0.019762 0.000000 0.006103 0.000000 0.012673 0.000000 0.000000 0.000000 0.018848 0.000000 0.000000 0.000000 Batra, V.K. Wilson, S.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.000 107.160 90.000 50.603 78.909 55.528 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O6 P 291.198 n 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C11 H18 N5 O11 P3 489.209 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]adenosine non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N N N 196 N C N 197 N N N 198 N C N 199 N C N 200 N C N 201 N O N 202 N N N 203 R C N 204 N C N 205 N C N 206 S C N 207 N O N 208 N C N 209 N O N 210 N P N 211 N O N 212 N O N 213 N O N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N O N 229 N P N 230 N O N 231 N O N 232 N O N 233 N C N 234 R C N 235 N O N 236 S C N 237 N O N 238 N C N 239 R C N 240 N N N 241 N C N 242 N O N 243 N N N 244 N C N 245 N O N 246 N C N 247 N C N 248 N C N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H Y 264 N C N 265 N P N 266 N O N 267 N O N 268 N O N 269 N O N 270 N P N 271 N O N 272 N O N 273 N C N 274 N P N 275 N O N 276 N O N 277 N O N 278 N C N 279 R C N 280 N O N 281 R C Y 282 N N Y 283 N C Y 284 N N Y 285 N C Y 286 N N Y 287 N C N 288 N N Y 289 N C Y 290 N N N 291 N C N 292 S C N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N C N 319 N O N 320 N N N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N N N 333 S C N 334 N C N 335 N O N 336 N C N 337 N C N 338 N C N 339 N O N 340 N O N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 N C N 353 N C N 354 N O N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C Y 366 N C Y 367 N N Y 368 N C Y 369 N C Y 370 N N N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N O N 383 N H N 384 N H N 385 N N N 386 S C N 387 N C N 388 N O N 389 S C N 390 N C N 391 N C N 392 N C N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N N N 408 S C N 409 N C N 410 N O N 411 N C N 412 N C N 413 N C N 414 N C N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N N N 430 S C N 431 N C N 432 N O N 433 N C N 434 N C N 435 N C N 436 N C N 437 N N N 438 N O N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N N N 455 S C N 456 N C N 457 N O N 458 N C N 459 N C N 460 N S N 461 N C N 462 N O N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N MG N 475 N NA N 476 N N N 477 S C N 478 N C N 479 N O N 480 N C Y 481 N C Y 482 N C Y 483 N C Y 484 N C Y 485 N C Y 486 N C N 487 N O N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N N N 500 S C N 501 N C N 502 N O N 503 N C N 504 N C N 505 N C N 506 N O N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N N N 517 S C N 518 N C N 519 N O N 520 N C N 521 N O N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N N N 531 S C N 532 N C N 533 N O N 534 R C N 535 N O N 536 N C N 537 N O N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N N N 548 S C N 549 N C N 550 N O N 551 N C Y 552 N C Y 553 N C Y 554 N C Y 555 N N Y 556 N C Y 557 N C Y 558 N C Y 559 N C Y 560 N C N 561 N O N 562 N H N 563 N H N 564 N H N 565 N H N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N H N 574 N N N 575 S C N 576 N C N 577 N O N 578 N C Y 579 N C Y 580 N C Y 581 N C Y 582 N C Y 583 N C Y 584 N C N 585 N O N 586 N O N 587 N H N 588 N H N 589 N H N 590 N H N 591 N H N 592 N H N 593 N H N 594 N H N 595 N H N 596 N H N 597 N H N 598 N N N 599 S C N 600 N C N 601 N O N 602 N C N 603 N C N 604 N C N 605 N O N 606 N H N 607 N H N 608 N H N 609 N H N 610 N H N 611 N H N 612 N H N 613 N H N 614 N H N 615 N H N 616 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N doub N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N doub N 262 N sing N 263 N sing N 264 N sing N 265 N sing Y 266 N doub Y 267 N sing Y 268 N sing Y 269 N doub Y 270 N doub Y 271 N sing N 272 N sing Y 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing Y 278 N sing Y 279 N sing N 280 N sing N 281 N sing N 282 N sing Y 283 N doub N 284 N sing N 285 N doub N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N doub N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N doub N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing Y 373 N sing Y 374 N doub Y 375 N doub N 376 N sing Y 377 N sing N 378 N sing Y 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N doub N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N doub N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N doub N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N doub N 477 N sing N 478 N sing N 479 N sing N 480 N sing Y 481 N doub Y 482 N sing Y 483 N sing N 484 N sing Y 485 N doub N 486 N sing Y 487 N doub N 488 N sing Y 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N doub N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N doub N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N doub N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N doub N 546 N sing N 547 N sing N 548 N sing N 549 N sing Y 550 N doub Y 551 N sing Y 552 N sing N 553 N sing Y 554 N doub Y 555 N sing Y 556 N sing N 557 N sing Y 558 N sing Y 559 N doub N 560 N sing Y 561 N doub N 562 N sing Y 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N doub N 574 N sing N 575 N sing N 576 N sing N 577 N sing Y 578 N doub Y 579 N sing Y 580 N sing N 581 N sing Y 582 N doub N 583 N sing Y 584 N doub N 585 N sing Y 586 N sing N 587 N sing N 588 N sing N 589 N sing N 590 N sing N 591 N sing N 592 N sing N 593 N sing N 594 N sing N 595 N sing N 596 N sing N 597 N doub N 598 N sing N 599 N sing N 600 N sing N 601 N sing N 602 N sing N 603 N sing N 604 N sing N 605 N sing N 606 N sing N 607 N sing N 608 N sing US Biochemistry BICHAW 0033 1520-4995 57 3934 3944 10.1021/acs.biochem.8b00418 29874056 Mapping Functional Substrate-Enzyme Interactions in the pol beta Active Site through Chemical Biology: Structural Responses to Acidity Modification of Incoming dNTPs. 2018 10.2210/pdb6cr5/pdb pdb_00006cr5 100 1 CCD 2015-04-10 MARMOSAIC 225 mm CCD SINGLE WAVELENGTH M x-ray 1 0.9999 1.0 22-BM APS 0.9999 SYNCHROTRON APS BEAMLINE 22-BM 4844.145 Template Strand 1 syn polymer 3045.005 Primer Strand 1 syn polymer 1536.035 Downstream Primer Strand 1 syn polymer 38241.672 DNA polymerase beta 2.7.7.7,4.2.99.- 1 man polymer 489.209 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]adenosine 1 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 22.990 SODIUM ION 3 syn non-polymer 18.015 water 231 nat water no no (DC)(DC)(DG)(DA)(DC)(DT)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC) CCGACTGCGCATCAGC T polydeoxyribonucleotide no yes (DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DOC) GCTGATGCGC P polydeoxyribonucleotide no no (DG)(DT)(DC)(DG)(DG) GTCGG D polydeoxyribonucleotide no no MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 335 POLB 9606 Homo sapiens 562 Escherichia coli Tap56 plasmid Biological sequence Pwl-11 1 2.27 45.88 1.429 VAPOR DIFFUSION, SITTING DROP 16-18% PEG 3350 7.5, 50 mM Imidazole, 350 mM Sodium Acetate 291 -16.180 1 19 T 1 D 5 -3.604 T_DC1:DG5_D 1 -6.969 -0.301 0.413 -0.184 -1.451 1 19 T 2 D 4 3.110 T_DC2:DG4_D 2 -8.100 0.004 0.314 -0.114 -5.637 1 19 T 3 D 3 3.375 T_DG3:DC3_D 3 -13.311 -0.843 -0.029 -0.098 7.414 1 20 T 4 D 2 -4.622 T_DA4:DT2_D 4 -6.532 -0.060 0.047 -0.101 15.179 1 19 T 5 D 1 0.378 T_DC5:DG1_D 5 0.124 0.149 -0.412 -0.003 3.779 1 19 T 7 P 10 0.903 T_DG7:DOC10_P 6 -4.440 -0.213 -0.017 -0.145 6.194 1 19 T 8 P 9 1.716 T_DC8:DG9_P 7 1.854 0.141 -0.546 -0.179 3.647 1 19 T 9 P 8 0.400 T_DG9:DC8_P 8 -1.325 -0.239 -0.082 -0.203 8.780 1 19 T 10 P 7 -1.512 T_DC10:DG7_P 9 -10.112 0.217 -0.011 -0.223 -1.141 1 20 T 11 P 6 3.748 T_DA11:DT6_P 10 -11.060 0.234 0.193 -0.006 4.260 1 20 T 12 P 5 2.720 T_DT12:DA5_P 11 -7.741 -0.184 -0.048 -0.018 -0.553 1 19 T 13 P 4 -2.448 T_DC13:DG4_P 12 -11.270 0.146 -0.127 -0.176 -1.340 1 20 T 14 P 3 1.168 T_DA14:DT3_P 13 -12.334 0.292 0.354 -0.141 4.135 1 19 T 15 P 2 1.677 T_DG15:DC2_P 14 -14.689 -0.300 0.184 -0.309 10.585 1 19 T 16 P 1 1.612 T_DC16:DG1_P 15 -9.957 0.031 0.271 -0.096 3.049 30.908 T T 1 2 12.364 D D 5 4 3.011 6.540 0.036 0.501 TT_DC1DC2:DG4DG5_DD 1 1.052 -1.988 30.206 -0.248 0.124 3.400 42.285 T T 2 3 -2.564 D D 4 3 3.500 -1.849 -0.167 2.358 TT_DC2DG3:DC3DG4_DD 2 -0.393 0.545 42.244 3.468 0.189 2.996 33.765 T T 3 4 2.445 D D 3 2 2.981 1.419 -0.338 0.083 TT_DG3DA4:DT2DC3_DD 3 -1.990 3.429 33.679 -0.067 0.288 3.311 29.715 T T 4 5 1.141 D D 2 1 3.210 0.583 1.113 -0.521 TT_DA4DC5:DG1DT2_DD 4 3.720 -7.272 29.481 -1.138 -1.389 3.258 32.550 T T 7 8 8.468 P P 10 9 3.352 4.715 0.291 -0.480 TT_DG7DC8:DG9DOC10_PP 5 4.579 -8.223 31.897 -1.696 0.297 3.606 37.089 T T 8 9 10.747 P P 9 8 3.474 6.766 -1.174 0.210 TT_DC8DG9:DC8DG9_PP 6 -6.605 10.492 35.905 -0.667 0.872 3.192 31.187 T T 9 10 3.882 P P 8 7 3.216 2.086 -0.374 -0.299 TT_DG9DC10:DG7DC8_PP 7 -0.195 0.362 31.119 -0.946 0.659 3.280 40.482 T T 10 11 11.948 P P 7 6 3.418 8.212 0.024 -0.357 TT_DC10DA11:DT6DG7_PP 8 -1.711 2.490 39.640 -1.468 -0.232 3.171 28.442 T T 11 12 -2.392 P P 6 5 3.138 -1.175 0.200 -0.734 TT_DA11DT12:DA5DT6_PP 9 1.323 -2.694 28.388 -1.234 -0.113 3.301 37.764 T T 12 13 6.957 P P 5 4 3.339 4.488 0.075 -0.093 TT_DT12DC13:DG4DA5_PP 10 3.125 -4.844 37.380 -0.735 0.296 3.167 36.789 T T 13 14 13.963 P P 4 3 3.242 8.727 -0.170 0.034 TT_DC13DA14:DT3DG4_PP 11 -2.658 4.253 35.678 -1.129 -0.091 3.084 29.073 T T 14 15 13.303 P P 3 2 3.215 6.621 0.160 -0.195 TT_DA14DG15:DC2DT3_PP 12 -0.899 1.806 28.311 -1.807 -0.511 2.864 35.887 T T 15 16 9.029 P P 2 1 3.015 5.541 0.436 -0.633 TT_DG15DC16:DG1DC2_PP 13 -1.659 2.703 35.433 -1.744 -0.923 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_conn_type repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2018-07-18 1 1 2023-10-04 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id N RCSB Y RCSB 2018-03-16 REL REL FCJ FCJ SUBJECT OF INVESTIGATION FCJ 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]adenosine MG MAGNESIUM ION NA SODIUM ION HOH water 9606 Human Homo sapiens sample 1 16 9606 Human Homo sapiens sample 1 10 9606 Human Homo sapiens sample 1 5 2FMS PDB experimental model VA1 338 5 FCJ FCJ 401 A MG 339 6 MG MG 402 A NA 341 7 NA NA 403 A NA 342 7 NA NA 404 A NA 340 7 NA NA 405 A HOH 66 8 HOH HOH 101 T HOH 138 8 HOH HOH 102 T HOH 174 8 HOH HOH 103 T HOH 119 8 HOH HOH 104 T HOH 114 8 HOH HOH 105 T HOH 42 8 HOH HOH 106 T HOH 131 8 HOH HOH 107 T HOH 101 8 HOH HOH 108 T HOH 211 8 HOH HOH 109 T HOH 113 8 HOH HOH 110 T HOH 52 8 HOH HOH 111 T HOH 230 8 HOH HOH 112 T HOH 127 8 HOH HOH 113 T HOH 67 8 HOH HOH 114 T HOH 53 8 HOH HOH 115 T HOH 77 8 HOH HOH 116 T HOH 197 8 HOH HOH 117 T HOH 104 8 HOH HOH 118 T HOH 130 8 HOH HOH 119 T HOH 7 8 HOH HOH 120 T HOH 21 8 HOH HOH 121 T HOH 148 8 HOH HOH 122 T HOH 97 8 HOH HOH 123 T HOH 164 8 HOH HOH 124 T HOH 157 8 HOH HOH 125 T HOH 110 8 HOH HOH 126 T HOH 169 8 HOH HOH 127 T HOH 170 8 HOH HOH 128 T HOH 199 8 HOH HOH 129 T HOH 60 8 HOH HOH 101 P HOH 13 8 HOH HOH 102 P HOH 215 8 HOH HOH 103 P HOH 106 8 HOH HOH 104 P HOH 111 8 HOH HOH 105 P HOH 96 8 HOH HOH 106 P HOH 49 8 HOH HOH 107 P HOH 99 8 HOH HOH 108 P HOH 59 8 HOH HOH 109 P HOH 16 8 HOH HOH 110 P HOH 10 8 HOH HOH 101 D HOH 20 8 HOH HOH 102 D HOH 135 8 HOH HOH 103 D HOH 91 8 HOH HOH 104 D HOH 187 8 HOH HOH 105 D HOH 228 8 HOH HOH 106 D HOH 219 8 HOH HOH 501 A HOH 70 8 HOH HOH 502 A HOH 178 8 HOH HOH 503 A HOH 5 8 HOH HOH 504 A HOH 46 8 HOH HOH 505 A HOH 24 8 HOH HOH 506 A HOH 158 8 HOH HOH 507 A HOH 23 8 HOH HOH 508 A HOH 207 8 HOH HOH 509 A HOH 208 8 HOH HOH 510 A HOH 109 8 HOH HOH 511 A HOH 32 8 HOH HOH 512 A HOH 83 8 HOH HOH 513 A HOH 73 8 HOH HOH 514 A HOH 145 8 HOH HOH 515 A HOH 149 8 HOH HOH 516 A HOH 64 8 HOH HOH 517 A HOH 33 8 HOH HOH 518 A HOH 112 8 HOH HOH 519 A HOH 41 8 HOH HOH 520 A HOH 44 8 HOH HOH 521 A HOH 11 8 HOH HOH 522 A HOH 192 8 HOH HOH 523 A HOH 22 8 HOH HOH 524 A HOH 58 8 HOH HOH 525 A HOH 180 8 HOH HOH 526 A HOH 186 8 HOH HOH 527 A HOH 47 8 HOH HOH 528 A HOH 14 8 HOH HOH 529 A HOH 78 8 HOH HOH 530 A HOH 202 8 HOH HOH 531 A HOH 125 8 HOH HOH 532 A HOH 54 8 HOH HOH 533 A HOH 19 8 HOH HOH 534 A HOH 183 8 HOH HOH 535 A HOH 75 8 HOH HOH 536 A HOH 214 8 HOH HOH 537 A HOH 227 8 HOH HOH 538 A HOH 1 8 HOH HOH 539 A HOH 76 8 HOH HOH 540 A HOH 172 8 HOH HOH 541 A HOH 61 8 HOH HOH 542 A HOH 137 8 HOH HOH 543 A HOH 8 8 HOH HOH 544 A HOH 177 8 HOH HOH 545 A HOH 30 8 HOH HOH 546 A HOH 223 8 HOH HOH 547 A HOH 194 8 HOH HOH 548 A HOH 116 8 HOH HOH 549 A HOH 50 8 HOH HOH 550 A HOH 43 8 HOH HOH 551 A HOH 15 8 HOH HOH 552 A HOH 80 8 HOH HOH 553 A HOH 84 8 HOH HOH 554 A HOH 182 8 HOH HOH 555 A HOH 25 8 HOH HOH 556 A HOH 4 8 HOH HOH 557 A HOH 175 8 HOH HOH 558 A HOH 2 8 HOH HOH 559 A HOH 140 8 HOH HOH 560 A HOH 92 8 HOH HOH 561 A HOH 27 8 HOH HOH 562 A HOH 71 8 HOH HOH 563 A HOH 40 8 HOH HOH 564 A HOH 184 8 HOH HOH 565 A HOH 55 8 HOH HOH 566 A HOH 132 8 HOH HOH 567 A HOH 17 8 HOH HOH 568 A HOH 48 8 HOH HOH 569 A HOH 107 8 HOH HOH 570 A HOH 28 8 HOH HOH 571 A HOH 39 8 HOH HOH 572 A HOH 160 8 HOH HOH 573 A HOH 18 8 HOH HOH 574 A HOH 120 8 HOH HOH 575 A HOH 79 8 HOH HOH 576 A HOH 69 8 HOH HOH 577 A HOH 26 8 HOH HOH 578 A HOH 51 8 HOH HOH 579 A HOH 133 8 HOH HOH 580 A HOH 82 8 HOH HOH 581 A HOH 221 8 HOH HOH 582 A HOH 128 8 HOH HOH 583 A HOH 45 8 HOH HOH 584 A HOH 6 8 HOH HOH 585 A HOH 124 8 HOH HOH 586 A HOH 198 8 HOH HOH 587 A HOH 9 8 HOH HOH 588 A HOH 31 8 HOH HOH 589 A HOH 122 8 HOH HOH 590 A HOH 154 8 HOH HOH 591 A HOH 166 8 HOH HOH 592 A HOH 87 8 HOH HOH 593 A HOH 216 8 HOH HOH 594 A HOH 156 8 HOH HOH 595 A HOH 12 8 HOH HOH 596 A HOH 143 8 HOH HOH 597 A HOH 153 8 HOH HOH 598 A HOH 231 8 HOH HOH 599 A HOH 72 8 HOH HOH 600 A HOH 74 8 HOH HOH 601 A HOH 196 8 HOH HOH 602 A HOH 88 8 HOH HOH 603 A HOH 105 8 HOH HOH 604 A HOH 141 8 HOH HOH 605 A HOH 63 8 HOH HOH 606 A HOH 203 8 HOH HOH 607 A HOH 34 8 HOH HOH 608 A HOH 225 8 HOH HOH 609 A HOH 94 8 HOH HOH 610 A HOH 123 8 HOH HOH 611 A HOH 95 8 HOH HOH 612 A HOH 81 8 HOH HOH 613 A HOH 205 8 HOH HOH 614 A HOH 36 8 HOH HOH 615 A HOH 115 8 HOH HOH 616 A HOH 29 8 HOH HOH 617 A HOH 173 8 HOH HOH 618 A HOH 155 8 HOH HOH 619 A HOH 35 8 HOH HOH 620 A HOH 213 8 HOH HOH 621 A HOH 100 8 HOH HOH 622 A HOH 62 8 HOH HOH 623 A HOH 139 8 HOH HOH 624 A HOH 165 8 HOH HOH 625 A HOH 185 8 HOH HOH 626 A HOH 117 8 HOH HOH 627 A HOH 90 8 HOH HOH 628 A HOH 93 8 HOH HOH 629 A HOH 118 8 HOH HOH 630 A HOH 102 8 HOH HOH 631 A HOH 144 8 HOH HOH 632 A HOH 89 8 HOH HOH 633 A HOH 162 8 HOH HOH 634 A HOH 85 8 HOH HOH 635 A HOH 3 8 HOH HOH 636 A HOH 189 8 HOH HOH 637 A HOH 57 8 HOH HOH 638 A HOH 151 8 HOH HOH 639 A HOH 163 8 HOH HOH 640 A HOH 181 8 HOH HOH 641 A HOH 168 8 HOH HOH 642 A HOH 86 8 HOH HOH 643 A HOH 142 8 HOH HOH 644 A HOH 176 8 HOH HOH 645 A HOH 129 8 HOH HOH 646 A HOH 56 8 HOH HOH 647 A HOH 201 8 HOH HOH 648 A HOH 68 8 HOH HOH 649 A HOH 103 8 HOH HOH 650 A HOH 218 8 HOH HOH 651 A HOH 126 8 HOH HOH 652 A HOH 98 8 HOH HOH 653 A HOH 226 8 HOH HOH 654 A HOH 200 8 HOH HOH 655 A HOH 152 8 HOH HOH 656 A HOH 150 8 HOH HOH 657 A HOH 229 8 HOH HOH 658 A HOH 193 8 HOH HOH 659 A HOH 222 8 HOH HOH 660 A HOH 121 8 HOH HOH 661 A HOH 190 8 HOH HOH 662 A HOH 171 8 HOH HOH 663 A HOH 37 8 HOH HOH 664 A HOH 38 8 HOH HOH 665 A HOH 188 8 HOH HOH 666 A HOH 191 8 HOH HOH 667 A HOH 204 8 HOH HOH 668 A HOH 209 8 HOH HOH 669 A HOH 65 8 HOH HOH 670 A HOH 167 8 HOH HOH 671 A HOH 159 8 HOH HOH 672 A HOH 195 8 HOH HOH 673 A HOH 108 8 HOH HOH 674 A HOH 136 8 HOH HOH 675 A HOH 206 8 HOH HOH 676 A HOH 210 8 HOH HOH 677 A HOH 146 8 HOH HOH 678 A HOH 212 8 HOH HOH 679 A HOH 134 8 HOH HOH 680 A HOH 179 8 HOH HOH 681 A HOH 217 8 HOH HOH 682 A HOH 224 8 HOH HOH 683 A HOH 220 8 HOH HOH 684 A HOH 147 8 HOH HOH 685 A HOH 161 8 HOH HOH 686 A DC 1 n 1 DC 1 T DC 2 n 2 DC 2 T DG 3 n 3 DG 3 T DA 4 n 4 DA 4 T DC 5 n 5 DC 5 T DT 6 n 6 DT 6 T DG 7 n 7 DG 7 T DC 8 n 8 DC 8 T DG 9 n 9 DG 9 T DC 10 n 10 DC 10 T DA 11 n 11 DA 11 T DT 12 n 12 DT 12 T DC 13 n 13 DC 13 T DA 14 n 14 DA 14 T DG 15 n 15 DG 15 T DC 16 n 16 DC 16 T DG 1 n 1 DG 1 P DC 2 n 2 DC 2 P DT 3 n 3 DT 3 P DG 4 n 4 DG 4 P DA 5 n 5 DA 5 P DT 6 n 6 DT 6 P DG 7 n 7 DG 7 P DC 8 n 8 DC 8 P DG 9 n 9 DG 9 P DOC 10 n 10 DOC 10 P DG 1 n 1 DG 1 D DT 2 n 2 DT 2 D DC 3 n 3 DC 3 D DG 4 n 4 DG 4 D DG 5 n 5 DG 5 D n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A THR 10 n 10 THR 10 A LEU 11 n 11 LEU 11 A ASN 12 n 12 ASN 12 A GLY 13 n 13 GLY 13 A GLY 14 n 14 GLY 14 A ILE 15 n 15 ILE 15 A THR 16 n 16 THR 16 A ASP 17 n 17 ASP 17 A MET 18 n 18 MET 18 A LEU 19 n 19 LEU 19 A THR 20 n 20 THR 20 A GLU 21 n 21 GLU 21 A LEU 22 n 22 LEU 22 A ALA 23 n 23 ALA 23 A ASN 24 n 24 ASN 24 A PHE 25 n 25 PHE 25 A GLU 26 n 26 GLU 26 A LYS 27 n 27 LYS 27 A ASN 28 n 28 ASN 28 A VAL 29 n 29 VAL 29 A SER 30 n 30 SER 30 A GLN 31 n 31 GLN 31 A ALA 32 n 32 ALA 32 A ILE 33 n 33 ILE 33 A HIS 34 n 34 HIS 34 A LYS 35 n 35 LYS 35 A TYR 36 n 36 TYR 36 A ASN 37 n 37 ASN 37 A ALA 38 n 38 ALA 38 A TYR 39 n 39 TYR 39 A ARG 40 n 40 ARG 40 A LYS 41 n 41 LYS 41 A ALA 42 n 42 ALA 42 A ALA 43 n 43 ALA 43 A SER 44 n 44 SER 44 A VAL 45 n 45 VAL 45 A ILE 46 n 46 ILE 46 A ALA 47 n 47 ALA 47 A LYS 48 n 48 LYS 48 A TYR 49 n 49 TYR 49 A PRO 50 n 50 PRO 50 A HIS 51 n 51 HIS 51 A LYS 52 n 52 LYS 52 A ILE 53 n 53 ILE 53 A LYS 54 n 54 LYS 54 A SER 55 n 55 SER 55 A GLY 56 n 56 GLY 56 A ALA 57 n 57 ALA 57 A GLU 58 n 58 GLU 58 A ALA 59 n 59 ALA 59 A LYS 60 n 60 LYS 60 A LYS 61 n 61 LYS 61 A LEU 62 n 62 LEU 62 A PRO 63 n 63 PRO 63 A GLY 64 n 64 GLY 64 A VAL 65 n 65 VAL 65 A GLY 66 n 66 GLY 66 A THR 67 n 67 THR 67 A LYS 68 n 68 LYS 68 A ILE 69 n 69 ILE 69 A ALA 70 n 70 ALA 70 A GLU 71 n 71 GLU 71 A LYS 72 n 72 LYS 72 A ILE 73 n 73 ILE 73 A ASP 74 n 74 ASP 74 A GLU 75 n 75 GLU 75 A PHE 76 n 76 PHE 76 A LEU 77 n 77 LEU 77 A ALA 78 n 78 ALA 78 A THR 79 n 79 THR 79 A GLY 80 n 80 GLY 80 A LYS 81 n 81 LYS 81 A LEU 82 n 82 LEU 82 A ARG 83 n 83 ARG 83 A LYS 84 n 84 LYS 84 A LEU 85 n 85 LEU 85 A GLU 86 n 86 GLU 86 A LYS 87 n 87 LYS 87 A ILE 88 n 88 ILE 88 A ARG 89 n 89 ARG 89 A GLN 90 n 90 GLN 90 A ASP 91 n 91 ASP 91 A ASP 92 n 92 ASP 92 A THR 93 n 93 THR 93 A SER 94 n 94 SER 94 A SER 95 n 95 SER 95 A SER 96 n 96 SER 96 A ILE 97 n 97 ILE 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A LEU 100 n 100 LEU 100 A THR 101 n 101 THR 101 A ARG 102 n 102 ARG 102 A VAL 103 n 103 VAL 103 A SER 104 n 104 SER 104 A GLY 105 n 105 GLY 105 A ILE 106 n 106 ILE 106 A GLY 107 n 107 GLY 107 A PRO 108 n 108 PRO 108 A SER 109 n 109 SER 109 A ALA 110 n 110 ALA 110 A ALA 111 n 111 ALA 111 A ARG 112 n 112 ARG 112 A LYS 113 n 113 LYS 113 A PHE 114 n 114 PHE 114 A VAL 115 n 115 VAL 115 A ASP 116 n 116 ASP 116 A GLU 117 n 117 GLU 117 A GLY 118 n 118 GLY 118 A ILE 119 n 119 ILE 119 A LYS 120 n 120 LYS 120 A THR 121 n 121 THR 121 A LEU 122 n 122 LEU 122 A GLU 123 n 123 GLU 123 A ASP 124 n 124 ASP 124 A LEU 125 n 125 LEU 125 A ARG 126 n 126 ARG 126 A LYS 127 n 127 LYS 127 A ASN 128 n 128 ASN 128 A GLU 129 n 129 GLU 129 A ASP 130 n 130 ASP 130 A LYS 131 n 131 LYS 131 A LEU 132 n 132 LEU 132 A ASN 133 n 133 ASN 133 A HIS 134 n 134 HIS 134 A HIS 135 n 135 HIS 135 A GLN 136 n 136 GLN 136 A ARG 137 n 137 ARG 137 A ILE 138 n 138 ILE 138 A GLY 139 n 139 GLY 139 A LEU 140 n 140 LEU 140 A LYS 141 n 141 LYS 141 A TYR 142 n 142 TYR 142 A PHE 143 n 143 PHE 143 A GLY 144 n 144 GLY 144 A ASP 145 n 145 ASP 145 A PHE 146 n 146 PHE 146 A GLU 147 n 147 GLU 147 A LYS 148 n 148 LYS 148 A ARG 149 n 149 ARG 149 A ILE 150 n 150 ILE 150 A PRO 151 n 151 PRO 151 A ARG 152 n 152 ARG 152 A GLU 153 n 153 GLU 153 A GLU 154 n 154 GLU 154 A MET 155 n 155 MET 155 A LEU 156 n 156 LEU 156 A GLN 157 n 157 GLN 157 A MET 158 n 158 MET 158 A GLN 159 n 159 GLN 159 A ASP 160 n 160 ASP 160 A ILE 161 n 161 ILE 161 A VAL 162 n 162 VAL 162 A LEU 163 n 163 LEU 163 A ASN 164 n 164 ASN 164 A GLU 165 n 165 GLU 165 A VAL 166 n 166 VAL 166 A LYS 167 n 167 LYS 167 A LYS 168 n 168 LYS 168 A VAL 169 n 169 VAL 169 A ASP 170 n 170 ASP 170 A SER 171 n 171 SER 171 A GLU 172 n 172 GLU 172 A TYR 173 n 173 TYR 173 A ILE 174 n 174 ILE 174 A ALA 175 n 175 ALA 175 A THR 176 n 176 THR 176 A VAL 177 n 177 VAL 177 A CYS 178 n 178 CYS 178 A GLY 179 n 179 GLY 179 A SER 180 n 180 SER 180 A PHE 181 n 181 PHE 181 A ARG 182 n 182 ARG 182 A ARG 183 n 183 ARG 183 A GLY 184 n 184 GLY 184 A ALA 185 n 185 ALA 185 A GLU 186 n 186 GLU 186 A SER 187 n 187 SER 187 A SER 188 n 188 SER 188 A GLY 189 n 189 GLY 189 A ASP 190 n 190 ASP 190 A MET 191 n 191 MET 191 A ASP 192 n 192 ASP 192 A VAL 193 n 193 VAL 193 A LEU 194 n 194 LEU 194 A LEU 195 n 195 LEU 195 A THR 196 n 196 THR 196 A HIS 197 n 197 HIS 197 A PRO 198 n 198 PRO 198 A SER 199 n 199 SER 199 A PHE 200 n 200 PHE 200 A THR 201 n 201 THR 201 A SER 202 n 202 SER 202 A GLU 203 n 203 GLU 203 A SER 204 n 204 SER 204 A THR 205 n 205 THR 205 A LYS 206 n 206 LYS 206 A GLN 207 n 207 GLN 207 A PRO 208 n 208 PRO 208 A LYS 209 n 209 LYS 209 A LEU 210 n 210 LEU 210 A LEU 211 n 211 LEU 211 A HIS 212 n 212 HIS 212 A GLN 213 n 213 GLN 213 A VAL 214 n 214 VAL 214 A VAL 215 n 215 VAL 215 A GLU 216 n 216 GLU 216 A GLN 217 n 217 GLN 217 A LEU 218 n 218 LEU 218 A GLN 219 n 219 GLN 219 A LYS 220 n 220 LYS 220 A VAL 221 n 221 VAL 221 A HIS 222 n 222 HIS 222 A PHE 223 n 223 PHE 223 A ILE 224 n 224 ILE 224 A THR 225 n 225 THR 225 A ASP 226 n 226 ASP 226 A THR 227 n 227 THR 227 A LEU 228 n 228 LEU 228 A SER 229 n 229 SER 229 A LYS 230 n 230 LYS 230 A GLY 231 n 231 GLY 231 A GLU 232 n 232 GLU 232 A THR 233 n 233 THR 233 A LYS 234 n 234 LYS 234 A PHE 235 n 235 PHE 235 A MET 236 n 236 MET 236 A GLY 237 n 237 GLY 237 A VAL 238 n 238 VAL 238 A CYS 239 n 239 CYS 239 A GLN 240 n 240 GLN 240 A LEU 241 n 241 LEU 241 A PRO 242 n 242 PRO 242 A SER 243 n 243 SER 243 A LYS 244 n 244 LYS 244 A ASN 245 n 245 ASN 245 A ASP 246 n 246 ASP 246 A GLU 247 n 247 GLU 247 A LYS 248 n 248 LYS 248 A GLU 249 n 249 GLU 249 A TYR 250 n 250 TYR 250 A PRO 251 n 251 PRO 251 A HIS 252 n 252 HIS 252 A ARG 253 n 253 ARG 253 A ARG 254 n 254 ARG 254 A ILE 255 n 255 ILE 255 A ASP 256 n 256 ASP 256 A ILE 257 n 257 ILE 257 A ARG 258 n 258 ARG 258 A LEU 259 n 259 LEU 259 A ILE 260 n 260 ILE 260 A PRO 261 n 261 PRO 261 A LYS 262 n 262 LYS 262 A ASP 263 n 263 ASP 263 A GLN 264 n 264 GLN 264 A TYR 265 n 265 TYR 265 A TYR 266 n 266 TYR 266 A CYS 267 n 267 CYS 267 A GLY 268 n 268 GLY 268 A VAL 269 n 269 VAL 269 A LEU 270 n 270 LEU 270 A TYR 271 n 271 TYR 271 A PHE 272 n 272 PHE 272 A THR 273 n 273 THR 273 A GLY 274 n 274 GLY 274 A SER 275 n 275 SER 275 A ASP 276 n 276 ASP 276 A ILE 277 n 277 ILE 277 A PHE 278 n 278 PHE 278 A ASN 279 n 279 ASN 279 A LYS 280 n 280 LYS 280 A ASN 281 n 281 ASN 281 A MET 282 n 282 MET 282 A ARG 283 n 283 ARG 283 A ALA 284 n 284 ALA 284 A HIS 285 n 285 HIS 285 A ALA 286 n 286 ALA 286 A LEU 287 n 287 LEU 287 A GLU 288 n 288 GLU 288 A LYS 289 n 289 LYS 289 A GLY 290 n 290 GLY 290 A PHE 291 n 291 PHE 291 A THR 292 n 292 THR 292 A ILE 293 n 293 ILE 293 A ASN 294 n 294 ASN 294 A GLU 295 n 295 GLU 295 A TYR 296 n 296 TYR 296 A THR 297 n 297 THR 297 A ILE 298 n 298 ILE 298 A ARG 299 n 299 ARG 299 A PRO 300 n 300 PRO 300 A LEU 301 n 301 LEU 301 A GLY 302 n 302 GLY 302 A VAL 303 n 303 VAL 303 A THR 304 n 304 THR 304 A GLY 305 n 305 GLY 305 A VAL 306 n 306 VAL 306 A ALA 307 n 307 ALA 307 A GLY 308 n 308 GLY 308 A GLU 309 n 309 GLU 309 A PRO 310 n 310 PRO 310 A LEU 311 n 311 LEU 311 A PRO 312 n 312 PRO 312 A VAL 313 n 313 VAL 313 A ASP 314 n 314 ASP 314 A SER 315 n 315 SER 315 A GLU 316 n 316 GLU 316 A LYS 317 n 317 LYS 317 A ASP 318 n 318 ASP 318 A ILE 319 n 319 ILE 319 A PHE 320 n 320 PHE 320 A ASP 321 n 321 ASP 321 A TYR 322 n 322 TYR 322 A ILE 323 n 323 ILE 323 A GLN 324 n 324 GLN 324 A TRP 325 n 325 TRP 325 A LYS 326 n 326 LYS 326 A TYR 327 n 327 TYR 327 A ARG 328 n 328 ARG 328 A GLU 329 n 329 GLU 329 A PRO 330 n 330 PRO 330 A LYS 331 n 331 LYS 331 A ASP 332 n 332 ASP 332 A ARG 333 n 333 ARG 333 A SER 334 n 334 SER 334 A GLU 335 n 335 GLU 335 A author_and_software_defined_assembly PISA 4 tetrameric none 5430 -68 19850 P DG 9 B OP1 DG 9 1_555 A NA 403 G NA NA 1_555 P HOH 102 K O HOH 1_555 92.9 P DG 9 B OP1 DG 9 1_555 A NA 403 G NA NA 1_555 P HOH 110 K O HOH 1_555 84.3 P HOH 102 K O HOH 1_555 A NA 403 G NA NA 1_555 P HOH 110 K O HOH 1_555 81.7 P DG 9 B OP1 DG 9 1_555 A NA 403 G NA NA 1_555 A THR 101 D O THR 101 1_555 163.3 P HOH 102 K O HOH 1_555 A NA 403 G NA NA 1_555 A THR 101 D O THR 101 1_555 72.1 P HOH 110 K O HOH 1_555 A NA 403 G NA NA 1_555 A THR 101 D O THR 101 1_555 86.3 P DG 9 B OP1 DG 9 1_555 A NA 403 G NA NA 1_555 A VAL 103 D O VAL 103 1_555 98.3 P HOH 102 K O HOH 1_555 A NA 403 G NA NA 1_555 A VAL 103 D O VAL 103 1_555 168.6 P HOH 110 K O HOH 1_555 A NA 403 G NA NA 1_555 A VAL 103 D O VAL 103 1_555 97.2 A THR 101 D O THR 101 1_555 A NA 403 G NA NA 1_555 A VAL 103 D O VAL 103 1_555 96.5 P DG 9 B OP1 DG 9 1_555 A NA 403 G NA NA 1_555 A ILE 106 D O ILE 106 1_555 95.0 P HOH 102 K O HOH 1_555 A NA 403 G NA NA 1_555 A ILE 106 D O ILE 106 1_555 93.6 P HOH 110 K O HOH 1_555 A NA 403 G NA NA 1_555 A ILE 106 D O ILE 106 1_555 175.2 A THR 101 D O THR 101 1_555 A NA 403 G NA NA 1_555 A ILE 106 D O ILE 106 1_555 93.2 A VAL 103 D O VAL 103 1_555 A NA 403 G NA NA 1_555 A ILE 106 D O ILE 106 1_555 87.6 D DC 3 C OP1 DC 3 1_555 A NA 404 H NA NA 1_555 D HOH 102 L O HOH 1_555 84.3 D DC 3 C OP1 DC 3 1_555 A NA 404 H NA NA 1_555 A LYS 60 D O LYS 60 1_555 170.7 D HOH 102 L O HOH 1_555 A NA 404 H NA NA 1_555 A LYS 60 D O LYS 60 1_555 94.7 D DC 3 C OP1 DC 3 1_555 A NA 404 H NA NA 1_555 A LEU 62 D O LEU 62 1_555 95.8 D HOH 102 L O HOH 1_555 A NA 404 H NA NA 1_555 A LEU 62 D O LEU 62 1_555 168.5 A LYS 60 D O LYS 60 1_555 A NA 404 H NA NA 1_555 A LEU 62 D O LEU 62 1_555 83.3 D DC 3 C OP1 DC 3 1_555 A NA 404 H NA NA 1_555 A VAL 65 D O VAL 65 1_555 105.7 D HOH 102 L O HOH 1_555 A NA 404 H NA NA 1_555 A VAL 65 D O VAL 65 1_555 96.8 A LYS 60 D O LYS 60 1_555 A NA 404 H NA NA 1_555 A VAL 65 D O VAL 65 1_555 83.6 A LEU 62 D O LEU 62 1_555 A NA 404 H NA NA 1_555 A VAL 65 D O VAL 65 1_555 94.3 D DC 3 C OP1 DC 3 1_555 A NA 404 H NA NA 1_555 A HOH 571 M O HOH 1_555 93.7 D HOH 102 L O HOH 1_555 A NA 404 H NA NA 1_555 A HOH 571 M O HOH 1_555 94.3 A LYS 60 D O LYS 60 1_555 A NA 404 H NA NA 1_555 A HOH 571 M O HOH 1_555 77.1 A LEU 62 D O LEU 62 1_555 A NA 404 H NA NA 1_555 A HOH 571 M O HOH 1_555 74.1 A VAL 65 D O VAL 65 1_555 A NA 404 H NA NA 1_555 A HOH 571 M O HOH 1_555 158.4 A ASP 190 D OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A ASP 192 D OD2 ASP 192 1_555 86.8 A ASP 190 D OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1A FCJ 1_555 100.3 A ASP 192 D OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1A FCJ 1_555 88.5 A ASP 190 D OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1B FCJ 1_555 175.4 A ASP 192 D OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1B FCJ 1_555 89.5 A FCJ 401 E O1A FCJ 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1B FCJ 1_555 82.3 A ASP 190 D OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1G FCJ 1_555 88.4 A ASP 192 D OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1G FCJ 1_555 167.3 A FCJ 401 E O1A FCJ 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1G FCJ 1_555 104.0 A FCJ 401 E O1B FCJ 1_555 A MG 402 F MG MG 1_555 A FCJ 401 E O1G FCJ 1_555 94.6 A ASP 190 D OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A HOH 557 M O HOH 1_555 81.8 A ASP 192 D OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A HOH 557 M O HOH 1_555 79.6 A FCJ 401 E O1A FCJ 1_555 A MG 402 F MG MG 1_555 A HOH 557 M O HOH 1_555 167.8 A FCJ 401 E O1B FCJ 1_555 A MG 402 F MG MG 1_555 A HOH 557 M O HOH 1_555 94.8 A FCJ 401 E O1G FCJ 1_555 A MG 402 F MG MG 1_555 A HOH 557 M O HOH 1_555 88.1 A ASP 190 D OD1 ASP 190 1_555 A NA 405 I NA NA 1_555 A ASP 190 D OD2 ASP 190 1_555 45.4 A ASP 190 D OD1 ASP 190 1_555 A NA 405 I NA NA 1_555 A ASP 192 D OD1 ASP 192 1_555 78.8 A ASP 190 D OD2 ASP 190 1_555 A NA 405 I NA NA 1_555 A ASP 192 D OD1 ASP 192 1_555 124.0 A ASP 190 D OD1 ASP 190 1_555 A NA 405 I NA NA 1_555 A ASP 256 D OD2 ASP 256 1_555 156.7 A ASP 190 D OD2 ASP 190 1_555 A NA 405 I NA NA 1_555 A ASP 256 D OD2 ASP 256 1_555 127.2 A ASP 192 D OD1 ASP 192 1_555 A NA 405 I NA NA 1_555 A ASP 256 D OD2 ASP 256 1_555 105.3 A ASP 190 D OD1 ASP 190 1_555 A NA 405 I NA NA 1_555 A FCJ 401 E O1A FCJ 1_555 59.0 A ASP 190 D OD2 ASP 190 1_555 A NA 405 I NA NA 1_555 A FCJ 401 E O1A FCJ 1_555 71.3 A ASP 192 D OD1 ASP 192 1_555 A NA 405 I NA NA 1_555 A FCJ 401 E O1A FCJ 1_555 77.3 A ASP 256 D OD2 ASP 256 1_555 A NA 405 I NA NA 1_555 A FCJ 401 E O1A FCJ 1_555 144.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 150 D N ILE 150 A O SER 188 D O SER 188 A N THR 176 D N THR 176 A O LEU 194 D O LEU 194 A N LEU 195 D N LEU 195 A O ARG 258 D O ARG 258 A O ARG 253 D O ARG 253 A N CYS 239 D N CYS 239 A O MET 236 D O MET 236 A N LEU 228 D N LEU 228 A N THR 292 D N THR 292 A O ARG 299 D O ARG 299 A N GLY 302 D N GLY 302 A O VAL 306 D O VAL 306 1 A MET 1 D MET 1 1 Y 1 A SER 2 D SER 2 1 Y 1 A LYS 3 D LYS 3 1 Y 1 A ARG 4 D ARG 4 1 Y 1 A LYS 5 D LYS 5 1 Y 1 A ALA 6 D ALA 6 1 Y 1 A PRO 7 D PRO 7 1 Y 1 A GLN 8 D GLN 8 1 Y 1 A GLU 9 D GLU 9 1 Y 1 A A NE2 O GLN HOH 207 501 1.95 1 T T O6 O DG HOH 3 101 1.97 1 A A O O HOH HOH 589 669 2.04 1 A A O O HOH HOH 535 686 2.10 1 T T O O HOH HOH 118 125 2.14 1 A A THR LEU 10 11 136.71 1 T T O3' C3' DC DC 8 8 -0.038 0.006 1.419 1.381 N 1 D D P OP3 DG DG 1 1 -0.125 0.012 1.607 1.482 N 1 A A O O HOH HOH 629 681 1.88 1_555 1_656 1 A LEU 11 69.38 -151.70 1 A ASN 12 -108.45 51.91 1 A PRO 50 -83.21 31.82 1 A CYS 178 -114.90 -140.28 1 A ASN 245 -31.44 119.48 1 A ASP 246 71.65 -4.11 1 A ASN 294 -127.31 -164.19 70.070 29.8107 12.230 0.2318 0.1778 0.1827 1.9820 31.6600 1999 22126 9.0300 76.1900 0.2500 1 THROUGHOUT 1.350 MOLECULAR REPLACEMENT 27.3500 0.9000 1.1100 2FMS 1.9820 31.6600 231 3508 22.19 33.41 34 629 2614 357 0.009 3398 1.089 4710 0.043 514 0.005 496 21.340 1333 0.3385 0.0000 0.2273 2.0314 49 495 544 14 26.0000 0.3156 0.0000 0.2236 2.0863 66 661 727 14 35.0000 0.3039 0.0000 0.2198 2.1477 80 799 879 14 42.0000 0.2789 0.0000 0.2132 2.2170 98 997 1095 14 54.0000 0.2504 0.0000 0.2167 2.2962 121 1208 1329 14 64.0000 0.2551 0.0000 0.2216 2.3881 136 1374 1510 14 73.0000 0.2605 0.0000 0.2205 2.4968 153 1535 1688 14 82.0000 0.2729 0.0000 0.2198 2.6284 172 1728 1900 14 92.0000 0.2740 0.0000 0.2151 2.7929 182 1845 2027 14 98.0000 0.2627 0.0000 0.2109 3.0084 185 1869 2054 14 100.0000 0.2727 0.0000 0.1946 3.3109 188 1895 2083 14 100.0000 0.2360 0.0000 0.1617 3.7893 187 1877 2064 14 100.0000 0.1766 0.0000 0.1393 4.7715 189 1908 2097 14 100.0000 0.1825 0.0000 0.1390 31.6639 193 1936 2129 14 100.0000 1.980 50.000 6CR5 22149 0.074 1.091 1 9.600 72086 3.300 76.400 0.352 1.980 2.010 379 0.949 1 2.100 26.300 0.383 2.010 2.050 464 0.860 1 2.400 32.500 0.359 2.050 2.090 524 0.998 1 2.400 36.000 0.289 2.090 2.130 611 0.951 1 2.500 42.200 0.264 2.130 2.180 724 0.867 1 2.500 50.200 0.262 2.180 2.230 815 0.951 1 2.600 56.500 0.254 2.230 2.290 946 0.944 1 2.600 65.200 0.234 2.290 2.350 1008 0.942 1 2.700 70.400 0.217 2.350 2.420 1147 1.004 1 2.800 78.000 0.207 2.420 2.490 1178 0.963 1 2.900 83.300 0.187 2.490 2.580 1301 0.976 1 2.900 90.600 0.179 2.580 2.690 1400 1.007 1 3.200 95.900 0.167 2.690 2.810 1431 0.999 1 3.500 98.500 0.140 2.810 2.960 1444 1.017 1 3.700 99.400 0.114 2.960 3.140 1457 1.025 1 3.800 99.900 0.079 3.140 3.390 1440 1.247 1 3.800 99.900 0.063 3.390 3.730 1470 1.566 1 3.800 99.900 0.047 3.730 4.260 1459 1.258 1 3.800 99.900 0.040 4.260 5.370 1456 1.041 1 3.800 100.000 0.036 5.370 50.000 1495 1.119 1 3.700 99.600 data reduction HKL-2000 data scaling HKL-2000 refinement PHENIX 1.9_1692 data extraction PDB_EXTRACT 3.24 phasing PHENIX N Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CH2-beta, gamma dATP analogue 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N 7 N N 7 N N 8 N N 8 N N 8 N N 8 N N A ASN 12 D ASN 12 HELX_P A VAL 29 D VAL 29 1 AA1 18 A ALA 32 D ALA 32 HELX_P A TYR 49 D TYR 49 1 AA2 18 A SER 55 D SER 55 HELX_P A LYS 61 D LYS 61 1 AA3 7 A GLY 66 D GLY 66 HELX_P A GLY 80 D GLY 80 1 AA4 15 A LEU 82 D LEU 82 HELX_P A ASP 91 D ASP 91 1 AA5 10 A ASP 91 D ASP 91 HELX_P A THR 101 D THR 101 1 AA6 11 A GLY 107 D GLY 107 HELX_P A GLU 117 D GLU 117 1 AA7 11 A THR 121 D THR 121 HELX_P A ASN 128 D ASN 128 1 AA8 8 A GLU 129 D GLU 129 HELX_P A LEU 132 D LEU 132 5 AA9 4 A ASN 133 D ASN 133 HELX_P A TYR 142 D TYR 142 1 AB1 10 A TYR 142 D TYR 142 HELX_P A LYS 148 D LYS 148 1 AB2 7 A ARG 152 D ARG 152 HELX_P A ASP 170 D ASP 170 1 AB3 19 A CYS 178 D CYS 178 HELX_P A ARG 183 D ARG 183 1 AB4 6 A LYS 209 D LYS 209 HELX_P A VAL 221 D VAL 221 1 AB5 13 A PRO 261 D PRO 261 HELX_P A ASP 263 D ASP 263 5 AB6 3 A GLN 264 D GLN 264 HELX_P A GLY 274 D GLY 274 1 AB7 11 A SER 275 D SER 275 HELX_P A LYS 289 D LYS 289 1 AB8 15 A SER 315 D SER 315 HELX_P A ILE 323 D ILE 323 1 AB9 9 A GLU 329 D GLU 329 HELX_P A ARG 333 D ARG 333 5 AC1 5 covale 1.600 both P DG 9 B O3' DG 9 1_555 P DOC 10 B P DOC 10 1_555 metalc 2.270 P DG 9 B OP1 DG 9 1_555 A NA 403 G NA NA 1_555 metalc 2.509 P HOH 102 K O HOH 1_555 A NA 403 G NA NA 1_555 metalc 2.951 P HOH 110 K O HOH 1_555 A NA 403 G NA NA 1_555 metalc 2.415 D DC 3 C OP1 DC 3 1_555 A NA 404 H NA NA 1_555 metalc 2.696 D HOH 102 L O HOH 1_555 A NA 404 H NA NA 1_555 metalc 2.615 A LYS 60 D O LYS 60 1_555 A NA 404 H NA NA 1_555 metalc 2.468 A LEU 62 D O LEU 62 1_555 A NA 404 H NA NA 1_555 metalc 2.316 A VAL 65 D O VAL 65 1_555 A NA 404 H NA NA 1_555 metalc 2.421 A THR 101 D O THR 101 1_555 A NA 403 G NA NA 1_555 metalc 2.529 A VAL 103 D O VAL 103 1_555 A NA 403 G NA NA 1_555 metalc 2.324 A ILE 106 D O ILE 106 1_555 A NA 403 G NA NA 1_555 metalc 2.010 A ASP 190 D OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 metalc 3.098 A ASP 190 D OD1 ASP 190 1_555 A NA 405 I NA NA 1_555 metalc 2.139 A ASP 190 D OD2 ASP 190 1_555 A NA 405 I NA NA 1_555 metalc 2.256 A ASP 192 D OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 metalc 2.178 A ASP 192 D OD1 ASP 192 1_555 A NA 405 I NA NA 1_555 metalc 2.320 A ASP 256 D OD2 ASP 256 1_555 A NA 405 I NA NA 1_555 metalc 1.952 A FCJ 401 E O1A FCJ 1_555 A MG 402 F MG MG 1_555 metalc 1.911 A FCJ 401 E O1B FCJ 1_555 A MG 402 F MG MG 1_555 metalc 2.099 A FCJ 401 E O1G FCJ 1_555 A MG 402 F MG MG 1_555 metalc 3.076 A FCJ 401 E O1A FCJ 1_555 A NA 405 I NA NA 1_555 metalc 2.620 A MG 402 F MG MG 1_555 A HOH 557 M O HOH 1_555 metalc 2.906 A NA 404 H NA NA 1_555 A HOH 571 M O HOH 1_555 hydrog WATSON-CRICK T DC 1 A N3 DC 1 1_555 D DG 5 C N1 DG 5 1_555 hydrog WATSON-CRICK T DC 1 A N4 DC 1 1_555 D DG 5 C O6 DG 5 1_555 hydrog WATSON-CRICK T DC 1 A O2 DC 1 1_555 D DG 5 C N2 DG 5 1_555 hydrog WATSON-CRICK T DC 2 A N3 DC 2 1_555 D DG 4 C N1 DG 4 1_555 hydrog WATSON-CRICK T DC 2 A N4 DC 2 1_555 D DG 4 C O6 DG 4 1_555 hydrog WATSON-CRICK T DC 2 A O2 DC 2 1_555 D DG 4 C N2 DG 4 1_555 hydrog WATSON-CRICK T DG 3 A N1 DG 3 1_555 D DC 3 C N3 DC 3 1_555 hydrog WATSON-CRICK T DG 3 A N2 DG 3 1_555 D DC 3 C O2 DC 3 1_555 hydrog WATSON-CRICK T DG 3 A O6 DG 3 1_555 D DC 3 C N4 DC 3 1_555 hydrog WATSON-CRICK T DA 4 A N1 DA 4 1_555 D DT 2 C N3 DT 2 1_555 hydrog WATSON-CRICK T DA 4 A N6 DA 4 1_555 D DT 2 C O4 DT 2 1_555 hydrog WATSON-CRICK T DC 5 A N3 DC 5 1_555 D DG 1 C N1 DG 1 1_555 hydrog WATSON-CRICK T DC 5 A N4 DC 5 1_555 D DG 1 C O6 DG 1 1_555 hydrog WATSON-CRICK T DC 5 A O2 DC 5 1_555 D DG 1 C N2 DG 1 1_555 hydrog WATSON-CRICK T DG 7 A N1 DG 7 1_555 P DOC 10 B N3 DOC 10 1_555 hydrog WATSON-CRICK T DG 7 A N2 DG 7 1_555 P DOC 10 B O2 DOC 10 1_555 hydrog WATSON-CRICK T DG 7 A O6 DG 7 1_555 P DOC 10 B N4 DOC 10 1_555 hydrog WATSON-CRICK T DC 8 A N3 DC 8 1_555 P DG 9 B N1 DG 9 1_555 hydrog WATSON-CRICK T DC 8 A N4 DC 8 1_555 P DG 9 B O6 DG 9 1_555 hydrog WATSON-CRICK T DC 8 A O2 DC 8 1_555 P DG 9 B N2 DG 9 1_555 hydrog WATSON-CRICK T DG 9 A N1 DG 9 1_555 P DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK T DG 9 A N2 DG 9 1_555 P DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK T DG 9 A O6 DG 9 1_555 P DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK T DC 10 A N3 DC 10 1_555 P DG 7 B N1 DG 7 1_555 hydrog WATSON-CRICK T DC 10 A N4 DC 10 1_555 P DG 7 B O6 DG 7 1_555 hydrog WATSON-CRICK T DC 10 A O2 DC 10 1_555 P DG 7 B N2 DG 7 1_555 hydrog WATSON-CRICK T DA 11 A N1 DA 11 1_555 P DT 6 B N3 DT 6 1_555 hydrog WATSON-CRICK T DA 11 A N6 DA 11 1_555 P DT 6 B O4 DT 6 1_555 hydrog WATSON-CRICK T DT 12 A N3 DT 12 1_555 P DA 5 B N1 DA 5 1_555 hydrog WATSON-CRICK T DT 12 A O4 DT 12 1_555 P DA 5 B N6 DA 5 1_555 hydrog WATSON-CRICK T DC 13 A N3 DC 13 1_555 P DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK T DC 13 A N4 DC 13 1_555 P DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK T DC 13 A O2 DC 13 1_555 P DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK T DA 14 A N1 DA 14 1_555 P DT 3 B N3 DT 3 1_555 hydrog WATSON-CRICK T DA 14 A N6 DA 14 1_555 P DT 3 B O4 DT 3 1_555 hydrog WATSON-CRICK T DG 15 A N1 DG 15 1_555 P DC 2 B N3 DC 2 1_555 hydrog WATSON-CRICK T DG 15 A N2 DG 15 1_555 P DC 2 B O2 DC 2 1_555 hydrog WATSON-CRICK T DG 15 A O6 DG 15 1_555 P DC 2 B N4 DC 2 1_555 hydrog WATSON-CRICK T DC 16 A N3 DC 16 1_555 P DG 1 B N1 DG 1 1_555 hydrog WATSON-CRICK T DC 16 A N4 DC 16 1_555 P DG 1 B O6 DG 1 1_555 hydrog WATSON-CRICK T DC 16 A O2 DC 16 1_555 P DG 1 B N2 DG 1 1_555 TRANSFERASE/DNA Conformational Change, enzyme mechanism, LFER, Acidity modification, TRANSFERASE-DNA complex A GLY 274 D GLY 274 1 A SER 275 D SER 275 4.67 6CR5 PDB 1 1 6CR5 6CR5 PDB 2 1 6CR5 6CR5 PDB 3 1 6CR5 DPOLB_HUMAN UNP 4 1 P06746 MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE 1 16 6CR5 1 16 6CR5 T 1 1 16 1 10 6CR5 1 10 6CR5 P 2 1 10 1 5 6CR5 1 5 6CR5 D 3 1 5 1 335 6CR5 1 335 P06746 A 4 1 335 2 5 3 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 150 D ILE 150 A PRO 151 D PRO 151 A SER 187 D SER 187 A SER 188 D SER 188 A ILE 174 D ILE 174 A VAL 177 D VAL 177 A MET 191 D MET 191 A THR 196 D THR 196 A ARG 253 D ARG 253 A LEU 259 D LEU 259 A LYS 234 D LYS 234 A CYS 239 D CYS 239 A ILE 224 D ILE 224 A LYS 230 D LYS 230 A PHE 291 D PHE 291 A ILE 293 D ILE 293 A ILE 298 D ILE 298 A GLY 302 D GLY 302 A VAL 306 D VAL 306 A ALA 307 D ALA 307 binding site for residue FCJ A 401 A FCJ 401 Software 23 binding site for residue MG A 402 A MG 402 Software 4 binding site for residue NA A 403 A NA 403 Software 6 binding site for residue NA A 404 A NA 404 Software 6 binding site for residue NA A 405 A NA 405 Software 5 A ARG 149 D ARG 149 23 1_555 A GLY 179 D GLY 179 23 1_555 A SER 180 D SER 180 23 1_555 A ARG 183 D ARG 183 23 1_555 A SER 188 D SER 188 23 1_555 A GLY 189 D GLY 189 23 1_555 A ASP 190 D ASP 190 23 1_555 A ASP 192 D ASP 192 23 1_555 A TYR 271 D TYR 271 23 1_555 A PHE 272 D PHE 272 23 1_555 A THR 273 D THR 273 23 1_555 A GLY 274 D GLY 274 23 1_555 A ASP 276 D ASP 276 23 1_555 A ASN 279 D ASN 279 23 1_555 A MG 402 F MG 23 1_555 A NA 405 I NA 23 1_555 A HOH 537 M HOH 23 1_555 A HOH 556 M HOH 23 1_555 A HOH 624 M HOH 23 1_555 A HOH 627 M HOH 23 1_555 P DOC 10 B DOC 10 23 1_555 T DT 6 A DT 6 23 1_555 T DG 7 A DG 7 23 1_555 A ASP 190 D ASP 190 4 1_555 A ASP 192 D ASP 192 4 1_555 A FCJ 401 E FCJ 4 1_555 A HOH 557 M HOH 4 1_555 A THR 101 D THR 101 6 1_555 A VAL 103 D VAL 103 6 1_555 A ILE 106 D ILE 106 6 1_555 P DG 9 B DG 9 6 1_555 P HOH 102 K HOH 6 1_555 P HOH 110 K HOH 6 1_555 A LYS 60 D LYS 60 6 1_555 A LEU 62 D LEU 62 6 1_555 A VAL 65 D VAL 65 6 1_555 A HOH 571 M HOH 6 1_555 D DC 3 C DC 3 6 1_555 D HOH 102 L HOH 6 1_555 A ASP 190 D ASP 190 5 1_555 A ASP 192 D ASP 192 5 1_555 A ASP 256 D ASP 256 5 1_555 A FCJ 401 E FCJ 5 1_555 P DOC 10 B DOC 10 5 1_555 4 P 1 21 1