EMD-0880

Single-particle
4.4 Å
EMD-0880
3D View Gallery
Deposition: 05/12/2019
Map released: 29/07/2020
Last modified: 11/08/2021
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-0880
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3D volume (map.gz) Experimental metadata (xml)
Map-only Validation report (pdf.gz) Map-only Validation report (cif.gz) Map-only Validation report (xml.gz)
Map and PDB model 6lgl summary report (pdf.gz) Map and 6lgl FULL report (pdf.gz)
EMICSS annotations (xml)

The atomic structure of varicella-zoster virus A-capsid

EMD-0880

Single-particle
4.4 Å
EMD-0880
3D View Gallery
Deposition: 05/12/2019
Map released: 29/07/2020
Last modified: 11/08/2021
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Method: Single-particle
Aggregation State: Particle
Specimen preparation [1]
Buffer
pH: 7.4
Vitrification
Cryogen name: ETHANE
Microscopy [1]
Microscope: FEI TITAN KRIOS
Illumination mode: FLOOD BEAM
Imaging mode: BRIGHT FIELD
Electron source: FIELD EMISSION GUN
Acceleration voltage: 300 kV
Image Recording [1]
Detector model: GATAN K2 SUMMIT (4k x 4k)
Detector mode: SUPER-RESOLUTION
Average electron dose per image: 56.0 e/Å2
Image processing [1]
Final reconstruction
Resolution: 4.4 Å ( BY AUTHOR)
Resolution method: FSC 0.143 CUT-OFF
Number of images used: 22983
⌯ Applied Symmetry
Point group: I
⦨ Initial angle assignment
Type: PROJECTION MATCHING
⦩ Final angle assignment
Type: MAXIMUM LIKELIHOOD
Map
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Annotation details: Cryo-EM structure of varicella-zoster virus A-capsid
⬡ Geometry
X Y Z
Dimensions 1280 1280 1280
Origin 0 0 0
Spacing 1280 1280 1280
Voxel size 1.307 Å 1.307 Å 1.307 Å
Contour list
Primary Level Source
True 3.0 AUTHOR