EMD-0880 Experiments and Validation

The atomic structure of varicella-zoster virus A-capsid

Single particle reconstruction
Overview of EMD-0880
Sample name: Human alphaherpesvirus 3
Organisms: Human alphaherpesvirus 3, HHV-3,Human alphaherpesvirus 3
Fitted atomic model: 6lgl

Map parameters

Recommended contour level: 3.00 (author)
Number of grid points: 1280 × 1280 × 1280
Voxel size: 1.31 × 1.31 × 1.31 Å
Minimum density: -13.588
Maximum density: 22.144
Average density: -0.009
Standard deviation: 1.978

Sample information

Sample name: Human alphaherpesvirus 3
Proteins: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, Triplex capsid protein 2
Virus: Human alphaherpesvirus 3

Validation information

Experimental information


Image processing

Applied symmetry: I
Number of particles: 22983


Target criteria: REAL


Microscope model: FEI TITAN KRIOS
Electron source: FIELD EMISSION GUN
Electron dose (e/A**2): 56.0
Holder model: OTHER


Specimen state: particle
Cryogen: ETHANE