0.011125 0.000000 0.000000 -0.000000 0.010500 0.000000 0.000000 -0.000000 0.004388 0.000000 0.000000 0.000000 0000-0003-2430-0713 Marcia, M. 0000-0001-9045-8872 Pyle, A.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 89.890 95.240 227.896 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C8 H18 N2 O4 S 238.305 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HEPES non-polymer C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer Na 1 22.990 SODIUM ION non-polymer C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N N N 74 N C N 75 N C N 76 N N N 77 N C N 78 N C N 79 N C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N S N 85 N O N 86 N O N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N O N 107 N P N 108 N O N 109 N O N 110 N O N 111 N C N 112 R C N 113 N O N 114 S C N 115 N O N 116 R C N 117 N O N 118 R C Y 119 N N Y 120 N C Y 121 N N Y 122 N C N 123 N C N 124 N O N 125 N N N 126 N C N 127 N N N 128 N N Y 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N MG N 148 N NA N 149 N O N 150 N P N 151 N O N 152 N O N 153 N O N 154 N C N 155 R C N 156 N O N 157 S C N 158 N O N 159 R C N 160 N O N 161 R C N 162 N N N 163 N C N 164 N O N 165 N N N 166 N C N 167 N O N 168 N C N 169 N C N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing Y 133 N sing Y 134 N sing Y 135 N doub N 136 N sing Y 137 N sing N 138 N sing Y 139 N doub N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N doub N 184 N sing N 185 N sing UK Nat Commun 2041-1723 11 2837 2837 10.1038/s41467-020-16741-4 32503992 Visualizing group II intron dynamics between the first and second steps of splicing. 2020 0000-0003-4076-8930 0000-0002-3107-8738 0000-0003-4022-5661 0000-0003-2430-0713 10.2210/pdb6t3s/pdb pdb_00006t3s 100 1 N PIXEL 2013-07-10 DECTRIS PILATUS 6M-F SINGLE CRYSTAL SI(220) SIDE SINGLE WAVELENGTH M x-ray 1 0.979500 1.0 24-ID-C APS 0.979500 SYNCHROTRON APS BEAMLINE 24-ID-C 129225.484 Group IIC Intron Ribozyme domains 1-5 and 5'-exon C289U/C358U/G385A 1 syn polymer 24.305 MAGNESIUM ION 20 syn non-polymer 22.990 SODIUM ION 8 syn non-polymer 238.305 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID 3 syn non-polymer 18.015 water 25 nat water no no GGGGUUAUGUGUGCCCGGCAUGGGUGCAGUCUAUAGGGUGAGAGUCCCGAACUGUGAAGGCAGAAGUAACAGUUAGCCUA ACGCAAGGGUGUCCGUGGCGACAUGGAAUCUGAAGGAAGCGGACGGCAAACCUUCGGUCUGAGGAACACGAACUUCAUAU GAGGCUAGGUAUCAAUGGAUGAGUUUGCAUAACAAAACAAAGUCCUUUCUGCCAAAGUUGGUACAGAGUAAAUGAAGCAG AUUGAUGAAGGGAAAGACUGCAUUCUUACCCGGGGAGGUCUGGAAACAGAAGUCAGUAGAAGUCAUAGUACCCUGUUCGC AGGGGAAGGACGGAACAAGUAUGGCGUUCGCGCCUAAGCUUGAACUGCCGUAUACCGAACGGUACGUACGGUAGUGUG GGGGUUAUGUGUGCCCGGCAUGGGUGCAGUCUAUAGGGUGAGAGUCCCGAACUGUGAAGGCAGAAGUAACAGUUAGCCUA ACGCAAGGGUGUCCGUGGCGACAUGGAAUCUGAAGGAAGCGGACGGCAAACCUUCGGUCUGAGGAACACGAACUUCAUAU GAGGCUAGGUAUCAAUGGAUGAGUUUGCAUAACAAAACAAAGUCCUUUCUGCCAAAGUUGGUACAGAGUAAAUGAAGCAG AUUGAUGAAGGGAAAGACUGCAUUCUUACCCGGGGAGGUCUGGAAACAGAAGUCAGUAGAAGUCAUAGUACCCUGUUCGC AGGGGAAGGACGGAACAAGUAUGGCGUUCGCGCCUAAGCUUGAACUGCCGUAUACCGAACGGUACGUACGGUAGUGUG A polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 3.77 67.41 0.170 VAPOR DIFFUSION, HANGING DROP 7.0 50 mM Na-HEPES pH 7.0, 100 mM magnesium acetate, 150 mM sodium chloride, 4% PEG 8000 303 18.743 1 16 A -2 A 182 13.848 A_U-2:U182_A 1 19.672 -3.843 0.615 -2.124 8.614 A -4 A 185 124.712 A_G-4:C185_A 2 17.962 -0.524 0.433 -0.743 0.756 1 20 A 187 A 178 1.192 A_A187:U178_A 3 -7.680 -0.694 0.756 -0.270 0.326 1 20 A 188 A 177 6.888 A_A188:U177_A 4 -16.449 0.364 0.992 0.059 12.659 1 20 A 189 A 176 -2.592 A_A189:U176_A 5 -12.477 0.428 0.406 -0.073 3.557 1 19 A 190 A 175 1.573 A_C190:G175_A 6 -18.563 0.705 0.315 -0.173 -6.603 10 A 191 A 174 -19.983 A_A191:A174_A 7 -10.669 6.442 0.047 -4.439 1.593 10 11 A 192 A 173 -8.089 A_A192:G173_A 8 0.913 -7.080 0.090 -4.972 -5.639 1 A 194 A 172 27.685 A_G194:U172_A 9 2.841 -1.960 0.094 0.784 6.206 1 20 A 195 A 171 1.556 A_U195:A171_A 10 -0.826 -0.472 -0.312 -0.132 -5.249 1 19 A 196 A 170 -3.358 A_C196:G170_A 11 -11.822 -0.249 0.254 -0.143 -6.381 1 19 A 197 A 169 -4.142 A_C197:G169_A 12 -9.055 -0.267 0.745 -0.242 12.968 3 23 A 198 A 50 -63.913 A_U198:A50_A 13 -2.227 -0.190 0.222 3.527 -11.376 1 19 A 3 A 261 1.133 A_G3:C261_A 14 -11.717 0.243 -0.390 0.011 4.264 1 28 A 4 A 107 -5.787 A_U4:G107_A 15 -2.928 2.987 -0.117 -0.753 4.981 5 A 5 A 260 114.533 A_G5:A260_A 16 29.891 3.214 0.297 4.031 -2.135 1 20 A 247 A 24 -11.194 A_A247:U24_A 17 -4.895 0.914 -0.047 -0.095 -4.794 1 19 A 248 A 23 1.998 A_G248:C23_A 18 -13.938 0.495 -0.293 -0.044 -6.744 1 20 A 249 A 22 4.992 A_A249:U22_A 19 -15.096 0.887 0.306 0.265 8.063 1 19 A 250 A 21 6.431 A_C250:G21_A 20 -21.798 0.466 0.228 0.288 2.015 1 20 A 251 A 20 6.497 A_U251:A20_A 21 -19.696 0.287 0.353 0.159 -2.787 1 19 A 252 A 19 2.736 A_G252:C19_A 22 -19.442 0.528 0.687 0.120 1.367 1 19 A 253 A 18 5.886 A_C253:G18_A 23 -8.584 -0.270 0.676 0.072 3.637 1 20 A 254 A 17 4.897 A_A254:U17_A 24 -14.078 -0.235 0.269 -0.121 -0.668 1 28 A 255 A 16 9.884 A_U255:G16_A 25 -10.440 2.682 0.354 -0.557 5.016 1 28 A 256 A 15 9.976 A_U256:G15_A 26 -14.333 2.070 -0.070 -0.117 0.948 1 19 A 257 A 14 -1.991 A_C257:G14_A 27 -5.931 0.602 -0.397 0.053 -7.916 4 24 A 258 A 12 -99.236 A_U258:A12_A 28 0.184 4.580 -0.007 -2.118 -9.681 3 23 A 259 A 110 -68.938 A_U259:A110_A 29 -1.338 -0.954 0.648 3.716 7.952 1 19 A 11 A 108 2.564 A_C11:G108_A 30 -3.099 0.350 -0.226 -0.060 -20.515 1 19 A 10 A 262 -2.859 A_G10:C262_A 31 -10.817 -0.278 -0.546 -0.138 -16.264 1 19 A 9 A 263 -1.631 A_G9:C263_A 32 -12.312 0.019 -0.388 -0.246 1.604 1 19 A 8 A 264 4.141 A_C8:G264_A 33 -6.576 -0.196 -0.252 -0.017 7.600 1 19 A 7 A 265 2.262 A_C7:G265_A 34 -4.246 0.130 0.347 -0.187 -7.424 1 19 A 266 A 6 0.784 A_G266:C6_A 35 -8.200 0.938 0.430 0.221 23.182 1 19 A 267 A 286 -1.714 A_G267:C286_A 36 24.808 -0.062 0.308 -0.186 -6.214 1 19 A 51 A 205 1.554 A_G51:C205_A 37 -11.567 0.022 -0.307 -0.056 -16.559 1 19 A 52 A 204 -2.844 A_G52:C204_A 38 -14.598 0.021 -0.715 -0.130 -10.107 1 19 A 53 A 203 -0.361 A_C53:G203_A 39 -7.857 -0.446 0.084 -0.139 -6.787 1 20 A 54 A 202 3.344 A_A54:U202_A 40 -6.131 0.789 -0.212 0.071 -9.522 1 19 A 55 A 201 -0.910 A_G55:C201_A 41 -10.107 0.266 -0.388 -0.068 -3.887 1 20 A 56 A 200 10.932 A_A56:U200_A 42 -9.924 0.112 -0.135 0.196 -12.813 1 20 A 57 A 199 11.407 A_A57:U199_A 43 -22.192 0.356 0.241 0.327 -6.025 4 24 A 59 A 49 -85.438 A_U59:A49_A 44 -18.541 3.688 -1.448 -2.009 7.789 10 11 A 60 A 48 1.975 A_A60:G48_A 45 -4.651 -7.121 0.401 -4.485 13.303 1 20 A 61 A 47 3.563 A_A61:U47_A 46 1.312 -0.474 0.324 0.049 4.139 1 19 A 62 A 46 0.705 A_C62:G46_A 47 4.142 -0.252 0.598 -0.073 -0.513 1 20 A 63 A 45 0.943 A_A63:U45_A 48 -8.452 -0.191 -0.321 -0.220 -3.069 1 19 A 64 A 44 4.271 A_G64:C44_A 49 -4.889 -0.225 0.252 -0.136 -9.792 1 20 A 65 A 43 -0.444 A_U65:A43_A 50 -8.043 0.656 0.375 -0.222 0.612 4 24 A 26 A 42 -100.241 A_U26:A42_A 51 -4.616 4.225 0.095 -2.226 -8.059 10 11 A 27 A 41 3.871 A_A27:G41_A 52 -3.881 -7.124 -0.569 -4.344 -0.799 1 19 A 28 A 40 9.034 A_G28:C40_A 53 -6.821 -0.107 0.040 0.029 -9.200 1 19 A 29 A 39 2.157 A_G29:C39_A 54 -5.243 -0.781 -0.395 -0.323 -5.659 1 19 A 30 A 38 7.053 A_G30:C38_A 55 -4.085 0.334 0.141 0.038 1.571 4 24 A 31 A 35 -98.376 A_U31:A35_A 56 -0.768 4.511 0.364 -2.228 28.760 6 10 A 32 A 245 -73.589 A_G32:A245_A 57 3.891 3.115 -0.891 -4.021 4.930 2 21 A 66 A 121 -169.178 A_U66:A121_A 58 24.569 0.130 0.916 -0.537 9.597 10 A 67 A 120 -19.608 A_A67:A120_A 59 -26.462 -6.207 -0.454 -4.287 -7.341 1 19 A 68 A 119 -0.586 A_G68:C119_A 60 -0.068 0.284 0.045 -0.137 -3.650 1 19 A 69 A 118 1.959 A_C69:G118_A 61 -0.999 -0.668 0.062 0.043 3.349 1 19 A 70 A 117 3.323 A_C70:G117_A 62 3.217 -0.457 0.105 -0.040 9.812 10 A 71 A 116 -45.403 A_U71:C116_A 63 -12.150 7.122 -0.220 -5.072 9.575 10 11 A 73 A 114 -8.200 A_A73:G114_A 64 3.636 -6.908 -0.227 -4.109 12.413 1 19 A 74 A 113 -6.319 A_C74:G113_A 65 -12.880 0.402 -0.403 -0.400 -0.535 1 19 A 75 A 112 -0.073 A_G75:C112_A 66 -1.906 0.255 0.030 -0.164 0.511 1 19 A 76 A 111 3.001 A_C76:G111_A 67 -8.502 0.398 -0.125 0.018 -3.763 5 A 77 A 109 57.013 A_A77:A109_A 68 -13.686 6.597 0.261 -0.644 -0.378 10 11 A 78 A 104 -9.113 A_A78:G104_A 69 -2.960 -6.801 -0.015 -4.269 8.840 1 28 A 79 A 103 2.885 A_G79:U103_A 70 -2.948 -2.261 0.373 -0.547 -10.764 1 19 A 80 A 102 5.483 A_G80:C102_A 71 -15.451 -0.559 -0.095 -0.022 1.826 1 28 A 81 A 101 8.609 A_G81:U101_A 72 -11.358 -1.825 0.191 -0.353 -3.040 1 20 A 82 A 100 4.741 A_U82:A100_A 73 -14.434 -0.095 0.148 -0.019 8.304 1 20 A 84 A 99 -3.332 A_U84:A99_A 74 -5.407 0.108 -0.812 -0.150 15.669 1 19 A 85 A 98 -1.815 A_C85:G98_A 75 -6.843 -0.310 -0.939 -0.154 3.760 1 19 A 86 A 97 -2.632 A_C86:G97_A 76 3.202 -0.019 -0.274 -0.280 11.321 1 28 A 87 A 96 -5.362 A_G87:U96_A 77 -12.904 -1.797 0.647 -0.778 -2.841 1 20 A 88 A 95 5.659 A_U88:A95_A 78 -18.171 0.282 0.247 -0.373 18.206 1 19 A 89 A 94 2.172 A_G89:C94_A 79 20.555 -0.375 1.127 -0.206 -1.610 10 11 A 122 A 244 -3.090 A_A122:G244_A 80 2.512 -6.910 0.556 -4.034 2.422 1 19 A 123 A 243 6.286 A_C123:G243_A 81 6.297 -1.061 0.301 0.350 22.382 1 19 A 124 A 242 1.424 A_C124:G242_A 82 -10.611 -0.501 -1.001 -0.181 4.588 1 20 A 125 A 241 -1.456 A_U125:A241_A 83 -12.578 -0.630 -0.663 -0.415 -4.001 1 20 A 126 A 240 3.143 A_U126:A240_A 84 -12.357 0.503 -0.146 -0.147 1.717 1 19 A 127 A 239 -0.133 A_C127:G239_A 85 -2.736 0.168 0.426 -0.135 -22.026 1 28 A 128 A 238 4.127 A_G128:U238_A 86 -13.450 -2.415 -0.798 -0.561 3.562 1 28 A 129 A 234 3.586 A_G129:U234_A 87 0.163 -2.283 0.489 -0.361 11.662 1 20 A 130 A 233 10.026 A_U130:A233_A 88 -5.145 -0.909 0.362 0.208 14.526 1 19 A 131 A 232 6.134 A_C131:G232_A 89 -16.605 -0.119 -0.580 0.279 1.927 1 20 A 132 A 231 3.671 A_U132:A231_A 90 -5.205 -0.921 0.371 0.071 7.266 1 19 A 133 A 230 2.902 A_G133:C230_A 91 -10.040 -0.708 -0.144 -0.057 31.494 1 19 A 145 A 229 1.246 A_C145:G229_A 92 -17.576 -0.437 -1.050 0.237 8.149 1 20 A 146 A 228 -9.283 A_U146:A228_A 93 -2.491 -0.803 -0.349 0.008 7.163 1 20 A 147 A 227 -5.560 A_U147:A227_A 94 4.394 -0.602 -0.648 -0.027 7.806 1 19 A 148 A 226 0.165 A_C148:G226_A 95 -17.000 0.030 -0.660 0.224 0.067 1 20 A 149 A 225 9.394 A_A149:U225_A 96 -10.487 0.123 0.660 0.267 -8.878 4 24 A 150 A 138 -89.885 A_U150:A138_A 97 2.717 4.183 0.194 -1.693 22.228 1 19 A 135 A 141 1.144 A_G135:C141_A 98 8.224 0.223 1.427 -0.044 44.320 9 11 A 136 A 140 -8.508 A_G136:A140_A 99 14.520 6.715 0.351 -3.778 30.323 A 153 A 224 -82.588 A_G153:A224_A 100 21.724 1.928 0.354 -4.941 -21.391 A 154 A 222 -92.768 A_A154:A222_A 101 7.074 -3.997 0.459 1.494 29.590 1 A 155 A 180 13.380 A_G155:C180_A 102 1.790 1.384 1.311 0.812 2.960 1 28 A 156 A 221 -14.598 A_G156:U221_A 103 -6.321 -1.959 -0.050 -0.082 17.770 1 19 A 157 A 220 3.426 A_C157:G220_A 104 -9.186 -0.926 -0.828 0.211 24.163 3 A 159 A 219 68.702 A_A159:A219_A 105 -5.328 -2.519 -2.443 -2.557 25.560 3 7 A 160 A 218 74.841 A_G160:G218_A 106 13.182 -1.938 -1.416 -3.359 -5.232 A 161 A 216 -21.699 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0.771 -0.271 1.549 -1.088 A 284 A 269 -10.417 A_G284:G269_A 121 -9.210 7.241 0.495 -2.146 17.268 4 24 A 285 A 268 -92.827 A_U285:A268_A 122 -29.382 4.130 -0.819 -1.919 42.879 1 28 A 320 A 298 0.256 A_G320:U298_A 123 0.711 -2.593 0.676 -0.105 23.065 8 2 A 319 A 299 175.853 A_A319:A299_A 124 21.813 5.706 0.203 -5.161 11.654 4 24 A 301 A 318 -103.598 A_U301:A318_A 125 -13.218 4.269 -0.347 -1.633 14.034 10 A 302 A 317 -3.271 A_A302:G317_A 126 -7.428 -7.521 -0.665 -4.289 22.690 1 19 A 303 A 316 3.071 A_C303:G316_A 127 -22.877 -0.383 -0.711 0.333 3.794 1 19 A 304 A 315 5.920 A_C304:G315_A 128 -22.016 0.534 -0.721 -0.091 -16.453 1 19 A 305 A 314 2.882 A_C305:G314_A 129 -20.119 0.542 0.616 -0.168 -18.366 A 306 A 313 -130.729 A_U306:A313_A 130 15.687 -0.173 0.258 2.969 -4.016 5 A 327 A 290 54.586 A_A327:A290_A 131 -0.591 -6.436 -0.242 -0.175 -3.149 1 19 A 328 A 354 -9.625 A_C328:G354_A 132 -2.796 -0.033 0.170 0.239 3.537 1 20 A 329 A 353 3.805 A_A329:U353_A 133 -8.456 0.872 0.343 0.324 -11.204 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-13.439 -16.412 -44.505 -2.646 -7.537 0.105 20.794 A A 154 155 -1.072 A A 222 180 2.331 -0.351 2.333 -2.003 AA_A154G155:C180A222_AA 94 -14.457 44.210 14.981 -5.484 -9.171 3.336 43.570 A A 155 156 9.318 A A 180 221 3.362 6.732 1.291 -1.525 AA_G155G156:U221C180_AA 95 16.525 -22.875 39.912 -2.752 -0.029 2.885 31.093 A A 156 157 6.593 A A 221 220 2.961 3.522 1.244 -1.412 AA_G156C157:G220U221_AA 96 2.819 -5.276 30.772 -3.239 -1.835 0.176 176.254 A A 157 159 -1.120 A A 220 219 0.219 -2.237 0.416 -5.799 AA_C157A159:A219G220_AA 97 -150.273 75.253 165.353 -2.901 -0.220 -2.184 -29.880 A A 159 160 39.531 A A 219 218 -3.518 -18.623 1.517 0.056 AA_A159G160:G218A219_AA 98 -7.909 -16.788 -22.103 -4.013 4.601 -0.939 138.409 A A 160 161 -66.653 A A 218 216 -3.977 -108.590 -3.161 -2.683 AA_G160G161:C216G218_AA 99 83.126 -51.024 31.064 -2.990 0.500 1.151 8.685 A A 161 162 16.541 A A 216 215 2.709 2.305 -0.225 -2.974 AA_G161U162:A215C216_AA 100 5.105 -36.625 6.640 -23.472 9.969 2.661 48.251 A A 162 163 23.334 A A 215 214 3.314 18.622 0.164 -1.162 AA_U162A163:U214A215_AA 101 3.005 -3.765 44.615 -2.809 0.024 3.367 15.122 A A 163 164 0.980 A A 214 213 3.286 0.253 0.911 -2.234 AA_A163U164:G213U214_AA 102 4.803 -18.571 14.341 -8.707 0.639 2.146 40.194 A A 164 165 26.176 A A 213 212 3.377 17.269 0.717 -1.589 AA_U164C165:G212G213_AA 103 -9.524 14.436 35.200 -4.091 -2.024 3.238 35.996 A A 165 166 1.882 A A 212 211 3.265 1.163 -0.737 -1.710 AA_C165A166:U211G212_AA 104 -1.549 2.508 35.946 -2.932 0.974 3.924 29.804 A A 166 167 -13.849 A A 211 210 3.567 -7.025 -0.246 -2.363 AA_A166A167:U210U211_AA 105 5.058 -9.972 28.547 -2.878 1.714 2.934 40.746 A A 167 168 11.928 A A 210 209 3.092 8.238 0.794 -0.839 AA_A167U168:G209U210_AA 106 4.280 -6.197 39.718 -2.055 -0.698 3.026 55.186 A A 278 279 9.128 A A 275 274 3.213 8.426 1.613 -0.679 AA_A278C279:G274G275_AA 107 -2.101 2.276 54.552 -1.210 -1.861 2.452 33.962 A A 279 280 11.892 A A 274 273 2.797 6.893 0.540 -1.644 AA_C279A280:U273G274_AA 108 2.829 -4.881 33.158 -3.711 -0.556 3.033 32.631 A A 280 281 17.536 A A 273 272 3.746 9.563 0.805 -2.162 AA_A280G281:C272U273_AA 109 9.808 -17.986 29.688 -5.656 0.421 2.965 38.748 A A 281 282 8.917 A A 272 271 3.166 5.887 -0.916 -1.604 AA_G281A282:U271C272_AA 110 -3.524 5.337 38.159 -3.099 0.973 2.879 31.622 A A 282 283 2.239 A A 271 270 3.064 1.216 -0.676 -1.643 AA_A282A283:G270U271_AA 111 4.437 -8.169 31.294 -3.221 1.991 3.007 55.362 A A 283 284 4.732 A A 270 269 3.113 4.392 0.537 -1.436 AA_A283G284:G269G270_AA 112 0.847 -0.912 55.195 -1.786 -0.532 2.022 25.397 A A 284 285 0.966 A A 269 268 2.934 0.421 -3.893 -1.409 AA_G284U285:A268G269_AA 113 5.450 -12.490 24.812 -3.298 10.058 -3.565 -159.891 A A 285 320 82.817 A A 268 298 0.705 -154.311 5.862 -3.586 AA_U285G320:U298A268_AA 114 27.428 14.720 -60.079 1.005 2.832 -3.272 -125.865 A A 320 319 7.325 A A 298 299 -3.261 -13.037 2.120 -0.706 AA_G320A319:A299U298_AA 115 -2.665 -1.497 -125.467 0.289 1.212 -0.009 178.098 A A 319 301 67.964 A A 299 318 0.956 135.527 1.188 -3.109 AA_A319U301:A318A299_AA 116 112.713 -56.523 118.642 -1.655 -0.511 4.847 -10.600 A A 301 302 -12.503 A A 318 317 3.416 2.267 5.765 -0.867 AA_U301A302:G317A318_AA 117 -2.644 -14.582 -10.013 -0.216 25.482 3.398 64.029 A A 302 303 -0.229 A A 317 316 3.359 -0.242 0.893 -0.371 AA_A302C303:G316G317_AA 118 3.329 -3.141 63.952 -0.339 -0.694 3.369 39.000 A A 303 304 17.494 A A 316 315 3.976 11.514 -0.529 -1.627 AA_C303C304:G315G316_AA 119 -1.934 2.938 37.276 -4.037 0.523 3.605 35.456 A A 304 305 17.090 A A 315 314 4.122 10.255 -0.182 -1.251 AA_C304C305:G314G315_AA 120 -3.118 5.196 33.847 -3.876 -0.256 3.102 77.693 A A 305 306 7.099 A A 314 313 3.452 8.882 -1.125 -2.409 AA_C305U306:A313G314_AA 121 7.366 -5.887 76.966 -2.174 1.107 3.398 76.479 A A 327 328 0.895 A A 290 354 3.336 1.106 -0.906 -0.342 AA_A327C328:G354A290_AA 122 -7.872 6.367 76.128 -0.310 0.494 2.177 37.710 A A 328 329 14.234 A A 354 353 2.745 9.089 0.094 -1.959 AA_C328A329:U353G354_AA 123 -5.072 7.943 36.295 -3.934 -0.649 2.298 29.531 A A 329 330 28.107 A A 353 352 3.584 13.765 -0.477 -1.781 AA_A329A330:U352U353_AA 124 3.141 -6.414 26.003 -6.300 1.576 2.148 40.930 A A 330 331 29.489 A A 352 351 3.138 19.782 -0.570 -1.427 AA_A330G331:C351U352_AA 125 -4.418 6.586 35.748 -3.922 0.395 2.693 31.693 A A 331 332 13.991 A A 351 350 3.082 7.559 -0.770 -1.554 AA_G331U332:G350C351_AA 126 -3.013 5.577 30.656 -4.096 0.911 0.755 55.204 A A 332 334 24.546 A A 350 349 1.886 22.050 -5.139 0.064 AA_U332U334:A349G350_AA 127 11.255 -12.529 49.737 -0.489 5.831 3.929 152.539 A A 334 347 0.251 A A 349 333 2.732 0.460 2.839 4.174 AA_U334U347:A333A349_AA 128 145.528 -79.479 73.539 2.143 0.210 3.390 172.016 A A 347 335 -48.230 A A 333 346 0.877 -94.490 1.166 -5.049 AA_U347G335:C346A333_AA 129 140.375 -71.651 84.415 -2.003 0.200 2.547 40.205 A A 335 336 24.990 A A 346 345 3.643 16.394 1.177 -2.446 AA_G335G336:C345C346_AA 130 13.028 -19.859 34.515 -5.469 -0.194 2.834 33.896 A A 336 337 -6.563 A A 345 344 2.675 -3.814 -0.082 -1.635 AA_G336C337:G344C345_AA 131 -3.047 5.244 33.553 -2.286 -0.275 5.411 75.120 A A 337 339 14.074 A A 344 343 6.323 16.394 0.546 -1.518 AA_C337U339:C343G344_AA 132 39.285 -33.728 63.415 -2.254 1.968 -0.114 -154.165 A A 339 340 -78.935 A A 343 342 -6.225 140.261 -3.960 -0.194 AA_U339U340:G342C343_AA 133 61.249 34.470 -32.769 2.312 -2.997 7.187 92.314 A A 292 294 10.051 A A 325 323 7.341 14.419 -0.663 -0.987 AA_A292G294:C323G325_AA 134 -15.882 11.071 90.341 -1.305 -0.224 3.587 28.895 A A 294 295 -4.790 A A 323 322 3.445 -2.365 -0.362 -2.053 AA_G294U295:A322C323_AA 135 -6.906 13.986 27.977 -3.540 -0.952 2.266 31.788 A A 295 296 25.679 A A 322 321 3.127 13.601 0.105 -1.345 AA_U295C296:G321A322_AA 136 3.569 -6.738 28.581 -4.626 0.379 3.886 58.667 A A 355 356 34.341 A A 388 387 4.730 32.069 1.160 -0.455 AA_A355A356:U387G388_AA 137 3.348 -3.586 49.684 -2.886 -0.931 1.808 31.115 A A 356 357 31.598 A A 387 386 3.821 16.058 2.222 -2.000 AA_A356C357:G386U387_AA 138 -5.689 11.195 26.134 -6.615 -5.166 3.560 36.587 A A 357 358 -3.840 A A 386 385 3.613 -2.388 0.370 -2.054 AA_C357U358:A385G386_AA 139 -8.466 13.609 35.550 -2.906 -1.886 2.796 4.738 A A 358 359 -1.468 A A 385 384 2.623 -0.102 1.566 -3.094 AA_U358G359:U384A385_AA 140 3.996 -57.520 2.544 -36.511 17.013 2.664 34.849 A A 359 360 9.913 A A 384 383 2.959 5.906 0.611 -1.732 AA_G359C360:G383U384_AA 141 2.033 -3.412 34.302 -3.670 -0.752 2.827 43.622 A A 360 361 20.678 A A 383 382 3.612 15.070 -0.496 -1.825 AA_C360C361:G382G383_AA 142 -2.408 3.304 40.988 -3.931 0.431 2.188 27.755 A A 361 362 19.768 A A 382 381 2.894 9.262 -0.593 -1.835 AA_C361G362:C381G382_AA 143 -4.622 9.865 25.788 -5.626 0.338 2.836 37.066 A A 362 363 14.198 A A 381 380 3.153 8.942 -0.499 -1.010 AA_G362U363:A380C381_AA 144 -0.460 0.730 36.005 -2.704 0.728 2.174 40.387 A A 363 364 39.020 A A 380 379 3.495 25.102 0.451 -1.019 AA_U363A364:U379A380_AA 145 0.915 -1.423 31.883 -4.244 -0.553 2.956 40.585 A A 364 365 11.318 A A 379 378 3.170 7.792 -0.179 -0.877 AA_A364U365:G378U379_AA 146 -4.234 6.149 39.644 -2.087 -0.190 -1.682 16.388 A A 365 366 77.806 A A 378 375 2.714 15.886 -1.934 -2.583 AA_U365A366:U375G378_AA 147 -2.408 11.795 3.234 -11.990 6.341 3.003 21.674 A A 366 367 -1.987 A A 375 374 3.003 -0.729 0.356 -2.644 AA_A366C367:G374U375_AA 148 8.220 -22.413 20.058 -6.756 2.166 2.387 34.316 A A 367 368 16.142 A A 374 373 3.011 9.407 -0.975 -2.062 AA_C367C368:G373G374_AA 149 -1.327 2.278 33.013 -4.737 1.477 -3.713 179.604 A A 368 369 71.765 A A 373 372 -4.011 143.505 -1.997 3.517 AA_C368G369:C372G373_AA 150 104.244 -52.131 162.658 1.995 0.826 citation citation_author chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn repository Initial release Database references Data collection Database references Derived calculations Refinement description 1 0 2020-05-13 1 1 2020-06-17 1 2 2024-01-24 _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_dist_value _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id France Other government ANR-10-INSB-05-02 France Other government ANR-10-LABX-49-01 United States Howard Hughes Medical Institute 6T3K contains a different mutant of the same RNA (G-mutant, C289G/C358G/G385C) crystallized in the presence of K+, Mg2+ and 5'-exon 6T3N contains a different mutant of the same RNA (G-mutant, C289G/C358G/G385C) crystallized in the presence of Na+, Mg2+ and 5'-exon 6T3R contains the same RNA crystallized in the presence of K+, Mg2+ and 5'-exon N PDBE Y PDBE 2019-10-11 REL REL MG MAGNESIUM ION NA SODIUM ION EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HOH water in vitro transcription system 182710 Oceanobacillus iheyensis sample 1 398 N 4FAX PDB experimental model MG 402 2 MG MG 401 A MG 403 2 MG MG 402 A MG 404 2 MG MG 403 A MG 405 2 MG MG 404 A MG 406 2 MG MG 405 A MG 407 2 MG MG 406 A MG 408 2 MG MG 407 A MG 409 2 MG MG 408 A MG 410 2 MG MG 409 A MG 411 2 MG MG 410 A MG 413 2 MG MG 411 A MG 414 2 MG MG 412 A MG 415 2 MG MG 413 A MG 416 2 MG MG 414 A MG 417 2 MG MG 415 A MG 418 2 MG MG 416 A MG 419 2 MG MG 417 A MG 420 2 MG MG 418 A MG 421 2 MG MG 419 A MG 401 2 MG MG 420 A NA 428 3 NA NA 421 A NA 422 3 NA NA 422 A NA 423 3 NA NA 423 A NA 424 3 NA NA 424 A NA 425 3 NA NA 425 A NA 426 3 NA NA 426 A NA 427 3 NA NA 427 A EPE 429 4 EPE EPE 428 A NA 430 3 NA NA 429 A EPE 431 4 EPE EPE 430 A EPE 432 4 EPE EPE 431 A HOH 511 5 HOH HOH 501 A HOH 532 5 HOH HOH 502 A HOH 502 5 HOH HOH 503 A HOH 518 5 HOH HOH 504 A HOH 514 5 HOH HOH 505 A HOH 501 5 HOH HOH 506 A HOH 509 5 HOH HOH 507 A HOH 507 5 HOH HOH 508 A HOH 519 5 HOH HOH 509 A HOH 515 5 HOH HOH 510 A HOH 528 5 HOH HOH 511 A HOH 531 5 HOH HOH 512 A HOH 529 5 HOH HOH 513 A HOH 512 5 HOH HOH 514 A HOH 503 5 HOH HOH 515 A HOH 527 5 HOH HOH 516 A HOH 510 5 HOH HOH 517 A HOH 504 5 HOH HOH 518 A HOH 505 5 HOH HOH 519 A HOH 524 5 HOH HOH 520 A HOH 530 5 HOH HOH 521 A HOH 506 5 HOH HOH 522 A HOH 508 5 HOH HOH 523 A HOH 520 5 HOH HOH 524 A HOH 513 5 HOH HOH 525 A n 1 -7 A n 2 -6 A n 3 -5 A G -4 n 4 G -4 A U -3 n 5 U -3 A U -2 n 6 U -2 A A -1 n 7 A -1 A U 0 n 8 U 0 A n 9 1 A U 2 n 10 U 2 A G 3 n 11 G 3 A U 4 n 12 U 4 A G 5 n 13 G 5 A C 6 n 14 C 6 A C 7 n 15 C 7 A C 8 n 16 C 8 A G 9 n 17 G 9 A G 10 n 18 G 10 A C 11 n 19 C 11 A A 12 n 20 A 12 A U 13 n 21 U 13 A G 14 n 22 G 14 A G 15 n 23 G 15 A G 16 n 24 G 16 A U 17 n 25 U 17 A G 18 n 26 G 18 A C 19 n 27 C 19 A A 20 n 28 A 20 A G 21 n 29 G 21 A U 22 n 30 U 22 A C 23 n 31 C 23 A U 24 n 32 U 24 A A 25 n 33 A 25 A U 26 n 34 U 26 A A 27 n 35 A 27 A G 28 n 36 G 28 A G 29 n 37 G 29 A G 30 n 38 G 30 A U 31 n 39 U 31 A G 32 n 40 G 32 A A 33 n 41 A 33 A G 34 n 42 G 34 A A 35 n 43 A 35 A G 36 n 44 G 36 A U 37 n 45 U 37 A C 38 n 46 C 38 A C 39 n 47 C 39 A C 40 n 48 C 40 A G 41 n 49 G 41 A A 42 n 50 A 42 A A 43 n 51 A 43 A C 44 n 52 C 44 A U 45 n 53 U 45 A G 46 n 54 G 46 A U 47 n 55 U 47 A G 48 n 56 G 48 A A 49 n 57 A 49 A A 50 n 58 A 50 A G 51 n 59 G 51 A G 52 n 60 G 52 A C 53 n 61 C 53 A A 54 n 62 A 54 A G 55 n 63 G 55 A A 56 n 64 A 56 A A 57 n 65 A 57 A G 58 n 66 G 58 A U 59 n 67 U 59 A A 60 n 68 A 60 A A 61 n 69 A 61 A C 62 n 70 C 62 A A 63 n 71 A 63 A G 64 n 72 G 64 A U 65 n 73 U 65 A U 66 n 74 U 66 A A 67 n 75 A 67 A G 68 n 76 G 68 A C 69 n 77 C 69 A C 70 n 78 C 70 A U 71 n 79 U 71 A A 72 n 80 A 72 A A 73 n 81 A 73 A C 74 n 82 C 74 A G 75 n 83 G 75 A C 76 n 84 C 76 A A 77 n 85 A 77 A A 78 n 86 A 78 A G 79 n 87 G 79 A G 80 n 88 G 80 A G 81 n 89 G 81 A U 82 n 90 U 82 A G 83 n 91 G 83 A U 84 n 92 U 84 A C 85 n 93 C 85 A C 86 n 94 C 86 A G 87 n 95 G 87 A U 88 n 96 U 88 A G 89 n 97 G 89 A G 90 n 98 G 90 A C 91 n 99 C 91 A G 92 n 100 G 92 A A 93 n 101 A 93 A C 94 n 102 C 94 A A 95 n 103 A 95 A U 96 n 104 U 96 A G 97 n 105 G 97 A G 98 n 106 G 98 A A 99 n 107 A 99 A A 100 n 108 A 100 A U 101 n 109 U 101 A C 102 n 110 C 102 A U 103 n 111 U 103 A G 104 n 112 G 104 A A 105 n 113 A 105 A A 106 n 114 A 106 A G 107 n 115 G 107 A G 108 n 116 G 108 A A 109 n 117 A 109 A A 110 n 118 A 110 A G 111 n 119 G 111 A C 112 n 120 C 112 A G 113 n 121 G 113 A G 114 n 122 G 114 A A 115 n 123 A 115 A C 116 n 124 C 116 A G 117 n 125 G 117 A G 118 n 126 G 118 A C 119 n 127 C 119 A A 120 n 128 A 120 A A 121 n 129 A 121 A A 122 n 130 A 122 A C 123 n 131 C 123 A C 124 n 132 C 124 A U 125 n 133 U 125 A U 126 n 134 U 126 A C 127 n 135 C 127 A G 128 n 136 G 128 A G 129 n 137 G 129 A U 130 n 138 U 130 A C 131 n 139 C 131 A U 132 n 140 U 132 A G 133 n 141 G 133 A A 134 n 142 A 134 A G 135 n 143 G 135 A G 136 n 144 G 136 A A 137 n 145 A 137 A A 138 n 146 A 138 A C 139 n 147 C 139 A A 140 n 148 A 140 A C 141 n 149 C 141 A G 142 n 150 G 142 A A 143 n 151 A 143 A A 144 n 152 A 144 A C 145 n 153 C 145 A U 146 n 154 U 146 A U 147 n 155 U 147 A C 148 n 156 C 148 A A 149 n 157 A 149 A U 150 n 158 U 150 A A 151 n 159 A 151 A U 152 n 160 U 152 A G 153 n 161 G 153 A A 154 n 162 A 154 A G 155 n 163 G 155 A G 156 n 164 G 156 A C 157 n 165 C 157 A U 158 n 166 U 158 A A 159 n 167 A 159 A G 160 n 168 G 160 A G 161 n 169 G 161 A U 162 n 170 U 162 A A 163 n 171 A 163 A U 164 n 172 U 164 A C 165 n 173 C 165 A A 166 n 174 A 166 A A 167 n 175 A 167 A U 168 n 176 U 168 A G 169 n 177 G 169 A G 170 n 178 G 170 A A 171 n 179 A 171 A U 172 n 180 U 172 A G 173 n 181 G 173 A A 174 n 182 A 174 A G 175 n 183 G 175 A U 176 n 184 U 176 A U 177 n 185 U 177 A U 178 n 186 U 178 A G 179 n 187 G 179 A C 180 n 188 C 180 A A 181 n 189 A 181 A U 182 n 190 U 182 A n 191 183 A A 184 n 192 A 184 A C 185 n 193 C 185 A A 186 n 194 A 186 A A 187 n 195 A 187 A A 188 n 196 A 188 A A 189 n 197 A 189 A C 190 n 198 C 190 A A 191 n 199 A 191 A A 192 n 200 A 192 A A 193 n 201 A 193 A G 194 n 202 G 194 A U 195 n 203 U 195 A C 196 n 204 C 196 A C 197 n 205 C 197 A U 198 n 206 U 198 A U 199 n 207 U 199 A U 200 n 208 U 200 A C 201 n 209 C 201 A U 202 n 210 U 202 A G 203 n 211 G 203 A C 204 n 212 C 204 A C 205 n 213 C 205 A A 206 n 214 A 206 A A 207 n 215 A 207 A A 208 n 216 A 208 A G 209 n 217 G 209 A U 210 n 218 U 210 A U 211 n 219 U 211 A G 212 n 220 G 212 A G 213 n 221 G 213 A U 214 n 222 U 214 A A 215 n 223 A 215 A C 216 n 224 C 216 A A 217 n 225 A 217 A G 218 n 226 G 218 A A 219 n 227 A 219 A G 220 n 228 G 220 A U 221 n 229 U 221 A A 222 n 230 A 222 A A 223 n 231 A 223 A A 224 n 232 A 224 A U 225 n 233 U 225 A G 226 n 234 G 226 A A 227 n 235 A 227 A A 228 n 236 A 228 A G 229 n 237 G 229 A C 230 n 238 C 230 A A 231 n 239 A 231 A G 232 n 240 G 232 A A 233 n 241 A 233 A U 234 n 242 U 234 A U 235 n 243 U 235 A G 236 n 244 G 236 A A 237 n 245 A 237 A U 238 n 246 U 238 A G 239 n 247 G 239 A A 240 n 248 A 240 A A 241 n 249 A 241 A G 242 n 250 G 242 A G 243 n 251 G 243 A G 244 n 252 G 244 A A 245 n 253 A 245 A A 246 n 254 A 246 A A 247 n 255 A 247 A G 248 n 256 G 248 A A 249 n 257 A 249 A C 250 n 258 C 250 A U 251 n 259 U 251 A G 252 n 260 G 252 A C 253 n 261 C 253 A A 254 n 262 A 254 A U 255 n 263 U 255 A U 256 n 264 U 256 A C 257 n 265 C 257 A U 258 n 266 U 258 A U 259 n 267 U 259 A A 260 n 268 A 260 A C 261 n 269 C 261 A C 262 n 270 C 262 A C 263 n 271 C 263 A G 264 n 272 G 264 A G 265 n 273 G 265 A G 266 n 274 G 266 A G 267 n 275 G 267 A A 268 n 276 A 268 A G 269 n 277 G 269 A G 270 n 278 G 270 A U 271 n 279 U 271 A C 272 n 280 C 272 A U 273 n 281 U 273 A G 274 n 282 G 274 A G 275 n 283 G 275 A A 276 n 284 A 276 A A 277 n 285 A 277 A A 278 n 286 A 278 A C 279 n 287 C 279 A A 280 n 288 A 280 A G 281 n 289 G 281 A A 282 n 290 A 282 A A 283 n 291 A 283 A G 284 n 292 G 284 A U 285 n 293 U 285 A C 286 n 294 C 286 A A 287 n 295 A 287 A G 288 n 296 G 288 A U 289 n 297 U 289 A A 290 n 298 A 290 A G 291 n 299 G 291 A A 292 n 300 A 292 A A 293 n 301 A 293 A G 294 n 302 G 294 A U 295 n 303 U 295 A C 296 n 304 C 296 A A 297 n 305 A 297 A U 298 n 306 U 298 A A 299 n 307 A 299 A G 300 n 308 G 300 A U 301 n 309 U 301 A A 302 n 310 A 302 A C 303 n 311 C 303 A C 304 n 312 C 304 A C 305 n 313 C 305 A U 306 n 314 U 306 A G 307 n 315 G 307 A U 308 n 316 U 308 A U 309 n 317 U 309 A C 310 n 318 C 310 A G 311 n 319 G 311 A C 312 n 320 C 312 A A 313 n 321 A 313 A G 314 n 322 G 314 A G 315 n 323 G 315 A G 316 n 324 G 316 A G 317 n 325 G 317 A A 318 n 326 A 318 A A 319 n 327 A 319 A G 320 n 328 G 320 A G 321 n 329 G 321 A A 322 n 330 A 322 A C 323 n 331 C 323 A G 324 n 332 G 324 A G 325 n 333 G 325 A A 326 n 334 A 326 A A 327 n 335 A 327 A C 328 n 336 C 328 A A 329 n 337 A 329 A A 330 n 338 A 330 A G 331 n 339 G 331 A U 332 n 340 U 332 A A 333 n 341 A 333 A U 334 n 342 U 334 A G 335 n 343 G 335 A G 336 n 344 G 336 A C 337 n 345 C 337 A G 338 n 346 G 338 A U 339 n 347 U 339 A U 340 n 348 U 340 A C 341 n 349 C 341 A G 342 n 350 G 342 A C 343 n 351 C 343 A G 344 n 352 G 344 A C 345 n 353 C 345 A C 346 n 354 C 346 A U 347 n 355 U 347 A A 348 n 356 A 348 A A 349 n 357 A 349 A G 350 n 358 G 350 A C 351 n 359 C 351 A U 352 n 360 U 352 A U 353 n 361 U 353 A G 354 n 362 G 354 A A 355 n 363 A 355 A A 356 n 364 A 356 A C 357 n 365 C 357 A U 358 n 366 U 358 A G 359 n 367 G 359 A C 360 n 368 C 360 A C 361 n 369 C 361 A G 362 n 370 G 362 A U 363 n 371 U 363 A A 364 n 372 A 364 A U 365 n 373 U 365 A A 366 n 374 A 366 A C 367 n 375 C 367 A C 368 n 376 C 368 A G 369 n 377 G 369 A A 370 n 378 A 370 A A 371 n 379 A 371 A C 372 n 380 C 372 A G 373 n 381 G 373 A G 374 n 382 G 374 A U 375 n 383 U 375 A A 376 n 384 A 376 A C 377 n 385 C 377 A G 378 n 386 G 378 A U 379 n 387 U 379 A A 380 n 388 A 380 A C 381 n 389 C 381 A G 382 n 390 G 382 A G 383 n 391 G 383 A U 384 n 392 U 384 A A 385 n 393 A 385 A G 386 n 394 G 386 A U 387 n 395 U 387 A G 388 n 396 G 388 A U 389 n 397 U 389 A G 390 n 398 G 390 A 0.7941 0.9353 -0.8267 2.2587 -0.7965 1.2313 -0.2577 0.3139 -0.1398 -0.8762 0.1607 -0.2034 0.1962 -0.0958 0.0970 0.4552 0.0170 0.0563 0.4017 0.0292 0.3487 refined -24.5180 8.5500 -25.6190 X-RAY DIFFRACTION A -4 A 390 X-RAY DIFFRACTION 1 author_and_software_defined_assembly PISA 1 monomeric none 4060 -232 58020 A U 0 A O3' U 8 1_555 A MG 420 U MG MG 1_555 A U 0 A O2' U 8 1_555 69.3 A U 0 A O3' U 8 1_555 A MG 420 U MG MG 1_555 A U 375 A OP1 U 383 1_555 80.9 A U 0 A O2' U 8 1_555 A MG 420 U MG MG 1_555 A U 375 A OP1 U 383 1_555 91.6 A U 0 A O3' U 8 1_555 A MG 420 U MG MG 1_555 A C 377 A OP2 C 385 1_555 91.9 A U 0 A O2' U 8 1_555 A MG 420 U MG MG 1_555 A C 377 A OP2 C 385 1_555 160.5 A U 375 A OP1 U 383 1_555 A MG 420 U MG MG 1_555 A C 377 A OP2 C 385 1_555 90.3 A U 66 A OP2 U 74 1_555 A MG 408 I MG MG 1_555 A A 67 A OP1 A 75 1_555 86.3 A A 67 A OP2 A 75 1_555 A MG 413 N MG MG 1_555 A G 68 A N7 G 76 1_555 76.5 A A 67 A OP2 A 75 1_555 A MG 413 N MG MG 1_555 A HOH 504 GA O HOH 1_555 67.5 A G 68 A N7 G 76 1_555 A MG 413 N MG MG 1_555 A HOH 504 GA O HOH 1_555 77.4 A C 119 A OP1 C 127 1_555 A MG 406 G MG MG 1_555 A G 239 A OP1 G 247 1_555 152.8 A A 154 A OP2 A 162 1_555 A MG 410 K MG MG 1_555 A G 155 A N7 G 163 1_555 74.4 A G 324 A O6 G 332 1_555 A MG 401 B MG MG 1_555 A G 325 A O6 G 333 1_555 64.2 A U 358 A OP2 U 366 1_555 A NA 421 V NA NA 1_555 A C 377 A OP1 C 385 1_555 75.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A C8 A 181 A C8 A 189 1 Y 1 A N7 A 181 A N7 A 189 1 Y 1 A C5 A 181 A C5 A 189 1 Y 1 A C6 A 181 A C6 A 189 1 Y 1 A N6 A 181 A N6 A 189 1 Y 1 A N1 A 181 A N1 A 189 1 Y 1 A C2 A 181 A C2 A 189 1 Y 1 A N3 A 181 A N3 A 189 1 Y 1 A C4 A 181 A C4 A 189 1 Y 1 A N9 A 184 A N9 A 192 1 Y 1 A C8 A 184 A C8 A 192 1 Y 1 A N7 A 184 A N7 A 192 1 Y 1 A C5 A 184 A C5 A 192 1 Y 1 A C6 A 184 A C6 A 192 1 Y 1 A N6 A 184 A N6 A 192 1 Y 1 A N1 A 184 A N1 A 192 1 Y 1 A C2 A 184 A C2 A 192 1 Y 1 A N3 A 184 A N3 A 192 1 Y 1 A C4 A 184 A C4 A 192 1 Y 1 A N9 A 207 A N9 A 215 1 Y 1 A C8 A 207 A C8 A 215 1 Y 1 A N7 A 207 A N7 A 215 1 Y 1 A C5 A 207 A C5 A 215 1 Y 1 A C6 A 207 A C6 A 215 1 Y 1 A N6 A 207 A N6 A 215 1 Y 1 A N1 A 207 A N1 A 215 1 Y 1 A C2 A 207 A C2 A 215 1 Y 1 A N3 A 207 A N3 A 215 1 Y 1 A C4 A 207 A C4 A 215 1 Y 1 A C8 A 223 A C8 A 231 1 Y 1 A N7 A 223 A N7 A 231 1 Y 1 A C5 A 223 A C5 A 231 1 Y 1 A C6 A 223 A C6 A 231 1 Y 1 A N6 A 223 A N6 A 231 1 Y 1 A N1 A 223 A N1 A 231 1 Y 1 A C2 A 223 A C2 A 231 1 Y 1 A N3 A 223 A N3 A 231 1 Y 1 A C4 A 223 A C4 A 231 1 Y 1 A O5' G 390 A O5' G 398 1 Y 1 A C5' G 390 A C5' G 398 1 Y 1 A C4' G 390 A C4' G 398 1 Y 1 A O4' G 390 A O4' G 398 1 Y 1 A C3' G 390 A C3' G 398 1 Y 1 A O3' G 390 A O3' G 398 1 Y 1 A C2' G 390 A C2' G 398 1 Y 1 A O2' G 390 A O2' G 398 1 Y 1 A C1' G 390 A C1' G 398 1 Y 1 A N9 G 390 A N9 G 398 1 Y 1 A C8 G 390 A C8 G 398 1 Y 1 A N7 G 390 A N7 G 398 1 Y 1 A C5 G 390 A C5 G 398 1 Y 1 A C6 G 390 A C6 G 398 1 Y 1 A O6 G 390 A O6 G 398 1 Y 1 A N1 G 390 A N1 G 398 1 Y 1 A C2 G 390 A C2 G 398 1 Y 1 A N2 G 390 A N2 G 398 1 Y 1 A N3 G 390 A N3 G 398 1 Y 1 A C4 G 390 A C4 G 398 1 Y 1 A N1 EPE 428 CA N1 EPE 1 1 N 1 A C2 EPE 428 CA C2 EPE 1 1 N 1 A C3 EPE 428 CA C3 EPE 1 1 N 1 A N4 EPE 428 CA N4 EPE 1 1 N 1 A C5 EPE 428 CA C5 EPE 1 1 N 1 A C6 EPE 428 CA C6 EPE 1 1 N 1 A C7 EPE 428 CA C7 EPE 1 1 N 1 A C8 EPE 428 CA C8 EPE 1 1 N 1 A O8 EPE 428 CA O8 EPE 1 1 N 1 A C9 EPE 428 CA C9 EPE 1 1 N 1 A G -7 A G 1 1 Y 1 A G -6 A G 2 1 Y 1 A G -5 A G 3 1 Y 1 A G 1 A G 9 1 Y 1 A A 183 A A 191 1 Y 1 A A NA O NA HOH 427 520 1.66 1 A A O2' OP2 A U 35 37 2.09 1 A A O2' OP2 A A 222 224 2.11 1 A A N7 N2 G G 160 218 2.15 1 A A O6 O G HOH 275 501 2.17 1 7.56 1.20 110.70 118.26 A A A O5' P OP2 C C C 44 44 44 N 1 -5.83 0.90 105.70 99.87 A A A O5' P OP2 G G G 58 58 58 N 1 -17.85 2.90 113.30 95.45 A A A C3' C2' O2' U U U 59 59 59 N 1 -5.95 0.90 105.70 99.75 A A A O5' P OP1 G G G 68 68 68 N 1 -7.83 0.90 105.70 97.87 A A A O5' P OP2 C C C 119 119 119 N 1 12.13 1.20 110.70 122.83 A A A O5' P OP1 A A A 174 174 174 N 1 -8.34 0.90 105.70 97.36 A A A O5' P OP2 A A A 174 174 174 N 1 10.60 1.20 110.70 121.30 A A A O5' P OP1 A A A 181 181 181 N 1 -6.47 0.90 105.70 99.23 A A A O5' P OP2 U U U 195 195 195 N 1 -5.73 0.90 105.70 99.97 A A A O5' P OP2 U U U 198 198 198 N 1 11.24 1.60 113.70 124.94 A A A C2' C3' O3' A A A 223 223 223 N 1 -5.51 0.90 105.70 100.19 A A A O5' P OP1 A A A 240 240 240 N 1 9.10 1.20 110.70 119.80 A A A O5' P OP1 A A A 241 241 241 N 1 -8.13 0.90 105.70 97.57 A A A O5' P OP2 A A A 241 241 241 N 1 9.50 1.20 110.70 120.20 A A A O5' P OP1 G G G 242 242 242 N 1 -5.74 0.90 105.70 99.96 A A A O5' P OP2 G G G 242 242 242 N 1 -5.98 0.90 105.70 99.72 A A A O5' P OP2 A A A 247 247 247 N 1 -5.17 0.80 109.40 104.23 A A A O5' C5' C4' A A A 276 276 276 N 1 8.57 1.20 110.70 119.27 A A A O5' P OP1 G G G 284 284 284 N 1 14.45 2.00 113.00 127.45 A A A C4' C3' O3' A A A 287 287 287 N 1 -6.50 0.90 105.70 99.20 A A A O5' P OP2 G G G 288 288 288 N 1 12.74 2.00 113.00 125.74 A A A C4' C3' O3' A A A 297 297 297 N 1 A A O3' P A A 49 50 -0.080 0.012 1.607 1.527 Y 1 A A O3' P A A 245 246 -0.084 0.012 1.607 1.523 Y 393.410 132.2490 56.240 2.6900 -0.0000 -0.0000 -4.6100 -0.0000 1.9200 0.9530 0.9450 U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2296 0.1967 0.1983 3.28 48.89 1550 29194 5.0000 99.7800 42.3640 0.3320 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.4140 0.8000 0.8000 1.2000 4FAX 3.28 48.89 25 8478 94.68 91.15 63 8390 0 393 0.008 0.011 9457 0.003 0.020 3863 1.792 1.283 14742 1.660 3.000 9399 0.113 0.200 1570 0.011 0.020 4707 0.002 0.020 2082 0.3600 0.0000 0.3460 3.3630 110 2112 99.4600 3.279 48.893 6T3S 30804 30804 0.035 0.089 0.074 1 4.700 15.800 201533 6.500 99.900 0.995 3.280 3.460 0.800 28777 4434 0.467 1.197 0.995 1 2.500 6.500 99.800 0.576 3.460 3.670 1.300 28905 4186 0.259 0.681 0.576 1 4.400 6.900 100.000 0.310 3.670 3.920 2.300 26545 3947 0.141 0.367 0.310 1 7.400 6.700 100.000 0.206 3.920 4.230 3.400 23489 3697 0.097 0.247 0.206 1 10.200 6.400 100.000 0.124 4.230 4.640 5.800 23390 3390 0.055 0.145 0.124 1 15.300 6.900 100.000 0.077 4.640 5.180 9.500 20508 3104 0.035 0.090 0.077 1 21.300 6.600 100.000 0.049 5.180 5.990 14.300 17643 2785 0.023 0.059 0.049 1 28.300 6.300 99.700 0.042 5.990 7.330 16.100 15150 2333 0.019 0.049 0.042 1 33.100 6.500 100.000 0.034 7.330 10.370 17.800 11152 1849 0.016 0.040 0.034 1 38.600 6.000 99.800 0.033 10.370 48.893 12.300 5974 1079 0.018 0.041 0.033 1 42.300 5.500 98.100 data reduction XDS VERSION March 30, 2013 data scaling SCALA 3.3.20 refinement REFMAC 5.7.0032 data extraction PDB_EXTRACT 3.25 phasing PHASER 2.5.5 N Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 3 N N 4 N N 4 N N 5 N N metalc 2.565 A U 0 A O3' U 8 1_555 A MG 420 U MG MG 1_555 metalc 1.908 A U 0 A O2' U 8 1_555 A MG 420 U MG MG 1_555 metalc 1.946 A C 6 A OP1 C 14 1_555 A MG 411 L MG MG 1_555 metalc 2.778 A G 28 A O6 G 36 1_555 A NA 424 Y NA NA 1_555 metalc 2.995 A G 46 A O6 G 54 1_555 A MG 402 C MG MG 1_555 metalc 2.109 A U 66 A OP2 U 74 1_555 A MG 408 I MG MG 1_555 metalc 2.420 A A 67 A OP1 A 75 1_555 A MG 408 I MG MG 1_555 metalc 2.259 A A 67 A OP2 A 75 1_555 A MG 413 N MG MG 1_555 metalc 2.458 one A G 68 A N7 G 76 1_555 A MG 413 N MG MG 1_555 metalc 2.319 A A 105 A OP1 A 113 1_555 A MG 407 H MG MG 1_555 metalc 2.354 A G 107 A OP1 G 115 1_555 A MG 403 D MG MG 1_555 metalc 2.162 A C 119 A OP1 C 127 1_555 A MG 406 G MG MG 1_555 metalc 2.293 A G 136 A OP2 G 144 1_555 A MG 418 S MG MG 1_555 metalc 2.308 one A G 142 A N7 G 150 1_555 A MG 417 R MG MG 1_555 metalc 2.800 A C 145 A OP2 C 153 1_555 A MG 419 T MG MG 1_555 metalc 2.003 A A 154 A OP2 A 162 1_555 A MG 410 K MG MG 1_555 metalc 2.505 one A G 155 A N7 G 163 1_555 A MG 410 K MG MG 1_555 metalc 2.053 A G 169 A OP1 G 177 1_555 A MG 412 M MG MG 1_555 metalc 2.853 A G 194 A O6 G 202 1_555 A NA 426 AA NA NA 1_555 metalc 1.889 A G 239 A OP1 G 247 1_555 A MG 406 G MG MG 1_555 metalc 3.082 A G 266 A O6 G 274 1_555 A NA 429 DA NA NA 1_555 metalc 2.076 A G 269 A OP2 G 277 1_555 A NA 427 BA NA NA 1_555 metalc 2.465 A A 283 A OP2 A 291 1_555 A MG 416 Q MG MG 1_555 metalc 2.546 A U 285 A OP1 U 293 1_555 A MG 414 O MG MG 1_555 metalc 2.672 A G 320 A OP2 G 328 1_555 A NA 422 W NA NA 1_555 metalc 2.938 A G 324 A O6 G 332 1_555 A MG 401 B MG MG 1_555 metalc 2.465 A G 325 A O6 G 333 1_555 A MG 401 B MG MG 1_555 metalc 2.412 A U 358 A OP2 U 366 1_555 A NA 421 V NA NA 1_555 metalc 2.030 A C 372 A OP2 C 380 1_555 A MG 404 E MG MG 1_555 metalc 2.193 A U 375 A OP1 U 383 1_555 A MG 420 U MG MG 1_555 metalc 2.061 A C 377 A OP2 C 385 1_555 A MG 420 U MG MG 1_555 metalc 2.795 A C 377 A OP1 C 385 1_555 A NA 421 V NA NA 1_555 metalc 2.081 A MG 413 N MG MG 1_555 A HOH 504 GA O HOH 1_555 metalc 2.277 A NA 423 X NA NA 1_555 A HOH 524 GA O HOH 1_555 hydrog G-C PAIR A G -4 A O6 G 4 1_555 A C 185 A N4 C 193 1_555 hydrog TYPE_16_PAIR A U -2 A N3 U 6 1_555 A U 182 A O2 U 190 1_555 hydrog TYPE_16_PAIR A U -2 A O4 U 6 1_555 A U 182 A N3 U 190 1_555 hydrog WATSON-CRICK A G 3 A N1 G 11 1_555 A C 261 A N3 C 269 1_555 hydrog WATSON-CRICK A G 3 A N2 G 11 1_555 A C 261 A O2 C 269 1_555 hydrog WATSON-CRICK A G 3 A O6 G 11 1_555 A C 261 A N4 C 269 1_555 hydrog TYPE_28_PAIR A U 4 A N3 U 12 1_555 A G 107 A O6 G 115 1_555 hydrog TYPE_28_PAIR A U 4 A O2 U 12 1_555 A G 107 A N1 G 115 1_555 hydrog G-A MISPAIR A G 5 A N2 G 13 1_555 A A 260 A N1 A 268 1_555 hydrog WATSON-CRICK A C 6 A N3 C 14 1_555 A G 266 A N1 G 274 1_555 hydrog WATSON-CRICK A C 6 A N4 C 14 1_555 A G 266 A O6 G 274 1_555 hydrog WATSON-CRICK A C 6 A O2 C 14 1_555 A G 266 A N2 G 274 1_555 hydrog WATSON-CRICK A C 7 A N3 C 15 1_555 A G 265 A N1 G 273 1_555 hydrog WATSON-CRICK A C 7 A N4 C 15 1_555 A G 265 A O6 G 273 1_555 hydrog WATSON-CRICK A C 7 A O2 C 15 1_555 A G 265 A N2 G 273 1_555 hydrog WATSON-CRICK A C 8 A N3 C 16 1_555 A G 264 A N1 G 272 1_555 hydrog WATSON-CRICK A C 8 A N4 C 16 1_555 A G 264 A O6 G 272 1_555 hydrog WATSON-CRICK A C 8 A O2 C 16 1_555 A G 264 A N2 G 272 1_555 hydrog WATSON-CRICK A G 9 A N1 G 17 1_555 A C 263 A N3 C 271 1_555 hydrog WATSON-CRICK A G 9 A N2 G 17 1_555 A C 263 A O2 C 271 1_555 hydrog WATSON-CRICK A G 9 A O6 G 17 1_555 A C 263 A N4 C 271 1_555 hydrog WATSON-CRICK A G 10 A N1 G 18 1_555 A C 262 A N3 C 270 1_555 hydrog WATSON-CRICK A G 10 A N2 G 18 1_555 A C 262 A O2 C 270 1_555 hydrog WATSON-CRICK A G 10 A O6 G 18 1_555 A C 262 A N4 C 270 1_555 hydrog WATSON-CRICK A C 11 A N3 C 19 1_555 A G 108 A N1 G 116 1_555 hydrog WATSON-CRICK A C 11 A N4 C 19 1_555 A G 108 A O6 G 116 1_555 hydrog WATSON-CRICK A C 11 A O2 C 19 1_555 A G 108 A N2 G 116 1_555 hydrog REVERSED HOOGSTEEN A A 12 A N6 A 20 1_555 A U 258 A O2 U 266 1_555 hydrog REVERSED HOOGSTEEN A A 12 A N7 A 20 1_555 A U 258 A N3 U 266 1_555 hydrog WATSON-CRICK A G 14 A N1 G 22 1_555 A C 257 A N3 C 265 1_555 hydrog WATSON-CRICK A G 14 A N2 G 22 1_555 A C 257 A O2 C 265 1_555 hydrog WATSON-CRICK A G 14 A O6 G 22 1_555 A C 257 A N4 C 265 1_555 hydrog TYPE_28_PAIR A G 15 A N1 G 23 1_555 A U 256 A O2 U 264 1_555 hydrog TYPE_28_PAIR A G 15 A O6 G 23 1_555 A U 256 A N3 U 264 1_555 hydrog TYPE_28_PAIR A G 16 A N1 G 24 1_555 A U 255 A O2 U 263 1_555 hydrog TYPE_28_PAIR A G 16 A O6 G 24 1_555 A U 255 A N3 U 263 1_555 hydrog WATSON-CRICK A U 17 A N3 U 25 1_555 A A 254 A N1 A 262 1_555 hydrog WATSON-CRICK A U 17 A O4 U 25 1_555 A A 254 A N6 A 262 1_555 hydrog WATSON-CRICK A G 18 A N1 G 26 1_555 A C 253 A N3 C 261 1_555 hydrog WATSON-CRICK A G 18 A N2 G 26 1_555 A C 253 A O2 C 261 1_555 hydrog WATSON-CRICK A G 18 A O6 G 26 1_555 A C 253 A N4 C 261 1_555 hydrog WATSON-CRICK A C 19 A N3 C 27 1_555 A G 252 A N1 G 260 1_555 hydrog WATSON-CRICK A C 19 A N4 C 27 1_555 A G 252 A O6 G 260 1_555 hydrog WATSON-CRICK A C 19 A O2 C 27 1_555 A G 252 A N2 G 260 1_555 hydrog WATSON-CRICK A A 20 A N1 A 28 1_555 A U 251 A N3 U 259 1_555 hydrog WATSON-CRICK A A 20 A N6 A 28 1_555 A U 251 A O4 U 259 1_555 hydrog WATSON-CRICK A G 21 A N1 G 29 1_555 A C 250 A N3 C 258 1_555 hydrog WATSON-CRICK A G 21 A N2 G 29 1_555 A C 250 A O2 C 258 1_555 hydrog WATSON-CRICK A G 21 A O6 G 29 1_555 A C 250 A N4 C 258 1_555 hydrog WATSON-CRICK A U 22 A N3 U 30 1_555 A A 249 A N1 A 257 1_555 hydrog WATSON-CRICK A U 22 A O4 U 30 1_555 A A 249 A N6 A 257 1_555 hydrog WATSON-CRICK A C 23 A N3 C 31 1_555 A G 248 A N1 G 256 1_555 hydrog WATSON-CRICK A C 23 A N4 C 31 1_555 A G 248 A O6 G 256 1_555 hydrog WATSON-CRICK A C 23 A O2 C 31 1_555 A G 248 A N2 G 256 1_555 hydrog U-A PAIR A U 24 A O2 U 32 1_555 A A 121 A N6 A 129 1_555 hydrog WATSON-CRICK A U 24 A N3 U 32 1_555 A A 247 A N1 A 255 1_555 hydrog WATSON-CRICK A U 24 A O4 U 32 1_555 A A 247 A N6 A 255 1_555 hydrog REVERSED HOOGSTEEN A U 26 A N3 U 34 1_555 A A 42 A N7 A 50 1_555 hydrog REVERSED HOOGSTEEN A U 26 A O2 U 34 1_555 A A 42 A N6 A 50 1_555 hydrog TYPE_11_PAIR A A 27 A N6 A 35 1_555 A G 41 A N3 G 49 1_555 hydrog TYPE_11_PAIR A A 27 A N7 A 35 1_555 A G 41 A N2 G 49 1_555 hydrog WATSON-CRICK A G 28 A N1 G 36 1_555 A C 40 A N3 C 48 1_555 hydrog WATSON-CRICK A G 28 A N2 G 36 1_555 A C 40 A O2 C 48 1_555 hydrog WATSON-CRICK A G 28 A O6 G 36 1_555 A C 40 A N4 C 48 1_555 hydrog WATSON-CRICK A G 29 A N1 G 37 1_555 A C 39 A N3 C 47 1_555 hydrog WATSON-CRICK A G 29 A N2 G 37 1_555 A C 39 A O2 C 47 1_555 hydrog WATSON-CRICK A G 29 A O6 G 37 1_555 A C 39 A N4 C 47 1_555 hydrog WATSON-CRICK A G 30 A N1 G 38 1_555 A C 38 A N3 C 46 1_555 hydrog WATSON-CRICK A G 30 A N2 G 38 1_555 A C 38 A O2 C 46 1_555 hydrog WATSON-CRICK A G 30 A O6 G 38 1_555 A C 38 A N4 C 46 1_555 hydrog REVERSED HOOGSTEEN A U 31 A N3 U 39 1_555 A A 35 A N7 A 43 1_555 hydrog REVERSED HOOGSTEEN A U 31 A O2 U 39 1_555 A A 35 A N6 A 43 1_555 hydrog TYPE_10_PAIR A G 32 A N2 G 40 1_555 A A 245 A N1 A 253 1_555 hydrog TYPE_10_PAIR A G 32 A N3 G 40 1_555 A A 245 A N6 A 253 1_555 hydrog WATSON-CRICK A A 43 A N1 A 51 1_555 A U 65 A N3 U 73 1_555 hydrog WATSON-CRICK A A 43 A N6 A 51 1_555 A U 65 A O4 U 73 1_555 hydrog WATSON-CRICK A C 44 A N3 C 52 1_555 A G 64 A N1 G 72 1_555 hydrog WATSON-CRICK A C 44 A N4 C 52 1_555 A G 64 A O6 G 72 1_555 hydrog WATSON-CRICK A C 44 A O2 C 52 1_555 A G 64 A N2 G 72 1_555 hydrog WATSON-CRICK A U 45 A N3 U 53 1_555 A A 63 A N1 A 71 1_555 hydrog WATSON-CRICK A U 45 A O4 U 53 1_555 A A 63 A N6 A 71 1_555 hydrog WATSON-CRICK A G 46 A N1 G 54 1_555 A C 62 A N3 C 70 1_555 hydrog WATSON-CRICK A G 46 A N2 G 54 1_555 A C 62 A O2 C 70 1_555 hydrog WATSON-CRICK A G 46 A O6 G 54 1_555 A C 62 A N4 C 70 1_555 hydrog WATSON-CRICK A U 47 A N3 U 55 1_555 A A 61 A N1 A 69 1_555 hydrog WATSON-CRICK A U 47 A O4 U 55 1_555 A A 61 A N6 A 69 1_555 hydrog TYPE_11_PAIR A G 48 A N2 G 56 1_555 A A 60 A N7 A 68 1_555 hydrog TYPE_11_PAIR A G 48 A N3 G 56 1_555 A A 60 A N6 A 68 1_555 hydrog REVERSED HOOGSTEEN A A 49 A N6 A 57 1_555 A U 59 A O2 U 67 1_555 hydrog REVERSED HOOGSTEEN A A 49 A N7 A 57 1_555 A U 59 A N3 U 67 1_555 hydrog A-G MISPAIR A A 49 A N3 A 57 1_555 A G 169 A N2 G 177 1_555 hydrog HOOGSTEEN A A 50 A N6 A 58 1_555 A U 198 A O4 U 206 1_555 hydrog HOOGSTEEN A A 50 A N7 A 58 1_555 A U 198 A N3 U 206 1_555 hydrog WATSON-CRICK A G 51 A N1 G 59 1_555 A C 205 A N3 C 213 1_555 hydrog WATSON-CRICK A G 51 A N2 G 59 1_555 A C 205 A O2 C 213 1_555 hydrog WATSON-CRICK A G 51 A O6 G 59 1_555 A C 205 A N4 C 213 1_555 hydrog WATSON-CRICK A G 52 A N1 G 60 1_555 A C 204 A N3 C 212 1_555 hydrog WATSON-CRICK A G 52 A N2 G 60 1_555 A C 204 A O2 C 212 1_555 hydrog WATSON-CRICK A G 52 A O6 G 60 1_555 A C 204 A N4 C 212 1_555 hydrog WATSON-CRICK A C 53 A N3 C 61 1_555 A G 203 A N1 G 211 1_555 hydrog WATSON-CRICK A C 53 A N4 C 61 1_555 A G 203 A O6 G 211 1_555 hydrog WATSON-CRICK A C 53 A O2 C 61 1_555 A G 203 A N2 G 211 1_555 hydrog WATSON-CRICK A A 54 A N1 A 62 1_555 A U 202 A N3 U 210 1_555 hydrog WATSON-CRICK A A 54 A N6 A 62 1_555 A U 202 A O4 U 210 1_555 hydrog WATSON-CRICK A G 55 A N1 G 63 1_555 A C 201 A N3 C 209 1_555 hydrog WATSON-CRICK A G 55 A N2 G 63 1_555 A C 201 A O2 C 209 1_555 hydrog WATSON-CRICK A G 55 A O6 G 63 1_555 A C 201 A N4 C 209 1_555 hydrog WATSON-CRICK A A 56 A N1 A 64 1_555 A U 200 A N3 U 208 1_555 hydrog WATSON-CRICK A A 56 A N6 A 64 1_555 A U 200 A O4 U 208 1_555 hydrog WATSON-CRICK A A 57 A N1 A 65 1_555 A U 199 A N3 U 207 1_555 hydrog WATSON-CRICK A A 57 A N6 A 65 1_555 A U 199 A O4 U 207 1_555 hydrog REVERSED WATSON-CRICK A U 66 A N3 U 74 1_555 A A 121 A N1 A 129 1_555 hydrog REVERSED WATSON-CRICK A U 66 A O2 U 74 1_555 A A 121 A N6 A 129 1_555 hydrog A-A MISPAIR A A 67 A N6 A 75 1_555 A A 120 A N3 A 128 1_555 hydrog A-G MISPAIR A A 67 A N3 A 75 1_555 A G 248 A N2 G 256 1_555 hydrog WATSON-CRICK A G 68 A N1 G 76 1_555 A C 119 A N3 C 127 1_555 hydrog WATSON-CRICK A G 68 A N2 G 76 1_555 A C 119 A O2 C 127 1_555 hydrog WATSON-CRICK A G 68 A O6 G 76 1_555 A C 119 A N4 C 127 1_555 hydrog WATSON-CRICK A C 69 A N3 C 77 1_555 A G 118 A N1 G 126 1_555 hydrog WATSON-CRICK A C 69 A N4 C 77 1_555 A G 118 A O6 G 126 1_555 hydrog WATSON-CRICK A C 69 A O2 C 77 1_555 A G 118 A N2 G 126 1_555 hydrog WATSON-CRICK A C 70 A N3 C 78 1_555 A G 117 A N1 G 125 1_555 hydrog WATSON-CRICK A C 70 A N4 C 78 1_555 A G 117 A O6 G 125 1_555 hydrog WATSON-CRICK A C 70 A O2 C 78 1_555 A G 117 A N2 G 125 1_555 hydrog U-C MISPAIR A U 71 A O2 U 79 1_555 A C 116 A N4 C 124 1_555 hydrog TYPE_11_PAIR A A 73 A N6 A 81 1_555 A G 114 A N3 G 122 1_555 hydrog TYPE_11_PAIR A A 73 A N7 A 81 1_555 A G 114 A N2 G 122 1_555 hydrog WATSON-CRICK A C 74 A N3 C 82 1_555 A G 113 A N1 G 121 1_555 hydrog WATSON-CRICK A C 74 A N4 C 82 1_555 A G 113 A O6 G 121 1_555 hydrog WATSON-CRICK A C 74 A O2 C 82 1_555 A G 113 A N2 G 121 1_555 hydrog WATSON-CRICK A G 75 A N1 G 83 1_555 A C 112 A N3 C 120 1_555 hydrog WATSON-CRICK A G 75 A N2 G 83 1_555 A C 112 A O2 C 120 1_555 hydrog WATSON-CRICK A G 75 A O6 G 83 1_555 A C 112 A N4 C 120 1_555 hydrog WATSON-CRICK A C 76 A N3 C 84 1_555 A G 111 A N1 G 119 1_555 hydrog WATSON-CRICK A C 76 A N4 C 84 1_555 A G 111 A O6 G 119 1_555 hydrog WATSON-CRICK A C 76 A O2 C 84 1_555 A G 111 A N2 G 119 1_555 hydrog A-A MISPAIR A A 77 A N3 A 85 1_555 A A 109 A N6 A 117 1_555 hydrog TYPE_11_PAIR A A 78 A N6 A 86 1_555 A G 104 A N3 G 112 1_555 hydrog TYPE_11_PAIR A A 78 A N7 A 86 1_555 A G 104 A N2 G 112 1_555 hydrog TYPE_28_PAIR A G 79 A N1 G 87 1_555 A U 103 A O2 U 111 1_555 hydrog TYPE_28_PAIR A G 79 A O6 G 87 1_555 A U 103 A N3 U 111 1_555 hydrog WATSON-CRICK A G 80 A N1 G 88 1_555 A C 102 A N3 C 110 1_555 hydrog WATSON-CRICK A G 80 A N2 G 88 1_555 A C 102 A O2 C 110 1_555 hydrog WATSON-CRICK A G 80 A O6 G 88 1_555 A C 102 A N4 C 110 1_555 hydrog TYPE_28_PAIR A G 81 A N1 G 89 1_555 A U 101 A O2 U 109 1_555 hydrog TYPE_28_PAIR A G 81 A O6 G 89 1_555 A U 101 A N3 U 109 1_555 hydrog WATSON-CRICK A U 82 A N3 U 90 1_555 A A 100 A N1 A 108 1_555 hydrog WATSON-CRICK A U 82 A O4 U 90 1_555 A A 100 A N6 A 108 1_555 hydrog WATSON-CRICK A U 84 A N3 U 92 1_555 A A 99 A N1 A 107 1_555 hydrog WATSON-CRICK A U 84 A O4 U 92 1_555 A A 99 A N6 A 107 1_555 hydrog WATSON-CRICK A C 85 A N3 C 93 1_555 A G 98 A N1 G 106 1_555 hydrog WATSON-CRICK A C 85 A N4 C 93 1_555 A G 98 A O6 G 106 1_555 hydrog WATSON-CRICK A C 85 A O2 C 93 1_555 A G 98 A N2 G 106 1_555 hydrog WATSON-CRICK A C 86 A N3 C 94 1_555 A G 97 A N1 G 105 1_555 hydrog WATSON-CRICK A C 86 A N4 C 94 1_555 A G 97 A O6 G 105 1_555 hydrog WATSON-CRICK A C 86 A O2 C 94 1_555 A G 97 A N2 G 105 1_555 hydrog TYPE_28_PAIR A G 87 A N1 G 95 1_555 A U 96 A O2 U 104 1_555 hydrog TYPE_28_PAIR A G 87 A O6 G 95 1_555 A U 96 A N3 U 104 1_555 hydrog WATSON-CRICK A U 88 A N3 U 96 1_555 A A 95 A N1 A 103 1_555 hydrog WATSON-CRICK A U 88 A O4 U 96 1_555 A A 95 A N6 A 103 1_555 hydrog WATSON-CRICK A G 89 A N1 G 97 1_555 A C 94 A N3 C 102 1_555 hydrog WATSON-CRICK A G 89 A N2 G 97 1_555 A C 94 A O2 C 102 1_555 hydrog WATSON-CRICK A G 89 A O6 G 97 1_555 A C 94 A N4 C 102 1_555 hydrog G-A MISPAIR A G 90 A N2 G 98 1_555 A A 93 A N7 A 101 1_555 hydrog G-U MISPAIR A G 92 A N2 G 100 1_555 A U 273 A O2 U 281 1_555 hydrog A-G MISPAIR A A 93 A N3 A 101 1_555 A G 281 A N2 G 289 1_555 hydrog A-G MISPAIR A A 106 A N3 A 114 1_555 A G 374 A N2 G 382 1_555 hydrog HOOGSTEEN A A 110 A N6 A 118 1_555 A U 259 A O4 U 267 1_555 hydrog HOOGSTEEN A A 110 A N7 A 118 1_555 A U 259 A N3 U 267 1_555 hydrog TYPE_11_PAIR A A 122 A N6 A 130 1_555 A G 244 A N3 G 252 1_555 hydrog TYPE_11_PAIR A A 122 A N7 A 130 1_555 A G 244 A N2 G 252 1_555 hydrog WATSON-CRICK A C 123 A N3 C 131 1_555 A G 243 A N1 G 251 1_555 hydrog WATSON-CRICK A C 123 A N4 C 131 1_555 A G 243 A O6 G 251 1_555 hydrog WATSON-CRICK A C 123 A O2 C 131 1_555 A G 243 A N2 G 251 1_555 hydrog WATSON-CRICK A C 124 A N3 C 132 1_555 A G 242 A N1 G 250 1_555 hydrog WATSON-CRICK A C 124 A N4 C 132 1_555 A G 242 A O6 G 250 1_555 hydrog WATSON-CRICK A C 124 A O2 C 132 1_555 A G 242 A N2 G 250 1_555 hydrog WATSON-CRICK A U 125 A N3 U 133 1_555 A A 241 A N1 A 249 1_555 hydrog WATSON-CRICK A U 125 A O4 U 133 1_555 A A 241 A N6 A 249 1_555 hydrog WATSON-CRICK A U 126 A N3 U 134 1_555 A A 240 A N1 A 248 1_555 hydrog WATSON-CRICK A U 126 A O4 U 134 1_555 A A 240 A N6 A 248 1_555 hydrog WATSON-CRICK A C 127 A N3 C 135 1_555 A G 239 A N1 G 247 1_555 hydrog WATSON-CRICK A C 127 A N4 C 135 1_555 A G 239 A O6 G 247 1_555 hydrog WATSON-CRICK A C 127 A O2 C 135 1_555 A G 239 A N2 G 247 1_555 hydrog G-A MISPAIR A G 128 A N2 G 136 1_555 A A 174 A N3 A 182 1_555 hydrog TYPE_28_PAIR A G 128 A N1 G 136 1_555 A U 238 A O2 U 246 1_555 hydrog TYPE_28_PAIR A G 128 A O6 G 136 1_555 A U 238 A N3 U 246 1_555 hydrog TYPE_28_PAIR A G 129 A N1 G 137 1_555 A U 234 A O2 U 242 1_555 hydrog TYPE_28_PAIR A G 129 A O6 G 137 1_555 A U 234 A N3 U 242 1_555 hydrog WATSON-CRICK A U 130 A N3 U 138 1_555 A A 233 A N1 A 241 1_555 hydrog WATSON-CRICK A U 130 A O4 U 138 1_555 A A 233 A N6 A 241 1_555 hydrog WATSON-CRICK A C 131 A N3 C 139 1_555 A G 232 A N1 G 240 1_555 hydrog WATSON-CRICK A C 131 A N4 C 139 1_555 A G 232 A O6 G 240 1_555 hydrog WATSON-CRICK A C 131 A O2 C 139 1_555 A G 232 A N2 G 240 1_555 hydrog WATSON-CRICK A U 132 A N3 U 140 1_555 A A 231 A N1 A 239 1_555 hydrog WATSON-CRICK A U 132 A O4 U 140 1_555 A A 231 A N6 A 239 1_555 hydrog WATSON-CRICK A G 133 A N1 G 141 1_555 A C 230 A N3 C 238 1_555 hydrog WATSON-CRICK A G 133 A N2 G 141 1_555 A C 230 A O2 C 238 1_555 hydrog WATSON-CRICK A G 133 A O6 G 141 1_555 A C 230 A N4 C 238 1_555 hydrog WATSON-CRICK A G 135 A N1 G 143 1_555 A C 141 A N3 C 149 1_555 hydrog WATSON-CRICK A G 135 A N2 G 143 1_555 A C 141 A O2 C 149 1_555 hydrog WATSON-CRICK A G 135 A O6 G 143 1_555 A C 141 A N4 C 149 1_555 hydrog TYPE_11_PAIR A G 136 A N2 G 144 1_555 A A 140 A N7 A 148 1_555 hydrog TYPE_11_PAIR A G 136 A N3 G 144 1_555 A A 140 A N6 A 148 1_555 hydrog REVERSED HOOGSTEEN A A 138 A N6 A 146 1_555 A U 150 A O2 U 158 1_555 hydrog REVERSED HOOGSTEEN A A 138 A N7 A 146 1_555 A U 150 A N3 U 158 1_555 hydrog WATSON-CRICK A C 145 A N3 C 153 1_555 A G 229 A N1 G 237 1_555 hydrog WATSON-CRICK A C 145 A N4 C 153 1_555 A G 229 A O6 G 237 1_555 hydrog WATSON-CRICK A C 145 A O2 C 153 1_555 A G 229 A N2 G 237 1_555 hydrog WATSON-CRICK A U 146 A N3 U 154 1_555 A A 228 A N1 A 236 1_555 hydrog WATSON-CRICK A U 146 A O4 U 154 1_555 A A 228 A N6 A 236 1_555 hydrog WATSON-CRICK A U 147 A N3 U 155 1_555 A A 227 A N1 A 235 1_555 hydrog WATSON-CRICK A U 147 A O4 U 155 1_555 A A 227 A N6 A 235 1_555 hydrog WATSON-CRICK A C 148 A N3 C 156 1_555 A G 226 A N1 G 234 1_555 hydrog WATSON-CRICK A C 148 A N4 C 156 1_555 A G 226 A O6 G 234 1_555 hydrog WATSON-CRICK A C 148 A O2 C 156 1_555 A G 226 A N2 G 234 1_555 hydrog WATSON-CRICK A A 149 A N1 A 157 1_555 A U 225 A N3 U 233 1_555 hydrog WATSON-CRICK A A 149 A N6 A 157 1_555 A U 225 A O4 U 233 1_555 hydrog G-A MISPAIR A G 153 A N2 G 161 1_555 A A 224 A N1 A 232 1_555 hydrog A-A MISPAIR A A 154 A N6 A 162 1_555 A A 222 A N1 A 230 1_555 hydrog G-C PAIR A G 155 A N2 G 163 1_555 A C 180 A N3 C 188 1_555 hydrog TYPE_28_PAIR A G 156 A N1 G 164 1_555 A U 221 A O2 U 229 1_555 hydrog TYPE_28_PAIR A G 156 A O6 G 164 1_555 A U 221 A N3 U 229 1_555 hydrog WATSON-CRICK A C 157 A N3 C 165 1_555 A G 220 A N1 G 228 1_555 hydrog WATSON-CRICK A C 157 A N4 C 165 1_555 A G 220 A O6 G 228 1_555 hydrog WATSON-CRICK A C 157 A O2 C 165 1_555 A G 220 A N2 G 228 1_555 hydrog A-A MISPAIR A A 159 A N6 A 167 1_555 A A 219 A N1 A 227 1_555 hydrog TYPE_7_PAIR A G 160 A N7 G 168 1_555 A G 218 A N1 G 226 1_555 hydrog TYPE_7_PAIR A G 160 A O6 G 168 1_555 A G 218 A N2 G 226 1_555 hydrog G-C PAIR A G 161 A N2 G 169 1_555 A C 216 A N3 C 224 1_555 hydrog WATSON-CRICK A U 162 A N3 U 170 1_555 A A 215 A N1 A 223 1_555 hydrog WATSON-CRICK A U 162 A O4 U 170 1_555 A A 215 A N6 A 223 1_555 hydrog WATSON-CRICK A A 163 A N1 A 171 1_555 A U 214 A N3 U 222 1_555 hydrog WATSON-CRICK A A 163 A N6 A 171 1_555 A U 214 A O4 U 222 1_555 hydrog U-G MISPAIR A U 164 A O2 U 172 1_555 A G 213 A N2 G 221 1_555 hydrog C-G PAIR A C 165 A O2 C 173 1_555 A G 212 A N2 G 220 1_555 hydrog WATSON-CRICK A A 166 A N1 A 174 1_555 A U 211 A N3 U 219 1_555 hydrog WATSON-CRICK A A 166 A N6 A 174 1_555 A U 211 A O4 U 219 1_555 hydrog WATSON-CRICK A A 167 A N1 A 175 1_555 A U 210 A N3 U 218 1_555 hydrog WATSON-CRICK A A 167 A N6 A 175 1_555 A U 210 A O4 U 218 1_555 hydrog TYPE_28_PAIR A U 168 A N3 U 176 1_555 A G 209 A O6 G 217 1_555 hydrog TYPE_28_PAIR A U 168 A O2 U 176 1_555 A G 209 A N1 G 217 1_555 hydrog WATSON-CRICK A G 169 A N1 G 177 1_555 A C 197 A N3 C 205 1_555 hydrog WATSON-CRICK A G 169 A N2 G 177 1_555 A C 197 A O2 C 205 1_555 hydrog WATSON-CRICK A G 169 A O6 G 177 1_555 A C 197 A N4 C 205 1_555 hydrog WATSON-CRICK A G 170 A N1 G 178 1_555 A C 196 A N3 C 204 1_555 hydrog WATSON-CRICK A G 170 A N2 G 178 1_555 A C 196 A O2 C 204 1_555 hydrog WATSON-CRICK A G 170 A O6 G 178 1_555 A C 196 A N4 C 204 1_555 hydrog WATSON-CRICK A A 171 A N1 A 179 1_555 A U 195 A N3 U 203 1_555 hydrog WATSON-CRICK A A 171 A N6 A 179 1_555 A U 195 A O4 U 203 1_555 hydrog U-G MISPAIR A U 172 A O2 U 180 1_555 A G 194 A N2 G 202 1_555 hydrog TYPE_11_PAIR A G 173 A N2 G 181 1_555 A A 192 A N7 A 200 1_555 hydrog TYPE_11_PAIR A G 173 A N3 G 181 1_555 A A 192 A N6 A 200 1_555 hydrog A-A MISPAIR A A 174 A N6 A 182 1_555 A A 191 A N3 A 199 1_555 hydrog WATSON-CRICK A G 175 A N1 G 183 1_555 A C 190 A N3 C 198 1_555 hydrog WATSON-CRICK A G 175 A N2 G 183 1_555 A C 190 A O2 C 198 1_555 hydrog WATSON-CRICK A G 175 A O6 G 183 1_555 A C 190 A N4 C 198 1_555 hydrog WATSON-CRICK A U 176 A N3 U 184 1_555 A A 189 A N1 A 197 1_555 hydrog WATSON-CRICK A U 176 A O4 U 184 1_555 A A 189 A N6 A 197 1_555 hydrog WATSON-CRICK A U 177 A N3 U 185 1_555 A A 188 A N1 A 196 1_555 hydrog WATSON-CRICK A U 177 A O4 U 185 1_555 A A 188 A N6 A 196 1_555 hydrog WATSON-CRICK A U 178 A N3 U 186 1_555 A A 187 A N1 A 195 1_555 hydrog WATSON-CRICK A U 178 A O4 U 186 1_555 A A 187 A N6 A 195 1_555 hydrog TYPE_4_PAIR A G 179 A N2 G 187 1_555 A G 220 A N3 G 228 1_555 hydrog TYPE_4_PAIR A G 179 A N3 G 187 1_555 A G 220 A N2 G 228 1_555 hydrog A-G MISPAIR A A 193 A N3 A 201 1_555 A G 239 A N2 G 247 1_555 hydrog G-A MISPAIR A G 266 A N2 G 274 1_555 A A 319 A N3 A 327 1_555 hydrog WATSON-CRICK A G 267 A N1 G 275 1_555 A C 286 A N3 C 294 1_555 hydrog WATSON-CRICK A G 267 A N2 G 275 1_555 A C 286 A O2 C 294 1_555 hydrog WATSON-CRICK A G 267 A O6 G 275 1_555 A C 286 A N4 C 294 1_555 hydrog TYPE_4_PAIR A G 267 A N2 G 275 1_555 A G 320 A N3 G 328 1_555 hydrog TYPE_4_PAIR A G 267 A N3 G 275 1_555 A G 320 A N2 G 328 1_555 hydrog REVERSED HOOGSTEEN A A 268 A N6 A 276 1_555 A U 285 A O2 U 293 1_555 hydrog REVERSED HOOGSTEEN A A 268 A N7 A 276 1_555 A U 285 A N3 U 293 1_555 hydrog G-G MISPAIR A G 269 A O6 G 277 1_555 A G 284 A N2 G 292 1_555 hydrog TYPE_8_PAIR A G 270 A N1 G 278 1_555 A A 283 A N1 A 291 1_555 hydrog TYPE_8_PAIR A G 270 A O6 G 278 1_555 A A 283 A N6 A 291 1_555 hydrog WATSON-CRICK A U 271 A N3 U 279 1_555 A A 282 A N1 A 290 1_555 hydrog WATSON-CRICK A U 271 A O4 U 279 1_555 A A 282 A N6 A 290 1_555 hydrog WATSON-CRICK A C 272 A N3 C 280 1_555 A G 281 A N1 G 289 1_555 hydrog WATSON-CRICK A C 272 A N4 C 280 1_555 A G 281 A O6 G 289 1_555 hydrog WATSON-CRICK A C 272 A O2 C 280 1_555 A G 281 A N2 G 289 1_555 hydrog WATSON-CRICK A U 273 A N3 U 281 1_555 A A 280 A N1 A 288 1_555 hydrog WATSON-CRICK A U 273 A O4 U 281 1_555 A A 280 A N6 A 288 1_555 hydrog WATSON-CRICK A G 274 A N1 G 282 1_555 A C 279 A N3 C 287 1_555 hydrog WATSON-CRICK A G 274 A N2 G 282 1_555 A C 279 A O2 C 287 1_555 hydrog WATSON-CRICK A G 274 A O6 G 282 1_555 A C 279 A N4 C 287 1_555 hydrog G-A MISPAIR A G 275 A N2 G 283 1_555 A A 278 A N7 A 286 1_555 hydrog TYPE_7_PAIR A G 288 A N1 G 296 1_555 A G 359 A N7 G 367 1_555 hydrog TYPE_7_PAIR A G 288 A N2 G 296 1_555 A G 359 A O6 G 367 1_555 hydrog U-U MISPAIR A U 289 A N3 U 297 1_555 A U 358 A O4 U 366 1_555 hydrog A-A MISPAIR A A 290 A N3 A 298 1_555 A A 327 A N6 A 335 1_555 hydrog TYPE_11_PAIR A A 292 A N6 A 300 1_555 A G 325 A N3 G 333 1_555 hydrog TYPE_11_PAIR A A 292 A N7 A 300 1_555 A G 325 A N2 G 333 1_555 hydrog WATSON-CRICK A G 294 A N1 G 302 1_555 A C 323 A N3 C 331 1_555 hydrog WATSON-CRICK A G 294 A N2 G 302 1_555 A C 323 A O2 C 331 1_555 hydrog WATSON-CRICK A G 294 A O6 G 302 1_555 A C 323 A N4 C 331 1_555 hydrog WATSON-CRICK A U 295 A N3 U 303 1_555 A A 322 A N1 A 330 1_555 hydrog WATSON-CRICK A U 295 A O4 U 303 1_555 A A 322 A N6 A 330 1_555 hydrog WATSON-CRICK A C 296 A N3 C 304 1_555 A G 321 A N1 G 329 1_555 hydrog WATSON-CRICK A C 296 A N4 C 304 1_555 A G 321 A O6 G 329 1_555 hydrog WATSON-CRICK A C 296 A O2 C 304 1_555 A G 321 A N2 G 329 1_555 hydrog TYPE_28_PAIR A U 298 A N3 U 306 1_555 A G 320 A O6 G 328 1_555 hydrog TYPE_28_PAIR A U 298 A O2 U 306 1_555 A G 320 A N1 G 328 1_555 hydrog TYPE_2_PAIR A A 299 A N6 A 307 1_555 A A 319 A N7 A 327 1_555 hydrog TYPE_2_PAIR A A 299 A N7 A 307 1_555 A A 319 A N6 A 327 1_555 hydrog REVERSED HOOGSTEEN A U 301 A N3 U 309 1_555 A A 318 A N7 A 326 1_555 hydrog REVERSED HOOGSTEEN A U 301 A O2 U 309 1_555 A A 318 A N6 A 326 1_555 hydrog A-G MISPAIR A A 302 A N7 A 310 1_555 A G 317 A N2 G 325 1_555 hydrog WATSON-CRICK A C 303 A N3 C 311 1_555 A G 316 A N1 G 324 1_555 hydrog WATSON-CRICK A C 303 A N4 C 311 1_555 A G 316 A O6 G 324 1_555 hydrog WATSON-CRICK A C 303 A O2 C 311 1_555 A G 316 A N2 G 324 1_555 hydrog WATSON-CRICK A C 304 A N3 C 312 1_555 A G 315 A N1 G 323 1_555 hydrog WATSON-CRICK A C 304 A N4 C 312 1_555 A G 315 A O6 G 323 1_555 hydrog WATSON-CRICK A C 304 A O2 C 312 1_555 A G 315 A N2 G 323 1_555 hydrog WATSON-CRICK A C 305 A N3 C 313 1_555 A G 314 A N1 G 322 1_555 hydrog WATSON-CRICK A C 305 A N4 C 313 1_555 A G 314 A O6 G 322 1_555 hydrog WATSON-CRICK A C 305 A O2 C 313 1_555 A G 314 A N2 G 322 1_555 hydrog U-A PAIR A U 306 A O4 U 314 1_555 A A 313 A N6 A 321 1_555 hydrog WATSON-CRICK A C 328 A N3 C 336 1_555 A G 354 A N1 G 362 1_555 hydrog WATSON-CRICK A C 328 A N4 C 336 1_555 A G 354 A O6 G 362 1_555 hydrog WATSON-CRICK A C 328 A O2 C 336 1_555 A G 354 A N2 G 362 1_555 hydrog WATSON-CRICK A A 329 A N1 A 337 1_555 A U 353 A N3 U 361 1_555 hydrog WATSON-CRICK A A 329 A N6 A 337 1_555 A U 353 A O4 U 361 1_555 hydrog WATSON-CRICK A A 330 A N1 A 338 1_555 A U 352 A N3 U 360 1_555 hydrog WATSON-CRICK A A 330 A N6 A 338 1_555 A U 352 A O4 U 360 1_555 hydrog WATSON-CRICK A G 331 A N1 G 339 1_555 A C 351 A N3 C 359 1_555 hydrog WATSON-CRICK A G 331 A N2 G 339 1_555 A C 351 A O2 C 359 1_555 hydrog WATSON-CRICK A G 331 A O6 G 339 1_555 A C 351 A N4 C 359 1_555 hydrog TYPE_28_PAIR A U 332 A N3 U 340 1_555 A G 350 A O6 G 358 1_555 hydrog TYPE_28_PAIR A U 332 A O2 U 340 1_555 A G 350 A N1 G 358 1_555 hydrog REVERSED HOOGSTEEN A A 333 A N6 A 341 1_555 A U 347 A O2 U 355 1_555 hydrog REVERSED HOOGSTEEN A A 333 A N7 A 341 1_555 A U 347 A N3 U 355 1_555 hydrog U-A PAIR A U 334 A O4 U 342 1_555 A A 349 A N6 A 357 1_555 hydrog U-G MISPAIR A U 334 A O4 U 342 1_555 A G 350 A N2 G 358 1_555 hydrog WATSON-CRICK A G 335 A N1 G 343 1_555 A C 346 A N3 C 354 1_555 hydrog WATSON-CRICK A G 335 A N2 G 343 1_555 A C 346 A O2 C 354 1_555 hydrog WATSON-CRICK A G 335 A O6 G 343 1_555 A C 346 A N4 C 354 1_555 hydrog WATSON-CRICK A G 336 A N1 G 344 1_555 A C 345 A N3 C 353 1_555 hydrog WATSON-CRICK A G 336 A N2 G 344 1_555 A C 345 A O2 C 353 1_555 hydrog WATSON-CRICK A G 336 A O6 G 344 1_555 A C 345 A N4 C 353 1_555 hydrog WATSON-CRICK A C 337 A N3 C 345 1_555 A G 344 A N1 G 352 1_555 hydrog WATSON-CRICK A C 337 A N4 C 345 1_555 A G 344 A O6 G 352 1_555 hydrog WATSON-CRICK A C 337 A O2 C 345 1_555 A G 344 A N2 G 352 1_555 hydrog U-G MISPAIR A U 339 A O2 U 347 1_555 A G 342 A N2 G 350 1_555 hydrog U-C MISPAIR A U 339 A O2 U 347 1_555 A C 343 A N4 C 351 1_555 hydrog TYPE_28_PAIR A U 340 A N3 U 348 1_555 A G 342 A O6 G 350 1_555 hydrog TYPE_28_PAIR A U 340 A O2 U 348 1_555 A G 342 A N1 G 350 1_555 hydrog A-G MISPAIR A A 355 A N6 A 363 1_555 A G 388 A N3 G 396 1_555 hydrog A-U PAIR A A 356 A N6 A 364 1_555 A U 387 A O4 U 395 1_555 hydrog WATSON-CRICK A C 357 A N3 C 365 1_555 A G 386 A N1 G 394 1_555 hydrog WATSON-CRICK A C 357 A N4 C 365 1_555 A G 386 A O6 G 394 1_555 hydrog WATSON-CRICK A C 357 A O2 C 365 1_555 A G 386 A N2 G 394 1_555 hydrog WATSON-CRICK A U 358 A N3 U 366 1_555 A A 385 A N1 A 393 1_555 hydrog WATSON-CRICK A U 358 A O4 U 366 1_555 A A 385 A N6 A 393 1_555 hydrog TYPE_28_PAIR A G 359 A N1 G 367 1_555 A U 384 A O2 U 392 1_555 hydrog TYPE_28_PAIR A G 359 A O6 G 367 1_555 A U 384 A N3 U 392 1_555 hydrog C-C MISPAIR A C 360 A N4 C 368 1_555 A C 377 A O2 C 385 1_555 hydrog WATSON-CRICK A C 360 A N3 C 368 1_555 A G 383 A N1 G 391 1_555 hydrog WATSON-CRICK A C 360 A N4 C 368 1_555 A G 383 A O6 G 391 1_555 hydrog WATSON-CRICK A C 360 A O2 C 368 1_555 A G 383 A N2 G 391 1_555 hydrog WATSON-CRICK A C 361 A N3 C 369 1_555 A G 382 A N1 G 390 1_555 hydrog WATSON-CRICK A C 361 A N4 C 369 1_555 A G 382 A O6 G 390 1_555 hydrog WATSON-CRICK A C 361 A O2 C 369 1_555 A G 382 A N2 G 390 1_555 hydrog WATSON-CRICK A G 362 A N1 G 370 1_555 A C 381 A N3 C 389 1_555 hydrog WATSON-CRICK A G 362 A N2 G 370 1_555 A C 381 A O2 C 389 1_555 hydrog WATSON-CRICK A G 362 A O6 G 370 1_555 A C 381 A N4 C 389 1_555 hydrog WATSON-CRICK A U 363 A N3 U 371 1_555 A A 380 A N1 A 388 1_555 hydrog WATSON-CRICK A U 363 A O4 U 371 1_555 A A 380 A N6 A 388 1_555 hydrog WATSON-CRICK A A 364 A N1 A 372 1_555 A U 379 A N3 U 387 1_555 hydrog WATSON-CRICK A A 364 A N6 A 372 1_555 A U 379 A O4 U 387 1_555 hydrog TYPE_28_PAIR A U 365 A N3 U 373 1_555 A G 378 A O6 G 386 1_555 hydrog TYPE_28_PAIR A U 365 A O2 U 373 1_555 A G 378 A N1 G 386 1_555 hydrog WATSON-CRICK A A 366 A N1 A 374 1_555 A U 375 A N3 U 383 1_555 hydrog WATSON-CRICK A A 366 A N6 A 374 1_555 A U 375 A O4 U 383 1_555 hydrog WATSON-CRICK A C 367 A N3 C 375 1_555 A G 374 A N1 G 382 1_555 hydrog WATSON-CRICK A C 367 A N4 C 375 1_555 A G 374 A O6 G 382 1_555 hydrog WATSON-CRICK A C 367 A O2 C 375 1_555 A G 374 A N2 G 382 1_555 hydrog WATSON-CRICK A C 368 A N3 C 376 1_555 A G 373 A N1 G 381 1_555 hydrog WATSON-CRICK A C 368 A N4 C 376 1_555 A G 373 A O6 G 381 1_555 hydrog WATSON-CRICK A C 368 A O2 C 376 1_555 A G 373 A N2 G 381 1_555 hydrog G-C PAIR A G 369 A N2 G 377 1_555 A C 372 A N3 C 380 1_555 RNA Ribozyme, Self-splicing, Retrotransposition, Spliceosome, RNA 6T3S PDB 1 1 6T3S -7 390 6T3S -7 390 6T3S A 1 1 398 binding site for residue MG A 401 A MG 401 Software 2 binding site for residue MG A 402 A MG 402 Software 1 binding site for residue MG A 403 A MG 403 Software 1 binding site for residue MG A 404 A MG 404 Software 1 binding site for residue MG A 405 A MG 405 Software 1 binding site for residue MG A 406 A MG 406 Software 3 binding site for residue MG A 407 A MG 407 Software 1 binding site for residue MG A 408 A MG 408 Software 2 binding site for residue MG A 409 A MG 409 Software 1 binding site for residue MG A 410 A MG 410 Software 2 binding site for residue MG A 411 A MG 411 Software 1 binding site for residue MG A 412 A MG 412 Software 1 binding site for residue MG A 413 A MG 413 Software 3 binding site for residue MG A 414 A MG 414 Software 1 binding site for residue MG A 415 A MG 415 Software 1 binding site for residue MG A 416 A MG 416 Software 1 binding site for residue MG A 417 A MG 417 Software 1 binding site for residue MG A 418 A MG 418 Software 2 binding site for residue MG A 419 A MG 419 Software 1 binding site for residue MG A 420 A MG 420 Software 3 binding site for residue NA A 421 A NA 421 Software 3 binding site for residue NA A 422 A NA 422 Software 1 binding site for residue NA A 423 A NA 423 Software 2 binding site for residue NA A 424 A NA 424 Software 2 binding site for residue NA A 425 A NA 425 Software 1 binding site for residue NA A 426 A NA 426 Software 2 binding site for residue NA A 427 A NA 427 Software 2 binding site for residue EPE A 428 A EPE 428 Software 3 binding site for residue NA A 429 A NA 429 Software 1 binding site for residue EPE A 430 A EPE 430 Software 5 binding site for residue EPE A 431 A EPE 431 Software 5 A G 324 A G 332 2 1_555 A G 325 A G 333 2 1_555 A G 46 A G 54 1 1_555 A G 107 A G 115 1 1_555 A C 372 A C 380 1 1_555 A U 379 A U 387 1 1_555 A C 119 A C 127 3 1_555 A A 174 A A 182 3 1_555 A G 239 A G 247 3 1_555 A A 105 A A 113 1 1_555 A U 66 A U 74 2 1_555 A A 67 A A 75 2 1_555 A G 284 A G 292 1 1_555 A A 154 A A 162 2 1_555 A G 155 A G 163 2 1_555 A C 6 A C 14 1 1_555 A G 169 A G 177 1 1_555 A A 67 A A 75 3 1_555 A G 68 A G 76 3 1_555 A HOH 504 GA HOH 3 1_555 A U 285 A U 293 1 1_555 A C 377 A C 385 1 1_555 A A 283 A A 291 1 1_555 A G 142 A G 150 1 1_555 A G 136 A G 144 2 1_555 A U 225 A U 233 2 1_555 A C 145 A C 153 1 1_555 A U 0 A U 8 3 1_555 A U 375 A U 383 3 1_555 A C 377 A C 385 3 1_555 A U 289 A U 297 3 1_555 A U 358 A U 366 3 1_555 A C 377 A C 385 3 1_555 A G 320 A G 328 1 1_555 A G 15 A G 23 2 1_555 A HOH 524 GA HOH 2 1_555 A A 27 A A 35 2 1_555 A G 28 A G 36 2 1_555 A G 264 A G 272 1 1_555 A G 194 A G 202 2 1_555 A U 195 A U 203 2 1_555 A G 269 A G 277 2 1_555 A HOH 520 GA HOH 2 1_555 A A 115 A A 123 3 1_555 A C 116 A C 124 3 1_555 A G 117 A G 125 3 1_555 A G 266 A G 274 1 1_555 A C 38 A C 46 5 1_555 A C 39 A C 47 5 1_555 A G 242 A G 250 5 1_555 A G 243 A G 251 5 1_555 A G 244 A G 252 5 1_555 A G 79 A G 87 5 1_555 A G 80 A G 88 5 1_555 A U 82 A U 90 5 1_555 A G 97 A G 105 5 1_555 A G 98 A G 106 5 1_555 19 P 21 21 21