0.009257 0.005344 0.000000 0.000000 0.010689 0.000000 0.000000 0.000000 0.011090 0.00000 0.00000 0.00000 Li, Y. Waksman, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 108.028 108.028 90.167 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C9 H16 N3 O12 P3 451.158 n 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O6 P 291.198 n 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N C N 80 R C N 81 N O N 82 S C N 83 N O N 84 N C N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C Y 90 N C N 91 N N Y 92 N N Y 93 N C Y 94 N N Y 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N P N 112 N O N 113 N O N 114 N O N 115 N C N 116 R C N 117 N O N 118 S C N 119 N O N 120 N C N 121 R C N 122 N N N 123 N C N 124 N O N 125 N N N 126 N C N 127 N N N 128 N C N 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 N C N 146 N N N 147 N C N 148 N C N 149 N C N 150 N O N 151 N N N 152 R C N 153 N C N 154 N C N 155 S C N 156 N O N 157 N C N 158 N O N 159 S P N 160 N O N 161 N O N 162 N O N 163 R P N 164 N O N 165 N O N 166 N O N 167 N P N 168 N O N 169 N O N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N O N 188 N P N 189 N O N 190 N O N 191 N O N 192 N C N 193 R C N 194 N O N 195 S C N 196 N O N 197 N C N 198 R C Y 199 N N Y 200 N C Y 201 N N Y 202 N C N 203 N C N 204 N O N 205 N N N 206 N C N 207 N N N 208 N N Y 209 N C N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N N N 225 N C N 226 N N N 227 N C N 228 N C N 229 N C N 230 N O N 231 N N N 232 R C N 233 N C N 234 N C N 235 S C N 236 N O N 237 N C N 238 N O N 239 N P N 240 N O N 241 N O N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N O N 258 N P N 259 N O N 260 N O N 261 N O N 262 N C N 263 R C N 264 N O N 265 S C N 266 N O N 267 N C N 268 R C N 269 N N N 270 N C N 271 N O N 272 N N N 273 N C N 274 N O N 275 N C N 276 N C N 277 N C N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N N N 294 S C N 295 N C N 296 N O N 297 N C N 298 N C N 299 N C N 300 N O N 301 N N N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 N C N 318 N C N 319 N C N 320 N O N 321 N O N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N N N 333 N C N 334 N C N 335 N O N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N N N 343 S C N 344 N C N 345 N O N 346 N C Y 347 N C Y 348 N N Y 349 N C Y 350 N C Y 351 N N N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N O N 364 N H N 365 N H N 366 N N N 367 S C N 368 N C N 369 N O N 370 S C N 371 N C N 372 N C N 373 N C N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N N N 389 S C N 390 N C N 391 N O N 392 N C N 393 N C N 394 N C N 395 N C N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N N N 411 S C N 412 N C N 413 N O N 414 N C N 415 N C N 416 N C N 417 N C N 418 N N N 419 N O N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N N N 436 S C N 437 N C N 438 N O N 439 N C N 440 N C N 441 N S N 442 N C N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N MG N 456 N N N 457 S C N 458 N C N 459 N O N 460 N C Y 461 N C Y 462 N C Y 463 N C Y 464 N C Y 465 N C Y 466 N C N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N N N 480 S C N 481 N C N 482 N O N 483 N C N 484 N C N 485 N C N 486 N O N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N N N 497 S C N 498 N C N 499 N O N 500 N C N 501 N O N 502 N O N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N N N 511 S C N 512 N C N 513 N O N 514 R C N 515 N O N 516 N C N 517 N O N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N N N 528 S C N 529 N C N 530 N O N 531 N C Y 532 N C Y 533 N C Y 534 N C Y 535 N N Y 536 N C Y 537 N C Y 538 N C Y 539 N C Y 540 N C N 541 N O N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N N N 555 S C N 556 N C N 557 N O N 558 N C Y 559 N C Y 560 N C Y 561 N C Y 562 N C Y 563 N C Y 564 N C N 565 N O N 566 N O N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N N N 579 S C N 580 N C N 581 N O N 582 N C N 583 N C N 584 N C N 585 N O N 586 N H N 587 N H N 588 N H N 589 N H N 590 N H N 591 N H N 592 N H N 593 N H N 594 N H N 595 N H N 596 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing Y 93 N sing Y 94 N sing Y 95 N doub N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N doub N 102 N sing N 103 N sing Y 104 N sing Y 105 N doub N 106 N sing Y 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N doub N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing Y 210 N sing Y 211 N sing Y 212 N doub N 213 N sing Y 214 N sing N 215 N sing Y 216 N doub N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N doub N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N doub N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing Y 354 N sing Y 355 N doub Y 356 N doub N 357 N sing Y 358 N sing N 359 N sing Y 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N doub N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N doub N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N doub N 458 N sing N 459 N sing N 460 N sing N 461 N sing Y 462 N doub Y 463 N sing Y 464 N sing N 465 N sing Y 466 N doub N 467 N sing Y 468 N doub N 469 N sing Y 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N doub N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N doub N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N doub N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N doub N 527 N sing N 528 N sing N 529 N sing N 530 N sing Y 531 N doub Y 532 N sing Y 533 N sing N 534 N sing Y 535 N doub Y 536 N sing Y 537 N sing N 538 N sing Y 539 N sing Y 540 N doub N 541 N sing Y 542 N doub N 543 N sing Y 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N doub N 555 N sing N 556 N sing N 557 N sing N 558 N sing Y 559 N doub Y 560 N sing Y 561 N sing N 562 N sing Y 563 N doub N 564 N sing Y 565 N doub N 566 N sing Y 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N doub N 579 N sing N 580 N sing N 581 N sing N 582 N sing N 583 N sing N 584 N sing N 585 N sing N 586 N sing N 587 N sing N 588 N sing N 589 N sing UK EMBO J. EMJODG 0897 0261-4189 17 7514 7525 10.1093/emboj/17.24.7514 9857206 Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation. 1998 10.2210/pdb3ktq/pdb pdb_00003ktq 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 3617.371 DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOC)-3') 1 syn polymer COMPLEXED WITH 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE 4337.802 DNA (5'-D(*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') 1 syn polymer 60936.965 PROTEIN (LARGE FRAGMENT OF DNA POLYMERASE I) 2.7.7.7 1 man polymer 24.305 MAGNESIUM ION 2 syn non-polymer 451.158 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE 1 syn non-polymer 18.015 water 149 nat water no yes (DG)(DA)(DC)(DC)(DA)(DC)(DG)(DG)(DC)(DG)(DC)(DOC) GACCACGGCGCC B polydeoxyribonucleotide no no (DA)(DG)(DG)(DG)(DC)(DG)(DC)(DC)(DG)(DT)(DG)(DG)(DT)(DC) AGGGCGCCGTGGTC C polydeoxyribonucleotide no no ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDD PMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLD VAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKI LQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYS QIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAF IERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRL EEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDD PMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLD VAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKI LQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYS QIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAF IERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRL EEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermus X7029 Escherichia sample TAQ 271 Thermus aquaticus 562 Escherichia coli X7029 PWB254 1 2.19 43.88 8.0 pH 8.0 2.940 1 19 B 101 C 216 1.663 B_DG101:DC216_C 1 -8.527 -0.784 0.154 -0.350 8.929 1 20 B 102 C 215 0.059 B_DA102:DT215_C 2 -13.249 -0.002 0.233 -0.265 1.341 1 B 103 C 214 4.955 B_DC103:DG214_C 3 -8.389 1.147 -0.128 0.088 -3.267 1 B 104 C 213 12.874 B_DC104:DG213_C 4 -9.437 -0.681 0.140 0.173 -0.286 1 20 B 105 C 212 3.014 B_DA105:DT212_C 5 -11.467 0.218 0.192 -0.035 5.475 1 19 B 106 C 211 -0.467 B_DC106:DG211_C 6 -9.736 0.036 0.076 -0.127 3.013 1 19 B 107 C 210 1.131 B_DG107:DC210_C 7 -19.018 0.106 0.040 -0.073 -5.535 1 19 B 108 C 209 1.810 B_DG108:DC209_C 8 -11.056 -0.112 -0.007 -0.095 9.165 1 19 B 109 C 208 0.898 B_DC109:DG208_C 9 -3.809 0.311 -0.347 -0.083 7.454 1 19 B 110 C 207 1.244 B_DG110:DC207_C 10 -14.391 -0.214 0.013 -0.331 8.635 1 19 B 111 C 206 1.557 B_DC111:DG206_C 11 -6.352 0.128 -0.097 -0.125 5.342 1 19 B 112 C 205 2.283 B_DOC112:DG205_C 12 -17.616 0.489 0.162 -0.182 3.030 37.866 B B 101 102 10.449 C C 216 215 3.201 6.742 -0.149 -0.739 BB_DG101DA102:DT215DC216_CC 1 -2.545 3.944 37.199 -1.970 -0.084 3.465 34.159 B B 102 103 2.447 C C 215 214 3.483 1.433 0.414 -0.968 BB_DA102DC103:DG214DT215_CC 2 4.693 -8.016 33.815 -1.891 0.089 2.296 25.259 B B 103 104 24.957 C C 214 213 3.024 10.517 -0.313 -1.118 BB_DC103DC104:DG213DG214_CC 3 -4.885 11.593 22.478 -5.201 -0.512 3.361 41.297 B B 104 105 9.472 C C 213 212 3.274 6.653 -1.022 0.731 BB_DC104DA105:DT212DG213_CC 4 -0.582 0.828 40.777 0.306 1.386 3.122 30.833 B B 105 106 5.440 C C 212 211 3.152 2.888 0.258 -0.257 BB_DA105DC106:DG211DT212_CC 5 0.930 -1.751 30.687 -1.025 -0.311 3.321 36.674 B B 106 107 17.017 C C 211 210 3.324 10.562 0.280 0.431 BB_DC106DG107:DC210DG211_CC 6 1.707 -2.750 35.130 -0.818 -0.202 3.356 30.642 B B 107 108 6.449 C C 210 209 3.356 3.397 0.897 -0.436 BB_DG107DG108:DC209DC210_CC 7 2.808 -5.330 30.331 -1.516 -1.126 2.977 32.993 B B 108 109 11.648 C C 209 208 3.035 6.551 0.677 -0.338 BB_DG108DC109:DG208DC209_CC 8 4.781 -8.501 32.008 -1.633 -0.434 3.395 39.722 B B 109 110 14.427 C C 208 207 3.405 9.618 -0.669 0.107 BB_DC109DG110:DC207DG208_CC 9 -9.661 14.491 37.398 -1.045 -0.223 2.745 28.429 B B 110 111 24.450 C C 207 206 3.584 11.658 -0.431 -1.378 BB_DG110DC111:DG206DC207_CC 10 -1.880 3.943 25.907 -5.521 0.440 3.103 35.237 B B 111 112 10.024 C C 206 205 3.390 6.034 -0.196 -1.472 BB_DC111DOC112:DG205DG206_CC 11 -2.909 4.833 34.614 -3.329 -0.108 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_conn_type struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1999-01-13 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-02-21 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y RCSB 1998-07-28 REL MG MAGNESIUM ION DCT 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE HOH water MG 901 4 MG MG 901 A MG 902 4 MG MG 902 A DCT 113 5 DCT DCT 113 A HOH 3008 6 HOH HOH 3008 B HOH 3025 6 HOH HOH 3025 B HOH 3047 6 HOH HOH 3047 B HOH 3049 6 HOH HOH 3049 B HOH 3075 6 HOH HOH 3075 B HOH 3078 6 HOH HOH 3078 B HOH 3104 6 HOH HOH 3104 B HOH 3117 6 HOH HOH 3117 B HOH 3134 6 HOH HOH 3134 B HOH 3135 6 HOH HOH 3135 B HOH 3012 6 HOH HOH 3012 C HOH 3016 6 HOH HOH 3016 C HOH 3037 6 HOH HOH 3037 C HOH 3054 6 HOH HOH 3054 C HOH 3055 6 HOH HOH 3055 C HOH 3070 6 HOH HOH 3070 C HOH 3076 6 HOH HOH 3076 C HOH 3090 6 HOH HOH 3090 C HOH 3091 6 HOH HOH 3091 C HOH 3133 6 HOH HOH 3133 C HOH 3144 6 HOH HOH 3144 C HOH 3148 6 HOH HOH 3148 C HOH 3001 6 HOH HOH 3001 A HOH 3002 6 HOH HOH 3002 A HOH 3003 6 HOH HOH 3003 A HOH 3004 6 HOH HOH 3004 A HOH 3005 6 HOH HOH 3005 A HOH 3006 6 HOH HOH 3006 A HOH 3007 6 HOH HOH 3007 A HOH 3009 6 HOH HOH 3009 A HOH 3010 6 HOH HOH 3010 A HOH 3011 6 HOH HOH 3011 A HOH 3013 6 HOH HOH 3013 A HOH 3014 6 HOH HOH 3014 A HOH 3015 6 HOH HOH 3015 A HOH 3017 6 HOH HOH 3017 A HOH 3018 6 HOH HOH 3018 A HOH 3019 6 HOH HOH 3019 A HOH 3020 6 HOH HOH 3020 A HOH 3021 6 HOH HOH 3021 A HOH 3022 6 HOH HOH 3022 A HOH 3023 6 HOH HOH 3023 A HOH 3024 6 HOH HOH 3024 A HOH 3026 6 HOH HOH 3026 A HOH 3027 6 HOH HOH 3027 A HOH 3028 6 HOH HOH 3028 A HOH 3029 6 HOH HOH 3029 A HOH 3030 6 HOH HOH 3030 A HOH 3031 6 HOH HOH 3031 A HOH 3032 6 HOH HOH 3032 A HOH 3033 6 HOH HOH 3033 A HOH 3034 6 HOH HOH 3034 A HOH 3035 6 HOH HOH 3035 A HOH 3036 6 HOH HOH 3036 A HOH 3038 6 HOH HOH 3038 A HOH 3039 6 HOH HOH 3039 A HOH 3040 6 HOH HOH 3040 A HOH 3041 6 HOH HOH 3041 A HOH 3042 6 HOH HOH 3042 A HOH 3043 6 HOH HOH 3043 A HOH 3044 6 HOH HOH 3044 A HOH 3045 6 HOH HOH 3045 A HOH 3046 6 HOH HOH 3046 A HOH 3048 6 HOH HOH 3048 A HOH 3050 6 HOH HOH 3050 A HOH 3051 6 HOH HOH 3051 A HOH 3052 6 HOH HOH 3052 A HOH 3053 6 HOH HOH 3053 A HOH 3056 6 HOH HOH 3056 A HOH 3057 6 HOH HOH 3057 A HOH 3058 6 HOH HOH 3058 A HOH 3059 6 HOH HOH 3059 A HOH 3060 6 HOH HOH 3060 A HOH 3061 6 HOH HOH 3061 A HOH 3062 6 HOH HOH 3062 A HOH 3063 6 HOH HOH 3063 A HOH 3064 6 HOH HOH 3064 A HOH 3065 6 HOH HOH 3065 A HOH 3066 6 HOH HOH 3066 A HOH 3067 6 HOH HOH 3067 A HOH 3068 6 HOH HOH 3068 A HOH 3069 6 HOH HOH 3069 A HOH 3071 6 HOH HOH 3071 A HOH 3072 6 HOH HOH 3072 A HOH 3073 6 HOH HOH 3073 A HOH 3074 6 HOH HOH 3074 A HOH 3077 6 HOH HOH 3077 A HOH 3079 6 HOH HOH 3079 A HOH 3080 6 HOH HOH 3080 A HOH 3081 6 HOH HOH 3081 A HOH 3082 6 HOH HOH 3082 A HOH 3083 6 HOH HOH 3083 A HOH 3084 6 HOH HOH 3084 A HOH 3085 6 HOH HOH 3085 A HOH 3086 6 HOH HOH 3086 A HOH 3087 6 HOH HOH 3087 A HOH 3088 6 HOH HOH 3088 A HOH 3089 6 HOH HOH 3089 A HOH 3092 6 HOH HOH 3092 A HOH 3093 6 HOH HOH 3093 A HOH 3094 6 HOH HOH 3094 A HOH 3095 6 HOH HOH 3095 A HOH 3096 6 HOH HOH 3096 A HOH 3097 6 HOH HOH 3097 A HOH 3098 6 HOH HOH 3098 A HOH 3099 6 HOH HOH 3099 A HOH 3100 6 HOH HOH 3100 A HOH 3101 6 HOH HOH 3101 A HOH 3102 6 HOH HOH 3102 A HOH 3103 6 HOH HOH 3103 A HOH 3105 6 HOH HOH 3105 A HOH 3106 6 HOH HOH 3106 A HOH 3107 6 HOH HOH 3107 A HOH 3108 6 HOH HOH 3108 A HOH 3109 6 HOH HOH 3109 A HOH 3110 6 HOH HOH 3110 A HOH 3111 6 HOH HOH 3111 A HOH 3112 6 HOH HOH 3112 A HOH 3113 6 HOH HOH 3113 A HOH 3114 6 HOH HOH 3114 A HOH 3115 6 HOH HOH 3115 A HOH 3116 6 HOH HOH 3116 A HOH 3118 6 HOH HOH 3118 A HOH 3119 6 HOH HOH 3119 A HOH 3120 6 HOH HOH 3120 A HOH 3121 6 HOH HOH 3121 A HOH 3122 6 HOH HOH 3122 A HOH 3123 6 HOH HOH 3123 A HOH 3124 6 HOH HOH 3124 A HOH 3125 6 HOH HOH 3125 A HOH 3126 6 HOH HOH 3126 A HOH 3127 6 HOH HOH 3127 A HOH 3128 6 HOH HOH 3128 A HOH 3129 6 HOH HOH 3129 A HOH 3130 6 HOH HOH 3130 A HOH 3131 6 HOH HOH 3131 A HOH 3132 6 HOH HOH 3132 A HOH 3136 6 HOH HOH 3136 A HOH 3137 6 HOH HOH 3137 A HOH 3138 6 HOH HOH 3138 A HOH 3139 6 HOH HOH 3139 A HOH 3140 6 HOH HOH 3140 A HOH 3141 6 HOH HOH 3141 A HOH 3142 6 HOH HOH 3142 A HOH 3143 6 HOH HOH 3143 A HOH 3145 6 HOH HOH 3145 A HOH 3146 6 HOH HOH 3146 A HOH 3147 6 HOH HOH 3147 A HOH 3149 6 HOH HOH 3149 A G 101 n 1 DG 101 B A 102 n 2 DA 102 B C 103 n 3 DC 103 B C 104 n 4 DC 104 B A 105 n 5 DA 105 B C 106 n 6 DC 106 B G 107 n 7 DG 107 B G 108 n 8 DG 108 B C 109 n 9 DC 109 B G 110 n 10 DG 110 B C 111 n 11 DC 111 B DOC 112 n 12 DOC 112 B A 203 n 1 DA 203 C G 204 n 2 DG 204 C G 205 n 3 DG 205 C G 206 n 4 DG 206 C C 207 n 5 DC 207 C G 208 n 6 DG 208 C C 209 n 7 DC 209 C C 210 n 8 DC 210 C G 211 n 9 DG 211 C T 212 n 10 DT 212 C G 213 n 11 DG 213 C G 214 n 12 DG 214 C T 215 n 13 DT 215 C C 216 n 14 DC 216 C ALA 293 n 1 ALA 293 A LEU 294 n 2 LEU 294 A ALA 295 n 3 GLU 295 A GLU 296 n 4 GLU 296 A ALA 297 n 5 ALA 297 A PRO 298 n 6 PRO 298 A TRP 299 n 7 TRP 299 A PRO 300 n 8 PRO 300 A PRO 301 n 9 PRO 301 A PRO 302 n 10 PRO 302 A ALA 303 n 11 GLU 303 A GLY 304 n 12 GLY 304 A ALA 305 n 13 ALA 305 A PHE 306 n 14 PHE 306 A VAL 307 n 15 VAL 307 A GLY 308 n 16 GLY 308 A PHE 309 n 17 PHE 309 A VAL 310 n 18 VAL 310 A LEU 311 n 19 LEU 311 A SER 312 n 20 SER 312 A ARG 313 n 21 ARG 313 A LYS 314 n 22 LYS 314 A GLU 315 n 23 GLU 315 A PRO 316 n 24 PRO 316 A MET 317 n 25 MET 317 A TRP 318 n 26 TRP 318 A ALA 319 n 27 ALA 319 A ASP 320 n 28 ASP 320 A LEU 321 n 29 LEU 321 A LEU 322 n 30 LEU 322 A ALA 323 n 31 ALA 323 A LEU 324 n 32 LEU 324 A ALA 325 n 33 ALA 325 A ALA 326 n 34 ALA 326 A ALA 327 n 35 ALA 327 A ARG 328 n 36 ARG 328 A GLY 329 n 37 GLY 329 A GLY 330 n 38 GLY 330 A ALA 331 n 39 ARG 331 A VAL 332 n 40 VAL 332 A HIS 333 n 41 HIS 333 A ARG 334 n 42 ARG 334 A ALA 335 n 43 ALA 335 A PRO 336 n 44 PRO 336 A GLU 337 n 45 GLU 337 A PRO 338 n 46 PRO 338 A TYR 339 n 47 TYR 339 A LYS 340 n 48 LYS 340 A ALA 341 n 49 ALA 341 A LEU 342 n 50 LEU 342 A ARG 343 n 51 ARG 343 A ASP 344 n 52 ASP 344 A LEU 345 n 53 LEU 345 A ALA 346 n 54 LYS 346 A GLU 347 n 55 GLU 347 A ALA 348 n 56 ALA 348 A ARG 349 n 57 ARG 349 A GLY 350 n 58 GLY 350 A LEU 351 n 59 LEU 351 A LEU 352 n 60 LEU 352 A ALA 353 n 61 ALA 353 A LYS 354 n 62 LYS 354 A ASP 355 n 63 ASP 355 A LEU 356 n 64 LEU 356 A SER 357 n 65 SER 357 A VAL 358 n 66 VAL 358 A LEU 359 n 67 LEU 359 A ALA 360 n 68 ALA 360 A LEU 361 n 69 LEU 361 A ARG 362 n 70 ARG 362 A GLU 363 n 71 GLU 363 A GLY 364 n 72 GLY 364 A LEU 365 n 73 LEU 365 A GLY 366 n 74 GLY 366 A LEU 367 n 75 LEU 367 A PRO 368 n 76 PRO 368 A PRO 369 n 77 PRO 369 A GLY 370 n 78 GLY 370 A ASP 371 n 79 ASP 371 A ASP 372 n 80 ASP 372 A PRO 373 n 81 PRO 373 A MET 374 n 82 MET 374 A LEU 375 n 83 LEU 375 A LEU 376 n 84 LEU 376 A ALA 377 n 85 ALA 377 A TYR 378 n 86 TYR 378 A LEU 379 n 87 LEU 379 A LEU 380 n 88 LEU 380 A ASP 381 n 89 ASP 381 A PRO 382 n 90 PRO 382 A SER 383 n 91 SER 383 A ASN 384 n 92 ASN 384 A THR 385 n 93 THR 385 A THR 386 n 94 THR 386 A PRO 387 n 95 PRO 387 A GLU 388 n 96 GLU 388 A GLY 389 n 97 GLY 389 A VAL 390 n 98 VAL 390 A ALA 391 n 99 ALA 391 A ALA 392 n 100 ARG 392 A ARG 393 n 101 ARG 393 A TYR 394 n 102 TYR 394 A GLY 395 n 103 GLY 395 A GLY 396 n 104 GLY 396 A GLU 397 n 105 GLU 397 A TRP 398 n 106 TRP 398 A THR 399 n 107 THR 399 A GLU 400 n 108 GLU 400 A GLU 401 n 109 GLU 401 A ALA 402 n 110 ALA 402 A GLY 403 n 111 GLY 403 A GLU 404 n 112 GLU 404 A ARG 405 n 113 ARG 405 A ALA 406 n 114 ALA 406 A ALA 407 n 115 ALA 407 A LEU 408 n 116 LEU 408 A SER 409 n 117 SER 409 A GLU 410 n 118 GLU 410 A ARG 411 n 119 ARG 411 A LEU 412 n 120 LEU 412 A PHE 413 n 121 PHE 413 A ALA 414 n 122 ALA 414 A ASN 415 n 123 ASN 415 A LEU 416 n 124 LEU 416 A TRP 417 n 125 TRP 417 A GLY 418 n 126 GLY 418 A ARG 419 n 127 ARG 419 A LEU 420 n 128 LEU 420 A ALA 421 n 129 GLU 421 A GLY 422 n 130 GLY 422 A GLU 423 n 131 GLU 423 A ALA 424 n 132 GLU 424 A ARG 425 n 133 ARG 425 A LEU 426 n 134 LEU 426 A LEU 427 n 135 LEU 427 A TRP 428 n 136 TRP 428 A LEU 429 n 137 LEU 429 A TYR 430 n 138 TYR 430 A ARG 431 n 139 ARG 431 A GLU 432 n 140 GLU 432 A VAL 433 n 141 VAL 433 A GLU 434 n 142 GLU 434 A ARG 435 n 143 ARG 435 A PRO 436 n 144 PRO 436 A LEU 437 n 145 LEU 437 A SER 438 n 146 SER 438 A ALA 439 n 147 ALA 439 A VAL 440 n 148 VAL 440 A LEU 441 n 149 LEU 441 A ALA 442 n 150 ALA 442 A HIS 443 n 151 HIS 443 A MET 444 n 152 MET 444 A GLU 445 n 153 GLU 445 A ALA 446 n 154 ALA 446 A THR 447 n 155 THR 447 A GLY 448 n 156 GLY 448 A VAL 449 n 157 VAL 449 A ARG 450 n 158 ARG 450 A LEU 451 n 159 LEU 451 A ASP 452 n 160 ASP 452 A VAL 453 n 161 VAL 453 A ALA 454 n 162 ALA 454 A TYR 455 n 163 TYR 455 A LEU 456 n 164 LEU 456 A ARG 457 n 165 ARG 457 A ALA 458 n 166 ALA 458 A LEU 459 n 167 LEU 459 A SER 460 n 168 SER 460 A LEU 461 n 169 LEU 461 A GLU 462 n 170 GLU 462 A VAL 463 n 171 VAL 463 A ALA 464 n 172 ALA 464 A GLU 465 n 173 GLU 465 A GLU 466 n 174 GLU 466 A ILE 467 n 175 ILE 467 A ALA 468 n 176 ALA 468 A ARG 469 n 177 ARG 469 A LEU 470 n 178 LEU 470 A GLU 471 n 179 GLU 471 A ALA 472 n 180 ALA 472 A GLU 473 n 181 GLU 473 A VAL 474 n 182 VAL 474 A PHE 475 n 183 PHE 475 A ARG 476 n 184 ARG 476 A LEU 477 n 185 LEU 477 A ALA 478 n 186 ALA 478 A GLY 479 n 187 GLY 479 A HIS 480 n 188 HIS 480 A PRO 481 n 189 PRO 481 A PHE 482 n 190 PHE 482 A ASN 483 n 191 ASN 483 A LEU 484 n 192 LEU 484 A ASN 485 n 193 ASN 485 A SER 486 n 194 SER 486 A ARG 487 n 195 ARG 487 A ASP 488 n 196 ASP 488 A GLN 489 n 197 GLN 489 A LEU 490 n 198 LEU 490 A GLU 491 n 199 GLU 491 A ARG 492 n 200 ARG 492 A VAL 493 n 201 VAL 493 A LEU 494 n 202 LEU 494 A PHE 495 n 203 PHE 495 A ASP 496 n 204 ASP 496 A GLU 497 n 205 GLU 497 A LEU 498 n 206 LEU 498 A GLY 499 n 207 GLY 499 A LEU 500 n 208 LEU 500 A PRO 501 n 209 PRO 501 A ALA 502 n 210 ALA 502 A ILE 503 n 211 ILE 503 A GLY 504 n 212 GLY 504 A LYS 505 n 213 LYS 505 A THR 506 n 214 THR 506 A GLU 507 n 215 GLU 507 A LYS 508 n 216 LYS 508 A THR 509 n 217 THR 509 A GLY 510 n 218 GLY 510 A LYS 511 n 219 LYS 511 A ARG 512 n 220 ARG 512 A SER 513 n 221 SER 513 A THR 514 n 222 THR 514 A SER 515 n 223 SER 515 A ALA 516 n 224 ALA 516 A ALA 517 n 225 ALA 517 A VAL 518 n 226 VAL 518 A LEU 519 n 227 LEU 519 A GLU 520 n 228 GLU 520 A ALA 521 n 229 ALA 521 A LEU 522 n 230 LEU 522 A ALA 523 n 231 ARG 523 A GLU 524 n 232 GLU 524 A ALA 525 n 233 ALA 525 A HIS 526 n 234 HIS 526 A PRO 527 n 235 PRO 527 A ILE 528 n 236 ILE 528 A VAL 529 n 237 VAL 529 A ALA 530 n 238 GLU 530 A LYS 531 n 239 LYS 531 A ILE 532 n 240 ILE 532 A LEU 533 n 241 LEU 533 A GLN 534 n 242 GLN 534 A TYR 535 n 243 TYR 535 A ARG 536 n 244 ARG 536 A GLU 537 n 245 GLU 537 A LEU 538 n 246 LEU 538 A THR 539 n 247 THR 539 A LYS 540 n 248 LYS 540 A LEU 541 n 249 LEU 541 A LYS 542 n 250 LYS 542 A SER 543 n 251 SER 543 A THR 544 n 252 THR 544 A TYR 545 n 253 TYR 545 A ILE 546 n 254 ILE 546 A ASP 547 n 255 ASP 547 A PRO 548 n 256 PRO 548 A LEU 549 n 257 LEU 549 A PRO 550 n 258 PRO 550 A ASP 551 n 259 ASP 551 A LEU 552 n 260 LEU 552 A ILE 553 n 261 ILE 553 A HIS 554 n 262 HIS 554 A PRO 555 n 263 PRO 555 A ARG 556 n 264 ARG 556 A THR 557 n 265 THR 557 A GLY 558 n 266 GLY 558 A ARG 559 n 267 ARG 559 A LEU 560 n 268 LEU 560 A HIS 561 n 269 HIS 561 A THR 562 n 270 THR 562 A ARG 563 n 271 ARG 563 A PHE 564 n 272 PHE 564 A ASN 565 n 273 ASN 565 A GLN 566 n 274 GLN 566 A THR 567 n 275 THR 567 A ALA 568 n 276 ALA 568 A THR 569 n 277 THR 569 A ALA 570 n 278 ALA 570 A THR 571 n 279 THR 571 A GLY 572 n 280 GLY 572 A ARG 573 n 281 ARG 573 A LEU 574 n 282 LEU 574 A SER 575 n 283 SER 575 A SER 576 n 284 SER 576 A SER 577 n 285 SER 577 A ASP 578 n 286 ASP 578 A PRO 579 n 287 PRO 579 A ASN 580 n 288 ASN 580 A LEU 581 n 289 LEU 581 A GLN 582 n 290 GLN 582 A ASN 583 n 291 ASN 583 A ILE 584 n 292 ILE 584 A PRO 585 n 293 PRO 585 A VAL 586 n 294 VAL 586 A ARG 587 n 295 ARG 587 A THR 588 n 296 THR 588 A PRO 589 n 297 PRO 589 A LEU 590 n 298 LEU 590 A GLY 591 n 299 GLY 591 A GLN 592 n 300 GLN 592 A ARG 593 n 301 ARG 593 A ILE 594 n 302 ILE 594 A ARG 595 n 303 ARG 595 A ARG 596 n 304 ARG 596 A ALA 597 n 305 ALA 597 A PHE 598 n 306 PHE 598 A ILE 599 n 307 ILE 599 A ALA 600 n 308 ALA 600 A GLU 601 n 309 GLU 601 A GLU 602 n 310 GLU 602 A GLY 603 n 311 GLY 603 A TRP 604 n 312 TRP 604 A LEU 605 n 313 LEU 605 A LEU 606 n 314 LEU 606 A VAL 607 n 315 VAL 607 A ALA 608 n 316 ALA 608 A LEU 609 n 317 LEU 609 A ASP 610 n 318 ASP 610 A TYR 611 n 319 TYR 611 A SER 612 n 320 SER 612 A GLN 613 n 321 GLN 613 A ILE 614 n 322 ILE 614 A GLU 615 n 323 GLU 615 A LEU 616 n 324 LEU 616 A ARG 617 n 325 ARG 617 A VAL 618 n 326 VAL 618 A LEU 619 n 327 LEU 619 A ALA 620 n 328 ALA 620 A HIS 621 n 329 HIS 621 A LEU 622 n 330 LEU 622 A SER 623 n 331 SER 623 A GLY 624 n 332 GLY 624 A ASP 625 n 333 ASP 625 A GLU 626 n 334 GLU 626 A ALA 627 n 335 ASN 627 A LEU 628 n 336 LEU 628 A ILE 629 n 337 ILE 629 A ALA 630 n 338 ARG 630 A VAL 631 n 339 VAL 631 A PHE 632 n 340 PHE 632 A GLN 633 n 341 GLN 633 A ALA 634 n 342 GLU 634 A GLY 635 n 343 GLY 635 A ARG 636 n 344 ARG 636 A ASP 637 n 345 ASP 637 A ILE 638 n 346 ILE 638 A HIS 639 n 347 HIS 639 A THR 640 n 348 THR 640 A GLU 641 n 349 GLU 641 A THR 642 n 350 THR 642 A ALA 643 n 351 ALA 643 A SER 644 n 352 SER 644 A TRP 645 n 353 TRP 645 A MET 646 n 354 MET 646 A PHE 647 n 355 PHE 647 A GLY 648 n 356 GLY 648 A VAL 649 n 357 VAL 649 A PRO 650 n 358 PRO 650 A ARG 651 n 359 ARG 651 A GLU 652 n 360 GLU 652 A ALA 653 n 361 ALA 653 A VAL 654 n 362 VAL 654 A ASP 655 n 363 ASP 655 A PRO 656 n 364 PRO 656 A LEU 657 n 365 LEU 657 A MET 658 n 366 MET 658 A ARG 659 n 367 ARG 659 A ARG 660 n 368 ARG 660 A ALA 661 n 369 ALA 661 A ALA 662 n 370 ALA 662 A LYS 663 n 371 LYS 663 A THR 664 n 372 THR 664 A ILE 665 n 373 ILE 665 A ASN 666 n 374 ASN 666 A PHE 667 n 375 PHE 667 A GLY 668 n 376 GLY 668 A VAL 669 n 377 VAL 669 A LEU 670 n 378 LEU 670 A TYR 671 n 379 TYR 671 A GLY 672 n 380 GLY 672 A MET 673 n 381 MET 673 A SER 674 n 382 SER 674 A ALA 675 n 383 ALA 675 A HIS 676 n 384 HIS 676 A ARG 677 n 385 ARG 677 A LEU 678 n 386 LEU 678 A SER 679 n 387 SER 679 A GLN 680 n 388 GLN 680 A GLU 681 n 389 GLU 681 A LEU 682 n 390 LEU 682 A ALA 683 n 391 ALA 683 A ILE 684 n 392 ILE 684 A PRO 685 n 393 PRO 685 A TYR 686 n 394 TYR 686 A ALA 687 n 395 GLU 687 A ALA 688 n 396 GLU 688 A ALA 689 n 397 ALA 689 A GLN 690 n 398 GLN 690 A ALA 691 n 399 ALA 691 A PHE 692 n 400 PHE 692 A ILE 693 n 401 ILE 693 A ALA 694 n 402 GLU 694 A ALA 695 n 403 ARG 695 A TYR 696 n 404 TYR 696 A PHE 697 n 405 PHE 697 A ALA 698 n 406 GLN 698 A ALA 699 n 407 SER 699 A PHE 700 n 408 PHE 700 A PRO 701 n 409 PRO 701 A LYS 702 n 410 LYS 702 A VAL 703 n 411 VAL 703 A ALA 704 n 412 ARG 704 A ALA 705 n 413 ALA 705 A TRP 706 n 414 TRP 706 A ILE 707 n 415 ILE 707 A GLU 708 n 416 GLU 708 A ALA 709 n 417 LYS 709 A THR 710 n 418 THR 710 A LEU 711 n 419 LEU 711 A GLU 712 n 420 GLU 712 A ALA 713 n 421 GLU 713 A GLY 714 n 422 GLY 714 A ARG 715 n 423 ARG 715 A ALA 716 n 424 ARG 716 A ARG 717 n 425 ARG 717 A GLY 718 n 426 GLY 718 A TYR 719 n 427 TYR 719 A VAL 720 n 428 VAL 720 A GLU 721 n 429 GLU 721 A THR 722 n 430 THR 722 A LEU 723 n 431 LEU 723 A PHE 724 n 432 PHE 724 A GLY 725 n 433 GLY 725 A ARG 726 n 434 ARG 726 A ARG 727 n 435 ARG 727 A ARG 728 n 436 ARG 728 A TYR 729 n 437 TYR 729 A VAL 730 n 438 VAL 730 A PRO 731 n 439 PRO 731 A ASP 732 n 440 ASP 732 A LEU 733 n 441 LEU 733 A GLU 734 n 442 GLU 734 A ALA 735 n 443 ALA 735 A ARG 736 n 444 ARG 736 A VAL 737 n 445 VAL 737 A LYS 738 n 446 LYS 738 A SER 739 n 447 SER 739 A VAL 740 n 448 VAL 740 A ARG 741 n 449 ARG 741 A GLU 742 n 450 GLU 742 A ALA 743 n 451 ALA 743 A ALA 744 n 452 ALA 744 A GLU 745 n 453 GLU 745 A ARG 746 n 454 ARG 746 A MET 747 n 455 MET 747 A ALA 748 n 456 ALA 748 A PHE 749 n 457 PHE 749 A ASN 750 n 458 ASN 750 A MET 751 n 459 MET 751 A PRO 752 n 460 PRO 752 A VAL 753 n 461 VAL 753 A GLN 754 n 462 GLN 754 A GLY 755 n 463 GLY 755 A THR 756 n 464 THR 756 A ALA 757 n 465 ALA 757 A ALA 758 n 466 ALA 758 A ASP 759 n 467 ASP 759 A LEU 760 n 468 LEU 760 A MET 761 n 469 MET 761 A LYS 762 n 470 LYS 762 A LEU 763 n 471 LEU 763 A ALA 764 n 472 ALA 764 A MET 765 n 473 MET 765 A VAL 766 n 474 VAL 766 A LYS 767 n 475 LYS 767 A LEU 768 n 476 LEU 768 A PHE 769 n 477 PHE 769 A PRO 770 n 478 PRO 770 A ARG 771 n 479 ARG 771 A LEU 772 n 480 LEU 772 A GLU 773 n 481 GLU 773 A ALA 774 n 482 GLU 774 A MET 775 n 483 MET 775 A GLY 776 n 484 GLY 776 A ALA 777 n 485 ALA 777 A ARG 778 n 486 ARG 778 A MET 779 n 487 MET 779 A LEU 780 n 488 LEU 780 A LEU 781 n 489 LEU 781 A GLN 782 n 490 GLN 782 A VAL 783 n 491 VAL 783 A HIS 784 n 492 HIS 784 A ASP 785 n 493 ASP 785 A GLU 786 n 494 GLU 786 A LEU 787 n 495 LEU 787 A VAL 788 n 496 VAL 788 A LEU 789 n 497 LEU 789 A GLU 790 n 498 GLU 790 A ALA 791 n 499 ALA 791 A PRO 792 n 500 PRO 792 A ALA 793 n 501 LYS 793 A ALA 794 n 502 GLU 794 A ARG 795 n 503 ARG 795 A ALA 796 n 504 ALA 796 A GLU 797 n 505 GLU 797 A ALA 798 n 506 ALA 798 A VAL 799 n 507 VAL 799 A ALA 800 n 508 ALA 800 A ARG 801 n 509 ARG 801 A LEU 802 n 510 LEU 802 A ALA 803 n 511 ALA 803 A LYS 804 n 512 LYS 804 A GLU 805 n 513 GLU 805 A VAL 806 n 514 VAL 806 A MET 807 n 515 MET 807 A GLU 808 n 516 GLU 808 A GLY 809 n 517 GLY 809 A VAL 810 n 518 VAL 810 A TYR 811 n 519 TYR 811 A PRO 812 n 520 PRO 812 A LEU 813 n 521 LEU 813 A ALA 814 n 522 ALA 814 A VAL 815 n 523 VAL 815 A PRO 816 n 524 PRO 816 A LEU 817 n 525 LEU 817 A GLU 818 n 526 GLU 818 A VAL 819 n 527 VAL 819 A ALA 820 n 528 GLU 820 A VAL 821 n 529 VAL 821 A GLY 822 n 530 GLY 822 A ILE 823 n 531 ILE 823 A GLY 824 n 532 GLY 824 A GLU 825 n 533 GLU 825 A ASP 826 n 534 ASP 826 A TRP 827 n 535 TRP 827 A LEU 828 n 536 LEU 828 A SER 829 n 537 SER 829 A ALA 830 n 538 ALA 830 A LYS 831 n 539 LYS 831 A n 540 832 A author_defined_assembly 3 trimeric A DCT 113 F O2A DCT 1_555 A MG 901 D MG MG 1_555 A DCT 113 F O2B DCT 1_555 95.3 A DCT 113 F O2A DCT 1_555 A MG 901 D MG MG 1_555 A DCT 113 F O3B DCT 1_555 89.6 A DCT 113 F O2B DCT 1_555 A MG 901 D MG MG 1_555 A DCT 113 F O3B DCT 1_555 52.5 A DCT 113 F O2A DCT 1_555 A MG 901 D MG MG 1_555 A DCT 113 F O1G DCT 1_555 98.4 A DCT 113 F O2B DCT 1_555 A MG 901 D MG MG 1_555 A DCT 113 F O1G DCT 1_555 104.3 A DCT 113 F O3B DCT 1_555 A MG 901 D MG MG 1_555 A DCT 113 F O1G DCT 1_555 53.6 A DCT 113 F O2A DCT 1_555 A MG 901 D MG MG 1_555 A ASP 610 C OD1 ASP 318 1_555 91.0 A DCT 113 F O2B DCT 1_555 A MG 901 D MG MG 1_555 A ASP 610 C OD1 ASP 318 1_555 170.6 A DCT 113 F O3B DCT 1_555 A MG 901 D MG MG 1_555 A ASP 610 C OD1 ASP 318 1_555 134.7 A DCT 113 F O1G DCT 1_555 A MG 901 D MG MG 1_555 A ASP 610 C OD1 ASP 318 1_555 81.6 A DCT 113 F O2A DCT 1_555 A MG 901 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 170.0 A DCT 113 F O2B DCT 1_555 A MG 901 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 93.5 A DCT 113 F O3B DCT 1_555 A MG 901 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 99.6 A DCT 113 F O1G DCT 1_555 A MG 901 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 84.0 A ASP 610 C OD1 ASP 318 1_555 A MG 901 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 79.6 A DCT 113 F O2A DCT 1_555 A MG 901 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 88.1 A DCT 113 F O2B DCT 1_555 A MG 901 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 82.1 A DCT 113 F O3B DCT 1_555 A MG 901 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 134.1 A DCT 113 F O1G DCT 1_555 A MG 901 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 170.3 A ASP 610 C OD1 ASP 318 1_555 A MG 901 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 91.1 A TYR 611 C O TYR 319 1_555 A MG 901 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 88.4 A DCT 113 F O2A DCT 1_555 A MG 902 E MG MG 1_555 A ASP 610 C OD2 ASP 318 1_555 98.1 A DCT 113 F O2A DCT 1_555 A MG 902 E MG MG 1_555 A ASP 785 C OD1 ASP 493 1_555 72.9 A ASP 610 C OD2 ASP 318 1_555 A MG 902 E MG MG 1_555 A ASP 785 C OD1 ASP 493 1_555 105.0 A DCT 113 F O2A DCT 1_555 A MG 902 E MG MG 1_555 A HOH 3003 I O HOH 1_555 78.1 A ASP 610 C OD2 ASP 318 1_555 A MG 902 E MG MG 1_555 A HOH 3003 I O HOH 1_555 87.7 A ASP 785 C OD1 ASP 493 1_555 A MG 902 E MG MG 1_555 A HOH 3003 I O HOH 1_555 149.6 A DCT 113 F O2A DCT 1_555 A MG 902 E MG MG 1_555 A HOH 3125 I O HOH 1_555 152.5 A ASP 610 C OD2 ASP 318 1_555 A MG 902 E MG MG 1_555 A HOH 3125 I O HOH 1_555 109.3 A ASP 785 C OD1 ASP 493 1_555 A MG 902 E MG MG 1_555 A HOH 3125 I O HOH 1_555 101.1 A HOH 3003 I O HOH 1_555 A MG 902 E MG MG 1_555 A HOH 3125 I O HOH 1_555 100.4 B DOC 112 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE A DOC 12 DC 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLU 295 C O GLU 3 A N VAL 332 C N VAL 40 A O ARG 331 C O ARG 39 A N ARG 328 C N ARG 36 A O LEU 322 C O LEU 30 A N VAL 310 C N VAL 18 A O ARG 563 C O ARG 271 A N SER 577 C N SER 285 A O GLU 820 C O GLU 528 A N ASP 610 C N ASP 318 A O LEU 605 C O LEU 313 A N ALA 791 C N ALA 499 A O VAL 788 C O VAL 496 A N LEU 781 C N LEU 489 A O VAL 720 C O VAL 428 A N ARG 728 C N ARG 436 1 A CG GLU 295 C CG GLU 3 1 Y 1 A CD GLU 295 C CD GLU 3 1 Y 1 A OE1 GLU 295 C OE1 GLU 3 1 Y 1 A OE2 GLU 295 C OE2 GLU 3 1 Y 1 A CG GLU 303 C CG GLU 11 1 Y 1 A CD GLU 303 C CD GLU 11 1 Y 1 A OE1 GLU 303 C OE1 GLU 11 1 Y 1 A OE2 GLU 303 C OE2 GLU 11 1 Y 1 A CG ARG 331 C CG ARG 39 1 Y 1 A CD ARG 331 C CD ARG 39 1 Y 1 A NE ARG 331 C NE ARG 39 1 Y 1 A CZ ARG 331 C CZ ARG 39 1 Y 1 A NH1 ARG 331 C NH1 ARG 39 1 Y 1 A NH2 ARG 331 C NH2 ARG 39 1 Y 1 A CG LYS 346 C CG LYS 54 1 Y 1 A CD LYS 346 C CD LYS 54 1 Y 1 A CE LYS 346 C CE LYS 54 1 Y 1 A NZ LYS 346 C NZ LYS 54 1 Y 1 A CG ARG 392 C CG ARG 100 1 Y 1 A CD ARG 392 C CD ARG 100 1 Y 1 A NE ARG 392 C NE ARG 100 1 Y 1 A CZ ARG 392 C CZ ARG 100 1 Y 1 A NH1 ARG 392 C NH1 ARG 100 1 Y 1 A NH2 ARG 392 C NH2 ARG 100 1 Y 1 A CG GLU 421 C CG GLU 129 1 Y 1 A CD GLU 421 C CD GLU 129 1 Y 1 A OE1 GLU 421 C OE1 GLU 129 1 Y 1 A OE2 GLU 421 C OE2 GLU 129 1 Y 1 A CG GLU 424 C CG GLU 132 1 Y 1 A CD GLU 424 C CD GLU 132 1 Y 1 A OE1 GLU 424 C OE1 GLU 132 1 Y 1 A OE2 GLU 424 C OE2 GLU 132 1 Y 1 A CG ARG 523 C CG ARG 231 1 Y 1 A CD ARG 523 C CD ARG 231 1 Y 1 A NE ARG 523 C NE ARG 231 1 Y 1 A CZ ARG 523 C CZ ARG 231 1 Y 1 A NH1 ARG 523 C NH1 ARG 231 1 Y 1 A NH2 ARG 523 C NH2 ARG 231 1 Y 1 A CG GLU 530 C CG GLU 238 1 Y 1 A CD GLU 530 C CD GLU 238 1 Y 1 A OE1 GLU 530 C OE1 GLU 238 1 Y 1 A OE2 GLU 530 C OE2 GLU 238 1 Y 1 A CG ASN 627 C CG ASN 335 1 Y 1 A OD1 ASN 627 C OD1 ASN 335 1 Y 1 A ND2 ASN 627 C ND2 ASN 335 1 Y 1 A CG ARG 630 C CG ARG 338 1 Y 1 A CD ARG 630 C CD ARG 338 1 Y 1 A NE ARG 630 C NE ARG 338 1 Y 1 A CZ ARG 630 C CZ ARG 338 1 Y 1 A NH1 ARG 630 C NH1 ARG 338 1 Y 1 A NH2 ARG 630 C NH2 ARG 338 1 Y 1 A CG GLU 634 C CG GLU 342 1 Y 1 A CD GLU 634 C CD GLU 342 1 Y 1 A OE1 GLU 634 C OE1 GLU 342 1 Y 1 A OE2 GLU 634 C OE2 GLU 342 1 Y 1 A CG GLU 687 C CG GLU 395 1 Y 1 A CD GLU 687 C CD GLU 395 1 Y 1 A OE1 GLU 687 C OE1 GLU 395 1 Y 1 A OE2 GLU 687 C OE2 GLU 395 1 Y 1 A CG GLU 688 C CG GLU 396 1 Y 1 A CD GLU 688 C CD GLU 396 1 Y 1 A OE1 GLU 688 C OE1 GLU 396 1 Y 1 A OE2 GLU 688 C OE2 GLU 396 1 Y 1 A CG GLU 694 C CG GLU 402 1 Y 1 A CD GLU 694 C CD GLU 402 1 Y 1 A OE1 GLU 694 C OE1 GLU 402 1 Y 1 A OE2 GLU 694 C OE2 GLU 402 1 Y 1 A CG ARG 695 C CG ARG 403 1 Y 1 A CD ARG 695 C CD ARG 403 1 Y 1 A NE ARG 695 C NE ARG 403 1 Y 1 A CZ ARG 695 C CZ ARG 403 1 Y 1 A NH1 ARG 695 C NH1 ARG 403 1 Y 1 A NH2 ARG 695 C NH2 ARG 403 1 Y 1 A CG GLN 698 C CG GLN 406 1 Y 1 A CD GLN 698 C CD GLN 406 1 Y 1 A OE1 GLN 698 C OE1 GLN 406 1 Y 1 A NE2 GLN 698 C NE2 GLN 406 1 Y 1 A OG SER 699 C OG SER 407 1 Y 1 A CG ARG 704 C CG ARG 412 1 Y 1 A CD ARG 704 C CD ARG 412 1 Y 1 A NE ARG 704 C NE ARG 412 1 Y 1 A CZ ARG 704 C CZ ARG 412 1 Y 1 A NH1 ARG 704 C NH1 ARG 412 1 Y 1 A NH2 ARG 704 C NH2 ARG 412 1 Y 1 A CG LYS 709 C CG LYS 417 1 Y 1 A CD LYS 709 C CD LYS 417 1 Y 1 A CE LYS 709 C CE LYS 417 1 Y 1 A NZ LYS 709 C NZ LYS 417 1 Y 1 A CG GLU 713 C CG GLU 421 1 Y 1 A CD GLU 713 C CD GLU 421 1 Y 1 A OE1 GLU 713 C OE1 GLU 421 1 Y 1 A OE2 GLU 713 C OE2 GLU 421 1 Y 1 A CG ARG 716 C CG ARG 424 1 Y 1 A CD ARG 716 C CD ARG 424 1 Y 1 A NE ARG 716 C NE ARG 424 1 Y 1 A CZ ARG 716 C CZ ARG 424 1 Y 1 A NH1 ARG 716 C NH1 ARG 424 1 Y 1 A NH2 ARG 716 C NH2 ARG 424 1 Y 1 A CG GLU 774 C CG GLU 482 1 Y 1 A CD GLU 774 C CD GLU 482 1 Y 1 A OE1 GLU 774 C OE1 GLU 482 1 Y 1 A OE2 GLU 774 C OE2 GLU 482 1 Y 1 A CG LYS 793 C CG LYS 501 1 Y 1 A CD LYS 793 C CD LYS 501 1 Y 1 A CE LYS 793 C CE LYS 501 1 Y 1 A NZ LYS 793 C NZ LYS 501 1 Y 1 A CG GLU 794 C CG GLU 502 1 Y 1 A CD GLU 794 C CD GLU 502 1 Y 1 A OE1 GLU 794 C OE1 GLU 502 1 Y 1 A OE2 GLU 794 C OE2 GLU 502 1 Y 1 A CG GLU 820 C CG GLU 528 1 Y 1 A CD GLU 820 C CD GLU 528 1 Y 1 A OE1 GLU 820 C OE1 GLU 528 1 Y 1 A OE2 GLU 820 C OE2 GLU 528 1 Y 1 A GLU 832 C GLU 540 1 Y 1 B DC 103 0.062 SIDE CHAIN 1 C DG 214 0.057 SIDE CHAIN 1 -14.34 1.50 119.30 104.96 A A A C N CA ASP PRO PRO 578 579 579 Y 1 13.65 2.10 128.40 142.05 A A A C N CD ASP PRO PRO 578 579 579 Y 1 9.19 1.50 119.30 128.49 A A A C N CA PHE PRO PRO 700 701 701 Y 1 A A O O HOH HOH 3095 3095 1.64 1_555 6_555 1 A TRP 299 -18.37 -67.37 1 A PRO 300 -38.89 102.31 1 A LEU 321 -69.94 94.53 1 A THR 399 -111.52 -166.81 1 A VAL 433 -122.19 -68.22 1 A HIS 480 177.30 152.94 1 A PHE 482 176.51 164.42 1 A TYR 545 -123.98 -58.19 1 A ASP 578 53.18 -134.70 1 A VAL 586 -154.40 -20.76 1 A GLN 613 37.57 39.56 1 A HIS 784 71.98 -54.59 PROTEIN_REP.PARAM TOPHCSDX.PRO DNA_MOD_DDCTP.PARAM TOP_NDBX_MOD.DNA 20.6 BULK SOLVENT MODEL USED 0.2750000 0.008 0.2180000 0.2180000 2.3 30.0 1311 26228 5.0 95.9 RANDOM 10000000.0 0.001 1 RESTRAINED THROUGHOUT 2.0 MOLECULAR REPLACEMENT 0.34 0.27 5.0 0.32 0.3 2.3 30.0 149 4874 29 528 4168 0.007 1.4 23.8 0.87 1.01 1.5 1.54 2.0 1.89 2.0 3.05 2.5 0.3410000 0.02 0.2730000 2.44 197 3853 6 4.9 90.3 14.0 2.3 30.0 3KTQ 26341 1.0 0.0600000 6.0000000 1 8.0 96.3 refinement X-PLOR 3.851 data scaling SCALEPACK CRYSTAL STRUCTURE OF AN ACTIVE TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 6 N N 6 N N 6 N N A PRO 338 C PRO 46 HELX_P A ASP 344 C ASP 52 1 1 7 A ALA 353 C ALA 61 HELX_P A GLU 363 C GLU 71 1 2 11 A PRO 373 C PRO 81 HELX_P A LEU 380 C LEU 88 1 3 8 A PRO 387 C PRO 95 HELX_P A TYR 394 C TYR 102 1 4 8 A ALA 402 C ALA 110 HELX_P A ARG 419 C ARG 127 1 5 18 A GLU 424 C GLU 132 HELX_P A GLU 432 C GLU 140 1 6 9 A GLU 434 C GLU 142 HELX_P A THR 447 C THR 155 1 7 14 A VAL 453 C VAL 161 HELX_P A ALA 478 C ALA 186 1 8 26 A ARG 487 C ARG 195 HELX_P A PHE 495 C PHE 203 1 9 9 A ALA 516 C ALA 224 HELX_P A LEU 522 C LEU 230 1 10 7 A PRO 527 C PRO 235 HELX_P A THR 544 C THR 252 1 11 18 A LEU 549 C LEU 257 HELX_P A LEU 552 C LEU 260 5 12 4 A PRO 589 C PRO 297 HELX_P A ALA 597 C ALA 305 1 13 9 A ILE 614 C ILE 322 HELX_P A SER 623 C SER 331 1 14 10 A GLU 626 C GLU 334 HELX_P A GLN 633 C GLN 341 1 15 8 A ILE 638 C ILE 346 HELX_P A MET 646 C MET 354 1 16 9 A ARG 651 C ARG 359 HELX_P A ALA 653 C ALA 361 5 17 3 A PRO 656 C PRO 364 HELX_P A LEU 670 C LEU 378 1 18 15 A ALA 675 C ALA 383 HELX_P A LEU 682 C LEU 390 1 19 8 A TYR 686 C TYR 394 HELX_P A SER 699 C SER 407 1 20 14 A PRO 701 C PRO 409 HELX_P A ARG 717 C ARG 425 1 21 17 A PRO 731 C PRO 439 HELX_P A GLU 734 C GLU 442 5 22 4 A LYS 738 C LYS 446 HELX_P A MET 775 C MET 483 1 23 38 A LYS 793 C LYS 501 HELX_P A GLU 808 C GLU 516 5 24 16 covale 1.607 both B DC 111 A O3' DC 11 1_555 B DOC 112 A P DOC 12 1_555 metalc 2.389 A DCT 113 F O2A DCT 1_555 A MG 901 D MG MG 1_555 metalc 2.211 A DCT 113 F O2B DCT 1_555 A MG 901 D MG MG 1_555 metalc 3.144 A DCT 113 F O3B DCT 1_555 A MG 901 D MG MG 1_555 metalc 2.270 A DCT 113 F O1G DCT 1_555 A MG 901 D MG MG 1_555 metalc 2.236 A DCT 113 F O2A DCT 1_555 A MG 902 E MG MG 1_555 metalc 2.093 A ASP 610 C OD1 ASP 318 1_555 A MG 901 D MG MG 1_555 metalc 2.375 A ASP 610 C OD2 ASP 318 1_555 A MG 902 E MG MG 1_555 metalc 2.236 A TYR 611 C O TYR 319 1_555 A MG 901 D MG MG 1_555 metalc 2.119 A ASP 785 C OD2 ASP 493 1_555 A MG 901 D MG MG 1_555 metalc 2.486 A ASP 785 C OD1 ASP 493 1_555 A MG 902 E MG MG 1_555 metalc 2.533 A MG 902 E MG MG 1_555 A HOH 3003 I O HOH 1_555 metalc 2.203 A MG 902 E MG MG 1_555 A HOH 3125 I O HOH 1_555 hydrog WATSON-CRICK B DG 101 A N1 DG 1 1_555 C DC 216 B N3 DC 14 1_555 hydrog WATSON-CRICK B DG 101 A N2 DG 1 1_555 C DC 216 B O2 DC 14 1_555 hydrog WATSON-CRICK B DG 101 A O6 DG 1 1_555 C DC 216 B N4 DC 14 1_555 hydrog WATSON-CRICK B DA 102 A N1 DA 2 1_555 C DT 215 B N3 DT 13 1_555 hydrog WATSON-CRICK B DA 102 A N6 DA 2 1_555 C DT 215 B O4 DT 13 1_555 hydrog DC-DG PAIR B DC 103 A O2 DC 3 1_555 C DG 214 B N1 DG 12 1_555 hydrog DC-DG PAIR B DC 104 A O2 DC 4 1_555 C DG 213 B N2 DG 11 1_555 hydrog WATSON-CRICK B DA 105 A N1 DA 5 1_555 C DT 212 B N3 DT 10 1_555 hydrog WATSON-CRICK B DA 105 A N6 DA 5 1_555 C DT 212 B O4 DT 10 1_555 hydrog WATSON-CRICK B DC 106 A N3 DC 6 1_555 C DG 211 B N1 DG 9 1_555 hydrog WATSON-CRICK B DC 106 A N4 DC 6 1_555 C DG 211 B O6 DG 9 1_555 hydrog WATSON-CRICK B DC 106 A O2 DC 6 1_555 C DG 211 B N2 DG 9 1_555 hydrog WATSON-CRICK B DG 107 A N1 DG 7 1_555 C DC 210 B N3 DC 8 1_555 hydrog WATSON-CRICK B DG 107 A N2 DG 7 1_555 C DC 210 B O2 DC 8 1_555 hydrog WATSON-CRICK B DG 107 A O6 DG 7 1_555 C DC 210 B N4 DC 8 1_555 hydrog WATSON-CRICK B DG 108 A N1 DG 8 1_555 C DC 209 B N3 DC 7 1_555 hydrog WATSON-CRICK B DG 108 A N2 DG 8 1_555 C DC 209 B O2 DC 7 1_555 hydrog WATSON-CRICK B DG 108 A O6 DG 8 1_555 C DC 209 B N4 DC 7 1_555 hydrog WATSON-CRICK B DC 109 A N3 DC 9 1_555 C DG 208 B N1 DG 6 1_555 hydrog WATSON-CRICK B DC 109 A N4 DC 9 1_555 C DG 208 B O6 DG 6 1_555 hydrog WATSON-CRICK B DC 109 A O2 DC 9 1_555 C DG 208 B N2 DG 6 1_555 hydrog WATSON-CRICK B DG 110 A N1 DG 10 1_555 C DC 207 B N3 DC 5 1_555 hydrog WATSON-CRICK B DG 110 A N2 DG 10 1_555 C DC 207 B O2 DC 5 1_555 hydrog WATSON-CRICK B DG 110 A O6 DG 10 1_555 C DC 207 B N4 DC 5 1_555 hydrog WATSON-CRICK B DC 111 A N3 DC 11 1_555 C DG 206 B N1 DG 4 1_555 hydrog WATSON-CRICK B DC 111 A N4 DC 11 1_555 C DG 206 B O6 DG 4 1_555 hydrog WATSON-CRICK B DC 111 A O2 DC 11 1_555 C DG 206 B N2 DG 4 1_555 hydrog WATSON-CRICK B DOC 112 A N3 DOC 12 1_555 C DG 205 B N1 DG 3 1_555 hydrog WATSON-CRICK B DOC 112 A N4 DOC 12 1_555 C DG 205 B O6 DG 3 1_555 hydrog WATSON-CRICK B DOC 112 A O2 DOC 12 1_555 C DG 205 B N2 DG 3 1_555 TRANSFERASE/DNA LARGE FRAGEMENT OF TAQ DNA POLYMERASE I, PROTEIN/DNA, TRANSFERASE-DNA COMPLEX DPO1_THEAQ UNP 3 P19821 3KTQ PDB 1 3KTQ 3KTQ PDB 2 3KTQ 293 832 3KTQ 293 832 P19821 A 1 1 540 101 112 3KTQ 101 112 3KTQ B 2 1 12 203 216 3KTQ 203 216 3KTQ C 3 1 14 4 2 4 2 parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 295 C GLU 3 A PRO 298 C PRO 6 A ARG 331 C ARG 39 A ALA 335 C ALA 43 A LEU 321 C LEU 29 A ARG 328 C ARG 36 A PHE 306 C PHE 14 A LEU 311 C LEU 19 A ARG 563 C ARG 271 A ASN 565 C ASN 273 A SER 575 C SER 283 A SER 577 C SER 285 A VAL 819 C VAL 527 A GLY 824 C GLY 532 A TRP 604 C TRP 312 A TYR 611 C TYR 319 A GLU 786 C GLU 494 A PRO 792 C PRO 500 A ARG 778 C ARG 486 A GLN 782 C GLN 490 A TYR 719 C TYR 427 A GLU 721 C GLU 429 A ARG 727 C ARG 435 A TYR 729 C TYR 437 BINDING SITE FOR RESIDUE MG A 901 A MG 901 Software 4 BINDING SITE FOR RESIDUE MG A 902 A MG 902 Software 6 BINDING SITE FOR RESIDUE DCT A 113 A DCT 113 Software 22 A DCT 113 F DCT 4 1_555 A ASP 610 C ASP 318 4 1_555 A TYR 611 C TYR 319 4 1_555 A ASP 785 C ASP 493 4 1_555 A DCT 113 F DCT 6 1_555 A ASP 610 C ASP 318 6 1_555 A ASP 785 C ASP 493 6 1_555 A HOH 3003 I HOH 6 1_555 A HOH 3125 I HOH 6 1_555 B DOC 112 A DOC 12 6 1_555 A ARG 573 C ARG 281 22 1_555 A ASP 610 C ASP 318 22 1_555 A TYR 611 C TYR 319 22 1_555 A SER 612 C SER 320 22 1_555 A GLN 613 C GLN 321 22 1_555 A ILE 614 C ILE 322 22 1_555 A GLU 615 C GLU 323 22 1_555 A HIS 639 C HIS 347 22 1_555 A ARG 659 C ARG 367 22 1_555 A LYS 663 C LYS 371 22 1_555 A PHE 667 C PHE 375 22 1_555 A ASP 785 C ASP 493 22 1_555 A MG 901 D MG 22 1_555 A MG 902 E MG 22 1_555 A HOH 3003 I HOH 22 1_555 A HOH 3011 I HOH 22 1_555 A HOH 3014 I HOH 22 1_555 A HOH 3102 I HOH 22 1_555 A HOH 3111 I HOH 22 1_555 B DOC 112 A DOC 12 22 1_555 C DG 204 B DG 2 22 1_555 C DG 205 B DG 3 22 1_555 152 P 31 2 1