0.208333 0.000182 0.000029 0.000000 0.059137 0.000046 0.000000 0.000000 0.022002 0.00000 0.00000 0.00000 Colletier, J.P. Nasrallah, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.05 90.01 90.05 4.800 16.910 45.450 C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N C N 7 N C N 8 N O N 9 N O N 10 N O N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N N N 21 N C N 22 N C N 23 N O N 24 N O N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N O N 31 N H N 32 N H N 33 N N N 34 S C N 35 N C N 36 N O N 37 N C N 38 N O N 39 N O N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N N N 48 S C N 49 N C N 50 N O N 51 R C N 52 N O N 53 N C N 54 N O N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N N N 65 S C N 66 N C N 67 N O N 68 N C N 69 N C N 70 N C N 71 N O N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N doub N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N doub N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N doub N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing US Proc. Natl. Acad. Sci. U.S.A. PNASA6 0040 1091-6490 115 E2220 E2228 10.1073/pnas.1714582115 29476011 Porin self-association enables cell-to-cell contact in 2018 10.2210/pdb5n9i/pdb pdb_00005n9i 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2012-11-18 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.873 1.0 ID23-2 ESRF 0.873 SYNCHROTRON ESRF BEAMLINE ID23-2 590.624 Porin 1 DIMERIZATION DOMAIN, UNP residues 228-233 4 syn polymer 18.015 water 18 nat water no no GVVTSE GVVTSE A,B,C,D polypeptide(L) n n n n n n 1 1.62 23.9 Needles VAPOR DIFFUSION, HANGING DROP 4 2.5 M AMONIUM SULFATE, 0.1 M ACID CITRIC PH4 4 293 citation citation_author citation chem_comp_atom chem_comp_bond database_2 diffrn_radiation_wavelength pdbx_initial_refinement_model repository Initial release Database references Database references Data collection Database references Refinement description 1 0 2018-02-21 1 1 2018-03-07 1 2 2018-03-14 1 3 2024-05-01 _citation.journal_abbrev _citation.pdbx_database_id_PubMed _citation.title _citation_author.name _citation.journal_volume _citation.page_first _citation.page_last _database_2.pdbx_DOI _database_2.pdbx_database_accession France French National Research Agency ANR-15-CE18-0005-02 N PDBE Y PDBE 2017-02-24 REL REL HOH water 588 Providencia stuartii sample 1 6 a canonical beta-sheet other HOH 11 2 HOH HOH 101 A HOH 5 2 HOH HOH 102 A HOH 6 2 HOH HOH 103 A HOH 15 2 HOH HOH 104 A HOH 13 2 HOH HOH 105 A HOH 2 2 HOH HOH 101 B HOH 18 2 HOH HOH 102 B HOH 17 2 HOH HOH 103 B HOH 1 2 HOH HOH 104 B HOH 12 2 HOH HOH 105 B HOH 4 2 HOH HOH 101 C HOH 10 2 HOH HOH 102 C HOH 14 2 HOH HOH 103 C HOH 3 2 HOH HOH 104 C HOH 9 2 HOH HOH 101 D HOH 8 2 HOH HOH 102 D HOH 7 2 HOH HOH 103 D HOH 16 2 HOH HOH 104 D GLY 1 n 1 GLY 1 A VAL 2 n 2 VAL 2 A VAL 3 n 3 VAL 3 A THR 4 n 4 THR 4 A SER 5 n 5 SER 5 A GLU 6 n 6 GLU 6 A GLY 1 n 1 GLY 1 B VAL 2 n 2 VAL 2 B VAL 3 n 3 VAL 3 B THR 4 n 4 THR 4 B SER 5 n 5 SER 5 B GLU 6 n 6 GLU 6 B GLY 1 n 1 GLY 1 C VAL 2 n 2 VAL 2 C VAL 3 n 3 VAL 3 C THR 4 n 4 THR 4 C SER 5 n 5 SER 5 C GLU 6 n 6 GLU 6 C GLY 1 n 1 GLY 1 D VAL 2 n 2 VAL 2 D VAL 3 n 3 VAL 3 D THR 4 n 4 THR 4 D SER 5 n 5 SER 5 D GLU 6 n 6 GLU 6 D 1 0.298 2 0.198 3 0.288 4 0.216 software_defined_assembly PISA 4 tetrameric none 500 -2 2930 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A C OE2 OXT GLU GLU 6 6 2.12 12.675 -7.24 15.14 -15.62 24.21 -0.38 -16.97 0.975 0.951 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT 0.20590 0.14735 0.15705 1.91 45.45 168 890 15.9 92.24 4.112 0.111 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.066 0.039 0.80 0.80 1.20 a canonical beta-sheet MAXIMUM LIKELIHOOD MASK 1.91 45.45 18 182 0 0 164 0.018 0.020 160 2.229 2.026 216 8.322 5.000 20 56.565 30.000 4 17.174 15.000 24 0.138 0.200 32 0.007 0.020 112 0.532 0.208 1.956 10 88 20 96.08 15.748 1.91 50 5N9I 1076 3.0 0.991 0.1197 0.1088 0.1623 1 4.9 2.20 96.66 0.1879 1.91 1.979 3.24 122 0.973 0.169 0.2535 1 2.2 100 refinement REFMAC 5.7.0029 data reduction XDS data scaling XSCALE phasing PHASER N STRUCTURE OF 206-GVVTSE-211, THE STERIC ZIPPER THAT SUPPORTS THE SELF-ASSOCIATION OF P. STUARTII OMP-PST1 INTO DIMERS OF TRIMERS 1 N N 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N CELL ADHESION STERIC-ZIPPER, PORIN, MICRO-CRYSTAL, SELF-ASSOCIATION, cell adhesion E3U904_PROST UNP 1 228 E3U904 GVVTSE 228 233 5N9I 1 6 E3U904 A 1 1 6 228 233 5N9I 1 6 E3U904 B 1 1 6 228 233 5N9I 1 6 E3U904 C 1 1 6 228 233 5N9I 1 6 E3U904 D 1 1 6 1 P 1