0.014489 0.008365 0.000000 0.000000 0.016730 0.000000 0.000000 0.000000 0.009219 0.00000 0.00000 0.00000 Davies, D. Edwards, T. Gelinas, A. Jarvis, T. Clifton, M.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 69.020 69.020 108.470 C21 H22 N3 O9 P 491.388 2'-deoxy-5-[(naphthalen-1-ylmethyl)carbamoyl]uridine 5'-(dihydrogen phosphate) DNA linking C11 H16 N5 O7 P 361.248 n 2'-O-methyladenosine 5'-(dihydrogen phosphate) RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C17 H20 N3 O9 P 441.329 n 5-(benzylcarbamoyl)-2'-deoxyuridine 5'-(dihydrogen phosphate) DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C10 H16 N3 O8 P 337.223 n O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE RNA linking C11 H16 N5 O8 P 377.247 n O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE RNA linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C18 H22 N3 O9 P 455.356 n 2'-deoxy-5-[(2-phenylethyl)carbamoyl]uridine 5'-(dihydrogen phosphate) DNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 N C N 6 R C N 7 S C N 8 N C N 9 R C N 10 N O N 11 N N N 12 N C N 13 N C N 14 N C N 15 N O N 16 N N N 17 N C N 18 N O N 19 N C N 20 N N N 21 N C Y 22 N C Y 23 N C Y 24 N C Y 25 N C Y 26 N C Y 27 N C Y 28 N C Y 29 N C Y 30 N C Y 31 N C N 32 N O N 33 N O N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N O N 56 N H N 57 N P N 58 N O N 59 N O N 60 N O N 61 N C N 62 R C N 63 N O N 64 R C N 65 N O N 66 R C N 67 N O N 68 R C N 69 N C Y 70 N N Y 71 N C Y 72 N N Y 73 N C Y 74 N C N 75 N N Y 76 N N Y 77 N C Y 78 N N Y 79 N C N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N O N 96 N H N 97 N N N 98 S C N 99 N C N 100 N O N 101 N C N 102 N O N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N N N 111 S C N 112 N C N 113 N O N 114 N C N 115 N C N 116 N C N 117 N N N 118 N C N 119 N N N 120 N N N 121 N O N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C N 142 N C N 143 N O N 144 N N N 145 N O N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N N N 155 S C N 156 N C N 157 N O N 158 N C N 159 N C N 160 N O N 161 N O N 162 N O N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N N N 171 R C N 172 N C N 173 N O N 174 N C N 175 N S N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N O N 185 N P N 186 N O N 187 N O N 188 N O N 189 N C N 190 R C N 191 N O N 192 S C N 193 N O N 194 N C N 195 R C Y 196 N N Y 197 N C Y 198 N N Y 199 N C Y 200 N C N 201 N N Y 202 N N Y 203 N C Y 204 N N Y 205 N C N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N O N 221 N P N 222 N O N 223 N O N 224 N O N 225 N C N 226 R C N 227 N O N 228 S C N 229 N O N 230 N C N 231 R C N 232 N N N 233 N C N 234 N O N 235 N N N 236 N C N 237 N N N 238 N C N 239 N C N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N O N 255 N P N 256 N O N 257 N O N 258 N O N 259 N C N 260 R C N 261 N O N 262 S C N 263 N O N 264 N C N 265 R C Y 266 N N Y 267 N C Y 268 N N Y 269 N C N 270 N C N 271 N O N 272 N N N 273 N C N 274 N N N 275 N N Y 276 N C N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N P N 292 N N N 293 N C N 294 N O N 295 N N N 296 N C N 297 N O N 298 N C N 299 N C N 300 R C N 301 N C N 302 N C N 303 N O N 304 N N N 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N C Y 310 N C N 311 S C N 312 N O Y 313 N C N 314 R C N 315 N O N 316 N C N 317 N O N 318 N O N 319 N O N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N N N 342 S C N 343 N C N 344 N O N 345 N C N 346 N C N 347 N C N 348 N O N 349 N N N 350 N O N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C N 366 N C N 367 N C N 368 N O N 369 N O N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 N C N 382 N C N 383 N O N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 N C Y 395 N C Y 396 N N Y 397 N C Y 398 N C Y 399 N N N 400 N O N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N O N 412 N H N 413 N H N 414 N N N 415 S C N 416 N C N 417 N O N 418 S C N 419 N C N 420 N C N 421 N C N 422 N O N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N N N 437 S C N 438 N C N 439 N O N 440 N C N 441 N C N 442 N C N 443 N C N 444 N O N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N N N 459 S C N 460 N C N 461 N O N 462 N C N 463 N C N 464 N C N 465 N C N 466 N N N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N N N 484 S C N 485 N C N 486 N O N 487 N C N 488 N C N 489 N S N 490 N C N 491 N O N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N NA N 504 N N N 505 N C N 506 N N N 507 N C N 508 N C N 509 N C N 510 N O N 511 N N N 512 R C N 513 R C N 514 N O N 515 N C N 516 R C N 517 R C N 518 N O N 519 N O N 520 N C N 521 N O N 522 N P N 523 N O N 524 N O N 525 N O N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N P N 543 N O N 544 N O N 545 N O N 546 N O N 547 N C N 548 R C N 549 N O N 550 R C N 551 N O N 552 R C N 553 N O N 554 N C N 555 R C Y 556 N N Y 557 N C Y 558 N N Y 559 N C N 560 N C N 561 N O N 562 N N N 563 N C N 564 N N N 565 N N Y 566 N C N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N N N 584 S C N 585 N C N 586 N O N 587 N C Y 588 N C Y 589 N C Y 590 N C Y 591 N C Y 592 N C Y 593 N C N 594 N O N 595 N H N 596 N H N 597 N H N 598 N H N 599 N H N 600 N H N 601 N H N 602 N H N 603 N H N 604 N H N 605 N H N 606 N N N 607 S C N 608 N C N 609 N O N 610 N C N 611 N C N 612 N C N 613 N O N 614 N H N 615 N H N 616 N H N 617 N H N 618 N H N 619 N H N 620 N H N 621 N H N 622 N H N 623 N N N 624 S C N 625 N C N 626 N O N 627 N C N 628 N O N 629 N O N 630 N H N 631 N H N 632 N H N 633 N H N 634 N H N 635 N H N 636 N H N 637 N N N 638 S C N 639 N C N 640 N O N 641 R C N 642 N O N 643 N C N 644 N O N 645 N H N 646 N H N 647 N H N 648 N H N 649 N H N 650 N H N 651 N H N 652 N H N 653 N H N 654 N N N 655 S C N 656 N C N 657 N O N 658 N C Y 659 N C Y 660 N C Y 661 N C Y 662 N N Y 663 N C Y 664 N C Y 665 N C Y 666 N C Y 667 N C N 668 N O N 669 N H N 670 N H N 671 N H N 672 N H N 673 N H N 674 N H N 675 N H N 676 N H N 677 N H N 678 N H N 679 N H N 680 N H N 681 N N N 682 S C N 683 N C N 684 N O N 685 N C Y 686 N C Y 687 N C Y 688 N C Y 689 N C Y 690 N C Y 691 N C N 692 N O N 693 N O N 694 N H N 695 N H N 696 N H N 697 N H N 698 N H N 699 N H N 700 N H N 701 N H N 702 N H N 703 N H N 704 N H N 705 N P N 706 N N N 707 N C N 708 N O N 709 N N N 710 N C N 711 N O N 712 N C N 713 N C N 714 R C N 715 N C N 716 N C N 717 N O N 718 N N N 719 N C N 720 N C Y 721 N C Y 722 N C Y 723 N C Y 724 N C N 725 S C N 726 N O Y 727 N C Y 728 N C N 729 R C N 730 N O N 731 N C N 732 N O N 733 N O N 734 N O N 735 N O N 736 N H N 737 N H N 738 N H N 739 N H N 740 N H N 741 N H N 742 N H N 743 N H N 744 N H N 745 N H N 746 N H N 747 N H N 748 N H N 749 N H N 750 N H N 751 N H N 752 N H N 753 N H N 754 N H N 755 N H N 756 N H N 757 N H N 758 N N N 759 S C N 760 N C N 761 N O N 762 N C N 763 N C N 764 N C N 765 N O N 766 N H N 767 N H N 768 N H N 769 N H N 770 N H N 771 N H N 772 N H N 773 N H N 774 N H N 775 N H N 776 N H N 1 N doub Y 2 N doub Y 3 N sing N 4 N sing N 5 N sing N 6 N sing Y 7 N sing N 8 N doub N 9 N sing N 10 N sing N 11 N sing Y 12 N doub N 13 N sing N 14 N sing N 15 N sing N 16 N doub N 17 N sing N 18 N sing N 19 N sing Y 20 N doub Y 21 N sing Y 22 N sing Y 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing Y 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing Y 33 N doub Y 34 N sing N 35 N sing N 36 N doub N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing Y 85 N sing Y 86 N sing Y 87 N doub N 88 N sing Y 89 N sing Y 90 N sing Y 91 N doub N 92 N sing Y 93 N doub N 94 N sing N 95 N sing Y 96 N sing Y 97 N doub N 98 N sing Y 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing Y 207 N sing Y 208 N sing Y 209 N doub N 210 N sing Y 211 N sing Y 212 N sing Y 213 N doub N 214 N sing Y 215 N doub N 216 N sing N 217 N sing Y 218 N sing Y 219 N doub N 220 N sing Y 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing Y 280 N sing Y 281 N sing Y 282 N doub N 283 N sing Y 284 N sing N 285 N sing Y 286 N doub N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing Y 325 N doub Y 326 N sing Y 327 N doub N 328 N sing Y 329 N sing N 330 N sing Y 331 N doub N 332 N sing Y 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N doub N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing Y 405 N sing Y 406 N doub Y 407 N doub N 408 N sing Y 409 N sing N 410 N sing Y 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N doub N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N doub N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N doub N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N doub N 507 N doub N 508 N sing N 509 N sing N 510 N doub N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N doub N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N doub N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing Y 568 N sing Y 569 N sing Y 570 N doub N 571 N sing Y 572 N sing N 573 N sing Y 574 N doub N 575 N doub N 576 N sing N 577 N sing N 578 N sing N 579 N sing N 580 N doub N 581 N sing N 582 N sing N 583 N sing N 584 N sing N 585 N sing N 586 N sing N 587 N sing N 588 N sing N 589 N sing N 590 N doub N 591 N sing N 592 N sing N 593 N sing N 594 N sing Y 595 N doub Y 596 N sing Y 597 N sing N 598 N sing Y 599 N doub N 600 N sing Y 601 N doub N 602 N sing Y 603 N sing N 604 N sing N 605 N sing N 606 N sing N 607 N sing N 608 N sing N 609 N sing N 610 N sing N 611 N sing N 612 N sing N 613 N doub N 614 N sing N 615 N sing N 616 N sing N 617 N sing N 618 N sing N 619 N sing N 620 N sing N 621 N sing N 622 N sing N 623 N sing N 624 N sing N 625 N sing N 626 N sing N 627 N sing N 628 N sing N 629 N sing N 630 N doub N 631 N sing N 632 N sing N 633 N sing N 634 N sing N 635 N sing N 636 N sing N 637 N sing N 638 N sing N 639 N sing N 640 N sing N 641 N sing N 642 N sing N 643 N doub N 644 N sing N 645 N sing N 646 N sing N 647 N sing N 648 N sing N 649 N sing N 650 N sing N 651 N sing N 652 N sing N 653 N sing N 654 N sing N 655 N sing N 656 N sing N 657 N sing N 658 N sing N 659 N doub N 660 N sing N 661 N sing N 662 N sing N 663 N sing Y 664 N doub Y 665 N sing Y 666 N sing N 667 N sing Y 668 N doub Y 669 N sing Y 670 N sing N 671 N sing Y 672 N sing Y 673 N doub N 674 N sing Y 675 N doub N 676 N sing Y 677 N sing N 678 N sing N 679 N sing N 680 N sing N 681 N sing N 682 N sing N 683 N sing N 684 N sing N 685 N sing N 686 N sing N 687 N doub N 688 N sing N 689 N sing N 690 N sing N 691 N sing Y 692 N doub Y 693 N sing Y 694 N sing N 695 N sing Y 696 N doub N 697 N sing Y 698 N doub N 699 N sing Y 700 N sing N 701 N sing N 702 N sing N 703 N sing N 704 N sing N 705 N doub N 706 N sing N 707 N sing N 708 N sing N 709 N sing N 710 N sing N 711 N sing N 712 N doub N 713 N sing N 714 N sing N 715 N sing N 716 N doub N 717 N sing N 718 N doub N 719 N sing N 720 N sing N 721 N sing N 722 N sing N 723 N sing N 724 N sing N 725 N sing N 726 N sing N 727 N doub N 728 N sing N 729 N sing N 730 N sing N 731 N sing N 732 N sing N 733 N sing N 734 N sing N 735 N sing N 736 N sing Y 737 N doub Y 738 N sing Y 739 N doub N 740 N sing Y 741 N sing N 742 N sing Y 743 N doub N 744 N sing N 745 N sing N 746 N sing N 747 N sing N 748 N sing Y 749 N sing N 750 N sing N 751 N sing N 752 N sing N 753 N sing N 754 N sing N 755 N sing N 756 N sing N 757 N sing N 758 N sing N 759 N sing N 760 N sing N 761 N sing N 762 N sing N 763 N sing N 764 N sing N 765 N sing N 766 N doub N 767 N sing N 768 N sing N 769 N sing N 770 N sing N 771 N sing N 772 N sing N 773 N sing N 774 N sing N 775 N sing N 776 N sing N 777 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 289 8720 8734 10.1074/jbc.M113.532697 24415767 Crystal structure of interleukin-6 in complex with a modified nucleic Acid ligand. 2014 10.2210/pdb4ni9/pdb pdb_00004ni9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD 2010-11-18 MARMOSAIC 300 mm CCD SINGLE WAVELENGTH M x-ray 1 1.03318 1.0 21-ID-D APS 1.03318 1.03318 SYNCHROTRON APS BEAMLINE 21-ID-D 11402.860 SOMAmer SL1025 2 syn polymer 21137.156 Interleukin-6 2 man polymer 22.990 SODIUM ION 2 syn non-polymer 18.015 water 22 nat water IL-6, B-cell stimulatory factor 2, BSF-2, CTL differentiation factor, CDF, Hybridoma growth factor, Interferon beta-2, IFN-beta-2 no yes (DG)(DG)(OMC)(DA)(DG)(OMG)(DUZ)(DUZ)(UPE)(DG)(DG)(2JU)(DA)(DUZ)(DUZ)(A2M)(DA) (DC)(A2M)(OMC)(DG)(DUZ)(DUZ)(DA)(DA)(DG)(DUZ)(OMC)(DG)(DUZ)(DG)(DG) GGCAGGXXXGGXAXXAACACGXXAAGXCGXGG B,D polydeoxyribonucleotide no no MAPVPPGEDSKDVAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGF NEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWL QDMTTHLILRSFKEFLQSSLRALRQM MAPVPPGEDSKDVAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGF NEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWL QDMTTHLILRSFKEFLQSSLRALRQM A,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample IL6, IFNB2 9606 Homo sapiens 562 Escherichia coli 2.31 51.00 VAPOR DIFFUSION, SITTING DROP 5.5 31% PEG 3350, 90 mM Magnesium Sulfate, 90 mM Sodium Acetate (pH 5.5) 100 mM LiCl, VAPOR DIFFUSION, SITTING DROP, temperature 289K 289 -57.962 2 22 B 3 B 29 -146.169 B_OMC3:DG29_B 1 25.175 0.178 -0.396 -3.252 -29.612 3 6 B 31 B 2 87.802 B_DG31:DG2_B 2 3.621 -1.573 0.841 -3.158 26.503 3 6 B 11 B 5 -91.767 B_DG11:DG5_B 3 -2.605 1.738 0.031 3.336 -8.277 3 6 B 10 B 32 -92.091 B_DG10:DG32_B 4 -9.423 1.471 -0.116 3.251 -34.831 9 11 B 13 B 26 20.765 B_DA13:DG26_B 5 -10.987 -6.218 1.440 -3.812 -54.463 2 22 D 3 D 29 -158.861 D_OMC3:DG29_D 6 32.645 0.461 0.974 -3.081 -17.096 3 6 D 31 D 11 -95.778 D_DG31:DG11_D 7 -9.855 1.428 0.459 3.265 13.191 3 6 D 32 D 10 96.956 D_DG32:DG10_D 8 1.173 -1.570 -0.237 -3.192 -10.001 3 6 D 1 D 6 -96.109 D_DG1:OMG6_D 9 -12.747 1.395 0.570 3.055 -21.303 9 11 D 13 D 26 5.495 D_DA13:DG26_D 10 3.040 -6.810 0.749 -4.481 8.515 D 18 D 21 -73.633 D_DC18:DG21_D 11 -23.416 -0.815 0.048 3.271 1.266 149.631 B B 3 31 -51.501 B B 29 2 -0.895 -85.966 1.931 -4.992 BB_OMC3DG31:DG2DG29_BB 1 -122.462 73.365 2.673 -2.479 -1.154 0.066 -179.776 B B 31 11 4.306 B B 2 5 0.065 -8.613 1.643 3.348 BB_DG31DG11:DG5DG2_BB 2 -7.081 -3.541 -179.775 -1.674 0.821 -2.234 -162.270 D D 3 31 -15.360 D D 29 11 -0.514 28.081 -3.078 -4.906 DD_OMC3DG31:DG11DG29_DD 3 -159.616 -87.309 -17.187 2.690 -0.382 0.099 179.705 D D 31 32 -70.772 D D 11 10 0.048 -141.543 -0.915 -4.035 DD_DG31DG32:DG10DG11_DD 4 79.762 -39.882 178.062 -2.017 0.458 0.284 179.788 D D 32 1 2.288 D D 10 6 0.284 4.575 -1.855 -3.777 DD_DG32DG1:OMG6DG10_DD 5 -24.895 12.448 179.783 -1.888 0.927 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site pdbx_entry_details pdbx_modification_feature repository Initial release Database references Database references Structure summary Data collection Database references Derived calculations Refinement description Structure summary 1 0 2014-01-22 1 1 2014-02-12 1 2 2014-04-09 1 3 2016-06-01 1 4 2024-04-03 1 5 2024-10-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Different Crystal Form of Same complex RCSB Y RCSB 2013-11-05 REL REL NA SODIUM ION HOH water Y first crystal form Other experimental model A CYS 73 Disulfide bridge SG B CYS 75 A CYS 83 SG B CYS 85 1_555 1_555 None C CYS 73 Disulfide bridge SG C CYS 75 C CYS 83 SG C CYS 85 1_555 1_555 None NA 1 3 NA NA 101 B NA 2 3 NA NA 102 B HOH 4 4 HOH HOH 201 B HOH 8 4 HOH HOH 202 B HOH 9 4 HOH HOH 203 B HOH 10 4 HOH HOH 204 B HOH 22 4 HOH HOH 205 B HOH 1 4 HOH HOH 201 A HOH 2 4 HOH HOH 202 A HOH 3 4 HOH HOH 203 A HOH 5 4 HOH HOH 204 A HOH 6 4 HOH HOH 205 A HOH 7 4 HOH HOH 206 A HOH 20 4 HOH HOH 207 A HOH 21 4 HOH HOH 208 A HOH 12 4 HOH HOH 201 C HOH 13 4 HOH HOH 202 C HOH 14 4 HOH HOH 203 C HOH 16 4 HOH HOH 204 C HOH 19 4 HOH HOH 205 C HOH 11 4 HOH HOH 101 D HOH 15 4 HOH HOH 102 D HOH 17 4 HOH HOH 103 D HOH 18 4 HOH HOH 104 D G 1 n 1 DG 1 B G 2 n 2 DG 2 B OMC 3 n 3 OMC 3 B A 4 n 4 DA 4 B G 5 n 5 DG 5 B OMG 6 n 6 OMG 6 B BDU 7 n 7 DUZ 7 B BDU 8 n 8 DUZ 8 B PEU 9 n 9 UPE 9 B G 10 n 10 DG 10 B G 11 n 11 DG 11 B NDU 12 n 12 2JU 12 B A 13 n 13 DA 13 B BDU 14 n 14 DUZ 14 B BDU 15 n 15 DUZ 15 B A2M 16 n 16 A2M 16 B A 17 n 17 DA 17 B C 18 n 18 DC 18 B A2M 19 n 19 A2M 19 B OMC 20 n 20 OMC 20 B G 21 n 21 DG 21 B BDU 22 n 22 DUZ 22 B BDU 23 n 23 DUZ 23 B A 24 n 24 DA 24 B A 25 n 25 DA 25 B G 26 n 26 DG 26 B BDU 27 n 27 DUZ 27 B OMC 28 n 28 OMC 28 B G 29 n 29 DG 29 B BDU 30 n 30 DUZ 30 B G 31 n 31 DG 31 B G 32 n 32 DG 32 B n 1 -1 A n 2 0 A n 3 1 A n 4 2 A n 5 3 A n 6 4 A n 7 5 A n 8 6 A n 9 7 A n 10 8 A n 11 9 A n 12 10 A n 13 11 A n 14 12 A n 15 13 A PRO 14 n 16 PRO 14 A HIS 15 n 17 HIS 15 A ARG 16 n 18 ARG 16 A GLN 17 n 19 GLN 17 A PRO 18 n 20 PRO 18 A LEU 19 n 21 LEU 19 A THR 20 n 22 THR 20 A SER 21 n 23 SER 21 A SER 22 n 24 SER 22 A GLU 23 n 25 GLU 23 A ARG 24 n 26 ARG 24 A ILE 25 n 27 ILE 25 A ASP 26 n 28 ASP 26 A LYS 27 n 29 LYS 27 A GLN 28 n 30 GLN 28 A ILE 29 n 31 ILE 29 A ARG 30 n 32 ARG 30 A TYR 31 n 33 TYR 31 A ILE 32 n 34 ILE 32 A LEU 33 n 35 LEU 33 A ASP 34 n 36 ASP 34 A GLY 35 n 37 GLY 35 A ILE 36 n 38 ILE 36 A SER 37 n 39 SER 37 A ALA 38 n 40 ALA 38 A LEU 39 n 41 LEU 39 A ARG 40 n 42 ARG 40 A LYS 41 n 43 LYS 41 A GLU 42 n 44 GLU 42 A THR 43 n 45 THR 43 A n 46 44 A n 47 45 A n 48 46 A n 49 47 A n 50 48 A n 51 49 A n 52 50 A n 53 51 A n 54 52 A n 55 53 A n 56 54 A n 57 55 A n 58 56 A n 59 57 A n 60 58 A n 61 59 A n 62 60 A ASN 61 n 63 ASN 61 A LEU 62 n 64 LEU 62 A ASN 63 n 65 ASN 63 A LEU 64 n 66 LEU 64 A PRO 65 n 67 PRO 65 A LYS 66 n 68 LYS 66 A MET 67 n 69 MET 67 A ALA 68 n 70 ALA 68 A GLU 69 n 71 GLU 69 A LYS 70 n 72 LYS 70 A ASP 71 n 73 ASP 71 A GLY 72 n 74 GLY 72 A CYS 73 n 75 CYS 73 A PHE 74 n 76 PHE 74 A GLN 75 n 77 GLN 75 A SER 76 n 78 SER 76 A GLY 77 n 79 GLY 77 A PHE 78 n 80 PHE 78 A ASN 79 n 81 ASN 79 A GLU 80 n 82 GLU 80 A GLU 81 n 83 GLU 81 A THR 82 n 84 THR 82 A CYS 83 n 85 CYS 83 A LEU 84 n 86 LEU 84 A VAL 85 n 87 VAL 85 A LYS 86 n 88 LYS 86 A ILE 87 n 89 ILE 87 A ILE 88 n 90 ILE 88 A THR 89 n 91 THR 89 A GLY 90 n 92 GLY 90 A LEU 91 n 93 LEU 91 A LEU 92 n 94 LEU 92 A GLU 93 n 95 GLU 93 A PHE 94 n 96 PHE 94 A GLU 95 n 97 GLU 95 A VAL 96 n 98 VAL 96 A TYR 97 n 99 TYR 97 A LEU 98 n 100 LEU 98 A GLU 99 n 101 GLU 99 A TYR 100 n 102 TYR 100 A LEU 101 n 103 LEU 101 A GLN 102 n 104 GLN 102 A ASN 103 n 105 ASN 103 A ARG 104 n 106 ARG 104 A PHE 105 n 107 PHE 105 A GLU 106 n 108 GLU 106 A SER 107 n 109 SER 107 A SER 108 n 110 SER 108 A GLU 109 n 111 GLU 109 A GLU 110 n 112 GLU 110 A GLN 111 n 113 GLN 111 A ALA 112 n 114 ALA 112 A ARG 113 n 115 ARG 113 A ALA 114 n 116 ALA 114 A VAL 115 n 117 VAL 115 A GLN 116 n 118 GLN 116 A MET 117 n 119 MET 117 A SER 118 n 120 SER 118 A THR 119 n 121 THR 119 A LYS 120 n 122 LYS 120 A VAL 121 n 123 VAL 121 A LEU 122 n 124 LEU 122 A ILE 123 n 125 ILE 123 A GLN 124 n 126 GLN 124 A PHE 125 n 127 PHE 125 A LEU 126 n 128 LEU 126 A GLN 127 n 129 GLN 127 A LYS 128 n 130 LYS 128 A LYS 129 n 131 LYS 129 A ALA 130 n 132 ALA 130 A n 133 131 A n 134 132 A n 135 133 A n 136 134 A n 137 135 A n 138 136 A n 139 137 A n 140 138 A n 141 139 A n 142 140 A PRO 141 n 143 PRO 141 A THR 142 n 144 THR 142 A THR 143 n 145 THR 143 A ASN 144 n 146 ASN 144 A ALA 145 n 147 ALA 145 A SER 146 n 148 SER 146 A LEU 147 n 149 LEU 147 A LEU 148 n 150 LEU 148 A THR 149 n 151 THR 149 A LYS 150 n 152 LYS 150 A LEU 151 n 153 LEU 151 A GLN 152 n 154 GLN 152 A ALA 153 n 155 ALA 153 A GLN 154 n 156 GLN 154 A ASN 155 n 157 ASN 155 A GLN 156 n 158 GLN 156 A TRP 157 n 159 TRP 157 A LEU 158 n 160 LEU 158 A GLN 159 n 161 GLN 159 A ASP 160 n 162 ASP 160 A MET 161 n 163 MET 161 A THR 162 n 164 THR 162 A THR 163 n 165 THR 163 A HIS 164 n 166 HIS 164 A LEU 165 n 167 LEU 165 A ILE 166 n 168 ILE 166 A LEU 167 n 169 LEU 167 A ARG 168 n 170 ARG 168 A SER 169 n 171 SER 169 A PHE 170 n 172 PHE 170 A LYS 171 n 173 LYS 171 A GLU 172 n 174 GLU 172 A PHE 173 n 175 PHE 173 A LEU 174 n 176 LEU 174 A GLN 175 n 177 GLN 175 A SER 176 n 178 SER 176 A SER 177 n 179 SER 177 A LEU 178 n 180 LEU 178 A ARG 179 n 181 ARG 179 A ALA 180 n 182 ALA 180 A LEU 181 n 183 LEU 181 A ARG 182 n 184 ARG 182 A GLN 183 n 185 GLN 183 A MET 184 n 186 MET 184 A n 1 -1 C n 2 0 C n 3 1 C n 4 2 C n 5 3 C n 6 4 C n 7 5 C n 8 6 C n 9 7 C n 10 8 C n 11 9 C n 12 10 C n 13 11 C n 14 12 C n 15 13 C n 16 14 C n 17 15 C ARG 16 n 18 ARG 16 C GLN 17 n 19 GLN 17 C PRO 18 n 20 PRO 18 C LEU 19 n 21 LEU 19 C THR 20 n 22 THR 20 C SER 21 n 23 SER 21 C SER 22 n 24 SER 22 C GLU 23 n 25 GLU 23 C ARG 24 n 26 ARG 24 C ILE 25 n 27 ILE 25 C ASP 26 n 28 ASP 26 C LYS 27 n 29 LYS 27 C GLN 28 n 30 GLN 28 C ILE 29 n 31 ILE 29 C ARG 30 n 32 ARG 30 C TYR 31 n 33 TYR 31 C ILE 32 n 34 ILE 32 C LEU 33 n 35 LEU 33 C ASP 34 n 36 ASP 34 C GLY 35 n 37 GLY 35 C ILE 36 n 38 ILE 36 C SER 37 n 39 SER 37 C ALA 38 n 40 ALA 38 C LEU 39 n 41 LEU 39 C ARG 40 n 42 ARG 40 C LYS 41 n 43 LYS 41 C GLU 42 n 44 GLU 42 C THR 43 n 45 THR 43 C n 46 44 C n 47 45 C n 48 46 C n 49 47 C n 50 48 C n 51 49 C n 52 50 C n 53 51 C n 54 52 C n 55 53 C n 56 54 C n 57 55 C n 58 56 C n 59 57 C n 60 58 C n 61 59 C ASN 60 n 62 ASN 60 C ASN 61 n 63 ASN 61 C LEU 62 n 64 LEU 62 C ASN 63 n 65 ASN 63 C LEU 64 n 66 LEU 64 C PRO 65 n 67 PRO 65 C LYS 66 n 68 LYS 66 C MET 67 n 69 MET 67 C ALA 68 n 70 ALA 68 C GLU 69 n 71 GLU 69 C LYS 70 n 72 LYS 70 C ASP 71 n 73 ASP 71 C GLY 72 n 74 GLY 72 C CYS 73 n 75 CYS 73 C PHE 74 n 76 PHE 74 C GLN 75 n 77 GLN 75 C SER 76 n 78 SER 76 C GLY 77 n 79 GLY 77 C PHE 78 n 80 PHE 78 C ASN 79 n 81 ASN 79 C GLU 80 n 82 GLU 80 C GLU 81 n 83 GLU 81 C THR 82 n 84 THR 82 C CYS 83 n 85 CYS 83 C LEU 84 n 86 LEU 84 C VAL 85 n 87 VAL 85 C LYS 86 n 88 LYS 86 C ILE 87 n 89 ILE 87 C ILE 88 n 90 ILE 88 C THR 89 n 91 THR 89 C GLY 90 n 92 GLY 90 C LEU 91 n 93 LEU 91 C LEU 92 n 94 LEU 92 C GLU 93 n 95 GLU 93 C PHE 94 n 96 PHE 94 C GLU 95 n 97 GLU 95 C VAL 96 n 98 VAL 96 C TYR 97 n 99 TYR 97 C LEU 98 n 100 LEU 98 C GLU 99 n 101 GLU 99 C TYR 100 n 102 TYR 100 C LEU 101 n 103 LEU 101 C GLN 102 n 104 GLN 102 C ASN 103 n 105 ASN 103 C ARG 104 n 106 ARG 104 C PHE 105 n 107 PHE 105 C GLU 106 n 108 GLU 106 C SER 107 n 109 SER 107 C SER 108 n 110 SER 108 C GLU 109 n 111 GLU 109 C GLU 110 n 112 GLU 110 C GLN 111 n 113 GLN 111 C ALA 112 n 114 ALA 112 C ARG 113 n 115 ARG 113 C ALA 114 n 116 ALA 114 C VAL 115 n 117 VAL 115 C GLN 116 n 118 GLN 116 C MET 117 n 119 MET 117 C SER 118 n 120 SER 118 C THR 119 n 121 THR 119 C LYS 120 n 122 LYS 120 C VAL 121 n 123 VAL 121 C LEU 122 n 124 LEU 122 C ILE 123 n 125 ILE 123 C GLN 124 n 126 GLN 124 C PHE 125 n 127 PHE 125 C LEU 126 n 128 LEU 126 C GLN 127 n 129 GLN 127 C LYS 128 n 130 LYS 128 C LYS 129 n 131 LYS 129 C ALA 130 n 132 ALA 130 C n 133 131 C n 134 132 C n 135 133 C n 136 134 C n 137 135 C ILE 136 n 138 ILE 136 C THR 137 n 139 THR 137 C THR 138 n 140 THR 138 C PRO 139 n 141 PRO 139 C ASP 140 n 142 ASP 140 C PRO 141 n 143 PRO 141 C THR 142 n 144 THR 142 C THR 143 n 145 THR 143 C ASN 144 n 146 ASN 144 C ALA 145 n 147 ALA 145 C SER 146 n 148 SER 146 C LEU 147 n 149 LEU 147 C LEU 148 n 150 LEU 148 C THR 149 n 151 THR 149 C LYS 150 n 152 LYS 150 C LEU 151 n 153 LEU 151 C GLN 152 n 154 GLN 152 C ALA 153 n 155 ALA 153 C GLN 154 n 156 GLN 154 C ASN 155 n 157 ASN 155 C GLN 156 n 158 GLN 156 C TRP 157 n 159 TRP 157 C LEU 158 n 160 LEU 158 C GLN 159 n 161 GLN 159 C ASP 160 n 162 ASP 160 C MET 161 n 163 MET 161 C THR 162 n 164 THR 162 C THR 163 n 165 THR 163 C HIS 164 n 166 HIS 164 C LEU 165 n 167 LEU 165 C ILE 166 n 168 ILE 166 C LEU 167 n 169 LEU 167 C ARG 168 n 170 ARG 168 C SER 169 n 171 SER 169 C PHE 170 n 172 PHE 170 C LYS 171 n 173 LYS 171 C GLU 172 n 174 GLU 172 C PHE 173 n 175 PHE 173 C LEU 174 n 176 LEU 174 C GLN 175 n 177 GLN 175 C SER 176 n 178 SER 176 C SER 177 n 179 SER 177 C LEU 178 n 180 LEU 178 C ARG 179 n 181 ARG 179 C ALA 180 n 182 ALA 180 C LEU 181 n 183 LEU 181 C ARG 182 n 184 ARG 182 C GLN 183 n 185 GLN 183 C MET 184 n 186 MET 184 C G 1 n 1 DG 1 D G 2 n 2 DG 2 D OMC 3 n 3 OMC 3 D A 4 n 4 DA 4 D G 5 n 5 DG 5 D OMG 6 n 6 OMG 6 D BDU 7 n 7 DUZ 7 D BDU 8 n 8 DUZ 8 D PEU 9 n 9 UPE 9 D G 10 n 10 DG 10 D G 11 n 11 DG 11 D NDU 12 n 12 2JU 12 D A 13 n 13 DA 13 D BDU 14 n 14 DUZ 14 D BDU 15 n 15 DUZ 15 D A2M 16 n 16 A2M 16 D A 17 n 17 DA 17 D C 18 n 18 DC 18 D A2M 19 n 19 A2M 19 D OMC 20 n 20 OMC 20 D G 21 n 21 DG 21 D BDU 22 n 22 DUZ 22 D BDU 23 n 23 DUZ 23 D A 24 n 24 DA 24 D A 25 n 25 DA 25 D G 26 n 26 DG 26 D BDU 27 n 27 DUZ 27 D OMC 28 n 28 OMC 28 D G 29 n 29 DG 29 D BDU 30 n 30 DUZ 30 D G 31 n 31 DG 31 D G 32 n 32 DG 32 D 3.0944 -0.4514 -1.2787 2.5298 0.4803 4.2602 -0.0432 0.0969 -0.1090 -0.1613 -0.1215 0.1312 0.1168 -0.3845 0.1647 0.1244 -0.0268 0.0113 0.0426 -0.0220 0.1489 refined -2.8912 21.6939 8.0848 X-RAY DIFFRACTION 1.7856 1.9140 -0.0913 2.3282 -0.6574 1.6628 0.0544 -0.1290 -0.3909 -0.1840 -0.2326 -0.4672 0.3277 0.3122 0.1782 0.2006 0.0581 0.0642 0.0695 0.0320 0.2933 refined 13.9509 17.3950 6.3367 X-RAY DIFFRACTION 2.4488 -0.2494 0.7057 1.8553 -0.6379 4.7116 0.0053 -0.2053 0.1794 0.1709 -0.1364 -0.0760 -0.3869 -0.1148 0.1312 0.1221 -0.0551 -0.0765 0.0548 0.0272 0.1854 refined 13.3749 51.9400 14.2202 X-RAY DIFFRACTION 1.1759 1.2186 -1.5778 3.5182 -1.7165 1.8863 -0.0390 -0.1656 -0.1495 -0.0809 -0.1489 -0.5394 0.0303 0.1893 0.1880 0.0543 -0.0434 -0.0330 0.1419 0.1163 0.2753 refined 26.5111 39.0080 16.0717 X-RAY DIFFRACTION A 14 A 208 X-RAY DIFFRACTION 1 B 1 B 205 X-RAY DIFFRACTION 2 C 16 C 205 X-RAY DIFFRACTION 3 D 1 D 104 X-RAY DIFFRACTION 4 author_defined_assembly 4 tetrameric B DG 1 A O6 DG 1 1_555 B NA 102 F NA NA 1_555 B OMG 6 A O6 OMG 6 1_555 101.8 B DG 1 A O6 DG 1 1_555 B NA 102 F NA NA 1_555 B UPE 9 A O22 UPE 9 1_555 89.8 B OMG 6 A O6 OMG 6 1_555 B NA 102 F NA NA 1_555 B UPE 9 A O22 UPE 9 1_555 151.7 B DG 1 A O6 DG 1 1_555 B NA 102 F NA NA 1_555 B DG 10 A O6 DG 10 1_555 118.1 B OMG 6 A O6 OMG 6 1_555 B NA 102 F NA NA 1_555 B DG 10 A O6 DG 10 1_555 73.7 B UPE 9 A O22 UPE 9 1_555 B NA 102 F NA NA 1_555 B DG 10 A O6 DG 10 1_555 123.3 B DG 1 A O6 DG 1 1_555 B NA 102 F NA NA 1_555 B DG 32 A O6 DG 32 1_555 71.4 B OMG 6 A O6 OMG 6 1_555 B NA 102 F NA NA 1_555 B DG 32 A O6 DG 32 1_555 134.1 B UPE 9 A O22 UPE 9 1_555 B NA 102 F NA NA 1_555 B DG 32 A O6 DG 32 1_555 74.1 B DG 10 A O6 DG 10 1_555 B NA 102 F NA NA 1_555 B DG 32 A O6 DG 32 1_555 70.9 B DG 2 A O6 DG 2 1_555 B NA 101 E NA NA 1_555 B DG 5 A O6 DG 5 1_555 86.4 B DG 2 A O6 DG 2 1_555 B NA 101 E NA NA 1_555 B DG 10 A O6 DG 10 1_555 119.5 B DG 5 A O6 DG 5 1_555 B NA 101 E NA NA 1_555 B DG 10 A O6 DG 10 1_555 73.7 B DG 2 A O6 DG 2 1_555 B NA 101 E NA NA 1_555 B DG 11 A O6 DG 11 1_555 164.1 B DG 5 A O6 DG 5 1_555 B NA 101 E NA NA 1_555 B DG 11 A O6 DG 11 1_555 89.0 B DG 10 A O6 DG 10 1_555 B NA 101 E NA NA 1_555 B DG 11 A O6 DG 11 1_555 73.5 B DG 2 A O6 DG 2 1_555 B NA 101 E NA NA 1_555 B DG 31 A O6 DG 31 1_555 91.9 B DG 5 A O6 DG 5 1_555 B NA 101 E NA NA 1_555 B DG 31 A O6 DG 31 1_555 176.7 B DG 10 A O6 DG 10 1_555 B NA 101 E NA NA 1_555 B DG 31 A O6 DG 31 1_555 109.6 B DG 11 A O6 DG 11 1_555 B NA 101 E NA NA 1_555 B DG 31 A O6 DG 31 1_555 91.8 B OMC 3 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE A OMC 3 C B OMG 6 O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE A OMG 6 G B DUZ 7 A DUZ 7 DU B DUZ 8 A DUZ 8 DU B UPE 9 A UPE 9 DU B DUZ 14 A DUZ 14 DU B DUZ 15 A DUZ 15 DU B A2M 16 A A2M 16 A B A2M 19 A A2M 19 A B OMC 20 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE A OMC 20 C B DUZ 22 A DUZ 22 DU B DUZ 23 A DUZ 23 DU B DUZ 27 A DUZ 27 DU B OMC 28 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE A OMC 28 C B DUZ 30 A DUZ 30 DU D OMC 3 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE D OMC 3 C D OMG 6 O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE D OMG 6 G D DUZ 7 D DUZ 7 DU D DUZ 8 D DUZ 8 DU D UPE 9 D UPE 9 DU D DUZ 14 D DUZ 14 DU D DUZ 15 D DUZ 15 DU D A2M 16 D A2M 16 A D A2M 19 D A2M 19 A D OMC 20 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE D OMC 20 C D DUZ 22 D DUZ 22 DU D DUZ 23 D DUZ 23 DU D DUZ 27 D DUZ 27 DU D OMC 28 O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE D OMC 28 C D DUZ 30 D DUZ 30 DU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A CG HIS 15 B CG HIS 17 1 Y 1 A ND1 HIS 15 B ND1 HIS 17 1 Y 1 A CD2 HIS 15 B CD2 HIS 17 1 Y 1 A CE1 HIS 15 B CE1 HIS 17 1 Y 1 A NE2 HIS 15 B NE2 HIS 17 1 Y 1 A CG GLN 17 B CG GLN 19 1 Y 1 A CD GLN 17 B CD GLN 19 1 Y 1 A OE1 GLN 17 B OE1 GLN 19 1 Y 1 A NE2 GLN 17 B NE2 GLN 19 1 Y 1 A CG ARG 40 B CG ARG 42 1 Y 1 A CD ARG 40 B CD ARG 42 1 Y 1 A NE ARG 40 B NE ARG 42 1 Y 1 A CZ ARG 40 B CZ ARG 42 1 Y 1 A NH1 ARG 40 B NH1 ARG 42 1 Y 1 A NH2 ARG 40 B NH2 ARG 42 1 Y 1 A CG LYS 41 B CG LYS 43 1 Y 1 A CD LYS 41 B CD LYS 43 1 Y 1 A CE LYS 41 B CE LYS 43 1 Y 1 A NZ LYS 41 B NZ LYS 43 1 Y 1 A CG GLU 42 B CG GLU 44 1 Y 1 A CD GLU 42 B CD GLU 44 1 Y 1 A OE1 GLU 42 B OE1 GLU 44 1 Y 1 A OE2 GLU 42 B OE2 GLU 44 1 Y 1 A CG ASN 61 B CG ASN 63 1 Y 1 A OD1 ASN 61 B OD1 ASN 63 1 Y 1 A ND2 ASN 61 B ND2 ASN 63 1 Y 1 A CG ASN 63 B CG ASN 65 1 Y 1 A OD1 ASN 63 B OD1 ASN 65 1 Y 1 A ND2 ASN 63 B ND2 ASN 65 1 Y 1 A CG LYS 66 B CG LYS 68 1 Y 1 A CD LYS 66 B CD LYS 68 1 Y 1 A CE LYS 66 B CE LYS 68 1 Y 1 A NZ LYS 66 B NZ LYS 68 1 Y 1 A CG LYS 70 B CG LYS 72 1 Y 1 A CD LYS 70 B CD LYS 72 1 Y 1 A CE LYS 70 B CE LYS 72 1 Y 1 A NZ LYS 70 B NZ LYS 72 1 Y 1 A CG GLU 80 B CG GLU 82 1 Y 1 A CD GLU 80 B CD GLU 82 1 Y 1 A OE1 GLU 80 B OE1 GLU 82 1 Y 1 A OE2 GLU 80 B OE2 GLU 82 1 Y 1 A CG GLU 81 B CG GLU 83 1 Y 1 A CD GLU 81 B CD GLU 83 1 Y 1 A OE1 GLU 81 B OE1 GLU 83 1 Y 1 A OE2 GLU 81 B OE2 GLU 83 1 Y 1 A OG1 THR 82 B OG1 THR 84 1 Y 1 A CG2 THR 82 B CG2 THR 84 1 Y 1 A CG ASN 103 B CG ASN 105 1 Y 1 A OD1 ASN 103 B OD1 ASN 105 1 Y 1 A ND2 ASN 103 B ND2 ASN 105 1 Y 1 A CG GLU 106 B CG GLU 108 1 Y 1 A CD GLU 106 B CD GLU 108 1 Y 1 A OE1 GLU 106 B OE1 GLU 108 1 Y 1 A OE2 GLU 106 B OE2 GLU 108 1 Y 1 A CG LEU 147 B CG LEU 149 1 Y 1 A CD1 LEU 147 B CD1 LEU 149 1 Y 1 A CD2 LEU 147 B CD2 LEU 149 1 Y 1 A CG LYS 150 B CG LYS 152 1 Y 1 A CD LYS 150 B CD LYS 152 1 Y 1 A CE LYS 150 B CE LYS 152 1 Y 1 A NZ LYS 150 B NZ LYS 152 1 Y 1 A CG MET 161 B CG MET 163 1 Y 1 A SD MET 161 B SD MET 163 1 Y 1 A CE MET 161 B CE MET 163 1 Y 1 A CG MET 184 B CG MET 186 1 Y 1 A SD MET 184 B SD MET 186 1 Y 1 A CE MET 184 B CE MET 186 1 Y 1 C CG ARG 16 C CG ARG 18 1 Y 1 C CD ARG 16 C CD ARG 18 1 Y 1 C NE ARG 16 C NE ARG 18 1 Y 1 C CZ ARG 16 C CZ ARG 18 1 Y 1 C NH1 ARG 16 C NH1 ARG 18 1 Y 1 C NH2 ARG 16 C NH2 ARG 18 1 Y 1 C CG GLN 17 C CG GLN 19 1 Y 1 C CD GLN 17 C CD GLN 19 1 Y 1 C OE1 GLN 17 C OE1 GLN 19 1 Y 1 C NE2 GLN 17 C NE2 GLN 19 1 Y 1 C CG GLU 23 C CG GLU 25 1 Y 1 C CD GLU 23 C CD GLU 25 1 Y 1 C OE1 GLU 23 C OE1 GLU 25 1 Y 1 C OE2 GLU 23 C OE2 GLU 25 1 Y 1 C CG ARG 40 C CG ARG 42 1 Y 1 C CD ARG 40 C CD ARG 42 1 Y 1 C NE ARG 40 C NE ARG 42 1 Y 1 C CZ ARG 40 C CZ ARG 42 1 Y 1 C NH1 ARG 40 C NH1 ARG 42 1 Y 1 C NH2 ARG 40 C NH2 ARG 42 1 Y 1 C CG LYS 41 C CG LYS 43 1 Y 1 C CD LYS 41 C CD LYS 43 1 Y 1 C CE LYS 41 C CE LYS 43 1 Y 1 C NZ LYS 41 C NZ LYS 43 1 Y 1 C CG GLU 42 C CG GLU 44 1 Y 1 C CD GLU 42 C CD GLU 44 1 Y 1 C OE1 GLU 42 C OE1 GLU 44 1 Y 1 C OE2 GLU 42 C OE2 GLU 44 1 Y 1 C CG ASN 60 C CG ASN 62 1 Y 1 C OD1 ASN 60 C OD1 ASN 62 1 Y 1 C ND2 ASN 60 C ND2 ASN 62 1 Y 1 C CG ASN 61 C CG ASN 63 1 Y 1 C OD1 ASN 61 C OD1 ASN 63 1 Y 1 C ND2 ASN 61 C ND2 ASN 63 1 Y 1 C CG ASN 63 C CG ASN 65 1 Y 1 C OD1 ASN 63 C OD1 ASN 65 1 Y 1 C ND2 ASN 63 C ND2 ASN 65 1 Y 1 C CG LYS 66 C CG LYS 68 1 Y 1 C CD LYS 66 C CD LYS 68 1 Y 1 C CE LYS 66 C CE LYS 68 1 Y 1 C NZ LYS 66 C NZ LYS 68 1 Y 1 C CG GLU 69 C CG GLU 71 1 Y 1 C CD GLU 69 C CD GLU 71 1 Y 1 C OE1 GLU 69 C OE1 GLU 71 1 Y 1 C OE2 GLU 69 C OE2 GLU 71 1 Y 1 C CG LYS 70 C CG LYS 72 1 Y 1 C CD LYS 70 C CD LYS 72 1 Y 1 C CE LYS 70 C CE LYS 72 1 Y 1 C NZ LYS 70 C NZ LYS 72 1 Y 1 C CG GLN 75 C CG GLN 77 1 Y 1 C CD GLN 75 C CD GLN 77 1 Y 1 C OE1 GLN 75 C OE1 GLN 77 1 Y 1 C NE2 GLN 75 C NE2 GLN 77 1 Y 1 C CG GLU 80 C CG GLU 82 1 Y 1 C CD GLU 80 C CD GLU 82 1 Y 1 C OE1 GLU 80 C OE1 GLU 82 1 Y 1 C OE2 GLU 80 C OE2 GLU 82 1 Y 1 C CG GLU 81 C CG GLU 83 1 Y 1 C CD GLU 81 C CD GLU 83 1 Y 1 C OE1 GLU 81 C OE1 GLU 83 1 Y 1 C OE2 GLU 81 C OE2 GLU 83 1 Y 1 C CG ASN 103 C CG ASN 105 1 Y 1 C OD1 ASN 103 C OD1 ASN 105 1 Y 1 C ND2 ASN 103 C ND2 ASN 105 1 Y 1 C CG GLU 106 C CG GLU 108 1 Y 1 C CD GLU 106 C CD GLU 108 1 Y 1 C OE1 GLU 106 C OE1 GLU 108 1 Y 1 C OE2 GLU 106 C OE2 GLU 108 1 Y 1 C CG1 ILE 136 C CG1 ILE 138 1 Y 1 C CG2 ILE 136 C CG2 ILE 138 1 Y 1 C CD1 ILE 136 C CD1 ILE 138 1 Y 1 C CG ASP 140 C CG ASP 142 1 Y 1 C OD1 ASP 140 C OD1 ASP 142 1 Y 1 C OD2 ASP 140 C OD2 ASP 142 1 Y 1 C CG MET 161 C CG MET 163 1 Y 1 C SD MET 161 C SD MET 163 1 Y 1 C CE MET 161 C CE MET 163 1 Y 1 C CG MET 184 C CG MET 186 1 Y 1 C SD MET 184 C SD MET 186 1 Y 1 C CE MET 184 C CE MET 186 1 Y 1 A MET -1 B MET 1 1 Y 1 A ALA 0 B ALA 2 1 Y 1 A PRO 1 B PRO 3 1 Y 1 A VAL 2 B VAL 4 1 Y 1 A PRO 3 B PRO 5 1 Y 1 A PRO 4 B PRO 6 1 Y 1 A GLY 5 B GLY 7 1 Y 1 A GLU 6 B GLU 8 1 Y 1 A ASP 7 B ASP 9 1 Y 1 A SER 8 B SER 10 1 Y 1 A LYS 9 B LYS 11 1 Y 1 A ASP 10 B ASP 12 1 Y 1 A VAL 11 B VAL 13 1 Y 1 A ALA 12 B ALA 14 1 Y 1 A ALA 13 B ALA 15 1 Y 1 A CYS 44 B CYS 46 1 Y 1 A ASN 45 B ASN 47 1 Y 1 A LYS 46 B LYS 48 1 Y 1 A SER 47 B SER 49 1 Y 1 A ASN 48 B ASN 50 1 Y 1 A MET 49 B MET 51 1 Y 1 A CYS 50 B CYS 52 1 Y 1 A GLU 51 B GLU 53 1 Y 1 A SER 52 B SER 54 1 Y 1 A SER 53 B SER 55 1 Y 1 A LYS 54 B LYS 56 1 Y 1 A GLU 55 B GLU 57 1 Y 1 A ALA 56 B ALA 58 1 Y 1 A LEU 57 B LEU 59 1 Y 1 A ALA 58 B ALA 60 1 Y 1 A GLU 59 B GLU 61 1 Y 1 A ASN 60 B ASN 62 1 Y 1 A LYS 131 B LYS 133 1 Y 1 A ASN 132 B ASN 134 1 Y 1 A LEU 133 B LEU 135 1 Y 1 A ASP 134 B ASP 136 1 Y 1 A ALA 135 B ALA 137 1 Y 1 A ILE 136 B ILE 138 1 Y 1 A THR 137 B THR 139 1 Y 1 A THR 138 B THR 140 1 Y 1 A PRO 139 B PRO 141 1 Y 1 A ASP 140 B ASP 142 1 Y 1 C MET -1 C MET 1 1 Y 1 C ALA 0 C ALA 2 1 Y 1 C PRO 1 C PRO 3 1 Y 1 C VAL 2 C VAL 4 1 Y 1 C PRO 3 C PRO 5 1 Y 1 C PRO 4 C PRO 6 1 Y 1 C GLY 5 C GLY 7 1 Y 1 C GLU 6 C GLU 8 1 Y 1 C ASP 7 C ASP 9 1 Y 1 C SER 8 C SER 10 1 Y 1 C LYS 9 C LYS 11 1 Y 1 C ASP 10 C ASP 12 1 Y 1 C VAL 11 C VAL 13 1 Y 1 C ALA 12 C ALA 14 1 Y 1 C ALA 13 C ALA 15 1 Y 1 C PRO 14 C PRO 16 1 Y 1 C HIS 15 C HIS 17 1 Y 1 C CYS 44 C CYS 46 1 Y 1 C ASN 45 C ASN 47 1 Y 1 C LYS 46 C LYS 48 1 Y 1 C SER 47 C SER 49 1 Y 1 C ASN 48 C ASN 50 1 Y 1 C MET 49 C MET 51 1 Y 1 C CYS 50 C CYS 52 1 Y 1 C GLU 51 C GLU 53 1 Y 1 C SER 52 C SER 54 1 Y 1 C SER 53 C SER 55 1 Y 1 C LYS 54 C LYS 56 1 Y 1 C GLU 55 C GLU 57 1 Y 1 C ALA 56 C ALA 58 1 Y 1 C LEU 57 C LEU 59 1 Y 1 C ALA 58 C ALA 60 1 Y 1 C GLU 59 C GLU 61 1 Y 1 C LYS 131 C LYS 133 1 Y 1 C ASN 132 C ASN 134 1 Y 1 C LEU 133 C LEU 135 1 Y 1 C ASP 134 C ASP 136 1 Y 1 C ALA 135 C ALA 137 1 Y 1 3.55 0.30 108.30 111.85 B B B O4' C1' N9 DG DG DG 2 2 2 N 1 13.64 1.20 119.70 133.34 B B B C3' O3' P DUZ DUZ UPE 8 8 9 Y 1 -17.69 1.90 104.00 86.31 B B B O3' P O5' DUZ UPE UPE 8 9 9 Y 1 -12.27 1.90 104.00 91.73 B B B O3' P O5' DG 2JU 2JU 11 12 12 Y 1 -35.24 2.20 105.20 69.96 B B B O3' P OP1 DUZ A2M A2M 15 16 16 Y 1 12.59 1.20 119.70 132.29 B B B C3' O3' P A2M A2M DA 16 16 17 Y 1 3.17 0.30 108.30 111.47 B B B O4' C1' N9 DA DA DA 17 17 17 N 1 -36.12 2.20 105.20 69.08 B B B O3' P OP2 DC A2M A2M 18 19 19 Y 1 3.79 0.30 108.30 112.09 B B B O4' C1' N9 DG DG DG 21 21 21 N 1 10.41 1.20 119.70 130.11 B B B C3' O3' P DUZ DUZ DUZ 22 22 23 Y 1 10.21 1.20 119.70 129.91 B B B C3' O3' P DUZ DUZ DA 23 23 24 Y 1 3.54 0.30 108.30 111.84 B B B O4' C1' N9 DA DA DA 25 25 25 N 1 3.32 0.30 108.30 111.62 B B B O4' C1' N9 DG DG DG 31 31 31 N 1 7.67 0.30 108.30 115.97 D D D O4' C1' N9 DG DG DG 2 2 2 N 1 -12.15 1.90 104.00 91.85 D D D O3' P O5' DUZ UPE UPE 8 9 9 Y 1 -16.20 1.90 104.00 87.80 D D D O3' P O5' DG 2JU 2JU 11 12 12 Y 1 7.98 1.20 119.70 127.68 D D D C3' O3' P DUZ DUZ A2M 15 15 16 Y 1 -46.06 2.20 105.20 59.14 D D D O3' P OP2 DUZ A2M A2M 15 16 16 Y 1 6.13 0.30 108.30 114.43 D D D O4' C1' N9 DA DA DA 17 17 17 N 1 2.23 0.30 108.30 110.53 D D D O4' C1' N1 DC DC DC 18 18 18 N 1 -15.92 2.20 105.20 89.28 D D D O3' P OP2 DC A2M A2M 18 19 19 Y 1 -26.25 2.20 105.20 78.95 D D D O3' P OP1 DC A2M A2M 18 19 19 Y 1 7.26 1.20 119.70 126.96 D D D C3' O3' P DUZ DUZ DUZ 22 22 23 Y 1 2.97 0.30 108.30 111.27 D D D O4' C1' N9 DA DA DA 25 25 25 N 1 6.61 0.30 108.30 114.91 D D D O4' C1' N9 DG DG DG 26 26 26 N 1 A ARG 16 -177.88 130.96 1 A GLU 42 -91.79 35.17 1 A ASN 63 -117.85 64.05 1 A PRO 65 -37.51 113.65 1 A ASN 79 -160.02 108.68 1 A ASN 103 -75.51 34.49 1 A PHE 105 -116.70 58.67 1 A GLU 106 -59.13 12.64 1 A LYS 129 -29.29 -45.67 1 A ARG 182 -69.80 12.82 1 A GLN 183 -134.12 -48.90 1 C GLN 75 -37.89 -39.84 1 C ASN 79 -163.29 113.73 1 C PHE 105 -140.75 55.12 1 C SER 108 -153.47 51.64 1 C GLN 183 -136.44 -47.72 57.29 7.36000 0.00000 0.00000 7.36000 0.00000 -14.72000 0.956 0.928 HYDROGENS HAVE BEEN ADDED IN THE 0.239 0.186 0.189 2.55 50.0 963 18789 5.100 24.026 0.221 RANDOM 1 THROUGHOUT 0.000 MR 0.122 0.061 0.80 0.80 1.40 first crystal form MAXIMUM LIKELIHOOD MASK 2.55 50.0 22 3793 2 1538 2231 0.008 0.021 3983 1.845 2.446 5659 4.798 5.000 286 42.118 24.130 92 16.897 15.000 394 20.515 15.000 15 0.124 0.200 636 0.004 0.020 2579 0.372 1.500 1456 0.695 2.000 2310 0.941 3.000 2527 1.493 4.500 3349 1 A 1 1073 X-RAY DIFFRACTION loose positional 0.460 5.000 2 C 2 769 X-RAY DIFFRACTION loose positional 0.410 5.000 1 B 1 1073 X-RAY DIFFRACTION loose thermal 1.390 10.000 2 D 2 769 X-RAY DIFFRACTION loose thermal 2.740 10.000 0.2590 0.2520 2.62 69 1291 20 97.70 67.12 2.550 50 4NI9 18817 -3.000 0.05300 1 22.6100 7.0 99.7 0.52200 2.55 2.62 4.000 1 7.1 100.0 phasing PHASER refinement REFMAC 5.5.0109 data reduction XDS data scaling XSCALE Crystal structure of human interleukin 6 in complex with a modified nucleotide aptamer (SOMAMER SL1025), FORM 2 1 N N 2 N N 2 N N 1 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N BIOMOLECULE: NULL SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON BURIED SURFACE AREA. REMARK: MONOMER A THR 20 B THR 22 HELX_P A LYS 41 B LYS 43 1 1 22 A ALA 68 B ALA 70 HELX_P A GLY 72 B GLY 74 5 2 5 A ASN 79 B ASN 81 HELX_P A ASN 103 B ASN 105 1 3 25 A SER 108 B SER 110 HELX_P A ALA 130 B ALA 132 1 4 23 A THR 142 B THR 144 HELX_P A GLN 152 B GLN 154 1 5 11 A ASN 155 B ASN 157 HELX_P A ARG 182 B ARG 184 1 6 28 C THR 20 C THR 22 HELX_P C THR 43 C THR 45 1 7 24 C ALA 68 C ALA 70 HELX_P C GLY 72 C GLY 74 5 8 5 C ASN 79 C ASN 81 HELX_P C TYR 100 C TYR 102 1 9 22 C LEU 101 C LEU 103 HELX_P C GLU 106 C GLU 108 5 10 6 C SER 108 C SER 110 HELX_P C LYS 129 C LYS 131 1 11 22 C THR 143 C THR 145 HELX_P C GLN 152 C GLN 154 1 12 10 C ASN 155 C ASN 157 HELX_P C ARG 182 C ARG 184 1 13 28 disulf 2.038 A CYS 73 B SG CYS 75 1_555 A CYS 83 B SG CYS 85 1_555 disulf 2.033 C CYS 73 C SG CYS 75 1_555 C CYS 83 C SG CYS 85 1_555 covale 1.598 both B DG 2 A O3' DG 2 1_555 B OMC 3 A P OMC 3 1_555 covale 1.612 both B OMC 3 A O3' OMC 3 1_555 B DA 4 A P DA 4 1_555 covale 1.596 both B DG 5 A O3' DG 5 1_555 B OMG 6 A P OMG 6 1_555 covale 1.604 both B OMG 6 A O3' OMG 6 1_555 B DUZ 7 A P DUZ 7 1_555 covale 1.614 one B DUZ 7 A O3' DUZ 7 1_555 B DUZ 8 A P DUZ 8 1_555 covale 1.606 one B DUZ 8 A O3' DUZ 8 1_555 B UPE 9 A P UPE 9 1_555 covale 1.596 one B UPE 9 A O3' UPE 9 1_555 B DG 10 A P DG 10 1_555 covale 1.603 both B DG 11 A O3' DG 11 1_555 B 2JU 12 A P 2JU 12 1_555 covale 1.591 one B 2JU 12 A O3' 2JU 12 1_555 B DA 13 A P DA 13 1_555 covale 1.606 both B DA 13 A O3' DA 13 1_555 B DUZ 14 A P DUZ 14 1_555 covale 1.606 one B DUZ 14 A O3' DUZ 14 1_555 B DUZ 15 A P DUZ 15 1_555 covale 1.607 one B DUZ 15 A O3' DUZ 15 1_555 B A2M 16 A P A2M 16 1_555 covale 1.623 one B A2M 16 A O3' A2M 16 1_555 B DA 17 A P DA 17 1_555 covale 1.607 both B DC 18 A O3' DC 18 1_555 B A2M 19 A P A2M 19 1_555 covale 1.599 one B A2M 19 A O3' A2M 19 1_555 B OMC 20 A P OMC 20 1_555 covale 1.610 both B OMC 20 A O3' OMC 20 1_555 B DG 21 A P DG 21 1_555 covale 1.612 both B DG 21 A O3' DG 21 1_555 B DUZ 22 A P DUZ 22 1_555 covale 1.608 one B DUZ 22 A O3' DUZ 22 1_555 B DUZ 23 A P DUZ 23 1_555 covale 1.607 one B DUZ 23 A O3' DUZ 23 1_555 B DA 24 A P DA 24 1_555 covale 1.602 both B DG 26 A O3' DG 26 1_555 B DUZ 27 A P DUZ 27 1_555 covale 1.602 one B DUZ 27 A O3' DUZ 27 1_555 B OMC 28 A P OMC 28 1_555 covale 1.588 both B OMC 28 A O3' OMC 28 1_555 B DG 29 A P DG 29 1_555 covale 1.599 both B DG 29 A O3' DG 29 1_555 B DUZ 30 A P DUZ 30 1_555 covale 1.607 one B DUZ 30 A O3' DUZ 30 1_555 B DG 31 A P DG 31 1_555 covale 1.603 both D DG 2 D O3' DG 2 1_555 D OMC 3 D P OMC 3 1_555 covale 1.614 both D OMC 3 D O3' OMC 3 1_555 D DA 4 D P DA 4 1_555 covale 1.617 both D DG 5 D O3' DG 5 1_555 D OMG 6 D P OMG 6 1_555 covale 1.601 both D OMG 6 D O3' OMG 6 1_555 D DUZ 7 D P DUZ 7 1_555 covale 1.613 one D DUZ 7 D O3' DUZ 7 1_555 D DUZ 8 D P DUZ 8 1_555 covale 1.621 one D DUZ 8 D O3' DUZ 8 1_555 D UPE 9 D P UPE 9 1_555 covale 1.614 one D UPE 9 D O3' UPE 9 1_555 D DG 10 D P DG 10 1_555 covale 1.617 both D DG 11 D O3' DG 11 1_555 D 2JU 12 D P 2JU 12 1_555 covale 1.596 one D 2JU 12 D O3' 2JU 12 1_555 D DA 13 D P DA 13 1_555 covale 1.599 both D DA 13 D O3' DA 13 1_555 D DUZ 14 D P DUZ 14 1_555 covale 1.602 one D DUZ 14 D O3' DUZ 14 1_555 D DUZ 15 D P DUZ 15 1_555 covale 1.611 one D DUZ 15 D O3' DUZ 15 1_555 D A2M 16 D P A2M 16 1_555 covale 1.607 one D A2M 16 D O3' A2M 16 1_555 D DA 17 D P DA 17 1_555 covale 1.612 both D DC 18 D O3' DC 18 1_555 D A2M 19 D P A2M 19 1_555 covale 1.596 one D A2M 19 D O3' A2M 19 1_555 D OMC 20 D P OMC 20 1_555 covale 1.609 both D OMC 20 D O3' OMC 20 1_555 D DG 21 D P DG 21 1_555 covale 1.600 both D DG 21 D O3' DG 21 1_555 D DUZ 22 D P DUZ 22 1_555 covale 1.607 one D DUZ 22 D O3' DUZ 22 1_555 D DUZ 23 D P DUZ 23 1_555 covale 1.611 one D DUZ 23 D O3' DUZ 23 1_555 D DA 24 D P DA 24 1_555 covale 1.600 both D DG 26 D O3' DG 26 1_555 D DUZ 27 D P DUZ 27 1_555 covale 1.610 one D DUZ 27 D O3' DUZ 27 1_555 D OMC 28 D P OMC 28 1_555 covale 1.602 both D OMC 28 D O3' OMC 28 1_555 D DG 29 D P DG 29 1_555 covale 1.595 both D DG 29 D O3' DG 29 1_555 D DUZ 30 D P DUZ 30 1_555 covale 1.598 one D DUZ 30 D O3' DUZ 30 1_555 D DG 31 D P DG 31 1_555 metalc 2.606 B DG 1 A O6 DG 1 1_555 B NA 102 F NA NA 1_555 metalc 2.250 B DG 2 A O6 DG 2 1_555 B NA 101 E NA NA 1_555 metalc 2.477 B DG 5 A O6 DG 5 1_555 B NA 101 E NA NA 1_555 metalc 2.356 B OMG 6 A O6 OMG 6 1_555 B NA 102 F NA NA 1_555 metalc 2.268 B UPE 9 A O22 UPE 9 1_555 B NA 102 F NA NA 1_555 metalc 2.732 B DG 10 A O6 DG 10 1_555 B NA 101 E NA NA 1_555 metalc 2.688 B DG 10 A O6 DG 10 1_555 B NA 102 F NA NA 1_555 metalc 2.310 B DG 11 A O6 DG 11 1_555 B NA 101 E NA NA 1_555 metalc 2.173 B DG 31 A O6 DG 31 1_555 B NA 101 E NA NA 1_555 metalc 2.524 B DG 32 A O6 DG 32 1_555 B NA 102 F NA NA 1_555 hydrog TYPE_6_PAIR B DG 1 A N1 DG 1 1_555 B OMG 6 A O6 OMG 6 1_555 hydrog TYPE_6_PAIR B DG 1 A N2 DG 1 1_555 B OMG 6 A N7 OMG 6 1_555 hydrog TYPE_6_PAIR B DG 1 A N7 DG 1 1_555 B DG 32 A N2 DG 32 1_555 hydrog TYPE_6_PAIR B DG 1 A O6 DG 1 1_555 B DG 32 A N1 DG 32 1_555 hydrog TYPE_6_PAIR B DG 2 A N7 DG 2 1_555 B DG 5 A N2 DG 5 1_555 hydrog TYPE_6_PAIR B DG 2 A O6 DG 2 1_555 B DG 5 A N1 DG 5 1_555 hydrog TYPE_6_PAIR B DG 2 A N1 DG 2 1_555 B DG 31 A O6 DG 31 1_555 hydrog TYPE_6_PAIR B DG 2 A N2 DG 2 1_555 B DG 31 A N7 DG 31 1_555 hydrog REVERSED WATSON-CRICK B OMC 3 A N3 OMC 3 1_555 B DG 29 A N2 DG 29 1_555 hydrog REVERSED WATSON-CRICK B OMC 3 A O2 OMC 3 1_555 B DG 29 A N1 DG 29 1_555 hydrog TYPE_6_PAIR B DG 5 A N7 DG 5 1_555 B DG 11 A N2 DG 11 1_555 hydrog TYPE_6_PAIR B DG 5 A O6 DG 5 1_555 B DG 11 A N1 DG 11 1_555 hydrog TYPE_6_PAIR B OMG 6 A N1 OMG 6 1_555 B DG 10 A O6 DG 10 1_555 hydrog TYPE_6_PAIR B OMG 6 A N2 OMG 6 1_555 B DG 10 A N7 DG 10 1_555 hydrog TYPE_6_PAIR B DG 10 A N1 DG 10 1_555 B DG 32 A O6 DG 32 1_555 hydrog TYPE_6_PAIR B DG 10 A N2 DG 10 1_555 B DG 32 A N7 DG 32 1_555 hydrog TYPE_6_PAIR B DG 11 A N7 DG 11 1_555 B DG 31 A N2 DG 31 1_555 hydrog TYPE_6_PAIR B DG 11 A O6 DG 11 1_555 B DG 31 A N1 DG 31 1_555 hydrog TYPE_11_PAIR B DA 13 A N6 DA 13 1_555 B DG 26 A N3 DG 26 1_555 hydrog TYPE_11_PAIR B DA 13 A N7 DA 13 1_555 B DG 26 A N2 DG 26 1_555 hydrog TYPE_6_PAIR D DG 1 D N1 DG 1 1_555 D OMG 6 D O6 OMG 6 1_555 hydrog TYPE_6_PAIR D DG 1 D N2 DG 1 1_555 D OMG 6 D N7 OMG 6 1_555 hydrog TYPE_6_PAIR D DG 1 D N7 DG 1 1_555 D DG 32 D N2 DG 32 1_555 hydrog TYPE_6_PAIR D DG 1 D O6 DG 1 1_555 D DG 32 D N1 DG 32 1_555 hydrog TYPE_6_PAIR D DG 2 D N7 DG 2 1_555 D DG 5 D N2 DG 5 1_555 hydrog TYPE_6_PAIR D DG 2 D O6 DG 2 1_555 D DG 5 D N1 DG 5 1_555 hydrog TYPE_6_PAIR D DG 2 D N1 DG 2 1_555 D DG 31 D O6 DG 31 1_555 hydrog TYPE_6_PAIR D DG 2 D N2 DG 2 1_555 D DG 31 D N7 DG 31 1_555 hydrog REVERSED WATSON-CRICK D OMC 3 D N3 OMC 3 1_555 D DG 29 D N2 DG 29 1_555 hydrog REVERSED WATSON-CRICK D OMC 3 D O2 OMC 3 1_555 D DG 29 D N1 DG 29 1_555 hydrog DA-DG MISPAIR D DA 4 D N6 DA 4 1_555 D DG 31 D O6 DG 31 1_555 hydrog TYPE_6_PAIR D DG 5 D N7 DG 5 1_555 D DG 11 D N2 DG 11 1_555 hydrog TYPE_6_PAIR D DG 5 D O6 DG 5 1_555 D DG 11 D N1 DG 11 1_555 hydrog TYPE_6_PAIR D OMG 6 D N1 OMG 6 1_555 D DG 10 D O6 DG 10 1_555 hydrog TYPE_6_PAIR D OMG 6 D N2 OMG 6 1_555 D DG 10 D N7 DG 10 1_555 hydrog TYPE_6_PAIR D DG 10 D N1 DG 10 1_555 D DG 32 D O6 DG 32 1_555 hydrog TYPE_6_PAIR D DG 10 D N2 DG 10 1_555 D DG 32 D N7 DG 32 1_555 hydrog TYPE_6_PAIR D DG 11 D N7 DG 11 1_555 D DG 31 D N2 DG 31 1_555 hydrog TYPE_6_PAIR D DG 11 D O6 DG 11 1_555 D DG 31 D N1 DG 31 1_555 hydrog TYPE_11_PAIR D DA 13 D N6 DA 13 1_555 D DG 26 D N3 DG 26 1_555 hydrog TYPE_11_PAIR D DA 13 D N7 DA 13 1_555 D DG 26 D N2 DG 26 1_555 hydrog DC-DG PAIR D DC 18 D N4 DC 18 1_555 D DG 21 D O6 DG 21 1_555 CYTOKINE/DNA SELEX, SOMAMER, CYTOKINE-DNA complex A C B D A 14 A 184 6 C 14 C 184 6 B 1 B 32 6 D 1 D 32 6 IL6_HUMAN UNP 2 28 P05231 APVPPGEDSKDVAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFN EETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWLQ DMTTHLILRSFKEFLQSSLRALRQM 4NI9 PDB 1 4NI9 28 212 4NI9 0 184 P05231 A 1 2 186 28 212 4NI9 0 184 P05231 C 1 2 186 1 32 4NI9 1 32 4NI9 B 2 1 32 1 32 4NI9 1 32 4NI9 D 2 1 32 1 initiating methionine MET -1 4NI9 A P05231 UNP 1 2 initiating methionine MET -1 4NI9 C P05231 UNP 1 BINDING SITE FOR RESIDUE NA B 101 B NA 101 Software 7 BINDING SITE FOR RESIDUE NA B 102 B NA 102 Software 5 B DG 2 A DG 2 7 1_555 B DA 4 A DA 4 7 1_555 B DG 5 A DG 5 7 1_555 B DG 10 A DG 10 7 1_555 B DG 11 A DG 11 7 1_555 B DG 31 A DG 31 7 1_555 B DG 32 A DG 32 7 1_555 B DG 1 A DG 1 5 1_555 B OMG 6 A OMG 6 5 1_555 B UPE 9 A UPE 9 5 1_555 B DG 10 A DG 10 5 1_555 B DG 32 A DG 32 5 1_555 145 P 32