EMD-11247

Single-particle
2.8 Å
EMD-11247 Deposition: 30/06/2020
Map released: 14/10/2020
Last modified: 11/11/2020
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-11247

Complex I during turnover, open3

EMD-11247

Single-particle
2.8 Å
EMD-11247 Deposition: 30/06/2020
Map released: 14/10/2020
Last modified: 11/11/2020
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Name: Complex I during turnover, open3
Summary:
Complex [1]
Name: Complex I during turnover, open3
Natural source [1]
Organism: Ovis aries
Molecular weight
Experimental Theoretical Method
1 MDa - -
Protein [44]
Name: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
EC number: 7.1.1.2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 50 kDa -
Name: Mitochondrial complex I, 24 kDa subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 27 kDa -
Name: NADH:ubiquinone oxidoreductase core subunit S1
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 79 kDa -
Name: Mitochondrial complex I, 49 kDa subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 52 kDa -
Name: NADH:ubiquinone oxidoreductase core subunit S3
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 30 kDa -
Name: Mitochondrial complex I, PSST subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 24 kDa -
Name: Mitochondrial complex I, TYKY subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 24 kDa -
Name: NADH-ubiquinone oxidoreductase chain 3
EC number: 7.1.1.2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 13 kDa -
Name: NADH-ubiquinone oxidoreductase chain 1
EC number: 7.1.1.2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 35 kDa -
Name: NADH-ubiquinone oxidoreductase chain 6
EC number: 7.1.1.2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 19 kDa -
Name: NADH-ubiquinone oxidoreductase chain 4L
EC number: 7.1.1.2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 10 kDa -
Name: NADH-ubiquinone oxidoreductase chain 5
EC number: 7.1.1.2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 68 kDa -
Name: NADH-ubiquinone oxidoreductase chain 4
EC number: 7.1.1.2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 52 kDa -
Name: NADH-ubiquinone oxidoreductase chain 2
EC number: 7.1.1.2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 39 kDa -
Name: Mitochondrial complex I, B14.7 subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 14 kDa -
Name: NADH:ubiquinone oxidoreductase subunit B5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 21 kDa -
Name: Acyl carrier protein
Number of copies: 2
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 17 kDa -
Name: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 20 kDa -
Name: Mitochondrial complex I, PDSW subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 20 kDa -
Name: Mitochondrial complex I, 10 kDa subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 11 kDa -
Name: Mitochondrial complex I, 13 kDa subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 13 kDa -
Name: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 19 kDa -
Name: NADH:ubiquinone oxidoreductase subunit A9
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 43 kDa -
Name: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 11 kDa -
Name: Mitochondrial complex I, B13 subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 13 kDa -
Name: NADH:ubiquinone oxidoreductase subunit A6
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 16 kDa -
Name: Mitochondrial complex I, B14.5a subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 12 kDa -
Name: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 17 kDa -
Name: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 40 kDa -
Name: NADH:ubiquinone oxidoreductase subunit S5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 12 kDa -
Name: NADH:ubiquinone oxidoreductase subunit A3
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 9 kDa -
Name: NADH:ubiquinone oxidoreductase subunit B3
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 11 kDa -
Name: NADH dehydrogenase [ubiquinone] 1 subunit C2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 14 kDa -
Name: NADH:ubiquinone oxidoreductase subunit B4
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 15 kDa -
Name: Mitochondrial complex I, B16.6 subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 16 kDa -
Name: Mitochondrial complex I, B17 subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 15 kDa -
Name: NADH:ubiquinone oxidoreductase subunit B7
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 16 kDa -
Name: NADH:ubiquinone oxidoreductase subunit B9
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 21 kDa -
Name: NADH:ubiquinone oxidoreductase subunit B2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 12 kDa -
Name: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 21 kDa -
Name: Mitochondrial complex I, ESSS subunit
Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Domains
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 17 kDa -
Name: Mitochondrial complex I, KFYI subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 8 kDa -
Name: Mitochondrial complex I, MNLL subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 7 kDa -
Name: Mitochondrial complex I, MWFE subunit
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Natural source
Organism: Sheep
Molecular weight
Experimental Theoretical Method
- 8 kDa -
Ligand [14]
Name: IRON/SULFUR CLUSTER
HET code: SF4
Number of copies: 6
ChEBI
Molecular weight
Experimental Theoretical Method
- 351 Da -
Name: FLAVIN MONONUCLEOTIDE
HET code: FMN
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 456 Da -
Name: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
HET code: NAI
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 665 Da -
Name: FE2/S2 (INORGANIC) CLUSTER
HET code: FES
Number of copies: 2
ChEBI
Molecular weight
Experimental Theoretical Method
- 175 Da -
Name: POTASSIUM ION
HET code: K
Number of copies: 1
ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 39 Da -
Name: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
HET code: 3PE
Number of copies: 14
ChEBI
Molecular weight
Experimental Theoretical Method
- 748 Da -
Name: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
HET code: PC1
Number of copies: 6
ChEBI
Molecular weight
Experimental Theoretical Method
- 790 Da -
Name: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione
HET code: DCQ
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 322 Da -
Name: CARDIOLIPIN
HET code: CDL
Number of copies: 8
Molecular weight
Experimental Theoretical Method
- 1 kDa -
Name: S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate
HET code: ZMP
Number of copies: 2
Molecular weight
Experimental Theoretical Method
- 568 Da -
Name: ZINC ION
HET code: ZN
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 65 Da -
Name: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
HET code: NDP
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 745 Da -
Name: ADENOSINE MONOPHOSPHATE
HET code: AMP
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 347 Da -
Name: MYRISTIC ACID
HET code: MYR
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 228 Da -