0.012226 0.000000 0.002140 0.000000 0.036762 0.000000 0.000000 0.000000 0.018207 0.00000 0.00000 0.00000 Grosjean, H. Aimon, A. Krojer, T. Talon, R. Douangamath, A. Koekemoer, L. Arrowsmith, C.H. Edwards, A. Bountra, C. von Delft, F. Biggin, P.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 99.930 90.000 81.795 27.202 55.760 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C7 H8 Br N O2 218.048 4-bromo-1-(2-hydroxyethyl)pyridin-2(1H)-one non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N C N 373 N C N 374 N C N 375 N N N 376 N C N 377 N O N 378 N C N 379 N C N 380 N C N 381 N O N 382 N BR N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N N N 392 S C N 393 N C N 394 N O N 395 N C N 396 N C N 397 N C N 398 N O N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N doub N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing NE J.Comput.Aided Mol.Des. 1573-4951 36 291 311 10.1007/s10822-022-00452-7 35426591 SAMPL7 protein-ligand challenge: A community-wide evaluation of computational methods against fragment screening and pose-prediction. 2022 0000-0002-6789-952X 0000-0002-9135-129X 0000-0002-1083-5533 0000-0003-0542-119X 0000-0003-0378-0017 0000-0001-5100-8836 10.2210/pdb5rjp/pdb pdb_00005rjp 100 1 PIXEL 2019-07-09 DECTRIS PILATUS 6M SINGLE WAVELENGTH x-ray 1 0.97622 1.0 I04-1 Diamond 0.97622 SYNCHROTRON DIAMOND BEAMLINE I04-1 17627.859 PH-interacting protein 1 man polymer 218.048 4-bromo-1-(2-hydroxyethyl)pyridin-2(1H)-one 1 syn non-polymer 18.015 water 232 nat water PHIP,DDB1- and CUL4-associated factor 14,IRS-1 PH domain-binding protein,WD repeat-containing protein 11 no no MHHHHHHSSGVDLGTENLYFQSMSYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLE AGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKR MHHHHHHSSGVDLGTENLYFQSMSYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLE AGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 149 PHIP, DCAF14, WDR11 9606 Homo sapiens 562 escherichia coli Biological sequence 1 1.73 29.03 0.100 VAPOR DIFFUSION, SITTING DROP 5.6 20% PEG 8000, 0.04M potassium phosphate 277 chem_comp_atom chem_comp_bond database_2 citation citation_author pdbx_entry_details pdbx_initial_refinement_model repository Initial release Data collection Database references Database references Structure summary Refinement description 1 0 2020-06-17 1 1 2024-03-06 1 2 2026-01-21 1 3 2026-02-18 _database_2.pdbx_DOI _database_2.pdbx_database_accession _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _pdbx_entry_details.has_protein_modification RCSB Y RCSB 2020-06-02 REL REL The second bromodomain of Pleckstrin homology domain interacting protein (PHIP) screened against the DSI and FragLite fragment libraries by X-ray Crystallography at the XChem facility of Diamond Light Source beamline I04-1 PanDDA analysis group deposition changed state 1 A O HOH 1832 6.54 UUS UUS SUBJECT OF INVESTIGATION UUS 4-bromo-1-(2-hydroxyethyl)pyridin-2(1H)-one HOH water Y N 3MB3 3MB3 PDB experimental model LIG 1501 2 UUS UUS 1501 A HOH 195 3 HOH HOH 1601 A HOH 7 3 HOH HOH 1602 A HOH 89 3 HOH HOH 1603 A HOH 121 3 HOH HOH 1604 A HOH 1 3 HOH HOH 1605 A HOH 183 3 HOH HOH 1606 A HOH 98 3 HOH HOH 1607 A HOH 17 3 HOH HOH 1608 A HOH 85 3 HOH HOH 1609 A HOH 32 3 HOH HOH 1610 A HOH 141 3 HOH HOH 1611 A HOH 25 3 HOH HOH 1612 A HOH 50 3 HOH HOH 1613 A HOH 197 3 HOH HOH 1614 A HOH 162 3 HOH HOH 1615 A HOH 151 3 HOH HOH 1616 A HOH 74 3 HOH HOH 1617 A HOH 176 3 HOH HOH 1618 A HOH 124 3 HOH HOH 1619 A HOH 31 3 HOH HOH 1620 A HOH 187 3 HOH HOH 1621 A HOH 94 3 HOH HOH 1622 A HOH 160 3 HOH HOH 1623 A HOH 83 3 HOH HOH 1624 A HOH 33 3 HOH HOH 1625 A HOH 59 3 HOH HOH 1626 A HOH 172 3 HOH HOH 1627 A HOH 12 3 HOH HOH 1628 A HOH 123 3 HOH HOH 1629 A HOH 139 3 HOH HOH 1630 A HOH 10 3 HOH HOH 1631 A HOH 135 3 HOH HOH 1632 A HOH 41 3 HOH HOH 1633 A HOH 154 3 HOH HOH 1634 A HOH 60 3 HOH HOH 1635 A HOH 55 3 HOH HOH 1636 A HOH 16 3 HOH HOH 1637 A HOH 84 3 HOH HOH 1638 A HOH 35 3 HOH HOH 1639 A HOH 76 3 HOH HOH 1640 A HOH 180 3 HOH HOH 1641 A HOH 21 3 HOH HOH 1642 A HOH 9 3 HOH HOH 1643 A HOH 140 3 HOH HOH 1644 A HOH 16 3 HOH HOH 1645 A HOH 20 3 HOH HOH 1646 A HOH 31 3 HOH HOH 1647 A HOH 184 3 HOH HOH 1648 A HOH 1 3 HOH HOH 1649 A HOH 36 3 HOH HOH 1650 A HOH 35 3 HOH HOH 1651 A HOH 101 3 HOH HOH 1652 A HOH 4 3 HOH HOH 1653 A HOH 32 3 HOH HOH 1654 A HOH 182 3 HOH HOH 1655 A HOH 144 3 HOH HOH 1656 A HOH 70 3 HOH HOH 1657 A HOH 159 3 HOH HOH 1658 A HOH 191 3 HOH HOH 1659 A HOH 54 3 HOH HOH 1660 A HOH 5 3 HOH HOH 1661 A HOH 39 3 HOH HOH 1662 A HOH 77 3 HOH HOH 1663 A HOH 14 3 HOH HOH 1664 A HOH 9 3 HOH HOH 1665 A HOH 45 3 HOH HOH 1666 A HOH 128 3 HOH HOH 1667 A HOH 62 3 HOH HOH 1668 A HOH 105 3 HOH HOH 1669 A HOH 130 3 HOH HOH 1670 A HOH 119 3 HOH HOH 1671 A HOH 152 3 HOH HOH 1672 A HOH 11 3 HOH HOH 1673 A HOH 28 3 HOH HOH 1674 A HOH 92 3 HOH HOH 1675 A HOH 143 3 HOH HOH 1676 A HOH 108 3 HOH HOH 1677 A HOH 65 3 HOH HOH 1678 A HOH 3 3 HOH HOH 1679 A HOH 44 3 HOH HOH 1680 A HOH 142 3 HOH HOH 1681 A HOH 6 3 HOH HOH 1682 A HOH 64 3 HOH HOH 1683 A HOH 69 3 HOH HOH 1684 A HOH 113 3 HOH HOH 1685 A HOH 24 3 HOH HOH 1686 A HOH 23 3 HOH HOH 1687 A HOH 177 3 HOH HOH 1688 A HOH 106 3 HOH HOH 1689 A HOH 19 3 HOH HOH 1690 A HOH 129 3 HOH HOH 1691 A HOH 63 3 HOH HOH 1692 A HOH 40 3 HOH HOH 1693 A HOH 43 3 HOH HOH 1694 A HOH 29 3 HOH HOH 1695 A HOH 52 3 HOH HOH 1696 A HOH 178 3 HOH HOH 1697 A HOH 71 3 HOH HOH 1698 A HOH 27 3 HOH HOH 1699 A HOH 56 3 HOH HOH 1700 A HOH 116 3 HOH HOH 1701 A HOH 18 3 HOH HOH 1702 A HOH 138 3 HOH HOH 1703 A HOH 82 3 HOH HOH 1704 A HOH 19 3 HOH HOH 1705 A HOH 75 3 HOH HOH 1706 A HOH 179 3 HOH HOH 1707 A HOH 66 3 HOH HOH 1708 A HOH 42 3 HOH HOH 1709 A HOH 137 3 HOH HOH 1710 A HOH 88 3 HOH HOH 1711 A HOH 38 3 HOH HOH 1712 A HOH 48 3 HOH HOH 1713 A HOH 18 3 HOH HOH 1714 A HOH 37 3 HOH HOH 1715 A HOH 6 3 HOH HOH 1716 A HOH 122 3 HOH HOH 1717 A HOH 127 3 HOH HOH 1718 A HOH 36 3 HOH HOH 1719 A HOH 15 3 HOH HOH 1720 A HOH 30 3 HOH HOH 1721 A HOH 120 3 HOH HOH 1722 A HOH 67 3 HOH HOH 1723 A HOH 58 3 HOH HOH 1724 A HOH 23 3 HOH HOH 1725 A HOH 24 3 HOH HOH 1726 A HOH 81 3 HOH HOH 1727 A HOH 42 3 HOH HOH 1728 A HOH 91 3 HOH HOH 1729 A HOH 134 3 HOH HOH 1730 A HOH 26 3 HOH HOH 1731 A HOH 157 3 HOH HOH 1732 A HOH 90 3 HOH HOH 1733 A HOH 145 3 HOH HOH 1734 A HOH 53 3 HOH HOH 1735 A HOH 80 3 HOH HOH 1736 A HOH 2 3 HOH HOH 1737 A HOH 49 3 HOH HOH 1738 A HOH 57 3 HOH HOH 1739 A HOH 125 3 HOH HOH 1740 A HOH 136 3 HOH HOH 1741 A HOH 86 3 HOH HOH 1742 A HOH 22 3 HOH HOH 1743 A HOH 173 3 HOH HOH 1744 A HOH 21 3 HOH HOH 1745 A HOH 175 3 HOH HOH 1746 A HOH 109 3 HOH HOH 1747 A HOH 95 3 HOH HOH 1748 A HOH 174 3 HOH HOH 1749 A HOH 146 3 HOH HOH 1750 A HOH 117 3 HOH HOH 1751 A HOH 118 3 HOH HOH 1752 A HOH 34 3 HOH HOH 1753 A HOH 13 3 HOH HOH 1754 A HOH 165 3 HOH HOH 1755 A HOH 72 3 HOH HOH 1756 A HOH 167 3 HOH HOH 1757 A HOH 14 3 HOH HOH 1758 A HOH 28 3 HOH HOH 1759 A HOH 158 3 HOH HOH 1760 A HOH 131 3 HOH HOH 1761 A HOH 96 3 HOH HOH 1762 A HOH 150 3 HOH HOH 1763 A HOH 164 3 HOH HOH 1764 A HOH 20 3 HOH HOH 1765 A HOH 153 3 HOH HOH 1766 A HOH 181 3 HOH HOH 1767 A HOH 126 3 HOH HOH 1768 A HOH 29 3 HOH HOH 1769 A HOH 166 3 HOH HOH 1770 A HOH 33 3 HOH HOH 1771 A HOH 194 3 HOH HOH 1772 A HOH 185 3 HOH HOH 1773 A HOH 37 3 HOH HOH 1774 A HOH 115 3 HOH HOH 1775 A HOH 133 3 HOH HOH 1776 A HOH 8 3 HOH HOH 1777 A HOH 199 3 HOH HOH 1778 A HOH 26 3 HOH HOH 1779 A HOH 198 3 HOH HOH 1780 A HOH 163 3 HOH HOH 1781 A HOH 4 3 HOH HOH 1782 A HOH 114 3 HOH HOH 1783 A HOH 61 3 HOH HOH 1784 A HOH 34 3 HOH HOH 1785 A HOH 156 3 HOH HOH 1786 A HOH 107 3 HOH HOH 1787 A HOH 27 3 HOH HOH 1788 A HOH 112 3 HOH HOH 1789 A HOH 30 3 HOH HOH 1790 A HOH 186 3 HOH HOH 1791 A HOH 190 3 HOH HOH 1792 A HOH 51 3 HOH HOH 1793 A HOH 43 3 HOH HOH 1794 A HOH 10 3 HOH HOH 1795 A HOH 38 3 HOH HOH 1796 A HOH 22 3 HOH HOH 1797 A HOH 8 3 HOH HOH 1798 A HOH 201 3 HOH HOH 1799 A HOH 3 3 HOH HOH 1800 A HOH 41 3 HOH HOH 1801 A HOH 110 3 HOH HOH 1802 A HOH 13 3 HOH HOH 1803 A HOH 104 3 HOH HOH 1804 A HOH 188 3 HOH HOH 1805 A HOH 102 3 HOH HOH 1806 A HOH 78 3 HOH HOH 1807 A HOH 46 3 HOH HOH 1808 A HOH 68 3 HOH HOH 1809 A HOH 170 3 HOH HOH 1810 A HOH 168 3 HOH HOH 1811 A HOH 73 3 HOH HOH 1812 A HOH 103 3 HOH HOH 1813 A HOH 5 3 HOH HOH 1814 A HOH 11 3 HOH HOH 1815 A HOH 12 3 HOH HOH 1816 A HOH 200 3 HOH HOH 1817 A HOH 2 3 HOH HOH 1818 A HOH 196 3 HOH HOH 1819 A HOH 39 3 HOH HOH 1820 A HOH 40 3 HOH HOH 1821 A HOH 148 3 HOH HOH 1822 A HOH 17 3 HOH HOH 1823 A HOH 111 3 HOH HOH 1824 A HOH 192 3 HOH HOH 1825 A HOH 7 3 HOH HOH 1826 A HOH 189 3 HOH HOH 1827 A HOH 87 3 HOH HOH 1828 A HOH 97 3 HOH HOH 1829 A HOH 79 3 HOH HOH 1830 A HOH 25 3 HOH HOH 1831 A HOH 15 3 HOH HOH 1832 A n 1 1292 A n 2 1293 A n 3 1294 A n 4 1295 A n 5 1296 A n 6 1297 A n 7 1298 A n 8 1299 A n 9 1300 A n 10 1301 A n 11 1302 A n 12 1303 A n 13 1304 A n 14 1305 A n 15 1306 A n 16 1307 A n 17 1308 A n 18 1309 A n 19 1310 A n 20 1311 A n 21 1312 A n 22 1313 A n 23 1314 A n 24 1315 A TYR 1316 n 25 TYR 1316 A ASP 1317 n 26 ASP 1317 A ILE 1318 n 27 ILE 1318 A GLN 1319 n 28 GLN 1319 A ALA 1320 n 29 ALA 1320 A TRP 1321 n 30 TRP 1321 A LYS 1322 n 31 LYS 1322 A LYS 1323 n 32 LYS 1323 A GLN 1324 n 33 GLN 1324 A CYS 1325 n 34 CYS 1325 A GLU 1326 n 35 GLU 1326 A GLU 1327 n 36 GLU 1327 A LEU 1328 n 37 LEU 1328 A LEU 1329 n 38 LEU 1329 A ASN 1330 n 39 ASN 1330 A LEU 1331 n 40 LEU 1331 A ILE 1332 n 41 ILE 1332 A PHE 1333 n 42 PHE 1333 A GLN 1334 n 43 GLN 1334 A CYS 1335 n 44 CYS 1335 A GLU 1336 n 45 GLU 1336 A ASP 1337 n 46 ASP 1337 A SER 1338 n 47 SER 1338 A GLU 1339 n 48 GLU 1339 A PRO 1340 n 49 PRO 1340 A PHE 1341 n 50 PHE 1341 A ARG 1342 n 51 ARG 1342 A GLN 1343 n 52 GLN 1343 A PRO 1344 n 53 PRO 1344 A VAL 1345 n 54 VAL 1345 A ASP 1346 n 55 ASP 1346 A LEU 1347 n 56 LEU 1347 A LEU 1348 n 57 LEU 1348 A GLU 1349 n 58 GLU 1349 A TYR 1350 n 59 TYR 1350 A PRO 1351 n 60 PRO 1351 A ASP 1352 n 61 ASP 1352 A TYR 1353 n 62 TYR 1353 A ARG 1354 n 63 ARG 1354 A ASP 1355 n 64 ASP 1355 A ILE 1356 n 65 ILE 1356 A ILE 1357 n 66 ILE 1357 A ASP 1358 n 67 ASP 1358 A THR 1359 n 68 THR 1359 A PRO 1360 n 69 PRO 1360 A MET 1361 n 70 MET 1361 A ASP 1362 n 71 ASP 1362 A PHE 1363 n 72 PHE 1363 A ALA 1364 n 73 ALA 1364 A THR 1365 n 74 THR 1365 A VAL 1366 n 75 VAL 1366 A ARG 1367 n 76 ARG 1367 A GLU 1368 n 77 GLU 1368 A THR 1369 n 78 THR 1369 A LEU 1370 n 79 LEU 1370 A GLU 1371 n 80 GLU 1371 A ALA 1372 n 81 ALA 1372 A GLY 1373 n 82 GLY 1373 A ASN 1374 n 83 ASN 1374 A TYR 1375 n 84 TYR 1375 A GLU 1376 n 85 GLU 1376 A SER 1377 n 86 SER 1377 A PRO 1378 n 87 PRO 1378 A MET 1379 n 88 MET 1379 A GLU 1380 n 89 GLU 1380 A LEU 1381 n 90 LEU 1381 A CYS 1382 n 91 CYS 1382 A LYS 1383 n 92 LYS 1383 A ASP 1384 n 93 ASP 1384 A VAL 1385 n 94 VAL 1385 A ARG 1386 n 95 ARG 1386 A LEU 1387 n 96 LEU 1387 A ILE 1388 n 97 ILE 1388 A PHE 1389 n 98 PHE 1389 A SER 1390 n 99 SER 1390 A ASN 1391 n 100 ASN 1391 A SER 1392 n 101 SER 1392 A LYS 1393 n 102 LYS 1393 A ALA 1394 n 103 ALA 1394 A TYR 1395 n 104 TYR 1395 A THR 1396 n 105 THR 1396 A PRO 1397 n 106 PRO 1397 A SER 1398 n 107 SER 1398 A LYS 1399 n 108 LYS 1399 A ARG 1400 n 109 ARG 1400 A SER 1401 n 110 SER 1401 A ARG 1402 n 111 ARG 1402 A ILE 1403 n 112 ILE 1403 A TYR 1404 n 113 TYR 1404 A SER 1405 n 114 SER 1405 A MET 1406 n 115 MET 1406 A SER 1407 n 116 SER 1407 A LEU 1408 n 117 LEU 1408 A ARG 1409 n 118 ARG 1409 A LEU 1410 n 119 LEU 1410 A SER 1411 n 120 SER 1411 A ALA 1412 n 121 ALA 1412 A PHE 1413 n 122 PHE 1413 A PHE 1414 n 123 PHE 1414 A GLU 1415 n 124 GLU 1415 A GLU 1416 n 125 GLU 1416 A HIS 1417 n 126 HIS 1417 A ILE 1418 n 127 ILE 1418 A SER 1419 n 128 SER 1419 A SER 1420 n 129 SER 1420 A VAL 1421 n 130 VAL 1421 A LEU 1422 n 131 LEU 1422 A SER 1423 n 132 SER 1423 A ASP 1424 n 133 ASP 1424 A TYR 1425 n 134 TYR 1425 A LYS 1426 n 135 LYS 1426 A SER 1427 n 136 SER 1427 A ALA 1428 n 137 ALA 1428 A LEU 1429 n 138 LEU 1429 A ARG 1430 n 139 ARG 1430 A PHE 1431 n 140 PHE 1431 A HIS 1432 n 141 HIS 1432 A LYS 1433 n 142 LYS 1433 A ARG 1434 n 143 ARG 1434 A n 144 1435 A n 145 1436 A n 146 1437 A n 147 1438 A n 148 1439 A n 149 1440 A 0.8782 0.1196 -0.6194 0.3071 0.0376 1.3911 0.0098 0.0437 0.0340 0.0116 0.0085 0.0044 -0.0288 0.0566 -0.0183 -0.0280 0.0021 0.0073 -0.0231 0.0037 -0.0220 refined -14.2335 12.4681 12.7336 X-RAY DIFFRACTION A 1316 A 1434 X-RAY DIFFRACTION 1 { A|* } author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A HOH 1689 C HOH 1 A HOH 1824 C HOH 1 A CE LYS 1323 A CE LYS 32 1 Y 1 A NZ LYS 1323 A NZ LYS 32 1 Y 1 A MET 1292 A MET 1 1 Y 1 A HIS 1293 A HIS 2 1 Y 1 A HIS 1294 A HIS 3 1 Y 1 A HIS 1295 A HIS 4 1 Y 1 A HIS 1296 A HIS 5 1 Y 1 A HIS 1297 A HIS 6 1 Y 1 A HIS 1298 A HIS 7 1 Y 1 A SER 1299 A SER 8 1 Y 1 A SER 1300 A SER 9 1 Y 1 A GLY 1301 A GLY 10 1 Y 1 A VAL 1302 A VAL 11 1 Y 1 A ASP 1303 A ASP 12 1 Y 1 A LEU 1304 A LEU 13 1 Y 1 A GLY 1305 A GLY 14 1 Y 1 A THR 1306 A THR 15 1 Y 1 A GLU 1307 A GLU 16 1 Y 1 A ASN 1308 A ASN 17 1 Y 1 A LEU 1309 A LEU 18 1 Y 1 A TYR 1310 A TYR 19 1 Y 1 A PHE 1311 A PHE 20 1 Y 1 A GLN 1312 A GLN 21 1 Y 1 A SER 1313 A SER 22 1 Y 1 A MET 1314 A MET 23 1 Y 1 A SER 1315 A SER 24 1 Y 1 A ASN 1435 A ASN 144 1 Y 1 A THR 1436 A THR 145 1 Y 1 A ILE 1437 A ILE 146 1 Y 1 A THR 1438 A THR 147 1 Y 1 A LYS 1439 A LYS 148 1 Y 1 A ARG 1440 A ARG 149 1 Y 1 A A O O HOH HOH 1659 1703 1.99 97.080 22.6400 13.320 -0.6978 0.0000 -1.0170 -3.5974 0.0000 4.2951 0.9580 0.9490 0.2235 0.1894 0.1911 1.2420 30.1000 1539 30565 5.0400 88.5000 0.0540 RANDOM 1 THROUGHOUT 0.000 FOURIER SYNTHESIS 0.0610 0.0640 0.0590 3MB3 0.200 1.2420 30.1000 232 1233 37.34 33.41 11 0 990 119 381 SINUSOIDAL 2.000 190 HARMONIC 5.000 1061 HARMONIC 10.000 135 SEMIHARMONIC 5.000 1436 SEMIHARMONIC 4.000 0.008 1061 HARMONIC 2.000 0.840 1439 HARMONIC 2.000 3.220 13.830 0.2747 0.2851 1.2700 35 577 612 51 5.7200 26.7000 17.480 1.240 30.100 5RJP 30622 0.998 0.049 0.033 0.060 1 8.700 80456 2.600 3 88.900 0.849 1.240 1.310 2946 2425 0.492 0.797 1.168 1 0.400 1.200 49.300 0.034 3.930 30.100 3680 1154 0.998 0.022 0.040 1 30.100 3.200 99.400 refinement Gerard Bricogne buster-develop@GlobalPhasing.com http://www.globalphasing.com/buster/ BUSTER program 2.10.3 (29-NOV-2019) data scaling Phil Evans 13/12/18 http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html Aimless program 0.7.4 data extraction PDB deposit@deposit.rcsb.org SEP. 23, 2016 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.23 data reduction XDS program phasing REFMAC program PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with NCL-00024672 1 N N 2 N N 3 N N A ALA 1320 A ALA 29 HELX_P A CYS 1335 A CYS 44 1 AA1 16 A GLU 1336 A GLU 45 HELX_P A ARG 1342 A ARG 51 5 AA2 7 A ASP 1352 A ASP 61 HELX_P A ILE 1357 A ILE 66 1 AA3 6 A ASP 1362 A ASP 71 HELX_P A ALA 1372 A ALA 81 1 AA4 11 A SER 1377 A SER 86 HELX_P A THR 1396 A THR 105 1 AA5 20 A SER 1401 A SER 110 HELX_P A LYS 1433 A LYS 142 1 AA6 33 PROTEIN BINDING SGC - Diamond I04-1 fragment screening, PanDDA, XChemExplorer, Fragment-based drug design, SAMPL7, PROTEIN BINDING PHIP_HUMAN UNP 1 1315 Q8WWQ0 SYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKA YTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKR 1315 1440 5RJP 1315 1440 Q8WWQ0 A 1 24 149 1 initiating methionine MET 1292 5RJP A Q8WWQ0 UNP 1 1 expression tag HIS 1293 5RJP A Q8WWQ0 UNP 2 1 expression tag HIS 1294 5RJP A Q8WWQ0 UNP 3 1 expression tag HIS 1295 5RJP A Q8WWQ0 UNP 4 1 expression tag HIS 1296 5RJP A Q8WWQ0 UNP 5 1 expression tag HIS 1297 5RJP A Q8WWQ0 UNP 6 1 expression tag HIS 1298 5RJP A Q8WWQ0 UNP 7 1 expression tag SER 1299 5RJP A Q8WWQ0 UNP 8 1 expression tag SER 1300 5RJP A Q8WWQ0 UNP 9 1 expression tag GLY 1301 5RJP A Q8WWQ0 UNP 10 1 expression tag VAL 1302 5RJP A Q8WWQ0 UNP 11 1 expression tag ASP 1303 5RJP A Q8WWQ0 UNP 12 1 expression tag LEU 1304 5RJP A Q8WWQ0 UNP 13 1 expression tag GLY 1305 5RJP A Q8WWQ0 UNP 14 1 expression tag THR 1306 5RJP A Q8WWQ0 UNP 15 1 expression tag GLU 1307 5RJP A Q8WWQ0 UNP 16 1 expression tag ASN 1308 5RJP A Q8WWQ0 UNP 17 1 expression tag LEU 1309 5RJP A Q8WWQ0 UNP 18 1 expression tag TYR 1310 5RJP A Q8WWQ0 UNP 19 1 expression tag PHE 1311 5RJP A Q8WWQ0 UNP 20 1 expression tag GLN 1312 5RJP A Q8WWQ0 UNP 21 1 expression tag SER 1313 5RJP A Q8WWQ0 UNP 22 1 expression tag MET 1314 5RJP A Q8WWQ0 UNP 23 binding site for residue UUS A 1501 A UUS 1501 Software 11 A PRO 1340 A PRO 49 11 1_555 A VAL 1345 A VAL 54 11 1_555 A TYR 1350 A TYR 59 11 1_555 A SER 1392 A SER 101 11 1_555 A TYR 1395 A TYR 104 11 1_555 A THR 1396 A THR 105 11 1_555 A PRO 1397 A PRO 106 11 1_555 A SER 1401 A SER 110 11 1_555 A ILE 1403 A ILE 112 11 1_555 A HOH 1608 C HOH 11 1_555 A HOH 1610 C HOH 11 1_555 5 C 1 2 1