host of the virus
Organism: Homo sapiens
Virus shell 1
Shell diameter (Å): 1250.0
Triangulation number: 16

Capsid vertex component 1 [HHV-8]

Protein type
Name: Capsid vertex component 1
Theoretical weight (MDa): 0.05
Number of copies: 1

Capsid vertex component 2 [HHV-8]

Protein type
Name: Capsid vertex component 2
Theoretical weight (MDa): 0.061
Number of copies: 2

Large tegument protein deneddylase [HHV-8]

Protein type
Name: Large tegument protein deneddylase
Theoretical weight (MDa): 0.29
Number of copies: 2

Major capsid protein [HHV-8]

Protein type
Name: Major capsid protein
Theoretical weight (MDa): 0.154
Number of copies: 4

Triplex capsid protein 1 [HHV-8]

Protein type
Name: Triplex capsid protein 1
Theoretical weight (MDa): 0.036
Number of copies: 2

Triplex capsid protein 2 [HHV-8]

Protein type
Name: Triplex capsid protein 2
Theoretical weight (MDa): 0.034
Number of copies: 4

Small capsomere-interacting protein [HHV-8]

Protein type
Name: Small capsomere-interacting protein
Theoretical weight (MDa): 0.019
Number of copies: 4