EMD-0661
70S Elongation Competent Ribosome
EMD-0661
Single-particle3.9 Å
Deposition: 14/03/2019Map released: 29/05/2019
Last modified: 20/03/2024
Name: 70S elongation competent ribosome
Summary:
- Complex
- RNA
- Protein
- 50S ribosomal protein L25
- 50S ribosomal protein L2
- 50S ribosomal protein L3
- 50S ribosomal protein L4
- 50S ribosomal protein L5
- 50S ribosomal protein L6
- 50S ribosomal protein L9
- 50S ribosomal protein L13
- 50S ribosomal protein L14
- 50S ribosomal protein L15
- 50S ribosomal protein L16
- 50S ribosomal protein L17
- 50S ribosomal protein L18
- 50S ribosomal protein L19
- 50S ribosomal protein L20
- 50S ribosomal protein L21
- 50S ribosomal protein L22
- 50S ribosomal protein L23
- 50S ribosomal protein L24
- 50S ribosomal protein L27
- 50S ribosomal protein L29
- 50S ribosomal protein L30
- 50S ribosomal protein L31
- 50S ribosomal protein L32
- 50S ribosomal protein L33
- 50S ribosomal protein L34
- 50S ribosomal protein L35
- 50S ribosomal protein L36
- 50S ribosomal protein L11
- 30S ribosomal protein S3
- 30S ribosomal protein S4
- 30S ribosomal protein S5
- 30S ribosomal protein S6
- 30S ribosomal protein S7
- 30S ribosomal protein S8
- 30S ribosomal protein S9
- 30S ribosomal protein S10
- 30S ribosomal protein S11
- 30S ribosomal protein S12
- 30S ribosomal protein S13
- 30S ribosomal protein S14
- 30S ribosomal protein S15
- 30S ribosomal protein S16
- 30S ribosomal protein S17
- 30S ribosomal protein S18
- 30S ribosomal protein S19
- 30S ribosomal protein S20
- 30S ribosomal protein S2
- 30S ribosomal protein S21
Name: 70S elongation competent ribosome
Natural source [1]
Organism: Escherichia coli
Complex Portal [1]
| ID | Name | Overlap |
|---|---|---|
| CPX-3807 | 50S large ribosomal subunit | 0.54 |
Name: 5S rRNA
Number of copies: 1
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 37 kDa | - |
Name: 23S rRNA
Number of copies: 1
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 921 kDa | - |
Name: 16S rRNA
Number of copies: 1
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 495 kDa | - |
Name: P-tRNA
Number of copies: 1
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 24 kDa | - |
Name: 50S ribosomal protein L25
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation ribosomal large subunit assembly response to radiation translation negative regulation of translation
Molecular function:
5S rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation ribosomal large subunit assembly response to radiation translation negative regulation of translation
Molecular function:
5S rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 10 kDa | - |
Name: 50S ribosomal protein L2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [13]
Biological process:
negative regulation of DNA-templated DNA replication initiation negative regulation of DNA-dependent DNA replication initiation cytoplasmic translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome zinc ion binding transferase activity RNA binding rRNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol DnaA-L2 complex
negative regulation of DNA-templated DNA replication initiation negative regulation of DNA-dependent DNA replication initiation cytoplasmic translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome zinc ion binding transferase activity RNA binding rRNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol DnaA-L2 complex
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 29 kDa | - |
Name: 50S ribosomal protein L3
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosol cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosol cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 22 kDa | - |
Name: 50S ribosomal protein L4
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [24]
Biological process:
negative regulation of DNA-templated transcription DNA-templated transcription termination transcriptional attenuation negative regulation of cytoplasmic translation cytoplasmic translation translation response to antibiotic negative regulation of endoribonuclease activity negative regulation of translation negative regulation of transcription, DNA-templated DNA-templated transcription, termination ribosome assembly
Molecular function:
DNA binding mRNA 5'-UTR binding RNA-binding transcription regulator activity translation repressor activity endoribonuclease inhibitor activity structural constituent of ribosome rRNA binding
Cellular location:
cytosol large ribosomal subunit cytoplasm cytosolic large ribosomal subunit polysomal ribosome
negative regulation of DNA-templated transcription DNA-templated transcription termination transcriptional attenuation negative regulation of cytoplasmic translation cytoplasmic translation translation response to antibiotic negative regulation of endoribonuclease activity negative regulation of translation negative regulation of transcription, DNA-templated DNA-templated transcription, termination ribosome assembly
Molecular function:
DNA binding mRNA 5'-UTR binding RNA-binding transcription regulator activity translation repressor activity endoribonuclease inhibitor activity structural constituent of ribosome rRNA binding
Cellular location:
cytosol large ribosomal subunit cytoplasm cytosolic large ribosomal subunit polysomal ribosome
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 22 kDa | - |
Name: 50S ribosomal protein L5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
tRNA binding RNA binding 5S rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
tRNA binding RNA binding 5S rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 20 kDa | - |
Name: 50S ribosomal protein L6
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
response to antibiotic cytoplasmic translation ribosomal large subunit assembly
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
response to antibiotic cytoplasmic translation ribosomal large subunit assembly
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 18 kDa | - |
Name: 50S ribosomal protein L9
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 50S ribosomal protein L13
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [12]
Biological process:
cytoplasmic translation translation negative regulation of translation
Molecular function:
mRNA 5'-UTR binding large ribosomal subunit rRNA binding zinc ion binding mRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm ribosome cytosol
cytoplasmic translation translation negative regulation of translation
Molecular function:
mRNA 5'-UTR binding large ribosomal subunit rRNA binding zinc ion binding mRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm ribosome cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 50S ribosomal protein L14
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 50S ribosomal protein L15
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 50S ribosomal protein L16
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
tRNA binding rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
tRNA binding rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 50S ribosomal protein L17
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytoplasm cytosol
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 50S ribosomal protein L18
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome 5S rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome 5S rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 50S ribosomal protein L19
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 50S ribosomal protein L20
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [11]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
mRNA regulatory element binding translation repressor activity mRNA binding large ribosomal subunit rRNA binding translation repressor activity, mRNA regulatory element binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
mRNA regulatory element binding translation repressor activity mRNA binding large ribosomal subunit rRNA binding translation repressor activity, mRNA regulatory element binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 50S ribosomal protein L21
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
cytoplasmic translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 50S ribosomal protein L22
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [15]
Biological process:
cytosolic ribosome assembly mature ribosome assembly assembly of large subunit precursor of preribosome cytoplasmic translation translation ribosome assembly response to antibiotic
Molecular function:
large ribosomal subunit rRNA binding rRNA binding structural constituent of ribosome
Cellular location:
large ribosomal subunit cytoplasm cytosolic large ribosomal subunit polysomal ribosome cytosol
cytosolic ribosome assembly mature ribosome assembly assembly of large subunit precursor of preribosome cytoplasmic translation translation ribosome assembly response to antibiotic
Molecular function:
large ribosomal subunit rRNA binding rRNA binding structural constituent of ribosome
Cellular location:
large ribosomal subunit cytoplasm cytosolic large ribosomal subunit polysomal ribosome cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 50S ribosomal protein L23
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 50S ribosomal protein L24
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 50S ribosomal protein L27
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [14]
Biological process:
cytosolic ribosome assembly cytoplasmic translation regulation of cell growth translation mature ribosome assembly assembly of large subunit precursor of preribosome positive regulation of ribosome biogenesis ribosomal large subunit assembly
Molecular function:
rRNA binding tRNA binding structural constituent of ribosome ribosome binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytosolic ribosome assembly cytoplasmic translation regulation of cell growth translation mature ribosome assembly assembly of large subunit precursor of preribosome positive regulation of ribosome biogenesis ribosomal large subunit assembly
Molecular function:
rRNA binding tRNA binding structural constituent of ribosome ribosome binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 50S ribosomal protein L29
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 7 kDa | - |
Name: 50S ribosomal protein L30
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: 50S ribosomal protein L31
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation negative regulation of cytoplasmic translational initiation translation translational initiation
Molecular function:
structural constituent of ribosome rRNA binding zinc ion binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
cytoplasmic translation negative regulation of cytoplasmic translational initiation translation translational initiation
Molecular function:
structural constituent of ribosome rRNA binding zinc ion binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 7 kDa | - |
Name: 50S ribosomal protein L32
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
cytoplasmic translation ribosomal large subunit assembly response to reactive oxygen species translation response to radiation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation ribosomal large subunit assembly response to reactive oxygen species translation response to radiation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: 50S ribosomal protein L33
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation translation response to antibiotic ribosomal large subunit assembly
Molecular function:
tRNA binding structural constituent of ribosome
Cellular location:
large ribosomal subunit cytoplasm cytosol cytosolic large ribosomal subunit
cytoplasmic translation translation response to antibiotic ribosomal large subunit assembly
Molecular function:
tRNA binding structural constituent of ribosome
Cellular location:
large ribosomal subunit cytoplasm cytosol cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: 50S ribosomal protein L34
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 5 kDa | - |
Name: 50S ribosomal protein L35
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
large ribosomal subunit cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
large ribosomal subunit cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 7 kDa | - |
Name: 50S ribosomal protein L36
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 4 kDa | - |
Name: 50S ribosomal protein L11
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [12]
Biological process:
cytoplasmic translation stringent response ribosomal large subunit assembly translation translational termination
Molecular function:
rRNA binding structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytosol cytoplasm
cytoplasmic translation stringent response ribosomal large subunit assembly translation translational termination
Molecular function:
rRNA binding structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 30S ribosomal protein S3
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 23 kDa | - |
Name: 30S ribosomal protein S4
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [19]
Biological process:
ribosomal small subunit biogenesis DNA-templated transcription termination cytoplasmic translation transcription antitermination DNA-templated transcription, termination response to antibiotic negative regulation of translational initiation ribosomal small subunit assembly positive regulation of translational fidelity maintenance of translational fidelity
Molecular function:
mRNA regulatory element binding translation repressor activity structural constituent of ribosome mRNA 5'-UTR binding rRNA binding translation repressor activity, mRNA regulatory element binding
Cellular location:
cytosolic small ribosomal subunit cytosol small ribosomal subunit cytoplasm
ribosomal small subunit biogenesis DNA-templated transcription termination cytoplasmic translation transcription antitermination DNA-templated transcription, termination response to antibiotic negative regulation of translational initiation ribosomal small subunit assembly positive regulation of translational fidelity maintenance of translational fidelity
Molecular function:
mRNA regulatory element binding translation repressor activity structural constituent of ribosome mRNA 5'-UTR binding rRNA binding translation repressor activity, mRNA regulatory element binding
Cellular location:
cytosolic small ribosomal subunit cytosol small ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 23 kDa | - |
Name: 30S ribosomal protein S5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation maintenance of translational fidelity response to antibiotic translation ribosomal small subunit assembly
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytoplasm cytosolic small ribosomal subunit
cytoplasmic translation maintenance of translational fidelity response to antibiotic translation ribosomal small subunit assembly
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytoplasm cytosolic small ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 15 kDa | - |
Name: 30S ribosomal protein S6
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 30S ribosomal protein S7
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 16 kDa | - |
Name: 30S ribosomal protein S8
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation regulation of mRNA stability ribosomal small subunit assembly regulation of translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic small ribosomal subunit
cytoplasmic translation regulation of mRNA stability ribosomal small subunit assembly regulation of translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic small ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 30S ribosomal protein S9
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
cytoplasmic translation translation
Molecular function:
tRNA binding RNA binding structural constituent of ribosome
Cellular location:
cytosol cytoplasm small ribosomal subunit cytosolic small ribosomal subunit
cytoplasmic translation translation
Molecular function:
tRNA binding RNA binding structural constituent of ribosome
Cellular location:
cytosol cytoplasm small ribosomal subunit cytosolic small ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 14 kDa | - |
Name: 30S ribosomal protein S10
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [14]
Biological process:
regulation of DNA-templated transcription elongation regulation of DNA-templated transcription, elongation cytoplasmic translation ribosome biogenesis translation transcription antitermination
Molecular function:
structural constituent of ribosome transcription antitermination factor activity, RNA binding tRNA binding
Cellular location:
transcription elongation factor complex cytosolic small ribosomal subunit cytoplasm small ribosomal subunit cytosol
regulation of DNA-templated transcription elongation regulation of DNA-templated transcription, elongation cytoplasmic translation ribosome biogenesis translation transcription antitermination
Molecular function:
structural constituent of ribosome transcription antitermination factor activity, RNA binding tRNA binding
Cellular location:
transcription elongation factor complex cytosolic small ribosomal subunit cytoplasm small ribosomal subunit cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 30S ribosomal protein S11
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ribosomal small subunit assembly
Molecular function:
mRNA 5'-UTR binding structural constituent of ribosome small ribosomal subunit rRNA binding
Cellular location:
cytosolic small ribosomal subunit cytoplasm cytosol
cytoplasmic translation translation maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ribosomal small subunit assembly
Molecular function:
mRNA 5'-UTR binding structural constituent of ribosome small ribosomal subunit rRNA binding
Cellular location:
cytosolic small ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 30S ribosomal protein S12
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [17]
Biological process:
cytoplasmic translation translation RNA folding response to antibiotic maintenance of translational fidelity positive regulation of RNA splicing Group I intron splicing
Molecular function:
molecular adaptor activity DNA binding misfolded RNA binding structural constituent of ribosome tRNA binding rRNA binding
Cellular location:
ribosome cytosolic small ribosomal subunit cytoplasm cytosol
cytoplasmic translation translation RNA folding response to antibiotic maintenance of translational fidelity positive regulation of RNA splicing Group I intron splicing
Molecular function:
molecular adaptor activity DNA binding misfolded RNA binding structural constituent of ribosome tRNA binding rRNA binding
Cellular location:
ribosome cytosolic small ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 13 kDa | - |
Name: 30S ribosomal protein S13
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
cytoplasmic translation translation
Molecular function:
tRNA binding rRNA binding structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit small ribosomal subunit cytosol cytoplasm
cytoplasmic translation translation
Molecular function:
tRNA binding rRNA binding structural constituent of ribosome
Cellular location:
cytosolic small ribosomal subunit small ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 12 kDa | - |
Name: 30S ribosomal protein S14
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
cytoplasmic translation translation ribosomal small subunit assembly
Molecular function:
tRNA binding structural constituent of ribosome rRNA binding
Cellular location:
small ribosomal subunit cytosolic small ribosomal subunit cytoplasm
cytoplasmic translation translation ribosomal small subunit assembly
Molecular function:
tRNA binding structural constituent of ribosome rRNA binding
Cellular location:
small ribosomal subunit cytosolic small ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 11 kDa | - |
Name: 30S ribosomal protein S15
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [13]
Biological process:
cytoplasmic translation ribosomal small subunit assembly regulation of translation translation
Molecular function:
mRNA base-pairing translational repressor activity mRNA base-pairing post-transcriptional repressor activity structural constituent of ribosome rRNA binding small ribosomal subunit rRNA binding mRNA binding involved in posttranscriptional gene silencing
Cellular location:
cytoplasm cytosolic small ribosomal subunit cytosol
cytoplasmic translation ribosomal small subunit assembly regulation of translation translation
Molecular function:
mRNA base-pairing translational repressor activity mRNA base-pairing post-transcriptional repressor activity structural constituent of ribosome rRNA binding small ribosomal subunit rRNA binding mRNA binding involved in posttranscriptional gene silencing
Cellular location:
cytoplasm cytosolic small ribosomal subunit cytosol
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 10 kDa | - |
Name: 30S ribosomal protein S16
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation ribosomal small subunit assembly translation
Molecular function:
DNA endonuclease activity structural constituent of ribosome four-way junction DNA binding endodeoxyribonuclease activity
Cellular location:
small ribosomal subunit cytoplasm cytosolic small ribosomal subunit
cytoplasmic translation ribosomal small subunit assembly translation
Molecular function:
DNA endonuclease activity structural constituent of ribosome four-way junction DNA binding endodeoxyribonuclease activity
Cellular location:
small ribosomal subunit cytoplasm cytosolic small ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 30S ribosomal protein S17
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [11]
Biological process:
cytoplasmic translation ribosomal small subunit assembly translation response to antibiotic
Molecular function:
zinc ion binding molecular adaptor activity rRNA binding small ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic small ribosomal subunit
cytoplasmic translation ribosomal small subunit assembly translation response to antibiotic
Molecular function:
zinc ion binding molecular adaptor activity rRNA binding small ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic small ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 30S ribosomal protein S18
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |
Name: 30S ribosomal protein S19
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 30S ribosomal protein S20
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation ribosomal small subunit assembly translation
Molecular function:
structural constituent of ribosome ornithine decarboxylase inhibitor activity small ribosomal subunit rRNA binding
Cellular location:
small ribosomal subunit cytosol cytosolic small ribosomal subunit cytoplasm
cytoplasmic translation ribosomal small subunit assembly translation
Molecular function:
structural constituent of ribosome ornithine decarboxylase inhibitor activity small ribosomal subunit rRNA binding
Cellular location:
small ribosomal subunit cytosol cytosolic small ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 9 kDa | - |
Name: 30S ribosomal protein S2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation ribosomal small subunit assembly translation
Molecular function:
structural constituent of ribosome zinc ion binding
Cellular location:
cytosolic small ribosomal subunit cytoplasm
cytoplasmic translation ribosomal small subunit assembly translation
Molecular function:
structural constituent of ribosome zinc ion binding
Cellular location:
cytosolic small ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 24 kDa | - |
Name: 30S ribosomal protein S21
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Natural source
Organism: Escherichia coli
Molecular weight
| Experimental | Theoretical | Method |
|---|---|---|
| - | 6 kDa | - |