1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 0000-0002-3935-4637 Zhou, T. Tsybovsky, T. 0000-0003-3560-232X Kwong, P.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 90.00 90.00 90.00 1.00 1.00 1.00 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 S C N 163 N C N 164 N C N 165 N C N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 N C N 185 N C N 186 N C N 187 N C N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N N N 203 S C N 204 N C N 205 N O N 206 N C N 207 N C N 208 N C N 209 N C N 210 N N N 211 N O N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C N 232 N C N 233 N S N 234 N C N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 R C N 248 R C N 249 R C N 250 S C N 251 R C N 252 N C N 253 N C N 254 N C N 255 N N N 256 N O N 257 N O N 258 N O N 259 N O N 260 N O N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 S C N 279 N C N 280 N O N 281 N C Y 282 N C Y 283 N C Y 284 N C Y 285 N C Y 286 N C Y 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C N 305 N C N 306 N C N 307 N O N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N N N 318 S C N 319 N C N 320 N O N 321 N C N 322 N O N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 R C N 336 N O N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N N Y 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C Y 385 N C N 386 N O N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C N 404 N C N 405 N C N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing Y 276 N doub Y 277 N sing Y 278 N sing N 279 N sing Y 280 N doub N 281 N sing Y 282 N doub N 283 N sing Y 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N sing Y 354 N doub N 355 N sing Y 356 N doub N 357 N sing Y 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing Y 373 N doub Y 374 N sing Y 375 N sing N 376 N sing Y 377 N doub N 378 N sing Y 379 N doub N 380 N sing Y 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing US Science SCIEAS 0038 1095-9203 376 eabn8897 eabn8897 10.1126/science.abn8897 35324257 Structural basis for potent antibody neutralization of SARS-CoV-2 variants including B.1.1.529. 2022 0000-0002-3935-4637 0000-0002-8404-4910 0000-0001-7169-2639 0000-0003-3564-6453 0000-0002-8228-2560 0000-0003-0805-1331 0000-0002-0313-8502 0000-0003-3161-1624 0000-0002-9799-7817 0000-0003-0243-5203 0000-0002-4770-6444 0000-0002-3087-8397 0000-0002-8582-7597 0000-0002-0165-1513 0000-0001-8112-0853 0000-0002-5293-4695 0000-0002-2159-2039 0000-0003-3560-232X 10.2210/pdb7tbf/pdb pdb_00007tbf RIGID BODY FIT REAL 7MM0 1 7MM0 PDB experimental model Local refinement with cryoSparc 7TBF 358526 3.1 FSC 0.5 CUT-OFF POINT REL 2021-12-21 RCSB 2024-10-09 2022-03-30 Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1 100 mM HEPES, 150 mM NaCl 7.4 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 1, 2, 3, 4, 5 SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1 0 RECOMBINANT COMPLEX NO MEGADALTONS 0.570 2697049 Severe acute respiratory syndrome coronavirus 2 9606 Homo sapiens PARTICLE 1 1 SINGLE PARTICLE 40 OTHER 300 100 NITROGEN FIELD EMISSION GUN FLOOD BEAM FEI TITAN KRIOS BRIGHT FIELD 2.7 2100 1100 105000 FEI TITAN KRIOS AUTOGRID HOLDER 1 CRYSTALLOGRAPHY MERGING 1 1 1 IMAGE ACQUISITION 1 MASKING CTF CORRECTION 1 cryoSPARC 2.15 LAYERLINE INDEXING DIFFRACTION INDEXING MODEL FITTING 1 Coot 0.93 OTHER MODEL REFINEMENT 1 PHENIX 1.19 INITIAL EULER ASSIGNMENT 1 FINAL EULER ASSIGNMENT 1 CLASSIFICATION 1 RECONSTRUCTION 1 cryoSPARC 2.15 0.5 Complex at 0.5 mg/mL concentration in the buffer NO NO NO YES 277 ETHANE Blot for 2-3.5 seconds before plugging. 7TBF 95 FEI VITROBOT MARK IV 21986.652 Spike glycoprotein 1 man polymer 24285.312 Heavy chain of SARS-CoV-2 antibody B1-182.1 1 man polymer 23536.008 Light chain of SARS-CoV-2 antibody B1-182.1 1 man polymer 13934.431 Heavy chain of SARS-CoV-2 antibody A19-61.1 1 man polymer 11571.899 Light chain of SARS-CoV-2 antibody A19-61.1 1 man polymer 424.401 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched Spike protein S1 no no ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIA PGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFP LQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIA PGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFP LQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP A polypeptide(L) no no QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAY MELSSLRSEDTAVYYCAAPYCSGGSCFDGFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAY MELSSLRSEDTAVYYCAAPYCSGGSCFDGFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK H polypeptide(L) no no EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGFPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQYGNSPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGFPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQYGNSPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC L polypeptide(L) no no QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAFHWVRQAPGKGLEWVAVISYDGSNQYYADSVKGRFTISRDNSKNTLY LQMNSLRADDTAVYYCARDLAIAVAGTWHYYNGMDVWGQGTTVTVSS QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAFHWVRQAPGKGLEWVAVISYDGSNQYYADSVKGRFTISRDNSKNTLY LQMNSLRADDTAVYYCARDLAIAVAGTWHYYNGMDVWGQGTTVTVSS D polypeptide(L) no no DIQMTQSPSSVSASVGDRVIITCRASQGISSWLAWYQQKPGKAPKVLIYDASSLQSGVPSRFSGSGYGTDFTLTISSLQP EDSATYYCQQAKSFPITFGQGTRLEIK DIQMTQSPSSVSASVGDRVIITCRASQGISSWLAWYQQKPGKAPKVLIYDASSLQSGVPSRFSGSGYGTDFTLTISSLQP EDSATYYCQQAKSFPITFGQGTRLEIK E polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 196 S, 2 2697049 Severe acute respiratory syndrome coronavirus 2 HEK 293F 9606 Homo sapiens Biological sequence sample 1 228 9606 Homo sapiens 9606 Homo sapiens Biological sequence sample 1 215 9606 Homo sapiens 9606 Homo sapiens Biological sequence sample 1 127 9606 Homo sapiens HEK293F 9606 Homo sapiens Biological sequence sample 1 107 9606 Homo sapiens 9606 Homo sapiens Biological sequence citation citation_author chem_comp_atom chem_comp_bond em_3d_fitting_list em_admin pdbx_entry_details pdbx_initial_refinement_model pdbx_modification_feature repository Initial release Database references Data collection Refinement description Structure summary 1 0 2022-03-30 1 1 2022-10-19 1 2 2024-10-09 _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_admin.last_update _pdbx_entry_details.has_protein_modification United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) Intramural A NAG 2555 n B NAG 1 A NAG 2556 n B NAG 2 DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc pdkwong@nih.gov 0000-0003-3560-232X Peter Kwong D. principal investigator/group leader The complex containing this locally refined region Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1 N RCSB Y RCSB 2021-12-21 REL oligosaccharide DGlcpNAcb1-4DGlcpNAcb1- 6 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1 6 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}} 6 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 6 O1 HO4 sing n n N Y 7MM0 PDB experimental model B NAG 1 Carbohydrate C1 F NAG A ASN 343 ASN ND2 A ASN 12 1_555 NAG 1 1_555 N-Glycosylation A CYS 336 Disulfide bridge SG A CYS 5 A CYS 361 SG A CYS 30 1_555 1_555 None A CYS 391 Disulfide bridge SG A CYS 60 A CYS 525 SG A CYS 194 1_555 1_555 None A CYS 480 Disulfide bridge SG A CYS 149 A CYS 488 SG A CYS 157 1_555 1_555 None H CYS 22 Disulfide bridge SG B CYS 22 H CYS 92 SG B CYS 96 1_555 1_555 None H CYS 97 Disulfide bridge SG B CYS 101 B H CYS 100 SG B CYS 106 1_555 1_555 None H CYS 140 Disulfide bridge SG B CYS 150 H CYS 196 SG B CYS 206 1_555 1_555 None L CYS 23 Disulfide bridge SG C CYS 23 L CYS 88 SG C CYS 89 1_555 1_555 None L CYS 134 Disulfide bridge SG C CYS 135 L CYS 194 SG C CYS 195 1_555 1_555 None D CYS 22 Disulfide bridge SG D CYS 22 D CYS 96 SG D CYS 96 1_555 1_555 None E CYS 23 Disulfide bridge SG E CYS 23 E CYS 88 SG E CYS 88 1_555 1_555 None ILE 332 n 1 ILE 332 A THR 333 n 2 THR 333 A ASN 334 n 3 ASN 334 A LEU 335 n 4 LEU 335 A CYS 336 n 5 CYS 336 A PRO 337 n 6 PRO 337 A PHE 338 n 7 PHE 338 A GLY 339 n 8 GLY 339 A GLU 340 n 9 GLU 340 A VAL 341 n 10 VAL 341 A PHE 342 n 11 PHE 342 A ASN 343 n 12 ASN 343 A ALA 344 n 13 ALA 344 A THR 345 n 14 THR 345 A ARG 346 n 15 ARG 346 A PHE 347 n 16 PHE 347 A ALA 348 n 17 ALA 348 A SER 349 n 18 SER 349 A VAL 350 n 19 VAL 350 A TYR 351 n 20 TYR 351 A ALA 352 n 21 ALA 352 A TRP 353 n 22 TRP 353 A ASN 354 n 23 ASN 354 A ARG 355 n 24 ARG 355 A LYS 356 n 25 LYS 356 A ARG 357 n 26 ARG 357 A ILE 358 n 27 ILE 358 A SER 359 n 28 SER 359 A ASN 360 n 29 ASN 360 A CYS 361 n 30 CYS 361 A VAL 362 n 31 VAL 362 A ALA 363 n 32 ALA 363 A ASP 364 n 33 ASP 364 A TYR 365 n 34 TYR 365 A SER 366 n 35 SER 366 A VAL 367 n 36 VAL 367 A LEU 368 n 37 LEU 368 A TYR 369 n 38 TYR 369 A ASN 370 n 39 ASN 370 A SER 371 n 40 SER 371 A ALA 372 n 41 ALA 372 A SER 373 n 42 SER 373 A PHE 374 n 43 PHE 374 A SER 375 n 44 SER 375 A THR 376 n 45 THR 376 A PHE 377 n 46 PHE 377 A LYS 378 n 47 LYS 378 A CYS 379 n 48 CYS 379 A TYR 380 n 49 TYR 380 A GLY 381 n 50 GLY 381 A VAL 382 n 51 VAL 382 A SER 383 n 52 SER 383 A PRO 384 n 53 PRO 384 A THR 385 n 54 THR 385 A LYS 386 n 55 LYS 386 A LEU 387 n 56 LEU 387 A ASN 388 n 57 ASN 388 A ASP 389 n 58 ASP 389 A LEU 390 n 59 LEU 390 A CYS 391 n 60 CYS 391 A PHE 392 n 61 PHE 392 A THR 393 n 62 THR 393 A ASN 394 n 63 ASN 394 A VAL 395 n 64 VAL 395 A TYR 396 n 65 TYR 396 A ALA 397 n 66 ALA 397 A ASP 398 n 67 ASP 398 A SER 399 n 68 SER 399 A PHE 400 n 69 PHE 400 A VAL 401 n 70 VAL 401 A ILE 402 n 71 ILE 402 A ARG 403 n 72 ARG 403 A GLY 404 n 73 GLY 404 A ASP 405 n 74 ASP 405 A GLU 406 n 75 GLU 406 A VAL 407 n 76 VAL 407 A ARG 408 n 77 ARG 408 A GLN 409 n 78 GLN 409 A ILE 410 n 79 ILE 410 A ALA 411 n 80 ALA 411 A PRO 412 n 81 PRO 412 A GLY 413 n 82 GLY 413 A GLN 414 n 83 GLN 414 A THR 415 n 84 THR 415 A GLY 416 n 85 GLY 416 A LYS 417 n 86 LYS 417 A ILE 418 n 87 ILE 418 A ALA 419 n 88 ALA 419 A ASP 420 n 89 ASP 420 A TYR 421 n 90 TYR 421 A ASN 422 n 91 ASN 422 A TYR 423 n 92 TYR 423 A LYS 424 n 93 LYS 424 A LEU 425 n 94 LEU 425 A PRO 426 n 95 PRO 426 A ASP 427 n 96 ASP 427 A ASP 428 n 97 ASP 428 A PHE 429 n 98 PHE 429 A THR 430 n 99 THR 430 A GLY 431 n 100 GLY 431 A CYS 432 n 101 CYS 432 A VAL 433 n 102 VAL 433 A ILE 434 n 103 ILE 434 A ALA 435 n 104 ALA 435 A TRP 436 n 105 TRP 436 A ASN 437 n 106 ASN 437 A SER 438 n 107 SER 438 A ASN 439 n 108 ASN 439 A ASN 440 n 109 ASN 440 A LEU 441 n 110 LEU 441 A ASP 442 n 111 ASP 442 A SER 443 n 112 SER 443 A LYS 444 n 113 LYS 444 A VAL 445 n 114 VAL 445 A GLY 446 n 115 GLY 446 A GLY 447 n 116 GLY 447 A ASN 448 n 117 ASN 448 A TYR 449 n 118 TYR 449 A ASN 450 n 119 ASN 450 A TYR 451 n 120 TYR 451 A LEU 452 n 121 LEU 452 A TYR 453 n 122 TYR 453 A ARG 454 n 123 ARG 454 A LEU 455 n 124 LEU 455 A PHE 456 n 125 PHE 456 A ARG 457 n 126 ARG 457 A LYS 458 n 127 LYS 458 A SER 459 n 128 SER 459 A ASN 460 n 129 ASN 460 A LEU 461 n 130 LEU 461 A LYS 462 n 131 LYS 462 A PRO 463 n 132 PRO 463 A PHE 464 n 133 PHE 464 A GLU 465 n 134 GLU 465 A ARG 466 n 135 ARG 466 A ASP 467 n 136 ASP 467 A ILE 468 n 137 ILE 468 A SER 469 n 138 SER 469 A THR 470 n 139 THR 470 A GLU 471 n 140 GLU 471 A ILE 472 n 141 ILE 472 A TYR 473 n 142 TYR 473 A GLN 474 n 143 GLN 474 A ALA 475 n 144 ALA 475 A GLY 476 n 145 GLY 476 A SER 477 n 146 SER 477 A THR 478 n 147 THR 478 A PRO 479 n 148 PRO 479 A CYS 480 n 149 CYS 480 A ASN 481 n 150 ASN 481 A GLY 482 n 151 GLY 482 A VAL 483 n 152 VAL 483 A GLU 484 n 153 GLU 484 A GLY 485 n 154 GLY 485 A PHE 486 n 155 PHE 486 A ASN 487 n 156 ASN 487 A CYS 488 n 157 CYS 488 A TYR 489 n 158 TYR 489 A PHE 490 n 159 PHE 490 A PRO 491 n 160 PRO 491 A LEU 492 n 161 LEU 492 A GLN 493 n 162 GLN 493 A SER 494 n 163 SER 494 A TYR 495 n 164 TYR 495 A GLY 496 n 165 GLY 496 A PHE 497 n 166 PHE 497 A GLN 498 n 167 GLN 498 A PRO 499 n 168 PRO 499 A THR 500 n 169 THR 500 A ASN 501 n 170 ASN 501 A GLY 502 n 171 GLY 502 A VAL 503 n 172 VAL 503 A GLY 504 n 173 GLY 504 A TYR 505 n 174 TYR 505 A GLN 506 n 175 GLN 506 A PRO 507 n 176 PRO 507 A TYR 508 n 177 TYR 508 A ARG 509 n 178 ARG 509 A VAL 510 n 179 VAL 510 A VAL 511 n 180 VAL 511 A VAL 512 n 181 VAL 512 A LEU 513 n 182 LEU 513 A SER 514 n 183 SER 514 A PHE 515 n 184 PHE 515 A GLU 516 n 185 GLU 516 A LEU 517 n 186 LEU 517 A LEU 518 n 187 LEU 518 A HIS 519 n 188 HIS 519 A ALA 520 n 189 ALA 520 A PRO 521 n 190 PRO 521 A ALA 522 n 191 ALA 522 A THR 523 n 192 THR 523 A VAL 524 n 193 VAL 524 A CYS 525 n 194 CYS 525 A GLY 526 n 195 GLY 526 A PRO 527 n 196 PRO 527 A n 1 1 H MET 2 n 2 MET 2 H GLN 3 n 3 GLN 3 H LEU 4 n 4 LEU 4 H VAL 5 n 5 VAL 5 H GLN 6 n 6 GLN 6 H SER 7 n 7 SER 7 H GLY 8 n 8 GLY 8 H PRO 9 n 9 PRO 9 H GLU 10 n 10 GLU 10 H VAL 11 n 11 VAL 11 H LYS 12 n 12 LYS 12 H LYS 13 n 13 LYS 13 H PRO 14 n 14 PRO 14 H GLY 15 n 15 GLY 15 H THR 16 n 16 THR 16 H SER 17 n 17 SER 17 H VAL 18 n 18 VAL 18 H LYS 19 n 19 LYS 19 H VAL 20 n 20 VAL 20 H SER 21 n 21 SER 21 H CYS 22 n 22 CYS 22 H LYS 23 n 23 LYS 23 H ALA 24 n 24 ALA 24 H SER 25 n 25 SER 25 H GLY 26 n 26 GLY 26 H PHE 27 n 27 PHE 27 H THR 28 n 28 THR 28 H PHE 29 n 29 PHE 29 H THR 30 n 30 THR 30 H SER 31 n 31 SER 31 H SER 32 n 32 SER 32 H ALA 33 n 33 ALA 33 H VAL 34 n 34 VAL 34 H GLN 35 n 35 GLN 35 H TRP 36 n 36 TRP 36 H VAL 37 n 37 VAL 37 H ARG 38 n 38 ARG 38 H GLN 39 n 39 GLN 39 H ALA 40 n 40 ALA 40 H ARG 41 n 41 ARG 41 H GLY 42 n 42 GLY 42 H GLN 43 n 43 GLN 43 H ARG 44 n 44 ARG 44 H LEU 45 n 45 LEU 45 H GLU 46 n 46 GLU 46 H TRP 47 n 47 TRP 47 H ILE 48 n 48 ILE 48 H GLY 49 n 49 GLY 49 H TRP 50 n 50 TRP 50 H ILE 51 n 51 ILE 51 H VAL 52 n 52 VAL 52 H VAL 52 n 53 A VAL 52 H GLY 53 n 54 GLY 53 H SER 54 n 55 SER 54 H GLY 55 n 56 GLY 55 H ASN 56 n 57 ASN 56 H THR 57 n 58 THR 57 H ASN 58 n 59 ASN 58 H TYR 59 n 60 TYR 59 H ALA 60 n 61 ALA 60 H GLN 61 n 62 GLN 61 H LYS 62 n 63 LYS 62 H PHE 63 n 64 PHE 63 H GLN 64 n 65 GLN 64 H GLU 65 n 66 GLU 65 H ARG 66 n 67 ARG 66 H VAL 67 n 68 VAL 67 H THR 68 n 69 THR 68 H ILE 69 n 70 ILE 69 H THR 70 n 71 THR 70 H ARG 71 n 72 ARG 71 H ASP 72 n 73 ASP 72 H MET 73 n 74 MET 73 H SER 74 n 75 SER 74 H THR 75 n 76 THR 75 H SER 76 n 77 SER 76 H THR 77 n 78 THR 77 H ALA 78 n 79 ALA 78 H TYR 79 n 80 TYR 79 H MET 80 n 81 MET 80 H GLU 81 n 82 GLU 81 H LEU 82 n 83 LEU 82 H SER 82 n 84 A SER 82 H SER 82 n 85 B SER 82 H LEU 82 n 86 C LEU 82 H ARG 83 n 87 ARG 83 H SER 84 n 88 SER 84 H GLU 85 n 89 GLU 85 H ASP 86 n 90 ASP 86 H THR 87 n 91 THR 87 H ALA 88 n 92 ALA 88 H VAL 89 n 93 VAL 89 H TYR 90 n 94 TYR 90 H TYR 91 n 95 TYR 91 H CYS 92 n 96 CYS 92 H ALA 93 n 97 ALA 93 H ALA 94 n 98 ALA 94 H PRO 95 n 99 PRO 95 H TYR 96 n 100 TYR 96 H CYS 97 n 101 CYS 97 H SER 98 n 102 SER 98 H GLY 99 n 103 GLY 99 H GLY 100 n 104 GLY 100 H SER 100 n 105 A SER 100 H CYS 100 n 106 B CYS 100 H PHE 100 n 107 C PHE 100 H ASP 100 n 108 D ASP 100 H GLY 100 n 109 E GLY 100 H PHE 100 n 110 F PHE 100 H ASP 101 n 111 ASP 101 H ILE 102 n 112 ILE 102 H TRP 103 n 113 TRP 103 H GLY 104 n 114 GLY 104 H GLN 105 n 115 GLN 105 H GLY 106 n 116 GLY 106 H THR 107 n 117 THR 107 H MET 108 n 118 MET 108 H VAL 109 n 119 VAL 109 H THR 110 n 120 THR 110 H VAL 111 n 121 VAL 111 H SER 112 n 122 SER 112 H SER 113 n 123 SER 113 H ALA 114 n 124 ALA 114 H SER 115 n 125 SER 115 H THR 116 n 126 THR 116 H LYS 117 n 127 LYS 117 H GLY 118 n 128 GLY 118 H PRO 119 n 129 PRO 119 H SER 120 n 130 SER 120 H VAL 121 n 131 VAL 121 H PHE 122 n 132 PHE 122 H PRO 123 n 133 PRO 123 H LEU 124 n 134 LEU 124 H ALA 125 n 135 ALA 125 H PRO 126 n 136 PRO 126 H SER 127 n 137 SER 127 H n 138 128 H n 139 129 H n 140 130 H n 141 131 H n 142 132 H n 143 133 H n 144 134 H THR 135 n 145 THR 135 H ALA 136 n 146 ALA 136 H ALA 137 n 147 ALA 137 H LEU 138 n 148 LEU 138 H GLY 139 n 149 GLY 139 H CYS 140 n 150 CYS 140 H LEU 141 n 151 LEU 141 H VAL 142 n 152 VAL 142 H LYS 143 n 153 LYS 143 H ASP 144 n 154 ASP 144 H TYR 145 n 155 TYR 145 H PHE 146 n 156 PHE 146 H PRO 147 n 157 PRO 147 H GLU 148 n 158 GLU 148 H PRO 149 n 159 PRO 149 H VAL 150 n 160 VAL 150 H THR 151 n 161 THR 151 H VAL 152 n 162 VAL 152 H SER 153 n 163 SER 153 H TRP 154 n 164 TRP 154 H ASN 155 n 165 ASN 155 H SER 156 n 166 SER 156 H GLY 157 n 167 GLY 157 H ALA 158 n 168 ALA 158 H LEU 159 n 169 LEU 159 H THR 160 n 170 THR 160 H SER 161 n 171 SER 161 H GLY 162 n 172 GLY 162 H VAL 163 n 173 VAL 163 H HIS 164 n 174 HIS 164 H THR 165 n 175 THR 165 H PHE 166 n 176 PHE 166 H PRO 167 n 177 PRO 167 H ALA 168 n 178 ALA 168 H VAL 169 n 179 VAL 169 H LEU 170 n 180 LEU 170 H GLN 171 n 181 GLN 171 H SER 172 n 182 SER 172 H SER 173 n 183 SER 173 H GLY 174 n 184 GLY 174 H LEU 175 n 185 LEU 175 H TYR 176 n 186 TYR 176 H SER 177 n 187 SER 177 H LEU 178 n 188 LEU 178 H SER 179 n 189 SER 179 H SER 180 n 190 SER 180 H VAL 181 n 191 VAL 181 H VAL 182 n 192 VAL 182 H THR 183 n 193 THR 183 H VAL 184 n 194 VAL 184 H PRO 185 n 195 PRO 185 H SER 186 n 196 SER 186 H SER 187 n 197 SER 187 H SER 188 n 198 SER 188 H LEU 189 n 199 LEU 189 H GLY 190 n 200 GLY 190 H THR 191 n 201 THR 191 H GLN 192 n 202 GLN 192 H THR 193 n 203 THR 193 H TYR 194 n 204 TYR 194 H ILE 195 n 205 ILE 195 H CYS 196 n 206 CYS 196 H ASN 197 n 207 ASN 197 H VAL 198 n 208 VAL 198 H ASN 199 n 209 ASN 199 H HIS 200 n 210 HIS 200 H LYS 201 n 211 LYS 201 H PRO 202 n 212 PRO 202 H SER 203 n 213 SER 203 H ASN 204 n 214 ASN 204 H THR 205 n 215 THR 205 H LYS 206 n 216 LYS 206 H VAL 207 n 217 VAL 207 H ASP 208 n 218 ASP 208 H LYS 209 n 219 LYS 209 H LYS 210 n 220 LYS 210 H VAL 211 n 221 VAL 211 H GLU 212 n 222 GLU 212 H PRO 213 n 223 PRO 213 H n 224 214 H n 225 215 H n 226 216 H n 227 217 H n 228 218 H GLU 1 n 1 GLU 1 L ILE 2 n 2 ILE 2 L VAL 3 n 3 VAL 3 L LEU 4 n 4 LEU 4 L THR 5 n 5 THR 5 L GLN 6 n 6 GLN 6 L SER 7 n 7 SER 7 L PRO 8 n 8 PRO 8 L GLY 9 n 9 GLY 9 L THR 10 n 10 THR 10 L LEU 11 n 11 LEU 11 L SER 12 n 12 SER 12 L LEU 13 n 13 LEU 13 L SER 14 n 14 SER 14 L PRO 15 n 15 PRO 15 L GLY 16 n 16 GLY 16 L GLU 17 n 17 GLU 17 L ARG 18 n 18 ARG 18 L ALA 19 n 19 ALA 19 L THR 20 n 20 THR 20 L LEU 21 n 21 LEU 21 L SER 22 n 22 SER 22 L CYS 23 n 23 CYS 23 L ARG 24 n 24 ARG 24 L ALA 25 n 25 ALA 25 L SER 26 n 26 SER 26 L GLN 27 n 27 GLN 27 L SER 27 n 28 A SER 27 L VAL 28 n 29 VAL 28 L SER 29 n 30 SER 29 L SER 30 n 31 SER 30 L SER 31 n 32 SER 31 L TYR 32 n 33 TYR 32 L LEU 33 n 34 LEU 33 L ALA 34 n 35 ALA 34 L TRP 35 n 36 TRP 35 L TYR 36 n 37 TYR 36 L GLN 37 n 38 GLN 37 L GLN 38 n 39 GLN 38 L LYS 39 n 40 LYS 39 L PRO 40 n 41 PRO 40 L GLY 41 n 42 GLY 41 L GLN 42 n 43 GLN 42 L ALA 43 n 44 ALA 43 L PRO 44 n 45 PRO 44 L ARG 45 n 46 ARG 45 L LEU 46 n 47 LEU 46 L LEU 47 n 48 LEU 47 L ILE 48 n 49 ILE 48 L TYR 49 n 50 TYR 49 L GLY 50 n 51 GLY 50 L ALA 51 n 52 ALA 51 L SER 52 n 53 SER 52 L SER 53 n 54 SER 53 L ARG 54 n 55 ARG 54 L ALA 55 n 56 ALA 55 L THR 56 n 57 THR 56 L GLY 57 n 58 GLY 57 L PHE 58 n 59 PHE 58 L PRO 59 n 60 PRO 59 L ASP 60 n 61 ASP 60 L ARG 61 n 62 ARG 61 L PHE 62 n 63 PHE 62 L SER 63 n 64 SER 63 L GLY 64 n 65 GLY 64 L SER 65 n 66 SER 65 L GLY 66 n 67 GLY 66 L SER 67 n 68 SER 67 L GLY 68 n 69 GLY 68 L THR 69 n 70 THR 69 L ASP 70 n 71 ASP 70 L PHE 71 n 72 PHE 71 L THR 72 n 73 THR 72 L LEU 73 n 74 LEU 73 L THR 74 n 75 THR 74 L ILE 75 n 76 ILE 75 L SER 76 n 77 SER 76 L ARG 77 n 78 ARG 77 L LEU 78 n 79 LEU 78 L GLU 79 n 80 GLU 79 L PRO 80 n 81 PRO 80 L GLU 81 n 82 GLU 81 L ASP 82 n 83 ASP 82 L PHE 83 n 84 PHE 83 L ALA 84 n 85 ALA 84 L VAL 85 n 86 VAL 85 L TYR 86 n 87 TYR 86 L TYR 87 n 88 TYR 87 L CYS 88 n 89 CYS 88 L GLN 89 n 90 GLN 89 L GLN 90 n 91 GLN 90 L TYR 91 n 92 TYR 91 L GLY 92 n 93 GLY 92 L ASN 93 n 94 ASN 93 L SER 94 n 95 SER 94 L PRO 95 n 96 PRO 95 L TRP 96 n 97 TRP 96 L THR 97 n 98 THR 97 L PHE 98 n 99 PHE 98 L GLY 99 n 100 GLY 99 L GLN 100 n 101 GLN 100 L GLY 101 n 102 GLY 101 L THR 102 n 103 THR 102 L LYS 103 n 104 LYS 103 L VAL 104 n 105 VAL 104 L GLU 105 n 106 GLU 105 L ILE 106 n 107 ILE 106 L ARG 107 n 108 ARG 107 L ARG 108 n 109 ARG 108 L THR 109 n 110 THR 109 L VAL 110 n 111 VAL 110 L ALA 111 n 112 ALA 111 L ALA 112 n 113 ALA 112 L PRO 113 n 114 PRO 113 L SER 114 n 115 SER 114 L VAL 115 n 116 VAL 115 L PHE 116 n 117 PHE 116 L ILE 117 n 118 ILE 117 L PHE 118 n 119 PHE 118 L PRO 119 n 120 PRO 119 L PRO 120 n 121 PRO 120 L SER 121 n 122 SER 121 L ASP 122 n 123 ASP 122 L GLU 123 n 124 GLU 123 L GLN 124 n 125 GLN 124 L LEU 125 n 126 LEU 125 L LYS 126 n 127 LYS 126 L SER 127 n 128 SER 127 L GLY 128 n 129 GLY 128 L THR 129 n 130 THR 129 L ALA 130 n 131 ALA 130 L SER 131 n 132 SER 131 L VAL 132 n 133 VAL 132 L VAL 133 n 134 VAL 133 L CYS 134 n 135 CYS 134 L LEU 135 n 136 LEU 135 L LEU 136 n 137 LEU 136 L ASN 137 n 138 ASN 137 L ASN 138 n 139 ASN 138 L PHE 139 n 140 PHE 139 L TYR 140 n 141 TYR 140 L PRO 141 n 142 PRO 141 L ARG 142 n 143 ARG 142 L GLU 143 n 144 GLU 143 L ALA 144 n 145 ALA 144 L LYS 145 n 146 LYS 145 L VAL 146 n 147 VAL 146 L GLN 147 n 148 GLN 147 L TRP 148 n 149 TRP 148 L LYS 149 n 150 LYS 149 L VAL 150 n 151 VAL 150 L ASP 151 n 152 ASP 151 L ASN 152 n 153 ASN 152 L ALA 153 n 154 ALA 153 L LEU 154 n 155 LEU 154 L GLN 155 n 156 GLN 155 L SER 156 n 157 SER 156 L GLY 157 n 158 GLY 157 L ASN 158 n 159 ASN 158 L SER 159 n 160 SER 159 L GLN 160 n 161 GLN 160 L GLU 161 n 162 GLU 161 L SER 162 n 163 SER 162 L VAL 163 n 164 VAL 163 L THR 164 n 165 THR 164 L GLU 165 n 166 GLU 165 L GLN 166 n 167 GLN 166 L ASP 167 n 168 ASP 167 L SER 168 n 169 SER 168 L LYS 169 n 170 LYS 169 L ASP 170 n 171 ASP 170 L SER 171 n 172 SER 171 L THR 172 n 173 THR 172 L TYR 173 n 174 TYR 173 L SER 174 n 175 SER 174 L LEU 175 n 176 LEU 175 L SER 176 n 177 SER 176 L SER 177 n 178 SER 177 L THR 178 n 179 THR 178 L LEU 179 n 180 LEU 179 L THR 180 n 181 THR 180 L LEU 181 n 182 LEU 181 L SER 182 n 183 SER 182 L LYS 183 n 184 LYS 183 L ALA 184 n 185 ALA 184 L ASP 185 n 186 ASP 185 L TYR 186 n 187 TYR 186 L GLU 187 n 188 GLU 187 L LYS 188 n 189 LYS 188 L HIS 189 n 190 HIS 189 L LYS 190 n 191 LYS 190 L VAL 191 n 192 VAL 191 L TYR 192 n 193 TYR 192 L ALA 193 n 194 ALA 193 L CYS 194 n 195 CYS 194 L GLU 195 n 196 GLU 195 L VAL 196 n 197 VAL 196 L THR 197 n 198 THR 197 L HIS 198 n 199 HIS 198 L GLN 199 n 200 GLN 199 L GLY 200 n 201 GLY 200 L LEU 201 n 202 LEU 201 L SER 202 n 203 SER 202 L SER 203 n 204 SER 203 L PRO 204 n 205 PRO 204 L VAL 205 n 206 VAL 205 L THR 206 n 207 THR 206 L LYS 207 n 208 LYS 207 L SER 208 n 209 SER 208 L PHE 209 n 210 PHE 209 L ASN 210 n 211 ASN 210 L ARG 211 n 212 ARG 211 L GLY 212 n 213 GLY 212 L n 214 213 L n 215 214 L n 1 1 D VAL 2 n 2 VAL 2 D GLN 3 n 3 GLN 3 D LEU 4 n 4 LEU 4 D VAL 5 n 5 VAL 5 D GLU 6 n 6 GLU 6 D SER 7 n 7 SER 7 D GLY 8 n 8 GLY 8 D GLY 9 n 9 GLY 9 D GLY 10 n 10 GLY 10 D VAL 11 n 11 VAL 11 D VAL 12 n 12 VAL 12 D GLN 13 n 13 GLN 13 D PRO 14 n 14 PRO 14 D GLY 15 n 15 GLY 15 D ARG 16 n 16 ARG 16 D SER 17 n 17 SER 17 D LEU 18 n 18 LEU 18 D ARG 19 n 19 ARG 19 D LEU 20 n 20 LEU 20 D SER 21 n 21 SER 21 D CYS 22 n 22 CYS 22 D ALA 23 n 23 ALA 23 D ALA 24 n 24 ALA 24 D SER 25 n 25 SER 25 D GLY 26 n 26 GLY 26 D PHE 27 n 27 PHE 27 D THR 28 n 28 THR 28 D PHE 29 n 29 PHE 29 D SER 30 n 30 SER 30 D SER 31 n 31 SER 31 D TYR 32 n 32 TYR 32 D ALA 33 n 33 ALA 33 D PHE 34 n 34 PHE 34 D HIS 35 n 35 HIS 35 D TRP 36 n 36 TRP 36 D VAL 37 n 37 VAL 37 D ARG 38 n 38 ARG 38 D GLN 39 n 39 GLN 39 D ALA 40 n 40 ALA 40 D PRO 41 n 41 PRO 41 D GLY 42 n 42 GLY 42 D LYS 43 n 43 LYS 43 D GLY 44 n 44 GLY 44 D LEU 45 n 45 LEU 45 D GLU 46 n 46 GLU 46 D TRP 47 n 47 TRP 47 D VAL 48 n 48 VAL 48 D ALA 49 n 49 ALA 49 D VAL 50 n 50 VAL 50 D ILE 51 n 51 ILE 51 D SER 52 n 52 SER 52 D TYR 53 n 53 TYR 53 D ASP 54 n 54 ASP 54 D GLY 55 n 55 GLY 55 D SER 56 n 56 SER 56 D ASN 57 n 57 ASN 57 D GLN 58 n 58 GLN 58 D TYR 59 n 59 TYR 59 D TYR 60 n 60 TYR 60 D ALA 61 n 61 ALA 61 D ASP 62 n 62 ASP 62 D SER 63 n 63 SER 63 D VAL 64 n 64 VAL 64 D LYS 65 n 65 LYS 65 D GLY 66 n 66 GLY 66 D ARG 67 n 67 ARG 67 D PHE 68 n 68 PHE 68 D THR 69 n 69 THR 69 D ILE 70 n 70 ILE 70 D SER 71 n 71 SER 71 D ARG 72 n 72 ARG 72 D ASP 73 n 73 ASP 73 D ASN 74 n 74 ASN 74 D SER 75 n 75 SER 75 D LYS 76 n 76 LYS 76 D ASN 77 n 77 ASN 77 D THR 78 n 78 THR 78 D LEU 79 n 79 LEU 79 D TYR 80 n 80 TYR 80 D LEU 81 n 81 LEU 81 D GLN 82 n 82 GLN 82 D MET 83 n 83 MET 83 D ASN 84 n 84 ASN 84 D SER 85 n 85 SER 85 D LEU 86 n 86 LEU 86 D ARG 87 n 87 ARG 87 D ALA 88 n 88 ALA 88 D ASP 89 n 89 ASP 89 D ASP 90 n 90 ASP 90 D THR 91 n 91 THR 91 D ALA 92 n 92 ALA 92 D VAL 93 n 93 VAL 93 D TYR 94 n 94 TYR 94 D TYR 95 n 95 TYR 95 D CYS 96 n 96 CYS 96 D ALA 97 n 97 ALA 97 D ARG 98 n 98 ARG 98 D ASP 99 n 99 ASP 99 D LEU 100 n 100 LEU 100 D ALA 101 n 101 ALA 101 D ILE 102 n 102 ILE 102 D ALA 103 n 103 ALA 103 D VAL 104 n 104 VAL 104 D ALA 105 n 105 ALA 105 D GLY 106 n 106 GLY 106 D THR 107 n 107 THR 107 D TRP 108 n 108 TRP 108 D HIS 109 n 109 HIS 109 D TYR 110 n 110 TYR 110 D TYR 111 n 111 TYR 111 D ASN 112 n 112 ASN 112 D GLY 113 n 113 GLY 113 D MET 114 n 114 MET 114 D ASP 115 n 115 ASP 115 D VAL 116 n 116 VAL 116 D TRP 117 n 117 TRP 117 D GLY 118 n 118 GLY 118 D GLN 119 n 119 GLN 119 D GLY 120 n 120 GLY 120 D THR 121 n 121 THR 121 D THR 122 n 122 THR 122 D VAL 123 n 123 VAL 123 D THR 124 n 124 THR 124 D VAL 125 n 125 VAL 125 D SER 126 n 126 SER 126 D SER 127 n 127 SER 127 D ASP 1 n 1 ASP 1 E ILE 2 n 2 ILE 2 E GLN 3 n 3 GLN 3 E MET 4 n 4 MET 4 E THR 5 n 5 THR 5 E GLN 6 n 6 GLN 6 E SER 7 n 7 SER 7 E PRO 8 n 8 PRO 8 E SER 9 n 9 SER 9 E SER 10 n 10 SER 10 E VAL 11 n 11 VAL 11 E SER 12 n 12 SER 12 E ALA 13 n 13 ALA 13 E SER 14 n 14 SER 14 E VAL 15 n 15 VAL 15 E GLY 16 n 16 GLY 16 E ASP 17 n 17 ASP 17 E ARG 18 n 18 ARG 18 E VAL 19 n 19 VAL 19 E ILE 20 n 20 ILE 20 E ILE 21 n 21 ILE 21 E THR 22 n 22 THR 22 E CYS 23 n 23 CYS 23 E ARG 24 n 24 ARG 24 E ALA 25 n 25 ALA 25 E SER 26 n 26 SER 26 E GLN 27 n 27 GLN 27 E GLY 28 n 28 GLY 28 E ILE 29 n 29 ILE 29 E SER 30 n 30 SER 30 E SER 31 n 31 SER 31 E TRP 32 n 32 TRP 32 E LEU 33 n 33 LEU 33 E ALA 34 n 34 ALA 34 E TRP 35 n 35 TRP 35 E TYR 36 n 36 TYR 36 E GLN 37 n 37 GLN 37 E GLN 38 n 38 GLN 38 E LYS 39 n 39 LYS 39 E PRO 40 n 40 PRO 40 E GLY 41 n 41 GLY 41 E LYS 42 n 42 LYS 42 E ALA 43 n 43 ALA 43 E PRO 44 n 44 PRO 44 E LYS 45 n 45 LYS 45 E VAL 46 n 46 VAL 46 E LEU 47 n 47 LEU 47 E ILE 48 n 48 ILE 48 E TYR 49 n 49 TYR 49 E ASP 50 n 50 ASP 50 E ALA 51 n 51 ALA 51 E SER 52 n 52 SER 52 E SER 53 n 53 SER 53 E LEU 54 n 54 LEU 54 E GLN 55 n 55 GLN 55 E SER 56 n 56 SER 56 E GLY 57 n 57 GLY 57 E VAL 58 n 58 VAL 58 E PRO 59 n 59 PRO 59 E SER 60 n 60 SER 60 E ARG 61 n 61 ARG 61 E PHE 62 n 62 PHE 62 E SER 63 n 63 SER 63 E GLY 64 n 64 GLY 64 E SER 65 n 65 SER 65 E GLY 66 n 66 GLY 66 E TYR 67 n 67 TYR 67 E GLY 68 n 68 GLY 68 E THR 69 n 69 THR 69 E ASP 70 n 70 ASP 70 E PHE 71 n 71 PHE 71 E THR 72 n 72 THR 72 E LEU 73 n 73 LEU 73 E THR 74 n 74 THR 74 E ILE 75 n 75 ILE 75 E SER 76 n 76 SER 76 E SER 77 n 77 SER 77 E LEU 78 n 78 LEU 78 E GLN 79 n 79 GLN 79 E PRO 80 n 80 PRO 80 E GLU 81 n 81 GLU 81 E ASP 82 n 82 ASP 82 E SER 83 n 83 SER 83 E ALA 84 n 84 ALA 84 E THR 85 n 85 THR 85 E TYR 86 n 86 TYR 86 E TYR 87 n 87 TYR 87 E CYS 88 n 88 CYS 88 E GLN 89 n 89 GLN 89 E GLN 90 n 90 GLN 90 E ALA 91 n 91 ALA 91 E LYS 92 n 92 LYS 92 E SER 93 n 93 SER 93 E PHE 94 n 94 PHE 94 E PRO 95 n 95 PRO 95 E ILE 96 n 96 ILE 96 E THR 97 n 97 THR 97 E PHE 98 n 98 PHE 98 E GLY 99 n 99 GLY 99 E GLN 100 n 100 GLN 100 E GLY 101 n 101 GLY 101 E THR 102 n 102 THR 102 E ARG 103 n 103 ARG 103 E LEU 104 n 104 LEU 104 E GLU 105 n 105 GLU 105 E ILE 106 n 106 ILE 106 E LYS 107 n 107 LYS 107 E author_defined_assembly 5 pentameric microscopy 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 358 A N ILE 27 A O VAL 395 A O VAL 64 A N PHE 400 A N PHE 69 A O VAL 510 A O VAL 179 A O VAL 511 A O VAL 180 A N ILE 434 A N ILE 103 A O VAL 433 A O VAL 102 A N LYS 378 A N LYS 47 A N TYR 453 A N TYR 122 A O GLN 493 A O GLN 162 A N TYR 473 A N TYR 142 A O TYR 489 A O TYR 158 H N VAL 5 B N VAL 5 H O LYS 23 B O LYS 23 H N VAL 20 B N VAL 20 H O MET 80 B O MET 81 H O GLU 81 B O GLU 82 H N THR 68 B N THR 69 H N GLU 10 B N GLU 10 H O MET 108 B O MET 118 H O VAL 109 B O VAL 119 H N ALA 88 B N ALA 92 H O VAL 89 B O VAL 93 H N GLN 39 B N GLN 39 H N TRP 36 B N TRP 36 H O GLY 49 B O GLY 49 H N TRP 50 B N TRP 50 H O ASN 58 B O ASN 59 H N GLU 10 B N GLU 10 H O MET 108 B O MET 118 H O VAL 109 B O VAL 119 H N ALA 88 B N ALA 92 H N ALA 94 B N ALA 98 H O ILE 102 B O ILE 112 H N SER 98 B N SER 102 A H O SER 100 B O SER 105 H N SER 120 B N SER 130 H O LYS 143 B O LYS 153 H N LEU 138 B N LEU 148 H O VAL 182 B O VAL 192 H O VAL 181 B O VAL 191 H N HIS 164 B N HIS 174 H N THR 151 B N THR 161 H O ASN 199 B O ASN 209 H N VAL 198 B N VAL 208 H O VAL 207 B O VAL 217 L N LEU 11 C N LEU 11 L O GLU 105 C O GLU 106 L O THR 102 C O THR 103 L N TYR 86 C N TYR 87 L O VAL 85 C O VAL 86 L N GLN 38 C N GLN 39 L N GLN 37 C N GLN 38 L O ARG 45 C O ARG 46 L N LEU 11 C N LEU 11 L O GLU 105 C O GLU 106 L O THR 102 C O THR 103 L N TYR 86 C N TYR 87 L N GLN 90 C N GLN 91 L O THR 97 C O THR 98 L N LEU 21 C N LEU 21 L O LEU 73 C O LEU 74 L N PHE 116 C N PHE 117 L O LEU 135 C O LEU 136 L N LEU 136 C N LEU 137 L O LEU 175 C O LEU 176 L O THR 178 C O THR 179 L N GLN 160 C N GLN 161 D N CYS 22 D N CYS 22 D O LEU 79 D O LEU 79 D O TYR 80 D O TYR 80 D N SER 71 D N SER 71 D O TYR 59 D O TYR 59 D N VAL 50 D N VAL 50 D O GLU 46 D O GLU 46 D N ARG 38 D N ARG 38 D N VAL 37 D N VAL 37 D O TYR 95 D O TYR 95 D N ALA 92 D N ALA 92 D O VAL 123 D O VAL 123 D N VAL 104 D N VAL 104 D O THR 107 D O THR 107 E N THR 5 E N THR 5 E O ARG 24 E O ARG 24 E N CYS 23 E N CYS 23 E O PHE 71 E O PHE 71 E O THR 74 E O THR 74 E N SER 63 E N SER 63 E N TRP 35 E N TRP 35 E O LEU 47 E O LEU 47 E N TYR 86 E N TYR 86 E O THR 102 E O THR 102 1 H OG SER 113 B OG SER 123 1 Y 1 H GLN 1 B GLN 1 1 Y 1 H SER 128 B SER 138 1 Y 1 H LYS 129 B LYS 139 1 Y 1 H SER 130 B SER 140 1 Y 1 H THR 131 B THR 141 1 Y 1 H SER 132 B SER 142 1 Y 1 H GLY 133 B GLY 143 1 Y 1 H GLY 134 B GLY 144 1 Y 1 H LYS 214 B LYS 224 1 Y 1 H SER 215 B SER 225 1 Y 1 H CYS 216 B CYS 226 1 Y 1 H ASP 217 B ASP 227 1 Y 1 H LYS 218 B LYS 228 1 Y 1 L GLU 213 C GLU 214 1 Y 1 L CYS 214 C CYS 215 1 Y 1 D GLN 1 D GLN 1 1 Y 1 L L NE2 O GLN THR 124 129 2.06 1 -9.81 1.40 111.70 101.89 A A A CA N CD PRO PRO PRO 384 384 384 N 1 -20.68 1.90 104.80 84.12 A A A CA CB CG PRO PRO PRO 384 384 384 N 1 25.90 3.90 106.50 132.40 A A A CB CG CD PRO PRO PRO 384 384 384 N 1 -26.89 1.50 103.20 76.31 A A A N CD CG PRO PRO PRO 384 384 384 N 1 A A CG CD PRO PRO 384 384 -0.460 0.033 1.502 1.042 N 1 A ASN 343 -94.20 58.07 1 A ALA 348 67.04 171.96 1 A ASN 370 -92.92 52.43 1 A ALA 372 70.73 -160.22 1 A GLN 414 69.39 145.14 1 A PHE 456 61.00 69.39 1 A LEU 461 65.36 174.83 1 A HIS 519 37.63 50.15 1 H GLU 65 -92.44 45.66 1 H ARG 66 -142.43 -15.24 1 H THR 75 66.87 -4.15 1 H SER 112 -172.93 -179.50 1 H ALA 114 64.82 163.49 1 H THR 116 -172.76 140.24 1 H ALA 136 -170.88 -167.20 1 H LEU 138 -171.98 139.65 1 H CYS 140 -107.46 -169.22 1 H ASP 144 61.30 68.83 1 H GLU 148 115.70 -52.94 1 H ASN 155 51.60 -102.49 1 H LEU 159 70.66 -15.33 1 H THR 160 32.73 45.34 1 H SER 186 -61.55 1.55 1 H THR 191 -154.34 -157.73 1 H GLN 192 -39.64 137.41 1 H ASN 197 -170.55 134.23 1 H PRO 202 -78.34 44.41 1 H SER 203 -173.32 137.70 1 H GLU 212 111.59 171.15 1 L SER 31 59.66 11.42 1 L ALA 51 72.82 -10.10 1 L ARG 61 84.22 -1.87 1 L SER 67 -165.28 -166.69 1 L THR 69 -140.65 20.11 1 L GLN 89 -170.89 141.70 1 L ALA 111 -141.58 45.13 1 L PHE 118 -161.15 58.49 1 L LYS 126 -91.63 46.93 1 L SER 127 -176.14 -170.93 1 L ASN 138 61.85 67.10 1 L VAL 150 60.33 -101.25 1 L ASP 151 -106.30 -168.61 1 L SER 156 -82.51 48.41 1 L LEU 181 69.55 -114.75 1 L LYS 183 -115.03 -166.38 1 L ALA 184 -49.98 -14.09 1 L HIS 189 -118.83 52.95 1 L ALA 193 -160.79 100.46 1 L LEU 201 -59.78 1.41 1 L SER 202 72.15 -119.59 1 D PRO 41 -69.73 75.30 1 D LYS 43 -103.84 -169.24 1 E SER 10 -162.97 119.56 1 E VAL 15 53.58 -113.62 1 E SER 30 52.25 -143.98 1 E SER 31 -97.11 59.02 1 E ALA 51 68.76 -7.41 1 E PRO 80 -76.97 44.94 0.007 6779 0.845 9220 5.598 946 0.046 1018 0.006 1184 refinement PHENIX 1.19.2_4158: N Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N A PHE 338 A PHE 7 HELX_P A ASN 343 A ASN 12 1 AA1 6 A LYS 417 A LYS 86 HELX_P A ASN 422 A ASN 91 1 AA2 6 H PHE 63 B PHE 64 HELX_P H GLU 65 B GLU 66 5 AA3 3 H MET 73 B MET 74 HELX_P H THR 75 B THR 76 5 AA4 3 D THR 28 D THR 28 HELX_P D TYR 32 D TYR 32 5 AA5 5 disulf 2.035 A CYS 336 A SG CYS 5 1_555 A CYS 361 A SG CYS 30 1_555 disulf 2.047 A CYS 391 A SG CYS 60 1_555 A CYS 525 A SG CYS 194 1_555 disulf 2.028 A CYS 480 A SG CYS 149 1_555 A CYS 488 A SG CYS 157 1_555 disulf 2.034 H CYS 22 B SG CYS 22 1_555 H CYS 92 B SG CYS 96 1_555 disulf 2.030 B H CYS 97 B SG CYS 101 1_555 H CYS 100 B SG CYS 106 1_555 disulf 2.031 H CYS 140 B SG CYS 150 1_555 H CYS 196 B SG CYS 206 1_555 disulf 2.033 L CYS 23 C SG CYS 23 1_555 L CYS 88 C SG CYS 89 1_555 disulf 2.044 L CYS 134 C SG CYS 135 1_555 L CYS 194 C SG CYS 195 1_555 disulf 2.037 D CYS 22 D SG CYS 22 1_555 D CYS 96 D SG CYS 96 1_555 disulf 2.036 E CYS 23 E SG CYS 23 1_555 E CYS 88 E SG CYS 88 1_555 covale 1.438 one N-Glycosylation A ASN 343 A ND2 ASN 12 1_555 B NAG 1 F C1 NAG 1_555 covale 1.449 both B NAG 1 F O4 NAG 1_555 B NAG 2 F C1 NAG 1_555 VIRAL PROTEIN/Immune System SARS-CoV-2, spike, antibody, VIRAL PROTEIN, VIRAL PROTEIN-Immune System complex L SER 7 C SER 7 1 L PRO 8 C PRO 8 -0.83 L SER 94 C SER 95 1 L PRO 95 C PRO 96 -5.36 E SER 7 E SER 7 1 E PRO 8 E PRO 8 -0.85 E PHE 94 E PHE 94 1 E PRO 95 E PRO 95 0.09 SPIKE_SARS2 UNP 1 332 P0DTC2 ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIA PGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFP LQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP 7TBF PDB 2 1 7TBF 7TBF PDB 3 1 7TBF 7TBF PDB 4 1 7TBF 7TBF PDB 5 1 7TBF 332 527 7TBF 332 527 P0DTC2 A 1 1 196 1 218 7TBF 1 218 7TBF H 2 1 228 1 214 7TBF 1 214 7TBF L 3 1 215 1 127 7TBF 1 127 7TBF D 4 1 127 1 107 7TBF 1 107 7TBF E 5 1 107 5 2 2 4 6 4 2 2 3 3 5 4 2 4 3 5 2 4 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ASN 354 A ASN 23 A ILE 358 A ILE 27 A ASN 394 A ASN 63 A ILE 402 A ILE 71 A TYR 508 A TYR 177 A GLU 516 A GLU 185 A GLY 431 A GLY 100 A ASN 437 A ASN 106 A THR 376 A THR 45 A LYS 378 A LYS 47 A LEU 452 A LEU 121 A ARG 454 A ARG 123 A LEU 492 A LEU 161 A SER 494 A SER 163 A TYR 473 A TYR 142 A GLN 474 A GLN 143 A CYS 488 A CYS 157 A TYR 489 A TYR 158 H GLN 3 B GLN 3 H GLN 6 B GLN 6 H VAL 18 B VAL 18 H SER 25 B SER 25 H THR 77 B THR 78 H LEU 82 B LEU 83 H VAL 67 B VAL 68 H THR 68 B THR 69 H GLU 10 B GLU 10 H LYS 12 B LYS 12 H MET 108 B MET 118 H VAL 111 B VAL 121 H ALA 88 B ALA 92 H ALA 94 B ALA 98 H ALA 33 B ALA 33 H GLN 39 B GLN 39 H GLU 46 B GLU 46 H VAL 52 B VAL 52 H THR 57 B THR 58 H TYR 59 B TYR 60 H GLU 10 B GLU 10 H LYS 12 B LYS 12 H MET 108 B MET 118 H VAL 111 B VAL 121 H ALA 88 B ALA 92 H ALA 94 B ALA 98 H ILE 102 B ILE 112 H TRP 103 B TRP 113 H CYS 97 B CYS 101 H SER 98 B SER 102 H SER 100 B SER 105 H CYS 100 B CYS 106 A B H SER 120 B SER 130 H VAL 121 B VAL 131 H VAL 142 B VAL 152 H LYS 143 B LYS 153 H ALA 137 B ALA 147 H GLY 139 B GLY 149 H SER 180 B SER 190 H THR 183 B THR 193 H HIS 164 B HIS 174 H THR 165 B THR 175 H VAL 150 B VAL 160 H TRP 154 B TRP 164 H CYS 196 B CYS 206 H HIS 200 B HIS 210 H THR 205 B THR 215 H VAL 207 B VAL 217 L THR 10 C THR 10 L SER 12 C SER 12 L THR 102 C THR 103 L GLU 105 C GLU 106 L VAL 85 C VAL 86 L GLN 90 C GLN 91 L LEU 33 C LEU 34 L GLN 38 C GLN 39 L ARG 45 C ARG 46 L LEU 46 C LEU 47 L THR 10 C THR 10 L SER 12 C SER 12 L THR 102 C THR 103 L GLU 105 C GLU 106 L VAL 85 C VAL 86 L GLN 90 C GLN 91 L THR 97 C THR 98 L PHE 98 C PHE 99 L ALA 19 C ALA 19 L SER 22 C SER 22 L THR 72 C THR 73 L ILE 75 C ILE 76 L PHE 116 C PHE 117 L ILE 117 C ILE 118 L VAL 133 C VAL 134 L ASN 137 C ASN 138 L SER 174 C SER 175 L THR 178 C THR 179 L GLN 160 C GLN 161 L VAL 163 C VAL 164 D LEU 18 D LEU 18 D ALA 23 D ALA 23 D THR 78 D THR 78 D MET 83 D MET 83 D PHE 68 D PHE 68 D ASP 73 D ASP 73 D GLN 58 D GLN 58 D TYR 60 D TYR 60 D LEU 45 D LEU 45 D ILE 51 D ILE 51 D PHE 34 D PHE 34 D GLN 39 D GLN 39 D ALA 92 D ALA 92 D ARG 98 D ARG 98 D THR 121 D THR 121 D VAL 123 D VAL 123 D ILE 102 D ILE 102 D VAL 104 D VAL 104 D THR 107 D THR 107 D HIS 109 D HIS 109 E MET 4 E MET 4 E SER 7 E SER 7 E VAL 19 E VAL 19 E ALA 25 E ALA 25 E ASP 70 E ASP 70 E ILE 75 E ILE 75 E PHE 62 E PHE 62 E SER 63 E SER 63 E ALA 34 E ALA 34 E GLN 37 E GLN 37 E LYS 45 E LYS 45 E TYR 49 E TYR 49 E THR 85 E THR 85 E TYR 86 E TYR 86 E THR 102 E THR 102 E ARG 103 E ARG 103 1 P 1