0.015948 0.000000 0.000000 0.000000 0.015948 0.000000 0.000000 0.000000 0.006279 0.00000 0.00000 0.00000 Montange, R.K. Batey, R.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 62.702 62.702 159.260 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking Ba 2 137.327 BARIUM ION non-polymer C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking H2 O 18.015 WATER non-polymer C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N BA N 39 N O N 40 N P N 41 N O N 42 N O N 43 N O N 44 N C N 45 R C N 46 N O N 47 S C N 48 N O N 49 R C N 50 N O N 51 R C N 52 N N N 53 N C N 54 N O N 55 N N N 56 N C N 57 N N N 58 N C N 59 N C N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N C N 80 R C N 81 N O N 82 S C N 83 N O N 84 R C N 85 N O N 86 R C Y 87 N N Y 88 N C Y 89 N N Y 90 N C N 91 N C N 92 N O N 93 N N N 94 N C N 95 N N N 96 N N Y 97 N C N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N O N 113 N H N 114 N H N 115 N O N 116 N P N 117 N O N 118 N O N 119 N O N 120 N C N 121 R C N 122 N O N 123 S C N 124 N O N 125 R C N 126 N O N 127 R C N 128 N N N 129 N C N 130 N O N 131 N N N 132 N C N 133 N O N 134 N C N 135 N C N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing Y 100 N sing Y 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N doub N 151 N sing N 152 N sing UK Structure STRUE6 2005 0969-2126 18 787 797 10.1016/j.str.2010.04.006 20637415 Free state conformational sampling of the SAM-I riboswitch aptamer domain. 2010 10.2210/pdb3iqp/pdb pdb_00003iqp 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 100 1 IMAGE PLATE 2006-08-04 RIGAKU RAXIS IV++ Ni FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 30569.322 SAM-I riboswitch 1 syn polymer 137.327 BARIUM ION 10 syn non-polymer 18.015 water 95 nat water no no GGCUUAUCAAGAGAGGUGGAGGGACUGGCCCGAUGAAACCCGGCAACCAGAAAUGGUGCCAAUUCCUGCAGCGGAAACGU UGAAAGAUGAGCCG GGCUUAUCAAGAGAGGUGGAGGGACUGGCCCGAUGAAACCCGGCAACCAGAAAUGGUGCCAAUUCCUGCAGCGGAAACGU UGAAAGAUGAGCCG A polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2.56 51.96 hanging drop 7.0 pH 7.0, hanging drop, temperature 293K 293 5.617 1 19 A 1 A 93 0.339 A_G1:C93_A 1 5.713 -0.334 0.277 -0.069 -1.949 1 19 A 2 A 92 0.964 A_G2:C92_A 2 -16.548 -0.166 -0.214 -0.259 3.650 1 19 A 3 A 91 4.373 A_C3:G91_A 3 -14.528 0.101 -0.555 -0.166 -11.372 1 20 A 4 A 90 6.560 A_U4:A90_A 4 -2.789 -0.008 0.135 -0.154 -5.612 1 28 A 5 A 89 9.087 A_U5:G89_A 5 -6.488 1.777 0.342 -0.283 6.568 1 20 A 6 A 88 6.296 A_A6:U88_A 6 -16.559 0.093 0.266 -0.087 0.107 1 20 A 7 A 87 -3.979 A_U7:A87_A 7 -12.796 -0.238 0.365 0.001 8.744 1 19 A 8 A 86 -5.008 A_C8:G86_A 8 -12.100 0.257 0.351 -0.277 -15.786 1 20 A 64 A 85 3.468 A_U64:A85_A 9 -16.831 -0.010 0.323 -0.078 11.284 5 11 A 35 A 20 5.331 A_G35:A20_A 10 10.919 6.363 0.999 -3.750 -23.101 10 11 A 36 A 19 -8.256 A_A36:G19_A 11 -3.327 -6.324 0.045 -5.053 8.662 9 11 A 37 A 18 -5.997 A_A37:G18_A 12 -2.387 -6.693 -0.113 -4.174 14.058 1 20 A 38 A 17 10.083 A_A38:U17_A 13 2.573 -0.296 0.074 -0.170 13.267 1 19 A 39 A 16 4.337 A_C39:G16_A 14 3.616 0.237 -0.875 -0.035 0.298 1 19 A 40 A 15 2.543 A_C40:G15_A 15 15.503 0.264 0.010 -0.111 -4.719 1 19 A 41 A 13 7.506 A_C41:G13_A 16 -3.558 0.199 0.737 -0.046 -1.080 1 19 A 42 A 60 1.361 A_G42:C60_A 17 -7.108 -0.374 0.061 -0.166 -8.852 1 19 A 43 A 59 4.207 A_G43:C59_A 18 -25.965 -0.147 -0.190 -0.192 -15.963 1 19 A 44 A 58 -10.435 A_C44:G58_A 19 -12.474 0.355 0.715 -0.139 9.533 1 20 A 46 A 57 -12.613 A_A46:U57_A 20 -7.434 -0.853 -0.029 -0.107 20.833 1 A 47 A 56 -9.271 A_C47:G56_A 21 -10.494 0.846 -0.775 -0.051 4.790 1 19 A 48 A 55 -1.982 A_C48:G55_A 22 -3.601 0.137 -0.223 -0.044 10.523 1 20 A 49 A 54 -0.729 A_A49:U54_A 23 4.322 -0.165 0.108 -0.120 18.473 A 50 A 53 -25.019 A_G50:A53_A 24 9.036 7.022 0.060 -4.686 -0.449 1 19 A 21 A 31 1.781 A_G21:C31_A 25 -2.515 -0.274 0.107 -0.161 -2.952 1 19 A 22 A 30 -0.401 A_G22:C30_A 26 4.723 0.115 0.146 -0.165 6.138 1 19 A 23 A 29 -1.863 A_G23:C29_A 27 0.370 -0.068 0.217 -0.025 5.857 1 19 A 65 A 28 -3.131 A_C65:G28_A 28 -17.710 0.198 0.368 -0.214 -0.007 1 19 A 66 A 27 3.089 A_C66:G27_A 29 -12.929 0.193 0.027 -0.144 2.027 1 16 A 67 A 26 9.043 A_U67:U26_A 30 -18.468 2.645 0.394 -2.102 -16.207 1 19 A 68 A 25 8.350 A_G68:C25_A 31 -34.500 -0.372 -0.651 -0.173 -14.740 1 19 A 69 A 82 3.252 A_C69:G82_A 32 14.655 0.162 0.873 -0.098 3.058 1 20 A 70 A 81 -1.987 A_A70:U81_A 33 -11.088 -0.167 0.256 -0.205 0.472 1 28 A 71 A 80 5.055 A_G71:U80_A 34 -3.157 -1.684 0.270 -0.526 -0.149 1 19 A 72 A 79 4.737 A_C72:G79_A 35 -10.560 0.138 0.047 0.001 -0.769 1 19 A 73 A 78 -3.372 A_G73:C78_A 36 6.069 -0.128 -0.197 -0.129 19.980 A 74 A 77 -17.180 A_G74:A77_A 37 -0.844 7.329 1.814 -5.534 2.817 36.341 A A 1 2 14.980 A A 93 92 3.351 9.234 0.461 -1.863 AA_G1G2:C92C93_AA 1 3.426 -5.557 35.024 -4.225 -0.280 3.219 33.143 A A 2 3 -4.415 A A 92 91 3.121 -2.516 -0.746 -1.496 AA_G2C3:G91C92_AA 2 0.169 -0.296 33.050 -2.211 1.336 2.705 33.687 A A 3 4 25.503 A A 91 90 3.663 14.317 0.540 -1.378 AA_C3U4:A90G91_AA 3 -2.745 4.889 30.452 -4.770 -1.391 2.712 39.197 A A 4 5 18.394 A A 90 89 3.059 12.150 0.291 -0.715 AA_U4U5:G89A90_AA 4 1.071 -1.621 37.322 -2.382 -0.318 2.405 28.865 A A 5 6 17.471 A A 89 88 2.921 8.568 -0.205 -1.218 AA_U5A6:U88G89_AA 5 2.933 -5.980 27.436 -4.038 0.957 2.310 35.063 A A 6 7 26.644 A A 88 87 3.232 15.512 -0.581 -1.481 AA_A6U7:A87U88_AA 6 -2.647 4.547 31.433 -4.547 0.609 2.540 32.874 A A 7 8 13.646 A A 87 86 2.991 7.651 -0.012 -1.622 AA_U7C8:G86A87_AA 7 1.931 -3.444 31.938 -3.990 0.305 3.689 40.975 A A 8 64 4.695 A A 86 85 3.739 3.279 -1.116 -1.550 AA_C8U64:A85G86_AA 8 -3.574 5.117 40.699 -2.623 1.149 1.462 -11.992 A A 35 36 28.026 A A 20 19 4.091 -5.386 -1.622 -2.023 AA_G35A36:G19A20_AA 9 -5.588 -29.075 -9.149 16.439 -14.774 3.154 36.254 A A 36 37 -4.391 A A 19 18 3.019 -2.699 -0.782 -0.601 AA_A36A37:G18G19_AA 10 -9.686 15.760 34.877 -0.601 -0.051 2.970 60.238 A A 37 38 6.015 A A 18 17 3.162 6.009 0.489 -0.893 AA_A37A38:U17G18_AA 11 -9.188 9.197 59.322 -1.169 -0.914 3.274 34.685 A A 38 39 1.800 A A 17 16 3.505 1.064 -0.401 -1.801 AA_A38C39:G16U17_AA 12 7.903 -13.370 33.783 -3.193 1.946 2.339 32.790 A A 39 40 22.385 A A 16 15 3.535 12.280 0.172 -2.375 AA_C39C40:G15G16_AA 13 -5.603 10.214 29.952 -6.195 -1.212 3.056 48.058 A A 40 41 2.456 A A 15 13 3.147 1.999 3.581 -1.618 AA_C40C41:G13G15_AA 14 -0.354 0.434 48.018 -2.136 -4.424 3.075 43.960 A A 41 42 4.515 A A 13 60 3.220 3.377 0.894 -1.614 AA_C41G42:C60G13_AA 15 -0.908 1.214 43.827 -2.463 -1.277 3.257 36.562 A A 42 43 8.550 A A 60 59 3.500 5.341 0.707 -1.785 AA_G42G43:C59C60_AA 16 2.948 -4.719 36.067 -3.611 -0.704 3.655 40.263 A A 43 44 -3.414 A A 59 58 3.466 -2.334 -1.019 -1.139 AA_G43C44:G58C59_AA 17 -8.105 11.855 39.405 -1.364 0.470 1.722 42.446 A A 44 46 1.955 A A 58 57 2.647 1.401 -3.219 -2.794 AA_C44A46:U57G58_AA 18 10.485 -14.623 41.166 -3.955 5.169 3.108 41.495 A A 46 47 -2.202 A A 57 56 3.137 -1.557 -0.685 -1.529 AA_A46C47:G56U57_AA 19 4.258 -6.021 41.258 -2.000 1.401 2.713 30.539 A A 47 48 22.981 A A 56 55 3.813 11.790 0.538 -2.006 AA_C47C48:G55G56_AA 20 -2.526 4.923 28.110 -6.246 -1.544 2.546 28.883 A A 48 49 11.222 A A 55 54 3.023 5.564 0.759 -2.204 AA_C48A49:U54G55_AA 21 -0.224 0.451 28.352 -5.482 -1.564 3.161 53.073 A A 49 50 2.251 A A 54 53 3.152 2.011 -2.408 -1.339 AA_A49G50:A53U54_AA 22 -1.399 1.567 53.021 -1.623 2.608 3.210 33.109 A A 21 22 0.661 A A 31 30 3.234 0.377 0.117 -2.290 AA_G21G22:C30C31_AA 23 0.577 -1.012 33.102 -4.082 -0.110 2.756 24.295 A A 22 23 3.394 A A 30 29 2.943 1.426 -0.518 -2.321 AA_G22G23:C29C30_AA 24 1.844 -4.389 24.184 -5.908 1.739 3.559 49.165 A A 23 65 -5.418 A A 29 28 3.323 -4.498 -2.212 -1.090 AA_G23C65:G28C29_AA 25 -3.879 4.673 48.827 -0.954 2.351 2.978 32.143 A A 65 66 11.533 A A 28 27 3.330 6.344 -0.443 -1.416 AA_C65C66:G27G28_AA 26 1.119 -2.033 31.508 -3.664 0.995 3.161 45.077 A A 66 67 12.399 A A 27 26 3.246 9.439 0.787 -0.250 AA_C66U67:U26G27_AA 27 1.951 -2.563 44.087 -1.165 -0.853 1.637 45.816 A A 67 68 37.487 A A 26 25 3.271 26.501 -0.011 -1.288 AA_U67G68:C25U26_AA 28 18.868 -26.690 32.709 -3.712 1.479 2.002 27.920 A A 69 70 5.523 A A 82 81 2.365 2.643 -0.521 -2.172 AA_C69A70:U81G82_AA 29 5.641 -11.788 27.229 -4.928 1.989 2.321 29.790 A A 70 71 13.837 A A 81 80 2.945 7.022 0.312 -2.012 AA_A70G71:U80U81_AA 30 -4.532 8.930 28.619 -5.118 -1.385 2.866 39.509 A A 71 72 12.047 A A 80 79 3.186 8.090 -0.068 -1.307 AA_G71C72:G79U80_AA 31 0.184 -0.274 38.703 -2.823 0.121 2.964 28.981 A A 72 73 12.153 A A 79 78 3.383 6.038 -0.857 -1.824 AA_C72G73:C78G79_AA 32 -0.909 1.829 28.344 -4.954 1.516 2.138 56.034 A A 73 74 19.860 A A 78 77 2.662 18.364 -1.909 -1.417 AA_G73G74:A77C78_AA 33 -1.037 1.122 53.162 -2.303 1.987 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2010-08-04 1 1 2011-07-13 1 2 2023-09-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id SAM-I riboswitch from T. tencongensis variant A94G bond with SAM SAM-I riboswitch from T. tencongensis variant A94G/A46G bond with SAM RCSB Y RCSB 2009-08-20 REL REL BA BARIUM ION HOH water 2GIS PDB experimental model BA 301 2 BA BA 301 A BA 302 2 BA BA 302 A BA 303 2 BA BA 303 A BA 304 2 BA BA 304 A BA 305 2 BA BA 305 A BA 306 2 BA BA 306 A BA 307 2 BA BA 307 A BA 308 2 BA BA 308 A BA 309 2 BA BA 309 A BA 310 2 BA BA 310 A HOH 401 3 HOH HOH 401 A HOH 402 3 HOH HOH 402 A HOH 403 3 HOH HOH 403 A HOH 404 3 HOH HOH 404 A HOH 405 3 HOH HOH 405 A HOH 406 3 HOH HOH 406 A HOH 407 3 HOH HOH 407 A HOH 408 3 HOH HOH 408 A HOH 409 3 HOH HOH 409 A HOH 410 3 HOH HOH 410 A HOH 411 3 HOH HOH 411 A HOH 412 3 HOH HOH 412 A HOH 413 3 HOH HOH 413 A HOH 414 3 HOH HOH 414 A HOH 415 3 HOH HOH 415 A HOH 416 3 HOH HOH 416 A HOH 417 3 HOH HOH 417 A HOH 418 3 HOH HOH 418 A HOH 419 3 HOH HOH 419 A HOH 420 3 HOH HOH 420 A HOH 421 3 HOH HOH 421 A HOH 422 3 HOH HOH 422 A HOH 423 3 HOH HOH 423 A HOH 424 3 HOH HOH 424 A HOH 425 3 HOH HOH 425 A HOH 426 3 HOH HOH 426 A HOH 427 3 HOH HOH 427 A HOH 428 3 HOH HOH 428 A HOH 429 3 HOH HOH 429 A HOH 430 3 HOH HOH 430 A HOH 431 3 HOH HOH 431 A HOH 432 3 HOH HOH 432 A HOH 433 3 HOH HOH 433 A HOH 434 3 HOH HOH 434 A HOH 435 3 HOH HOH 435 A HOH 436 3 HOH HOH 436 A HOH 437 3 HOH HOH 437 A HOH 438 3 HOH HOH 438 A HOH 439 3 HOH HOH 439 A HOH 440 3 HOH HOH 440 A HOH 441 3 HOH HOH 441 A HOH 442 3 HOH HOH 442 A HOH 443 3 HOH HOH 443 A HOH 444 3 HOH HOH 444 A HOH 445 3 HOH HOH 445 A HOH 446 3 HOH HOH 446 A HOH 447 3 HOH HOH 447 A HOH 448 3 HOH HOH 448 A HOH 449 3 HOH HOH 449 A HOH 450 3 HOH HOH 450 A HOH 451 3 HOH HOH 451 A HOH 452 3 HOH HOH 452 A HOH 453 3 HOH HOH 453 A HOH 454 3 HOH HOH 454 A HOH 455 3 HOH HOH 455 A HOH 456 3 HOH HOH 456 A HOH 457 3 HOH HOH 457 A HOH 458 3 HOH HOH 458 A HOH 459 3 HOH HOH 459 A HOH 460 3 HOH HOH 460 A HOH 461 3 HOH HOH 461 A HOH 462 3 HOH HOH 462 A HOH 463 3 HOH HOH 463 A HOH 464 3 HOH HOH 464 A HOH 465 3 HOH HOH 465 A HOH 466 3 HOH HOH 466 A HOH 467 3 HOH HOH 467 A HOH 468 3 HOH HOH 468 A HOH 469 3 HOH HOH 469 A HOH 470 3 HOH HOH 470 A HOH 471 3 HOH HOH 471 A HOH 472 3 HOH HOH 472 A HOH 473 3 HOH HOH 473 A HOH 474 3 HOH HOH 474 A HOH 475 3 HOH HOH 475 A HOH 476 3 HOH HOH 476 A HOH 477 3 HOH HOH 477 A HOH 478 3 HOH HOH 478 A HOH 479 3 HOH HOH 479 A HOH 480 3 HOH HOH 480 A HOH 481 3 HOH HOH 481 A HOH 482 3 HOH HOH 482 A HOH 483 3 HOH HOH 483 A HOH 484 3 HOH HOH 484 A HOH 485 3 HOH HOH 485 A HOH 486 3 HOH HOH 486 A HOH 487 3 HOH HOH 487 A HOH 488 3 HOH HOH 488 A HOH 489 3 HOH HOH 489 A HOH 490 3 HOH HOH 490 A HOH 491 3 HOH HOH 491 A HOH 492 3 HOH HOH 492 A HOH 493 3 HOH HOH 493 A HOH 494 3 HOH HOH 494 A HOH 495 3 HOH HOH 495 A G 1 n 1 G 1 A G 2 n 2 G 2 A C 3 n 3 C 3 A U 4 n 4 U 4 A U 5 n 5 U 5 A A 6 n 6 A 6 A U 7 n 7 U 7 A C 8 n 8 C 8 A A 9 n 9 A 9 A A 10 n 10 A 10 A G 11 n 11 G 11 A A 12 n 12 A 12 A G 13 n 13 G 13 A A 14 n 14 A 14 A G 15 n 15 G 15 A G 16 n 16 G 16 A U 17 n 17 U 17 A G 18 n 18 G 18 A G 19 n 19 G 19 A A 20 n 20 A 20 A G 21 n 21 G 21 A G 22 n 22 G 22 A G 23 n 23 G 23 A A 24 n 24 A 24 A C 25 n 25 C 25 A U 26 n 26 U 26 A G 27 n 27 G 27 A G 28 n 28 G 28 A C 29 n 29 C 29 A C 30 n 30 C 30 A C 31 n 31 C 31 A G 32 n 32 G 32 A A 33 n 33 A 33 A U 34 n 34 U 34 A G 35 n 35 G 35 A A 36 n 36 A 36 A A 37 n 37 A 37 A A 38 n 38 A 38 A C 39 n 39 C 39 A C 40 n 40 C 40 A C 41 n 41 C 41 A G 42 n 42 G 42 A G 43 n 43 G 43 A C 44 n 44 C 44 A A 45 n 45 A 45 A A 46 n 46 A 46 A C 47 n 47 C 47 A C 48 n 48 C 48 A A 49 n 49 A 49 A G 50 n 50 G 50 A A 51 n 51 A 51 A A 52 n 52 A 52 A A 53 n 53 A 53 A U 54 n 54 U 54 A G 55 n 55 G 55 A G 56 n 56 G 56 A U 57 n 57 U 57 A G 58 n 58 G 58 A C 59 n 59 C 59 A C 60 n 60 C 60 A A 61 n 61 A 61 A A 62 n 62 A 62 A U 63 n 63 U 63 A U 64 n 64 U 64 A C 65 n 65 C 65 A C 66 n 66 C 66 A U 67 n 67 U 67 A G 68 n 68 G 68 A C 69 n 69 C 69 A A 70 n 70 A 70 A G 71 n 71 G 71 A C 72 n 72 C 72 A G 73 n 73 G 73 A G 74 n 74 G 74 A A 75 n 75 A 75 A A 76 n 76 A 76 A A 77 n 77 A 77 A C 78 n 78 C 78 A G 79 n 79 G 79 A U 80 n 80 U 80 A U 81 n 81 U 81 A G 82 n 82 G 82 A A 83 n 83 A 83 A A 84 n 84 A 84 A A 85 n 85 A 85 A G 86 n 86 G 86 A A 87 n 87 A 87 A U 88 n 88 U 88 A G 89 n 89 G 89 A A 90 n 90 A 90 A G 91 n 91 G 91 A C 92 n 92 C 92 A C 93 n 93 C 93 A G 94 n 94 G 94 A author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric 5910 -219 28550 A A 10 A OP2 A 10 1_555 A BA 302 C BA BA 1_555 A G 11 A OP2 G 11 1_555 52.7 A A 10 A OP2 A 10 1_555 A BA 302 C BA BA 1_555 A A 62 A OP1 A 62 1_555 147.4 A G 11 A OP2 G 11 1_555 A BA 302 C BA BA 1_555 A A 62 A OP1 A 62 1_555 156.3 A A 10 A OP2 A 10 1_555 A BA 302 C BA BA 1_555 A HOH 474 L O HOH 1_555 118.3 A G 11 A OP2 G 11 1_555 A BA 302 C BA BA 1_555 A HOH 474 L O HOH 1_555 133.8 A A 62 A OP1 A 62 1_555 A BA 302 C BA BA 1_555 A HOH 474 L O HOH 1_555 57.9 A G 11 A O6 G 11 1_555 A BA 301 B BA BA 1_555 A HOH 464 L O HOH 1_555 153.8 A G 18 A O6 G 18 1_555 A BA 307 H BA BA 1_555 A HOH 420 L O HOH 1_555 128.0 A G 18 A O6 G 18 1_555 A BA 307 H BA BA 1_555 A HOH 431 L O HOH 1_555 68.4 A HOH 420 L O HOH 1_555 A BA 307 H BA BA 1_555 A HOH 431 L O HOH 1_555 163.5 A G 27 A O6 G 27 1_555 A BA 306 G BA BA 1_555 A G 28 A O6 G 28 1_555 67.4 A U 64 A O2' U 64 1_555 A BA 305 F BA BA 1_555 A U 64 A O2 U 64 1_555 62.3 A U 64 A O2' U 64 1_555 A BA 305 F BA BA 1_555 A U 67 A O4 U 67 1_555 145.2 A U 64 A O2 U 64 1_555 A BA 305 F BA BA 1_555 A U 67 A O4 U 67 1_555 148.5 A U 64 A O2' U 64 1_555 A BA 305 F BA BA 1_555 A HOH 457 L O HOH 1_555 78.2 A U 64 A O2 U 64 1_555 A BA 305 F BA BA 1_555 A HOH 457 L O HOH 1_555 64.9 A U 67 A O4 U 67 1_555 A BA 305 F BA BA 1_555 A HOH 457 L O HOH 1_555 100.3 A G 86 A O6 G 86 1_555 A BA 303 D BA BA 1_555 A HOH 462 L O HOH 1_555 72.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1 A A N7 O G HOH 74 408 1.77 1 A A O2' O G HOH 50 414 2.15 1 A A 14 0.056 SIDE CHAIN 1 A G 32 0.056 SIDE CHAIN 1 9.80 1.30 114.00 123.80 A A A N9 C1' C2' G G G 13 13 13 N 1 -7.63 1.10 112.00 104.37 A A A N9 C1' C2' A A A 14 14 14 N 1 -3.15 0.40 106.40 103.25 A A A C8 N9 C4 G G G 50 50 50 N 1 9.31 1.10 110.50 119.81 A A A O3' P OP1 G A A 50 51 51 Y 1 6.31 0.80 109.90 116.21 A A A C1' O4' C4' G G G 74 74 74 N 1 10.71 1.60 113.70 124.41 A A A C2' C3' O3' G G G 74 74 74 N 1 -7.41 1.00 102.60 95.19 A A A C4' C3' C2' G G G 74 74 74 N 1 -10.38 1.00 105.80 95.42 A A A O4' C1' C2' G G G 74 74 74 N 1 11.39 0.70 108.50 119.89 A A A O4' C1' N9 G G G 74 74 74 N 1 -5.69 0.50 111.90 106.21 A A A C2 N3 C4 G G G 74 74 74 N 1 -3.48 0.50 128.60 125.12 A A A N3 C4 C5 G G G 74 74 74 N 1 8.79 0.60 118.80 127.59 A A A C4 C5 C6 G G G 74 74 74 N 1 4.89 0.40 110.80 115.69 A A A C4 C5 N7 G G G 74 74 74 N 1 -4.75 0.50 104.30 99.55 A A A C5 N7 C8 G G G 74 74 74 N 1 6.39 0.50 113.10 119.49 A A A N7 C8 N9 G G G 74 74 74 N 1 -7.76 0.40 106.40 98.64 A A A C8 N9 C4 G G G 74 74 74 N 1 -13.71 0.60 130.40 116.69 A A A C6 C5 N7 G G G 74 74 74 N 1 12.22 0.60 119.90 132.12 A A A N1 C6 O6 G G G 74 74 74 N 1 -11.10 0.60 128.60 117.50 A A A C5 C6 O6 G G G 74 74 74 N 1 16.08 1.10 110.50 126.58 A A A O3' P OP1 G A A 74 75 75 Y 1 A A P OP3 G G 1 1 -0.074 0.012 1.607 1.533 N 1 A A O3' C3' G G 74 74 0.088 0.012 1.427 1.515 N 1 A A C5 C6 G G 74 74 -0.175 0.010 1.419 1.244 N 1 A A C6 N1 G G 74 74 -0.069 0.007 1.391 1.322 N 1 A A C5 N7 G G 74 74 -0.097 0.006 1.388 1.291 N 1 A A C6 O6 G G 74 74 -0.143 0.009 1.237 1.094 N 1 A A BA BA BA BA 310 310 1.27 1_555 7_555 1 A A N2 N2 G G 94 94 1.59 1_555 8_775 water_rep.param dna-rna_rep_revise.top ion2.param ion2.top dna-rna_rep_revise.param water.top 56.47 BULK SOLVENT MODEL USED 0.271 0.008 0.231 0.231 2.90 19.91 1237 13410 13401 9.200 99.9 1.00 1.00 1 MOLECULAR REPLACEMENT 2GIS Engh & Huber FLAT MODEL 23.95 0.25 0.47 0.36 5.00 0.63 0.58 2.90 19.91 95 2135 10 2030 0 0.009 1.50 18.60 1.57 0.380 1.500 0.670 2.000 2.000 2.500 0.3670 0.025 0.3360 3.08 210 2014 9.40 100.00 2.600 19.91 3IQP 18385 2.0 0.082 1 14.400 7.200 100.000 0.361 2.60 2.69 4.4 5.50 99.80 0.363 2.69 2.80 5.0 7.10 100.00 0.333 2.80 2.93 5.5 7.24 99.90 0.242 2.93 3.08 6.7 7.31 100.00 0.178 3.08 3.27 8.4 7.38 100.00 0.117 3.27 3.52 11.2 7.40 100.00 0.103 3.52 3.88 12.8 7.42 100.00 0.068 3.88 4.43 18.2 7.47 100.00 0.047 4.43 5.56 26.5 7.56 100.00 0.028 5.56 19.87 41.2 7.60 100.00 data scaling Jim W. Pflugrath Jim.Pflugrath@Rigaku.com Mar 19 2004 http://www.rigaku.com/software/dtrek.html d*TREK package 9.1SSI refinement Axel T. Brunger axel.brunger@yale.edu Fortran_77 http://cns-online.org/ CNS package data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.005 data reduction CrystalClear phasing CNS SAM-I riboswitch from T. tencongensis variant A94G apo form 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N metalc 2.941 A G 1 A O6 G 1 1_555 A BA 304 E BA BA 1_555 metalc 2.976 A A 10 A OP2 A 10 1_555 A BA 302 C BA BA 1_555 metalc 2.671 A G 11 A O6 G 11 1_555 A BA 301 B BA BA 1_555 metalc 3.439 A G 11 A OP2 G 11 1_555 A BA 302 C BA BA 1_555 metalc 2.915 A G 18 A O6 G 18 1_555 A BA 307 H BA BA 1_555 metalc 2.821 A G 27 A O6 G 27 1_555 A BA 306 G BA BA 1_555 metalc 3.324 A G 28 A O6 G 28 1_555 A BA 306 G BA BA 1_555 metalc 2.848 A A 62 A OP1 A 62 1_555 A BA 302 C BA BA 1_555 metalc 3.013 A U 64 A O2' U 64 1_555 A BA 305 F BA BA 1_555 metalc 3.228 A U 64 A O2 U 64 1_555 A BA 305 F BA BA 1_555 metalc 2.903 A U 67 A O4 U 67 1_555 A BA 305 F BA BA 1_555 metalc 3.351 A G 74 A O6 G 74 1_555 A BA 308 I BA BA 1_555 metalc 3.064 A G 86 A O6 G 86 1_555 A BA 303 D BA BA 1_555 metalc 2.928 A BA 301 B BA BA 1_555 A HOH 464 L O HOH 1_555 metalc 2.686 A BA 302 C BA BA 1_555 A HOH 474 L O HOH 1_555 metalc 2.564 A BA 303 D BA BA 1_555 A HOH 462 L O HOH 1_555 metalc 2.969 A BA 305 F BA BA 1_555 A HOH 457 L O HOH 1_555 metalc 3.036 A BA 307 H BA BA 1_555 A HOH 420 L O HOH 1_555 metalc 2.878 A BA 307 H BA BA 1_555 A HOH 431 L O HOH 1_555 metalc 3.450 A BA 310 K BA BA 1_555 A HOH 439 L O HOH 1_555 hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 A C 93 A N3 C 93 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 A C 93 A O2 C 93 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 A C 93 A N4 C 93 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 A C 92 A N3 C 92 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 A C 92 A O2 C 92 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 A C 92 A N4 C 92 1_555 hydrog WATSON-CRICK A C 3 A N3 C 3 1_555 A G 91 A N1 G 91 1_555 hydrog WATSON-CRICK A C 3 A N4 C 3 1_555 A G 91 A O6 G 91 1_555 hydrog WATSON-CRICK A C 3 A O2 C 3 1_555 A G 91 A N2 G 91 1_555 hydrog WATSON-CRICK A U 4 A N3 U 4 1_555 A A 90 A N1 A 90 1_555 hydrog WATSON-CRICK A U 4 A O4 U 4 1_555 A A 90 A N6 A 90 1_555 hydrog TYPE_28_PAIR A U 5 A N3 U 5 1_555 A G 89 A O6 G 89 1_555 hydrog TYPE_28_PAIR A U 5 A O2 U 5 1_555 A G 89 A N1 G 89 1_555 hydrog WATSON-CRICK A A 6 A N1 A 6 1_555 A U 88 A N3 U 88 1_555 hydrog WATSON-CRICK A A 6 A N6 A 6 1_555 A U 88 A O4 U 88 1_555 hydrog WATSON-CRICK A U 7 A N3 U 7 1_555 A A 87 A N1 A 87 1_555 hydrog WATSON-CRICK A U 7 A O4 U 7 1_555 A A 87 A N6 A 87 1_555 hydrog WATSON-CRICK A C 8 A N3 C 8 1_555 A G 86 A N1 G 86 1_555 hydrog WATSON-CRICK A C 8 A N4 C 8 1_555 A G 86 A O6 G 86 1_555 hydrog WATSON-CRICK A C 8 A O2 C 8 1_555 A G 86 A N2 G 86 1_555 hydrog G-C PAIR A G 11 A N2 G 11 1_555 A C 44 A O2 C 44 1_555 hydrog A-G MISPAIR A A 12 A N3 A 12 1_555 A G 43 A N2 G 43 1_555 hydrog WATSON-CRICK A G 13 A N1 G 13 1_555 A C 41 A N3 C 41 1_555 hydrog WATSON-CRICK A G 13 A N2 G 13 1_555 A C 41 A O2 C 41 1_555 hydrog WATSON-CRICK A G 13 A O6 G 13 1_555 A C 41 A N4 C 41 1_555 hydrog A-G MISPAIR A A 14 A N6 A 14 1_555 A G 42 A N3 G 42 1_555 hydrog WATSON-CRICK A G 15 A N1 G 15 1_555 A C 40 A N3 C 40 1_555 hydrog WATSON-CRICK A G 15 A N2 G 15 1_555 A C 40 A O2 C 40 1_555 hydrog WATSON-CRICK A G 15 A O6 G 15 1_555 A C 40 A N4 C 40 1_555 hydrog WATSON-CRICK A G 16 A N1 G 16 1_555 A C 39 A N3 C 39 1_555 hydrog WATSON-CRICK A G 16 A N2 G 16 1_555 A C 39 A O2 C 39 1_555 hydrog WATSON-CRICK A G 16 A O6 G 16 1_555 A C 39 A N4 C 39 1_555 hydrog WATSON-CRICK A U 17 A N3 U 17 1_555 A A 38 A N1 A 38 1_555 hydrog WATSON-CRICK A U 17 A O4 U 17 1_555 A A 38 A N6 A 38 1_555 hydrog TYPE_11_PAIR A G 18 A N2 G 18 1_555 A A 37 A N7 A 37 1_555 hydrog TYPE_11_PAIR A G 18 A N3 G 18 1_555 A A 37 A N6 A 37 1_555 hydrog TYPE_11_PAIR A G 19 A N2 G 19 1_555 A A 36 A N7 A 36 1_555 hydrog TYPE_11_PAIR A G 19 A N3 G 19 1_555 A A 36 A N6 A 36 1_555 hydrog TYPE_11_PAIR A A 20 A N6 A 20 1_555 A G 35 A N3 G 35 1_555 hydrog TYPE_11_PAIR A A 20 A N7 A 20 1_555 A G 35 A N2 G 35 1_555 hydrog WATSON-CRICK A G 21 A N1 G 21 1_555 A C 31 A N3 C 31 1_555 hydrog WATSON-CRICK A G 21 A N2 G 21 1_555 A C 31 A O2 C 31 1_555 hydrog WATSON-CRICK A G 21 A O6 G 21 1_555 A C 31 A N4 C 31 1_555 hydrog WATSON-CRICK A G 22 A N1 G 22 1_555 A C 30 A N3 C 30 1_555 hydrog WATSON-CRICK A G 22 A N2 G 22 1_555 A C 30 A O2 C 30 1_555 hydrog WATSON-CRICK A G 22 A O6 G 22 1_555 A C 30 A N4 C 30 1_555 hydrog WATSON-CRICK A G 23 A N1 G 23 1_555 A C 29 A N3 C 29 1_555 hydrog WATSON-CRICK A G 23 A N2 G 23 1_555 A C 29 A O2 C 29 1_555 hydrog WATSON-CRICK A G 23 A O6 G 23 1_555 A C 29 A N4 C 29 1_555 hydrog TYPE_10_PAIR A G 23 A N2 G 23 1_555 A A 62 A N1 A 62 1_555 hydrog TYPE_10_PAIR A G 23 A N3 G 23 1_555 A A 62 A N6 A 62 1_555 hydrog A-A MISPAIR A A 24 A N6 A 24 1_555 A A 85 A N3 A 85 1_555 hydrog WATSON-CRICK A C 25 A N3 C 25 1_555 A G 68 A N1 G 68 1_555 hydrog WATSON-CRICK A C 25 A N4 C 25 1_555 A G 68 A O6 G 68 1_555 hydrog WATSON-CRICK A C 25 A O2 C 25 1_555 A G 68 A N2 G 68 1_555 hydrog TYPE_16_PAIR A U 26 A N3 U 26 1_555 A U 67 A O2 U 67 1_555 hydrog TYPE_16_PAIR A U 26 A O4 U 26 1_555 A U 67 A N3 U 67 1_555 hydrog WATSON-CRICK A G 27 A N1 G 27 1_555 A C 66 A N3 C 66 1_555 hydrog WATSON-CRICK A G 27 A N2 G 27 1_555 A C 66 A O2 C 66 1_555 hydrog WATSON-CRICK A G 27 A O6 G 27 1_555 A C 66 A N4 C 66 1_555 hydrog WATSON-CRICK A G 28 A N1 G 28 1_555 A C 65 A N3 C 65 1_555 hydrog WATSON-CRICK A G 28 A N2 G 28 1_555 A C 65 A O2 C 65 1_555 hydrog WATSON-CRICK A G 28 A O6 G 28 1_555 A C 65 A N4 C 65 1_555 hydrog C-A MISPAIR A C 30 A O2 C 30 1_555 A A 61 A N6 A 61 1_555 hydrog WATSON-CRICK A G 42 A N1 G 42 1_555 A C 60 A N3 C 60 1_555 hydrog WATSON-CRICK A G 42 A N2 G 42 1_555 A C 60 A O2 C 60 1_555 hydrog WATSON-CRICK A G 42 A O6 G 42 1_555 A C 60 A N4 C 60 1_555 hydrog WATSON-CRICK A G 43 A N1 G 43 1_555 A C 59 A N3 C 59 1_555 hydrog WATSON-CRICK A G 43 A N2 G 43 1_555 A C 59 A O2 C 59 1_555 hydrog WATSON-CRICK A G 43 A O6 G 43 1_555 A C 59 A N4 C 59 1_555 hydrog WATSON-CRICK A C 44 A N3 C 44 1_555 A G 58 A N1 G 58 1_555 hydrog WATSON-CRICK A C 44 A N4 C 44 1_555 A G 58 A O6 G 58 1_555 hydrog WATSON-CRICK A C 44 A O2 C 44 1_555 A G 58 A N2 G 58 1_555 hydrog WATSON-CRICK A A 46 A N1 A 46 1_555 A U 57 A N3 U 57 1_555 hydrog WATSON-CRICK A A 46 A N6 A 46 1_555 A U 57 A O4 U 57 1_555 hydrog C-G PAIR A C 47 A N4 C 47 1_555 A G 56 A O6 G 56 1_555 hydrog WATSON-CRICK A C 48 A N3 C 48 1_555 A G 55 A N1 G 55 1_555 hydrog WATSON-CRICK A C 48 A N4 C 48 1_555 A G 55 A O6 G 55 1_555 hydrog WATSON-CRICK A C 48 A O2 C 48 1_555 A G 55 A N2 G 55 1_555 hydrog WATSON-CRICK A A 49 A N1 A 49 1_555 A U 54 A N3 U 54 1_555 hydrog WATSON-CRICK A A 49 A N6 A 49 1_555 A U 54 A O4 U 54 1_555 hydrog G-A MISPAIR A G 50 A N2 G 50 1_555 A A 53 A N7 A 53 1_555 hydrog WATSON-CRICK A U 64 A N3 U 64 1_555 A A 85 A N1 A 85 1_555 hydrog WATSON-CRICK A U 64 A O4 U 64 1_555 A A 85 A N6 A 85 1_555 hydrog WATSON-CRICK A C 69 A N3 C 69 1_555 A G 82 A N1 G 82 1_555 hydrog WATSON-CRICK A C 69 A N4 C 69 1_555 A G 82 A O6 G 82 1_555 hydrog WATSON-CRICK A C 69 A O2 C 69 1_555 A G 82 A N2 G 82 1_555 hydrog WATSON-CRICK A A 70 A N1 A 70 1_555 A U 81 A N3 U 81 1_555 hydrog WATSON-CRICK A A 70 A N6 A 70 1_555 A U 81 A O4 U 81 1_555 hydrog TYPE_28_PAIR A G 71 A N1 G 71 1_555 A U 80 A O2 U 80 1_555 hydrog TYPE_28_PAIR A G 71 A O6 G 71 1_555 A U 80 A N3 U 80 1_555 hydrog WATSON-CRICK A C 72 A N3 C 72 1_555 A G 79 A N1 G 79 1_555 hydrog WATSON-CRICK A C 72 A N4 C 72 1_555 A G 79 A O6 G 79 1_555 hydrog WATSON-CRICK A C 72 A O2 C 72 1_555 A G 79 A N2 G 79 1_555 hydrog WATSON-CRICK A G 73 A N1 G 73 1_555 A C 78 A N3 C 78 1_555 hydrog WATSON-CRICK A G 73 A N2 G 73 1_555 A C 78 A O2 C 78 1_555 hydrog WATSON-CRICK A G 73 A O6 G 73 1_555 A C 78 A N4 C 78 1_555 RNA riboswitch, SAM, kink-turn, psuedoknot, RNA 3IQP PDB 1 3IQP GGCUUAUCAAGAGAGGUGGAGGGACUGGCCCGAUGAAACCCGGCAACCAGAAAUGGUGCCAAUUCCUGCAGCGGAAACGU UGAAAGAUGAGCCG 1 94 3IQP 1 94 3IQP A 1 1 94 BINDING SITE FOR RESIDUE BA A 301 A BA 301 Software 2 BINDING SITE FOR RESIDUE BA A 302 A BA 302 Software 4 BINDING SITE FOR RESIDUE BA A 303 A BA 303 Software 3 BINDING SITE FOR RESIDUE BA A 304 A BA 304 Software 1 BINDING SITE FOR RESIDUE BA A 305 A BA 305 Software 3 BINDING SITE FOR RESIDUE BA A 306 A BA 306 Software 2 BINDING SITE FOR RESIDUE BA A 307 A BA 307 Software 4 BINDING SITE FOR RESIDUE BA A 308 A BA 308 Software 1 BINDING SITE FOR RESIDUE BA A 309 A BA 309 Software 1 A G 11 A G 11 2 1_555 A HOH 464 L HOH 2 1_555 A A 10 A A 10 4 1_555 A G 11 A G 11 4 1_555 A A 62 A A 62 4 1_555 A HOH 474 L HOH 4 1_555 A A 85 A A 85 3 1_555 A G 86 A G 86 3 1_555 A HOH 462 L HOH 3 1_555 A G 1 A G 1 1 1_555 A U 64 A U 64 3 1_555 A U 67 A U 67 3 1_555 A HOH 457 L HOH 3 1_555 A G 27 A G 27 2 1_555 A G 28 A G 28 2 1_555 A G 18 A G 18 4 1_555 A HOH 420 L HOH 4 1_555 A HOH 431 L HOH 4 1_555 A HOH 486 L HOH 4 1_555 A G 74 A G 74 1 1_555 A G 50 A G 50 1 1_555 96 P 43 21 2