0.027091 -0.013941 -0.000943 -0.000000 0.028105 -0.002018 0.000000 -0.000000 0.009492 0.000000 0.000000 0.000000 Lei, M. Tempel, W. Arrowsmith, C.H. Bountra, C. Edwards, A.M. Min, J. Structural Genomics Consortium (SGC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 84.480 85.910 62.770 36.912 40.015 105.890 C10 H16 N3 O7 P 321.224 n 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking UNKNOWN ATOM OR ION non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 N C N 3 N N N 4 N C N 5 N C N 6 N C N 7 N C N 8 N O N 9 N N N 10 R C N 11 N C N 12 S C N 13 R C N 14 N O N 15 N O N 16 N C N 17 N O N 18 N P N 19 N O N 20 N O N 21 N O N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 R C N 113 N C N 114 N O N 115 N C N 116 N S N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N O N 126 N P N 127 N O N 128 N O N 129 N O N 130 N C N 131 R C N 132 N O N 133 S C N 134 N O N 135 N C N 136 R C Y 137 N N Y 138 N C Y 139 N N Y 140 N C Y 141 N C N 142 N N Y 143 N N Y 144 N C Y 145 N N Y 146 N C N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N O N 162 N P N 163 N O N 164 N O N 165 N O N 166 N C N 167 R C N 168 N O N 169 S C N 170 N O N 171 N C N 172 R C N 173 N N N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N C N 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C Y 207 N N Y 208 N C Y 209 N N Y 210 N C N 211 N C N 212 N O N 213 N N N 214 N C N 215 N N N 216 N N Y 217 N C N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N O N 233 N P N 234 N O N 235 N O N 236 N O N 237 N C N 238 R C N 239 N O N 240 S C N 241 N O N 242 N C N 243 R C N 244 N N N 245 N C N 246 N O N 247 N N N 248 N C N 249 N O N 250 N C N 251 N C N 252 N C N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C N 273 N C N 274 N C N 275 N O N 276 N N N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C N 293 N C N 294 N C N 295 N O N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 N C N 309 N C N 310 N O N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N O N 318 N H N 319 N H N 320 N N N 321 S C N 322 N C N 323 N O N 324 S C N 325 N C N 326 N C N 327 N C N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N N N 343 S C N 344 N C N 345 N O N 346 N C N 347 N C N 348 N C N 349 N C N 350 N O N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N N N 365 S C N 366 N C N 367 N O N 368 N C N 369 N C N 370 N C N 371 N C N 372 N N N 373 N O N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N N N 390 S C N 391 N C N 392 N O N 393 N C N 394 N C N 395 N S N 396 N C N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 S C N 411 N C N 412 N O N 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N C N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N C N 438 N C N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N N N 450 S C N 451 N C N 452 N O N 453 N C N 454 N O N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N N N 464 S C N 465 N C N 466 N O N 467 R C N 468 N O N 469 N C N 470 N O N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N N N 481 S C N 482 N C N 483 N O N 484 N C Y 485 N C Y 486 N C Y 487 N C Y 488 N N Y 489 N C Y 490 N C Y 491 N C Y 492 N C Y 493 N C N 494 N O N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N N N 508 S C N 509 N C N 510 N O N 511 N C Y 512 N C Y 513 N C Y 514 N C Y 515 N C Y 516 N C Y 517 N C N 518 N O N 519 N O N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N N N 532 S C N 533 N C N 534 N O N 535 N C N 536 N C N 537 N C N 538 N O N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N doub N 7 N sing N 8 N sing N 9 N sing N 10 N doub N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N doub N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N doub N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing Y 144 N sing Y 145 N sing Y 146 N doub N 147 N sing Y 148 N sing Y 149 N sing Y 150 N doub N 151 N sing Y 152 N doub N 153 N sing N 154 N sing Y 155 N sing Y 156 N doub N 157 N sing Y 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing Y 217 N sing Y 218 N sing Y 219 N doub N 220 N sing Y 221 N sing N 222 N sing Y 223 N doub N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N doub N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing Y 414 N doub Y 415 N sing Y 416 N sing N 417 N sing Y 418 N doub N 419 N sing Y 420 N doub N 421 N sing Y 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N doub N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N doub N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N doub N 479 N sing N 480 N sing N 481 N sing N 482 N sing Y 483 N doub Y 484 N sing Y 485 N sing N 486 N sing Y 487 N doub Y 488 N sing Y 489 N sing N 490 N sing Y 491 N sing Y 492 N doub N 493 N sing Y 494 N doub N 495 N sing Y 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N doub N 507 N sing N 508 N sing N 509 N sing N 510 N sing Y 511 N doub Y 512 N sing Y 513 N sing N 514 N sing Y 515 N doub N 516 N sing Y 517 N doub N 518 N sing Y 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N doub N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing US J. Biol. Chem. JBCHA3 0071 1083-351X 293 7344 7354 10.1074/jbc.RA118.001785 29567833 Structural basis for the ability of MBD domains to bind methyl-CG and TG sites in DNA. 2018 10.2210/pdb6c1u/pdb pdb_00006c1u 100 1 PIXEL 2017-09-17 DECTRIS PILATUS3 6M SINGLE WAVELENGTH M x-ray 1 0.97934 1.0 08ID-1 CLSI 0.97934 SYNCHROTRON CLSI BEAMLINE 08ID-1 8791.171 Methyl-CpG-binding domain protein 2 4 man polymer 3759.439 12-mer DNA 2 syn polymer 3582.360 12-mer DNA 2 syn polymer UNKNOWN ATOM OR ION 42 syn non-polymer 18.015 water 25 nat water Demethylase,DMTase,Methyl-CpG-binding protein MBD2 no no GATESGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQK GATESGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQK A,B,E,F polypeptide(L) no no (DC)(DG)(DG)(DA)(DG)(DT)(DG)(DT)(DG)(DG)(DG)(DC) CGGAGTGTGGGC C,G polydeoxyribonucleotide no yes (DG)(DC)(DC)(DC)(DA)(5CM)(DA)(DC)(DT)(DC)(DC)(DG) GCCCACACTCCG D,H polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 79 MBD2 9606 Homo sapiens 562 Escherichia coli BL21(DE3)-V2R-RIL Biological sequence pET28-MHL 1 2.80 56.08 0.330 VAPOR DIFFUSION, SITTING DROP 20% PEG-3350, 0.2 M potassium dihydrogen phosphate 291 -3.772 1 19 C 1 D 12 -1.814 C_DC1:DG12_D 1 2.085 0.328 0.188 -0.166 -3.666 1 19 C 2 D 11 -2.105 C_DG2:DC11_D 2 -2.630 -0.289 -0.016 -0.079 9.111 1 19 C 3 D 10 -0.596 C_DG3:DC10_D 3 -2.215 -0.384 0.316 0.069 6.638 1 20 C 4 D 9 -3.957 C_DA4:DT9_D 4 -19.588 -0.017 0.086 -0.120 0.583 1 19 C 5 D 8 2.680 C_DG5:DC8_D 5 -14.089 -0.194 0.142 -0.206 -1.049 1 20 C 6 D 7 -1.438 C_DT6:DA7_D 6 -4.325 0.037 -0.096 -0.099 -18.259 1 19 C 7 D 6 -1.066 C_DG7:5CM6_D 7 -6.297 -0.240 -0.472 -0.075 -5.286 1 20 C 8 D 5 -0.017 C_DT8:DA5_D 8 -7.807 0.173 0.412 -0.176 4.907 1 19 C 9 D 4 -1.843 C_DG9:DC4_D 9 -8.714 -0.268 0.071 -0.247 -1.700 1 19 C 10 D 3 -2.391 C_DG10:DC3_D 10 -7.555 -0.033 0.108 -0.116 8.623 1 19 C 11 D 2 -0.683 C_DG11:DC2_D 11 -10.069 -0.023 0.285 -0.002 7.897 1 19 C 12 D 1 -1.640 C_DC12:DG1_D 12 -5.270 0.143 -0.206 -0.067 -7.626 1 19 G 1 H 12 -3.258 G_DC1:DG12_H 13 0.434 0.205 0.219 -0.250 -3.616 1 19 G 2 H 11 -2.093 G_DG2:DC11_H 14 -6.972 -0.284 -0.072 -0.183 4.401 1 19 G 3 H 10 -1.180 G_DG3:DC10_H 15 -7.601 -0.322 0.267 -0.158 4.365 1 20 G 4 H 9 0.047 G_DA4:DT9_H 16 -19.607 0.105 0.114 -0.115 -2.050 1 19 G 5 H 8 -0.556 G_DG5:DC8_H 17 -15.625 -0.020 0.048 -0.214 -3.002 1 20 G 6 H 7 1.047 G_DT6:DA7_H 18 -3.276 0.025 -0.056 -0.177 -13.513 1 19 G 7 H 6 -0.363 G_DG7:5CM6_H 19 -5.373 -0.294 -0.286 -0.168 -4.942 1 20 G 8 H 5 -0.328 G_DT8:DA5_H 20 -7.739 -0.057 0.306 -0.060 3.359 1 19 G 9 H 4 -2.688 G_DG9:DC4_H 21 -9.057 -0.076 0.116 -0.180 1.582 1 19 G 10 H 3 -1.062 G_DG10:DC3_H 22 -8.186 -0.059 0.140 -0.109 7.574 1 19 G 11 H 2 -0.768 G_DG11:DC2_H 23 -10.880 0.126 0.075 0.016 5.383 1 19 G 12 H 1 2.891 G_DC12:DG1_H 24 -6.914 0.419 -0.033 -0.091 3.289 39.207 C C 1 2 -2.265 D D 12 11 3.307 -1.519 -0.206 0.103 CC_DC1DG2:DC11DG12_DD 1 1.740 -2.594 39.141 0.336 0.517 3.113 27.226 C C 2 3 8.881 D D 11 10 3.028 4.165 0.399 0.864 CC_DG2DG3:DC10DC11_DD 2 -0.645 1.376 26.904 0.850 -1.000 3.388 40.574 C C 3 4 -0.178 D D 10 9 3.440 -0.123 -1.140 1.668 CC_DG3DA4:DT9DC10_DD 3 1.666 -2.402 40.541 2.420 1.838 3.358 36.450 C C 4 5 7.538 D D 9 8 3.400 4.702 0.931 0.102 CC_DA4DG5:DC8DT9_DD 4 -1.069 1.713 36.140 -0.513 -1.642 3.263 34.957 C C 5 6 -2.064 D D 8 7 3.265 -1.239 -0.201 -0.319 CC_DG5DT6:DA7DC8_DD 5 1.539 -2.564 34.902 -0.345 0.567 3.683 43.983 C C 6 7 4.717 D D 7 6 3.712 3.529 0.107 -0.240 CC_DT6DG7:5CM6DA7_DD 6 0.021 -0.028 43.849 -0.697 -0.140 3.098 30.775 C C 7 8 -0.862 D D 6 5 3.035 -0.454 -0.597 -0.396 CC_DG7DT8:DA55CM6_DD 7 -6.862 13.034 30.015 -0.662 -0.150 3.031 26.530 C C 8 9 13.262 D D 5 4 3.032 6.024 -0.558 0.655 CC_DT8DG9:DC4DA5_DD 8 2.705 -5.954 25.709 -0.069 1.888 3.205 49.009 C C 9 10 -7.954 D D 4 3 3.445 -6.580 0.083 1.681 CC_DG9DG10:DC3DC4_DD 9 -0.187 0.226 48.592 2.534 -0.115 3.087 32.519 C C 10 11 8.868 D D 3 2 3.070 4.947 -0.002 0.350 CC_DG10DG11:DC2DC3_DD 10 -0.968 1.735 32.136 -0.193 -0.157 3.380 34.970 C C 11 12 -5.247 D D 2 1 3.304 -3.146 0.824 -0.409 CC_DG11DC12:DG1DC2_DD 11 2.751 -4.588 34.728 -0.195 -0.946 3.197 38.363 G G 1 2 -1.205 H H 12 11 3.214 -0.792 -0.192 0.079 GG_DC1DG2:DC11DG12_HH 12 2.098 -3.194 38.300 0.218 0.550 3.196 29.386 G G 2 3 9.701 H H 11 10 3.140 4.896 0.447 0.801 GG_DG2DG3:DC10DC11_HH 13 -1.829 3.624 28.928 0.553 -1.264 3.292 39.508 G G 3 4 -1.520 H H 10 9 3.348 -1.028 -1.044 1.715 GG_DG3DA4:DT9DC10_HH 14 0.471 -0.696 39.492 2.660 1.600 3.381 37.623 G G 4 5 8.996 H H 9 8 3.433 5.779 0.531 0.035 GG_DA4DG5:DC8DT9_HH 15 -1.281 1.994 37.171 -0.734 -0.998 3.366 34.602 G G 5 6 -7.864 H H 8 7 3.357 -4.664 0.077 -0.289 GG_DG5DT6:DA7DC8_HH 16 0.990 -1.670 34.282 0.256 0.028 3.434 43.506 G G 6 7 5.742 H H 7 6 3.472 4.250 0.185 -0.267 GG_DT6DG7:5CM6DA7_HH 17 0.430 -0.581 43.306 -0.794 -0.206 3.178 29.341 G G 7 8 0.898 H H 6 5 3.129 0.453 -0.618 -0.456 GG_DG7DT8:DA55CM6_HH 18 -4.256 8.430 29.034 -0.994 0.332 3.154 28.255 G G 8 9 11.772 H H 5 4 3.123 5.708 -0.581 0.573 GG_DT8DG9:DC4DA5_HH 19 0.964 -1.988 27.667 -0.112 1.407 3.258 46.836 G G 9 10 -5.664 H H 4 3 3.419 -4.496 0.101 1.622 GG_DG9DG10:DC3DC4_HH 20 -0.001 0.001 46.632 2.422 -0.127 3.212 33.159 G G 10 11 5.458 H H 3 2 3.193 3.111 -0.241 0.369 GG_DG10DG11:DC2DC3_HH 21 0.256 -0.450 33.016 0.133 0.465 3.345 34.828 G G 11 12 -2.881 H H 2 1 3.329 -1.724 1.083 -0.307 GG_DG11DC12:DG1DC2_HH 22 0.152 -0.255 34.786 -0.245 -1.786 Structural Genomics Consortium SGC citation citation_author citation chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Data collection Database references Data collection Database references Data collection Database references Refinement description 1 0 2018-02-14 1 1 2018-04-18 1 2 2018-05-23 1 3 2024-03-13 1 4 2024-04-03 _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _citation_author.name _citation.journal_volume _citation.page_first _citation.page_last _database_2.pdbx_DOI _database_2.pdbx_database_accession Y RCSB Y RCSB 2018-01-05 REL REL UNX UNKNOWN ATOM OR ION HOH water 32630 synthetic construct sample 1 12 32630 synthetic construct sample 1 12 rigid body refinement (refmac5/dimple) of a currently unpublished, isomorphous structure of a similar MBD2-DNA complex against current data. Other experimental model UNX 34 4 UNX UNX 301 A UNX 45 4 UNX UNX 302 A UNX 52 4 UNX UNX 303 A UNX 67 4 UNX UNX 304 A UNX 76 4 UNX UNX 305 A UNX 8 4 UNX UNX 301 B UNX 9 4 UNX UNX 302 B UNX 12 4 UNX UNX 303 B UNX 28 4 UNX UNX 304 B UNX 49 4 UNX UNX 305 B UNX 63 4 UNX UNX 306 B UNX 64 4 UNX UNX 307 B UNX 68 4 UNX UNX 308 B UNX 71 4 UNX UNX 309 B UNX 73 4 UNX UNX 310 B UNX 77 4 UNX UNX 311 B UNX 80 4 UNX UNX 312 B UNX 13 4 UNX UNX 101 C UNX 41 4 UNX UNX 102 C UNX 54 4 UNX UNX 103 C UNX 78 4 UNX UNX 104 C UNX 32 4 UNX UNX 101 D UNX 72 4 UNX UNX 102 D UNX 82 4 UNX UNX 103 D UNX 20 4 UNX UNX 301 E UNX 23 4 UNX UNX 302 E UNX 50 4 UNX UNX 303 E UNX 55 4 UNX UNX 304 E UNX 61 4 UNX UNX 305 E UNX 69 4 UNX UNX 306 E UNX 29 4 UNX UNX 301 F UNX 66 4 UNX UNX 302 F UNX 81 4 UNX UNX 303 F UNX 14 4 UNX UNX 101 G UNX 15 4 UNX UNX 102 G UNX 36 4 UNX UNX 103 G UNX 48 4 UNX UNX 104 G UNX 62 4 UNX UNX 105 G UNX 65 4 UNX UNX 106 G UNX 79 4 UNX UNX 107 G UNX 38 4 UNX UNX 101 H UNX 60 4 UNX UNX 102 H HOH 13 5 HOH HOH 401 A HOH 19 5 HOH HOH 402 A HOH 22 5 HOH HOH 403 A HOH 11 5 HOH HOH 404 A HOH 16 5 HOH HOH 401 B HOH 6 5 HOH HOH 201 C HOH 21 5 HOH HOH 202 C HOH 9 5 HOH HOH 203 C HOH 4 5 HOH HOH 204 C HOH 24 5 HOH HOH 201 D HOH 41 5 HOH HOH 202 D HOH 15 5 HOH HOH 401 E HOH 7 5 HOH HOH 402 E HOH 12 5 HOH HOH 403 E HOH 28 5 HOH HOH 401 F HOH 40 5 HOH HOH 402 F HOH 2 5 HOH HOH 403 F HOH 17 5 HOH HOH 201 G HOH 8 5 HOH HOH 202 G HOH 32 5 HOH HOH 203 G HOH 39 5 HOH HOH 204 G HOH 38 5 HOH HOH 201 H HOH 14 5 HOH HOH 202 H HOH 20 5 HOH HOH 203 H HOH 27 5 HOH HOH 204 H n 1 142 A n 2 143 A n 3 144 A n 4 145 A n 5 146 A GLY 147 n 6 GLY 147 A LYS 148 n 7 LYS 148 A ARG 149 n 8 ARG 149 A MET 150 n 9 MET 150 A ASP 151 n 10 ASP 151 A CYS 152 n 11 CYS 152 A PRO 153 n 12 PRO 153 A ALA 154 n 13 ALA 154 A LEU 155 n 14 LEU 155 A PRO 156 n 15 PRO 156 A PRO 157 n 16 PRO 157 A GLY 158 n 17 GLY 158 A TRP 159 n 18 TRP 159 A LYS 160 n 19 LYS 160 A LYS 161 n 20 LYS 161 A GLU 162 n 21 GLU 162 A GLU 163 n 22 GLU 163 A VAL 164 n 23 VAL 164 A ILE 165 n 24 ILE 165 A ARG 166 n 25 ARG 166 A LYS 167 n 26 LYS 167 A SER 168 n 27 SER 168 A GLY 169 n 28 GLY 169 A LEU 170 n 29 LEU 170 A SER 171 n 30 SER 171 A ALA 172 n 31 ALA 172 A GLY 173 n 32 GLY 173 A LYS 174 n 33 LYS 174 A SER 175 n 34 SER 175 A ASP 176 n 35 ASP 176 A VAL 177 n 36 VAL 177 A TYR 178 n 37 TYR 178 A TYR 179 n 38 TYR 179 A PHE 180 n 39 PHE 180 A SER 181 n 40 SER 181 A PRO 182 n 41 PRO 182 A SER 183 n 42 SER 183 A GLY 184 n 43 GLY 184 A LYS 185 n 44 LYS 185 A LYS 186 n 45 LYS 186 A PHE 187 n 46 PHE 187 A ARG 188 n 47 ARG 188 A SER 189 n 48 SER 189 A LYS 190 n 49 LYS 190 A PRO 191 n 50 PRO 191 A GLN 192 n 51 GLN 192 A LEU 193 n 52 LEU 193 A ALA 194 n 53 ALA 194 A ARG 195 n 54 ARG 195 A TYR 196 n 55 TYR 196 A LEU 197 n 56 LEU 197 A GLY 198 n 57 GLY 198 A ASN 199 n 58 ASN 199 A THR 200 n 59 THR 200 A VAL 201 n 60 VAL 201 A ASP 202 n 61 ASP 202 A LEU 203 n 62 LEU 203 A SER 204 n 63 SER 204 A SER 205 n 64 SER 205 A PHE 206 n 65 PHE 206 A ASP 207 n 66 ASP 207 A PHE 208 n 67 PHE 208 A ARG 209 n 68 ARG 209 A THR 210 n 69 THR 210 A GLY 211 n 70 GLY 211 A LYS 212 n 71 LYS 212 A MET 213 n 72 MET 213 A MET 214 n 73 MET 214 A n 74 215 A n 75 216 A n 76 217 A n 77 218 A n 78 219 A n 79 220 A n 1 142 B n 2 143 B n 3 144 B n 4 145 B n 5 146 B n 6 147 B LYS 148 n 7 LYS 148 B ARG 149 n 8 ARG 149 B MET 150 n 9 MET 150 B ASP 151 n 10 ASP 151 B CYS 152 n 11 CYS 152 B PRO 153 n 12 PRO 153 B ALA 154 n 13 ALA 154 B LEU 155 n 14 LEU 155 B PRO 156 n 15 PRO 156 B PRO 157 n 16 PRO 157 B GLY 158 n 17 GLY 158 B TRP 159 n 18 TRP 159 B LYS 160 n 19 LYS 160 B LYS 161 n 20 LYS 161 B GLU 162 n 21 GLU 162 B GLU 163 n 22 GLU 163 B VAL 164 n 23 VAL 164 B ILE 165 n 24 ILE 165 B ARG 166 n 25 ARG 166 B LYS 167 n 26 LYS 167 B SER 168 n 27 SER 168 B GLY 169 n 28 GLY 169 B LEU 170 n 29 LEU 170 B SER 171 n 30 SER 171 B ALA 172 n 31 ALA 172 B GLY 173 n 32 GLY 173 B LYS 174 n 33 LYS 174 B SER 175 n 34 SER 175 B ASP 176 n 35 ASP 176 B VAL 177 n 36 VAL 177 B TYR 178 n 37 TYR 178 B TYR 179 n 38 TYR 179 B PHE 180 n 39 PHE 180 B SER 181 n 40 SER 181 B PRO 182 n 41 PRO 182 B SER 183 n 42 SER 183 B GLY 184 n 43 GLY 184 B LYS 185 n 44 LYS 185 B LYS 186 n 45 LYS 186 B PHE 187 n 46 PHE 187 B ARG 188 n 47 ARG 188 B SER 189 n 48 SER 189 B LYS 190 n 49 LYS 190 B PRO 191 n 50 PRO 191 B GLN 192 n 51 GLN 192 B LEU 193 n 52 LEU 193 B ALA 194 n 53 ALA 194 B ARG 195 n 54 ARG 195 B TYR 196 n 55 TYR 196 B LEU 197 n 56 LEU 197 B GLY 198 n 57 GLY 198 B ASN 199 n 58 ASN 199 B THR 200 n 59 THR 200 B VAL 201 n 60 VAL 201 B ASP 202 n 61 ASP 202 B LEU 203 n 62 LEU 203 B SER 204 n 63 SER 204 B SER 205 n 64 SER 205 B PHE 206 n 65 PHE 206 B ASP 207 n 66 ASP 207 B PHE 208 n 67 PHE 208 B ARG 209 n 68 ARG 209 B THR 210 n 69 THR 210 B GLY 211 n 70 GLY 211 B LYS 212 n 71 LYS 212 B MET 213 n 72 MET 213 B MET 214 n 73 MET 214 B PRO 215 n 74 PRO 215 B n 75 216 B n 76 217 B n 77 218 B n 78 219 B n 79 220 B DC 1 n 1 DC 1 C DG 2 n 2 DG 2 C DG 3 n 3 DG 3 C DA 4 n 4 DA 4 C DG 5 n 5 DG 5 C DT 6 n 6 DT 6 C DG 7 n 7 DG 7 C DT 8 n 8 DT 8 C DG 9 n 9 DG 9 C DG 10 n 10 DG 10 C DG 11 n 11 DG 11 C DC 12 n 12 DC 12 C DG 1 n 1 DG 1 D DC 2 n 2 DC 2 D DC 3 n 3 DC 3 D DC 4 n 4 DC 4 D DA 5 n 5 DA 5 D 5CM 6 n 6 5CM 6 D DA 7 n 7 DA 7 D DC 8 n 8 DC 8 D DT 9 n 9 DT 9 D DC 10 n 10 DC 10 D DC 11 n 11 DC 11 D DG 12 n 12 DG 12 D n 1 142 E n 2 143 E n 3 144 E n 4 145 E n 5 146 E GLY 147 n 6 GLY 147 E LYS 148 n 7 LYS 148 E ARG 149 n 8 ARG 149 E MET 150 n 9 MET 150 E ASP 151 n 10 ASP 151 E CYS 152 n 11 CYS 152 E PRO 153 n 12 PRO 153 E ALA 154 n 13 ALA 154 E LEU 155 n 14 LEU 155 E PRO 156 n 15 PRO 156 E PRO 157 n 16 PRO 157 E GLY 158 n 17 GLY 158 E TRP 159 n 18 TRP 159 E LYS 160 n 19 LYS 160 E LYS 161 n 20 LYS 161 E GLU 162 n 21 GLU 162 E GLU 163 n 22 GLU 163 E VAL 164 n 23 VAL 164 E ILE 165 n 24 ILE 165 E ARG 166 n 25 ARG 166 E LYS 167 n 26 LYS 167 E SER 168 n 27 SER 168 E GLY 169 n 28 GLY 169 E LEU 170 n 29 LEU 170 E SER 171 n 30 SER 171 E ALA 172 n 31 ALA 172 E GLY 173 n 32 GLY 173 E LYS 174 n 33 LYS 174 E SER 175 n 34 SER 175 E ASP 176 n 35 ASP 176 E VAL 177 n 36 VAL 177 E TYR 178 n 37 TYR 178 E TYR 179 n 38 TYR 179 E PHE 180 n 39 PHE 180 E SER 181 n 40 SER 181 E PRO 182 n 41 PRO 182 E SER 183 n 42 SER 183 E GLY 184 n 43 GLY 184 E LYS 185 n 44 LYS 185 E LYS 186 n 45 LYS 186 E PHE 187 n 46 PHE 187 E ARG 188 n 47 ARG 188 E SER 189 n 48 SER 189 E LYS 190 n 49 LYS 190 E PRO 191 n 50 PRO 191 E GLN 192 n 51 GLN 192 E LEU 193 n 52 LEU 193 E ALA 194 n 53 ALA 194 E ARG 195 n 54 ARG 195 E TYR 196 n 55 TYR 196 E LEU 197 n 56 LEU 197 E GLY 198 n 57 GLY 198 E ASN 199 n 58 ASN 199 E THR 200 n 59 THR 200 E VAL 201 n 60 VAL 201 E ASP 202 n 61 ASP 202 E LEU 203 n 62 LEU 203 E SER 204 n 63 SER 204 E SER 205 n 64 SER 205 E PHE 206 n 65 PHE 206 E ASP 207 n 66 ASP 207 E PHE 208 n 67 PHE 208 E ARG 209 n 68 ARG 209 E THR 210 n 69 THR 210 E GLY 211 n 70 GLY 211 E LYS 212 n 71 LYS 212 E MET 213 n 72 MET 213 E MET 214 n 73 MET 214 E PRO 215 n 74 PRO 215 E n 75 216 E n 76 217 E n 77 218 E n 78 219 E n 79 220 E n 1 142 F n 2 143 F n 3 144 F n 4 145 F n 5 146 F GLY 147 n 6 GLY 147 F LYS 148 n 7 LYS 148 F ARG 149 n 8 ARG 149 F MET 150 n 9 MET 150 F ASP 151 n 10 ASP 151 F CYS 152 n 11 CYS 152 F PRO 153 n 12 PRO 153 F ALA 154 n 13 ALA 154 F LEU 155 n 14 LEU 155 F PRO 156 n 15 PRO 156 F PRO 157 n 16 PRO 157 F GLY 158 n 17 GLY 158 F TRP 159 n 18 TRP 159 F LYS 160 n 19 LYS 160 F LYS 161 n 20 LYS 161 F GLU 162 n 21 GLU 162 F GLU 163 n 22 GLU 163 F VAL 164 n 23 VAL 164 F ILE 165 n 24 ILE 165 F ARG 166 n 25 ARG 166 F LYS 167 n 26 LYS 167 F SER 168 n 27 SER 168 F GLY 169 n 28 GLY 169 F LEU 170 n 29 LEU 170 F SER 171 n 30 SER 171 F ALA 172 n 31 ALA 172 F GLY 173 n 32 GLY 173 F LYS 174 n 33 LYS 174 F SER 175 n 34 SER 175 F ASP 176 n 35 ASP 176 F VAL 177 n 36 VAL 177 F TYR 178 n 37 TYR 178 F TYR 179 n 38 TYR 179 F PHE 180 n 39 PHE 180 F SER 181 n 40 SER 181 F PRO 182 n 41 PRO 182 F SER 183 n 42 SER 183 F GLY 184 n 43 GLY 184 F LYS 185 n 44 LYS 185 F LYS 186 n 45 LYS 186 F PHE 187 n 46 PHE 187 F ARG 188 n 47 ARG 188 F SER 189 n 48 SER 189 F LYS 190 n 49 LYS 190 F PRO 191 n 50 PRO 191 F GLN 192 n 51 GLN 192 F LEU 193 n 52 LEU 193 F ALA 194 n 53 ALA 194 F ARG 195 n 54 ARG 195 F TYR 196 n 55 TYR 196 F LEU 197 n 56 LEU 197 F GLY 198 n 57 GLY 198 F ASN 199 n 58 ASN 199 F THR 200 n 59 THR 200 F VAL 201 n 60 VAL 201 F ASP 202 n 61 ASP 202 F LEU 203 n 62 LEU 203 F SER 204 n 63 SER 204 F SER 205 n 64 SER 205 F PHE 206 n 65 PHE 206 F ASP 207 n 66 ASP 207 F PHE 208 n 67 PHE 208 F ARG 209 n 68 ARG 209 F THR 210 n 69 THR 210 F GLY 211 n 70 GLY 211 F LYS 212 n 71 LYS 212 F MET 213 n 72 MET 213 F MET 214 n 73 MET 214 F PRO 215 n 74 PRO 215 F n 75 216 F n 76 217 F n 77 218 F n 78 219 F n 79 220 F DC 1 n 1 DC 1 G DG 2 n 2 DG 2 G DG 3 n 3 DG 3 G DA 4 n 4 DA 4 G DG 5 n 5 DG 5 G DT 6 n 6 DT 6 G DG 7 n 7 DG 7 G DT 8 n 8 DT 8 G DG 9 n 9 DG 9 G DG 10 n 10 DG 10 G DG 11 n 11 DG 11 G DC 12 n 12 DC 12 G DG 1 n 1 DG 1 H DC 2 n 2 DC 2 H DC 3 n 3 DC 3 H DC 4 n 4 DC 4 H DA 5 n 5 DA 5 H 5CM 6 n 6 5CM 6 H DA 7 n 7 DA 7 H DC 8 n 8 DC 8 H DT 9 n 9 DT 9 H DC 10 n 10 DC 10 H DC 11 n 11 DC 11 H DG 12 n 12 DG 12 H 2.7073 -1.1763 -0.0485 3.3979 1.4822 7.0130 -0.0229 -0.1635 -0.0016 0.1818 0.1297 -0.2299 -0.1974 0.2914 -0.1068 0.0696 -0.0896 0.0145 0.1923 -0.0391 0.0478 refined -27.7505 16.3216 -25.6641 X-RAY DIFFRACTION 3.3243 -1.1754 -3.8205 1.4553 0.2675 8.0106 0.1474 0.5741 -0.0071 -0.6020 -0.1880 0.1494 0.0964 -0.3861 0.0406 0.3816 -0.0498 -0.0511 0.3122 -0.0278 0.0897 refined -45.1539 8.4864 -55.0331 X-RAY DIFFRACTION 4.2443 4.3699 0.4410 7.3728 1.6833 1.6847 -0.0711 0.0178 0.2648 -0.4589 0.0221 0.2951 -0.3029 0.1228 0.0490 0.0838 -0.0459 0.0025 0.0787 -0.0174 0.0274 refined -34.9360 17.9478 -39.8557 X-RAY DIFFRACTION 3.5572 3.1904 0.3536 8.0237 0.9449 1.5917 0.0356 -0.0355 0.0434 -0.2222 -0.0817 -0.3429 -0.1087 0.0695 0.0461 0.0906 -0.0430 0.0309 0.0579 0.0186 0.0673 refined -33.6604 17.6424 -40.7069 X-RAY DIFFRACTION 3.3864 1.2771 0.7575 2.9333 1.1323 7.2430 -0.0967 0.2099 -0.0518 -0.2635 0.2198 -0.1259 0.1128 0.2159 -0.1232 0.0857 0.0631 0.0218 0.1716 -0.0365 0.0611 refined -46.2849 14.3515 -5.5360 X-RAY DIFFRACTION 2.4783 0.8814 0.7204 2.3374 1.5078 9.4358 0.1484 -0.5573 -0.0573 0.7506 -0.1010 0.0502 -0.1983 0.0976 -0.0474 0.3458 0.0137 0.0545 0.2809 -0.0020 0.1620 refined -64.8666 23.0714 23.8661 X-RAY DIFFRACTION 3.2346 -4.0727 -0.0725 7.0006 1.8479 2.5787 -0.1268 -0.0039 -0.2107 0.6031 0.0719 0.1346 0.2346 0.1347 0.0549 0.1742 0.0403 -0.0202 0.0598 0.0555 0.0953 refined -53.2773 12.6426 8.9417 X-RAY DIFFRACTION 4.0561 -4.0361 -0.3827 8.4543 1.4342 2.0953 0.0096 0.0448 -0.0740 0.2860 -0.0322 -0.2483 0.1434 0.1003 0.0226 0.0884 0.0517 0.0227 0.0414 0.0327 0.1179 refined -52.0080 13.0161 9.7083 X-RAY DIFFRACTION A 147 A 214 X-RAY DIFFRACTION 1 B 148 B 215 X-RAY DIFFRACTION 2 C 1 C 12 X-RAY DIFFRACTION 3 D 1 D 12 X-RAY DIFFRACTION 4 E 147 E 215 X-RAY DIFFRACTION 5 F 147 F 215 X-RAY DIFFRACTION 6 G 1 G 12 X-RAY DIFFRACTION 7 H 1 H 12 X-RAY DIFFRACTION 8 author_defined_assembly 4 tetrameric author_defined_assembly 4 tetrameric see PDB entry 2KY8 homology 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N MET 150 A N MET 9 A O LYS 161 A O LYS 20 A N LYS 160 A N LYS 19 A O PHE 180 A O PHE 39 A N TYR 179 A N TYR 38 A O PHE 187 A O PHE 46 A N ASP 207 A N ASP 66 A O LYS 212 A O LYS 71 B N MET 150 B N MET 9 B O LYS 161 B O LYS 20 B N GLU 162 B N GLU 21 B O TYR 178 B O TYR 37 B N TYR 179 B N TYR 38 B O PHE 187 B O PHE 46 B N ASP 207 B N ASP 66 B O LYS 212 B O LYS 71 E N MET 150 E N MET 9 E O LYS 161 E O LYS 20 E N LYS 160 E N LYS 19 E O PHE 180 E O PHE 39 E N TYR 179 E N TYR 38 E O PHE 187 E O PHE 46 F N MET 150 F N MET 9 F O LYS 161 F O LYS 20 F N VAL 164 F N VAL 23 F O ASP 176 F O ASP 35 F N TYR 179 F N TYR 38 F O PHE 187 F O PHE 46 1 A N GLY 147 A N GLY 6 1 Y 1 A CG LYS 148 A CG LYS 7 1 Y 1 A CD LYS 148 A CD LYS 7 1 Y 1 A CE LYS 148 A CE LYS 7 1 Y 1 A NZ LYS 148 A NZ LYS 7 1 Y 1 A NZ LYS 160 A NZ LYS 19 1 Y 1 A NZ LYS 161 A NZ LYS 20 1 Y 1 A CD LYS 167 A CD LYS 26 1 Y 1 A CE LYS 167 A CE LYS 26 1 Y 1 A NZ LYS 167 A NZ LYS 26 1 Y 1 A CD LYS 174 A CD LYS 33 1 Y 1 A CE LYS 174 A CE LYS 33 1 Y 1 A NZ LYS 174 A NZ LYS 33 1 Y 1 A OG SER 183 A OG SER 42 1 Y 1 A CD LYS 185 A CD LYS 44 1 Y 1 A CE LYS 185 A CE LYS 44 1 Y 1 A NZ LYS 185 A NZ LYS 44 1 Y 1 A CE LYS 212 A CE LYS 71 1 Y 1 A NZ LYS 212 A NZ LYS 71 1 Y 1 B N LYS 148 B N LYS 7 1 Y 1 B CB LYS 148 B CB LYS 7 1 Y 1 B CG LYS 148 B CG LYS 7 1 Y 1 B CD LYS 148 B CD LYS 7 1 Y 1 B CE LYS 148 B CE LYS 7 1 Y 1 B NZ LYS 148 B NZ LYS 7 1 Y 1 B CG MET 150 B CG MET 9 1 Y 1 B SD MET 150 B SD MET 9 1 Y 1 B CE MET 150 B CE MET 9 1 Y 1 B CG ASP 151 B CG ASP 10 1 Y 1 B OD1 ASP 151 B OD1 ASP 10 1 Y 1 B OD2 ASP 151 B OD2 ASP 10 1 Y 1 B CB PRO 153 B CB PRO 12 1 Y 1 B CG PRO 153 B CG PRO 12 1 Y 1 B CD PRO 153 B CD PRO 12 1 Y 1 B CB PRO 157 B CB PRO 16 1 Y 1 B CG PRO 157 B CG PRO 16 1 Y 1 B CD PRO 157 B CD PRO 16 1 Y 1 B CD LYS 160 B CD LYS 19 1 Y 1 B CE LYS 160 B CE LYS 19 1 Y 1 B NZ LYS 160 B NZ LYS 19 1 Y 1 B NZ LYS 161 B NZ LYS 20 1 Y 1 B CD LYS 167 B CD LYS 26 1 Y 1 B CE LYS 167 B CE LYS 26 1 Y 1 B NZ LYS 167 B NZ LYS 26 1 Y 1 B OG SER 183 B OG SER 42 1 Y 1 B CG LYS 185 B CG LYS 44 1 Y 1 B CD LYS 185 B CD LYS 44 1 Y 1 B CE LYS 185 B CE LYS 44 1 Y 1 B NZ LYS 185 B NZ LYS 44 1 Y 1 B NZ LYS 186 B NZ LYS 45 1 Y 1 B OD1 ASN 199 B OD1 ASN 58 1 Y 1 B ND2 ASN 199 B ND2 ASN 58 1 Y 1 B OG SER 204 B OG SER 63 1 Y 1 B OG SER 205 B OG SER 64 1 Y 1 B CD LYS 212 B CD LYS 71 1 Y 1 B CE LYS 212 B CE LYS 71 1 Y 1 B NZ LYS 212 B NZ LYS 71 1 Y 1 B CG MET 214 B CG MET 73 1 Y 1 B SD MET 214 B SD MET 73 1 Y 1 B CE MET 214 B CE MET 73 1 Y 1 E N GLY 147 E N GLY 6 1 Y 1 E CG LYS 148 E CG LYS 7 1 Y 1 E CD LYS 148 E CD LYS 7 1 Y 1 E CE LYS 148 E CE LYS 7 1 Y 1 E NZ LYS 148 E NZ LYS 7 1 Y 1 E NZ LYS 160 E NZ LYS 19 1 Y 1 E NZ LYS 161 E NZ LYS 20 1 Y 1 E CD LYS 167 E CD LYS 26 1 Y 1 E CE LYS 167 E CE LYS 26 1 Y 1 E NZ LYS 167 E NZ LYS 26 1 Y 1 E CG LEU 170 E CG LEU 29 1 Y 1 E CD1 LEU 170 E CD1 LEU 29 1 Y 1 E CD2 LEU 170 E CD2 LEU 29 1 Y 1 E CG LYS 174 E CG LYS 33 1 Y 1 E CD LYS 174 E CD LYS 33 1 Y 1 E CE LYS 174 E CE LYS 33 1 Y 1 E NZ LYS 174 E NZ LYS 33 1 Y 1 E OG SER 183 E OG SER 42 1 Y 1 E NZ LYS 185 E NZ LYS 44 1 Y 1 E CE LYS 212 E CE LYS 71 1 Y 1 E NZ LYS 212 E NZ LYS 71 1 Y 1 E C PRO 215 E C PRO 74 1 Y 1 E O PRO 215 E O PRO 74 1 Y 1 E CB PRO 215 E CB PRO 74 1 Y 1 E CG PRO 215 E CG PRO 74 1 Y 1 E CD PRO 215 E CD PRO 74 1 Y 1 F CG LYS 148 F CG LYS 7 1 Y 1 F CD LYS 148 F CD LYS 7 1 Y 1 F CE LYS 148 F CE LYS 7 1 Y 1 F NZ LYS 148 F NZ LYS 7 1 Y 1 F CG MET 150 F CG MET 9 1 Y 1 F SD MET 150 F SD MET 9 1 Y 1 F CE MET 150 F CE MET 9 1 Y 1 F CG ASP 151 F CG ASP 10 1 Y 1 F OD1 ASP 151 F OD1 ASP 10 1 Y 1 F OD2 ASP 151 F OD2 ASP 10 1 Y 1 F CE LYS 160 F CE LYS 19 1 Y 1 F NZ LYS 160 F NZ LYS 19 1 Y 1 F NZ LYS 161 F NZ LYS 20 1 Y 1 F OG SER 183 F OG SER 42 1 Y 1 F CG LYS 185 F CG LYS 44 1 Y 1 F CD LYS 185 F CD LYS 44 1 Y 1 F CE LYS 185 F CE LYS 44 1 Y 1 F NZ LYS 185 F NZ LYS 44 1 Y 1 F CG ARG 195 F CG ARG 54 1 Y 1 F CD ARG 195 F CD ARG 54 1 Y 1 F NE ARG 195 F NE ARG 54 1 Y 1 F CZ ARG 195 F CZ ARG 54 1 Y 1 F NH1 ARG 195 F NH1 ARG 54 1 Y 1 F NH2 ARG 195 F NH2 ARG 54 1 Y 1 F CG ASN 199 F CG ASN 58 1 Y 1 F OD1 ASN 199 F OD1 ASN 58 1 Y 1 F ND2 ASN 199 F ND2 ASN 58 1 Y 1 F OG1 THR 200 F OG1 THR 59 1 Y 1 F CG2 THR 200 F CG2 THR 59 1 Y 1 F CG1 VAL 201 F CG1 VAL 60 1 Y 1 F CG2 VAL 201 F CG2 VAL 60 1 Y 1 F OG SER 204 F OG SER 63 1 Y 1 F OG SER 205 F OG SER 64 1 Y 1 F NZ LYS 212 F NZ LYS 71 1 Y 1 F CA PRO 215 F CA PRO 74 1 Y 1 F C PRO 215 F C PRO 74 1 Y 1 F O PRO 215 F O PRO 74 1 Y 1 F CB PRO 215 F CB PRO 74 1 Y 1 F CG PRO 215 F CG PRO 74 1 Y 1 F CD PRO 215 F CD PRO 74 1 Y 1 A GLY 142 A GLY 1 1 Y 1 A ALA 143 A ALA 2 1 Y 1 A THR 144 A THR 3 1 Y 1 A GLU 145 A GLU 4 1 Y 1 A SER 146 A SER 5 1 Y 1 A PRO 215 A PRO 74 1 Y 1 A SER 216 A SER 75 1 Y 1 A LYS 217 A LYS 76 1 Y 1 A LEU 218 A LEU 77 1 Y 1 A GLN 219 A GLN 78 1 Y 1 A LYS 220 A LYS 79 1 Y 1 B GLY 142 B GLY 1 1 Y 1 B ALA 143 B ALA 2 1 Y 1 B THR 144 B THR 3 1 Y 1 B GLU 145 B GLU 4 1 Y 1 B SER 146 B SER 5 1 Y 1 B GLY 147 B GLY 6 1 Y 1 B SER 216 B SER 75 1 Y 1 B LYS 217 B LYS 76 1 Y 1 B LEU 218 B LEU 77 1 Y 1 B GLN 219 B GLN 78 1 Y 1 B LYS 220 B LYS 79 1 Y 1 E GLY 142 E GLY 1 1 Y 1 E ALA 143 E ALA 2 1 Y 1 E THR 144 E THR 3 1 Y 1 E GLU 145 E GLU 4 1 Y 1 E SER 146 E SER 5 1 Y 1 E SER 216 E SER 75 1 Y 1 E LYS 217 E LYS 76 1 Y 1 E LEU 218 E LEU 77 1 Y 1 E GLN 219 E GLN 78 1 Y 1 E LYS 220 E LYS 79 1 Y 1 F GLY 142 F GLY 1 1 Y 1 F ALA 143 F ALA 2 1 Y 1 F THR 144 F THR 3 1 Y 1 F GLU 145 F GLU 4 1 Y 1 F SER 146 F SER 5 1 Y 1 F SER 216 F SER 75 1 Y 1 F LYS 217 F LYS 76 1 Y 1 F LEU 218 F LEU 77 1 Y 1 F GLN 219 F GLN 78 1 Y 1 F LYS 220 F LYS 79 1 Y 1 10.17 1.50 119.30 129.47 B B B C N CA CYS PRO PRO 152 153 153 Y 1 10.25 1.50 119.30 129.55 E E E C N CA MET PRO PRO 214 215 215 Y 109.670 48.2930 13.410 -0.5300 -0.8300 0.9800 0.8700 -0.7800 -1.6800 0.9280 0.8990 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED 0.2717 0.2316 0.2331 2.3000 35.1000 808 21914 3.6000 95.3900 17.7140 0.2140 thin resolution shells (sftools) 1 THROUGHOUT 0.000 FOURIER SYNTHESIS 0.3100 0.2410 0.8000 0.8000 1.2000 rigid body refinement (refmac5/dimple) of a currently unpublished, isomorphous structure of a similar MBD2-DNA complex against current data. MAXIMUM LIKELIHOOD MASK 2.3000 35.1000 25 3076 30.47 34.84 42 974 2035 322 0.014 0.017 3176 0.002 0.020 2407 1.793 1.696 4484 1.219 3.000 5571 6.669 5.000 269 28.992 21.139 79 14.053 15.000 329 18.842 15.000 19 0.100 0.200 427 0.013 0.021 2922 0.002 0.020 717 1.353 3.113 1084 1.352 3.111 1082 2.170 4.658 1350 0.2660 2.3590 1698 20 95.8200 1.990 35.490 6C1U 33843 0.998 0.036 0.033 0.049 1 11.300 64867 1.900 0 92.600 0.578 1.990 2.050 2842 1691 0.588 0.530 0.786 1 1.100 1.700 63.000 0.023 8.920 35.490 765 388 0.997 0.020 0.031 1 31.900 2.000 93.900 refinement REFMAC 5.8.0158 data scaling Aimless 0.5.32 data extraction PDB_EXTRACT 3.22 data reduction XDS phasing REFMAC N MBD2 in complex with a deoxy-oligonucleotide 1 N N 1 N N 2 N N 3 N N 1 N N 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N 5 N N 5 N N 5 N N 5 N N 5 N N A SER 189 A SER 48 HELX_P A GLY 198 A GLY 57 1 AA1 10 A ASN 199 A ASN 58 HELX_P A VAL 201 A VAL 60 5 AA2 3 B SER 189 B SER 48 HELX_P B GLY 198 B GLY 57 1 AA3 10 E SER 189 E SER 48 HELX_P E GLY 198 E GLY 57 1 AA4 10 E ASN 199 E ASN 58 HELX_P E VAL 201 E VAL 60 5 AA5 3 F SER 189 F SER 48 HELX_P F GLY 198 F GLY 57 1 AA6 10 F ASN 199 F ASN 58 HELX_P F VAL 201 F VAL 60 5 AA7 3 covale 1.629 both D DA 5 D O3' DA 5 1_555 D 5CM 6 D P 5CM 6 1_555 covale 1.609 both D 5CM 6 D O3' 5CM 6 1_555 D DA 7 D P DA 7 1_555 covale 1.584 both H DA 5 H O3' DA 5 1_555 H 5CM 6 H P 5CM 6 1_555 covale 1.589 both H 5CM 6 H O3' 5CM 6 1_555 H DA 7 H P DA 7 1_555 hydrog WATSON-CRICK C DC 1 C N3 DC 1 1_555 D DG 12 D N1 DG 12 1_555 hydrog WATSON-CRICK C DC 1 C N4 DC 1 1_555 D DG 12 D O6 DG 12 1_555 hydrog WATSON-CRICK C DC 1 C O2 DC 1 1_555 D DG 12 D N2 DG 12 1_555 hydrog WATSON-CRICK C DG 2 C N1 DG 2 1_555 D DC 11 D N3 DC 11 1_555 hydrog WATSON-CRICK C DG 2 C N2 DG 2 1_555 D DC 11 D O2 DC 11 1_555 hydrog WATSON-CRICK C DG 2 C O6 DG 2 1_555 D DC 11 D N4 DC 11 1_555 hydrog WATSON-CRICK C DG 3 C N1 DG 3 1_555 D DC 10 D N3 DC 10 1_555 hydrog WATSON-CRICK C DG 3 C N2 DG 3 1_555 D DC 10 D O2 DC 10 1_555 hydrog WATSON-CRICK C DG 3 C O6 DG 3 1_555 D DC 10 D N4 DC 10 1_555 hydrog WATSON-CRICK C DA 4 C N1 DA 4 1_555 D DT 9 D N3 DT 9 1_555 hydrog WATSON-CRICK C DA 4 C N6 DA 4 1_555 D DT 9 D O4 DT 9 1_555 hydrog WATSON-CRICK C DG 5 C N1 DG 5 1_555 D DC 8 D N3 DC 8 1_555 hydrog WATSON-CRICK C DG 5 C N2 DG 5 1_555 D DC 8 D O2 DC 8 1_555 hydrog WATSON-CRICK C DG 5 C O6 DG 5 1_555 D DC 8 D N4 DC 8 1_555 hydrog WATSON-CRICK C DT 6 C N3 DT 6 1_555 D DA 7 D N1 DA 7 1_555 hydrog WATSON-CRICK C DT 6 C O4 DT 6 1_555 D DA 7 D N6 DA 7 1_555 hydrog WATSON-CRICK C DG 7 C N1 DG 7 1_555 D 5CM 6 D N3 5CM 6 1_555 hydrog WATSON-CRICK C DG 7 C N2 DG 7 1_555 D 5CM 6 D O2 5CM 6 1_555 hydrog WATSON-CRICK C DG 7 C O6 DG 7 1_555 D 5CM 6 D N4 5CM 6 1_555 hydrog WATSON-CRICK C DT 8 C N3 DT 8 1_555 D DA 5 D N1 DA 5 1_555 hydrog WATSON-CRICK C DT 8 C O4 DT 8 1_555 D DA 5 D N6 DA 5 1_555 hydrog WATSON-CRICK C DG 9 C N1 DG 9 1_555 D DC 4 D N3 DC 4 1_555 hydrog WATSON-CRICK C DG 9 C N2 DG 9 1_555 D DC 4 D O2 DC 4 1_555 hydrog WATSON-CRICK C DG 9 C O6 DG 9 1_555 D DC 4 D N4 DC 4 1_555 hydrog WATSON-CRICK C DG 10 C N1 DG 10 1_555 D DC 3 D N3 DC 3 1_555 hydrog WATSON-CRICK C DG 10 C N2 DG 10 1_555 D DC 3 D O2 DC 3 1_555 hydrog WATSON-CRICK C DG 10 C O6 DG 10 1_555 D DC 3 D N4 DC 3 1_555 hydrog WATSON-CRICK C DG 11 C N1 DG 11 1_555 D DC 2 D N3 DC 2 1_555 hydrog WATSON-CRICK C DG 11 C N2 DG 11 1_555 D DC 2 D O2 DC 2 1_555 hydrog WATSON-CRICK C DG 11 C O6 DG 11 1_555 D DC 2 D N4 DC 2 1_555 hydrog WATSON-CRICK C DC 12 C N3 DC 12 1_555 D DG 1 D N1 DG 1 1_555 hydrog WATSON-CRICK C DC 12 C N4 DC 12 1_555 D DG 1 D O6 DG 1 1_555 hydrog WATSON-CRICK C DC 12 C O2 DC 12 1_555 D DG 1 D N2 DG 1 1_555 hydrog WATSON-CRICK G DC 1 G N3 DC 1 1_555 H DG 12 H N1 DG 12 1_555 hydrog WATSON-CRICK G DC 1 G N4 DC 1 1_555 H DG 12 H O6 DG 12 1_555 hydrog WATSON-CRICK G DC 1 G O2 DC 1 1_555 H DG 12 H N2 DG 12 1_555 hydrog WATSON-CRICK G DG 2 G N1 DG 2 1_555 H DC 11 H N3 DC 11 1_555 hydrog WATSON-CRICK G DG 2 G N2 DG 2 1_555 H DC 11 H O2 DC 11 1_555 hydrog WATSON-CRICK G DG 2 G O6 DG 2 1_555 H DC 11 H N4 DC 11 1_555 hydrog WATSON-CRICK G DG 3 G N1 DG 3 1_555 H DC 10 H N3 DC 10 1_555 hydrog WATSON-CRICK G DG 3 G N2 DG 3 1_555 H DC 10 H O2 DC 10 1_555 hydrog WATSON-CRICK G DG 3 G O6 DG 3 1_555 H DC 10 H N4 DC 10 1_555 hydrog WATSON-CRICK G DA 4 G N1 DA 4 1_555 H DT 9 H N3 DT 9 1_555 hydrog WATSON-CRICK G DA 4 G N6 DA 4 1_555 H DT 9 H O4 DT 9 1_555 hydrog WATSON-CRICK G DG 5 G N1 DG 5 1_555 H DC 8 H N3 DC 8 1_555 hydrog WATSON-CRICK G DG 5 G N2 DG 5 1_555 H DC 8 H O2 DC 8 1_555 hydrog WATSON-CRICK G DG 5 G O6 DG 5 1_555 H DC 8 H N4 DC 8 1_555 hydrog WATSON-CRICK G DT 6 G N3 DT 6 1_555 H DA 7 H N1 DA 7 1_555 hydrog WATSON-CRICK G DT 6 G O4 DT 6 1_555 H DA 7 H N6 DA 7 1_555 hydrog WATSON-CRICK G DG 7 G N1 DG 7 1_555 H 5CM 6 H N3 5CM 6 1_555 hydrog WATSON-CRICK G DG 7 G N2 DG 7 1_555 H 5CM 6 H O2 5CM 6 1_555 hydrog WATSON-CRICK G DG 7 G O6 DG 7 1_555 H 5CM 6 H N4 5CM 6 1_555 hydrog WATSON-CRICK G DT 8 G N3 DT 8 1_555 H DA 5 H N1 DA 5 1_555 hydrog WATSON-CRICK G DT 8 G O4 DT 8 1_555 H DA 5 H N6 DA 5 1_555 hydrog WATSON-CRICK G DG 9 G N1 DG 9 1_555 H DC 4 H N3 DC 4 1_555 hydrog WATSON-CRICK G DG 9 G N2 DG 9 1_555 H DC 4 H O2 DC 4 1_555 hydrog WATSON-CRICK G DG 9 G O6 DG 9 1_555 H DC 4 H N4 DC 4 1_555 hydrog WATSON-CRICK G DG 10 G N1 DG 10 1_555 H DC 3 H N3 DC 3 1_555 hydrog WATSON-CRICK G DG 10 G N2 DG 10 1_555 H DC 3 H O2 DC 3 1_555 hydrog WATSON-CRICK G DG 10 G O6 DG 10 1_555 H DC 3 H N4 DC 3 1_555 hydrog WATSON-CRICK G DG 11 G N1 DG 11 1_555 H DC 2 H N3 DC 2 1_555 hydrog WATSON-CRICK G DG 11 G N2 DG 11 1_555 H DC 2 H O2 DC 2 1_555 hydrog WATSON-CRICK G DG 11 G O6 DG 11 1_555 H DC 2 H N4 DC 2 1_555 hydrog WATSON-CRICK G DC 12 G N3 DC 12 1_555 H DG 1 H N1 DG 1 1_555 hydrog WATSON-CRICK G DC 12 G N4 DC 12 1_555 H DG 1 H O6 DG 1 1_555 hydrog WATSON-CRICK G DC 12 G O2 DC 12 1_555 H DG 1 H N2 DG 1 1_555 DNA BINDING PROTEIN/DNA MBD, DNA-binding, Structural Genomics, Structural Genomics Consortium, SGC, DNA BINDING PROTEIN-DNA complex MBD2_HUMAN UNP 1 143 Q9UBB5 ATESGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQK 6C1U PDB 2 1 6C1U 6C1U PDB 3 1 6C1U 143 220 6C1U 143 220 Q9UBB5 A 1 2 79 143 220 6C1U 143 220 Q9UBB5 B 1 2 79 1 12 6C1U 1 12 6C1U C 2 1 12 1 12 6C1U 1 12 6C1U D 3 1 12 143 220 6C1U 143 220 Q9UBB5 E 1 2 79 143 220 6C1U 143 220 Q9UBB5 F 1 2 79 1 12 6C1U 1 12 6C1U G 2 1 12 1 12 6C1U 1 12 6C1U H 3 1 12 1 expression tag GLY 142 6C1U A Q9UBB5 UNP 1 2 expression tag GLY 142 6C1U B Q9UBB5 UNP 1 5 expression tag GLY 142 6C1U E Q9UBB5 UNP 1 6 expression tag GLY 142 6C1U F Q9UBB5 UNP 1 4 2 4 2 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A MET 150 A MET 9 A ASP 151 A ASP 10 A LYS 160 A LYS 19 A ILE 165 A ILE 24 A SER 175 A SER 34 A PHE 180 A PHE 39 A LYS 186 A LYS 45 A PHE 187 A PHE 46 A PHE 206 A PHE 65 A ASP 207 A ASP 66 A LYS 212 A LYS 71 A MET 213 A MET 72 B MET 150 B MET 9 B ASP 151 B ASP 10 B LYS 160 B LYS 19 B ILE 165 B ILE 24 B SER 175 B SER 34 B PHE 180 B PHE 39 B LYS 186 B LYS 45 B PHE 187 B PHE 46 B PHE 206 B PHE 65 B ASP 207 B ASP 66 B LYS 212 B LYS 71 B MET 213 B MET 72 E MET 150 E MET 9 E ASP 151 E ASP 10 E LYS 160 E LYS 19 E ILE 165 E ILE 24 E SER 175 E SER 34 E PHE 180 E PHE 39 E LYS 186 E LYS 45 E PHE 187 E PHE 46 F MET 150 F MET 9 F ASP 151 F ASP 10 F LYS 160 F LYS 19 F ILE 165 F ILE 24 F SER 175 F SER 34 F PHE 180 F PHE 39 F LYS 186 F LYS 45 F PHE 187 F PHE 46 binding site for Di-nucleotide DA D 5 and 5CM D 6 D DA 5 Software 9 binding site for Di-nucleotide 5CM D 6 and DA D 7 D 5CM 6 Software 8 binding site for Di-nucleotide DA H 5 and 5CM H 6 H DA 5 Software 10 binding site for Di-nucleotide 5CM H 6 and DA H 7 H 5CM 6 Software 9 A ARG 188 A ARG 47 9 1_555 A SER 189 A SER 48 9 1_555 A PRO 191 A PRO 50 9 1_555 A ARG 195 A ARG 54 9 1_555 C DG 7 C DG 7 9 1_555 C DT 8 C DT 8 9 1_555 C DG 9 C DG 9 9 1_555 D DC 4 D DC 4 9 1_555 D DA 7 D DA 7 9 1_555 A ARG 188 A ARG 47 8 1_555 A SER 189 A SER 48 8 1_555 A ARG 195 A ARG 54 8 1_555 C DG 5 C DG 5 8 1_555 C DT 6 C DT 6 8 1_555 C DG 7 C DG 7 8 1_555 D DA 5 D DA 5 8 1_555 D DC 8 D DC 8 8 1_555 E ARG 188 E ARG 47 10 1_555 E SER 189 E SER 48 10 1_555 E PRO 191 E PRO 50 10 1_555 E ARG 195 E ARG 54 10 1_555 E HOH 403 CB HOH 10 1_555 G DG 7 G DG 7 10 1_555 G DT 8 G DT 8 10 1_555 G DG 9 G DG 9 10 1_555 H DC 4 H DC 4 10 1_555 H DA 7 H DA 7 10 1_555 E ARG 188 E ARG 47 9 1_555 E SER 189 E SER 48 9 1_555 E ARG 195 E ARG 54 9 1_555 E HOH 403 CB HOH 9 1_555 G DG 5 G DG 5 9 1_555 G DT 6 G DT 6 9 1_555 G DG 7 G DG 7 9 1_555 H DA 5 H DA 5 9 1_555 H DC 8 H DC 8 9 1_555 1 P 1