0.011367 0.000000 0.000000 0.000000 0.011367 0.000000 0.000000 0.000000 0.023150 0.00000 0.00000 0.00000 Chang, C. Volkart, L. Freeman, L. Joachimiak, A. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 87.976 87.976 43.197 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N O N 221 N C N 222 N C N 223 N SE N 224 N C N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N P N 260 N O N 261 N O N 262 N O N 263 N O N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C N 269 N C N 270 N C N 271 N O N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C N 286 N O N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C N 298 N O N 299 R C N 300 N O N 301 N C N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N N Y 321 N C Y 322 N C Y 323 N C Y 324 N C Y 325 N C N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C Y 349 N C N 350 N O N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N N N 364 S C N 365 N C N 366 N O N 367 N C N 368 N C N 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N doub Y 313 N sing Y 314 N sing N 315 N sing Y 316 N sing Y 317 N doub N 318 N sing Y 319 N doub N 320 N sing Y 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N doub N 332 N sing N 333 N sing N 334 N sing N 335 N sing Y 336 N doub Y 337 N sing Y 338 N sing N 339 N sing Y 340 N doub N 341 N sing Y 342 N doub N 343 N sing Y 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N doub N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing To be Published 0353 Crystal structure of MarR family transcriptional regulator from Silicibacter pomeroyi. 10.2210/pdb3cjn/pdb pdb_00003cjn 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2007-11-21 ADSC QUANTUM 315 Double crystal SINGLE WAVELENGTH M x-ray 1 0.97935 1.0 19-ID APS 0.97935 SYNCHROTRON APS BEAMLINE 19-ID 18475.852 Transcriptional regulator, MarR family 1 man polymer 94.971 PHOSPHATE ION 1 syn non-polymer 18.015 water 142 nat water no yes SNA(MSE)AESTDQTEQLRELAEIGLEGYAPYL(MSE)NRI(MSE)GRYNANLRKE(MSE)TALGLSTAK(MSE)RALAI LSAKDGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYDRLWPH(MSE)RASHDR (MSE)FQGITPQERQAFLATLNK(MSE)LANIRVHEI SNAMAESTDQTEQLRELAEIGLEGYAPYLMNRIMGRYNANLRKEMTALGLSTAKMRALAILSAKDGLPIGTLGIFAVVEQ STLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYDRLWPHMRASHDRMFQGITPQERQAFLATLNKMLANIRVH EI A APC88806 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Silicibacter Silicibacter pomeroyi DSS-3 / DSM 15171 Escherichia sample 700808 SPO1458 246200 Silicibacter pomeroyi DSS-3 562 Escherichia coli BL21(DE3)star Plasmid pMCSG7 1 2.26 45.62 VAPOR DIFFUSION, SITTING DROP 7.0 0.1 Succinic acid pH 7.0, 12 % PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 281K 281 Midwest Center for Structural Genomics MCSG PSI, Protein Structure Initiative chem_comp_atom chem_comp_bond database_2 pdbx_entry_details pdbx_modification_feature struct_conn struct_ref_seq_dif struct_site repository Initial release Advisory Version format compliance Data collection Database references Derived calculations Structure summary 1 0 2008-03-25 1 1 2011-07-13 1 2 2024-11-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2008-03-13 REL REL PO4 PHOSPHATE ION HOH water Y A MSE 27 Named protein modification A MSE 30 MET MSE 1 1_555 Selenomethionine A MSE 31 Named protein modification A MSE 34 MET MSE 1 1_555 Selenomethionine A MSE 42 Named protein modification A MSE 45 MET MSE 1 1_555 Selenomethionine A MSE 52 Named protein modification A MSE 55 MET MSE 1 1_555 Selenomethionine A MSE 124 Named protein modification A MSE 127 MET MSE 1 1_555 Selenomethionine A MSE 131 Named protein modification A MSE 134 MET MSE 1 1_555 Selenomethionine A MSE 150 Named protein modification A MSE 153 MET MSE 1 1_555 Selenomethionine PO4 201 2 PO4 PO4 201 A HOH 1 3 HOH HOH 202 A HOH 2 3 HOH HOH 203 A HOH 3 3 HOH HOH 204 A HOH 4 3 HOH HOH 205 A HOH 5 3 HOH HOH 206 A HOH 6 3 HOH HOH 207 A HOH 7 3 HOH HOH 208 A HOH 8 3 HOH HOH 209 A HOH 9 3 HOH HOH 210 A HOH 10 3 HOH HOH 211 A HOH 11 3 HOH HOH 212 A HOH 12 3 HOH HOH 213 A HOH 13 3 HOH HOH 214 A HOH 14 3 HOH HOH 215 A HOH 15 3 HOH HOH 216 A HOH 16 3 HOH HOH 217 A HOH 17 3 HOH HOH 218 A HOH 18 3 HOH HOH 219 A HOH 19 3 HOH HOH 220 A HOH 20 3 HOH HOH 221 A HOH 21 3 HOH HOH 222 A HOH 22 3 HOH HOH 223 A HOH 23 3 HOH HOH 224 A HOH 24 3 HOH HOH 225 A HOH 25 3 HOH HOH 226 A HOH 26 3 HOH HOH 227 A HOH 27 3 HOH HOH 228 A HOH 28 3 HOH HOH 229 A HOH 29 3 HOH HOH 230 A HOH 30 3 HOH HOH 231 A HOH 31 3 HOH HOH 232 A HOH 32 3 HOH HOH 233 A HOH 33 3 HOH HOH 234 A HOH 34 3 HOH HOH 235 A HOH 35 3 HOH HOH 236 A HOH 36 3 HOH HOH 237 A HOH 37 3 HOH HOH 238 A HOH 38 3 HOH HOH 239 A HOH 39 3 HOH HOH 240 A HOH 40 3 HOH HOH 241 A HOH 41 3 HOH HOH 242 A HOH 42 3 HOH HOH 243 A HOH 43 3 HOH HOH 244 A HOH 44 3 HOH HOH 245 A HOH 45 3 HOH HOH 246 A HOH 46 3 HOH HOH 247 A HOH 47 3 HOH HOH 248 A HOH 48 3 HOH HOH 249 A HOH 49 3 HOH HOH 250 A HOH 50 3 HOH HOH 251 A HOH 51 3 HOH HOH 252 A HOH 52 3 HOH HOH 253 A HOH 53 3 HOH HOH 254 A HOH 54 3 HOH HOH 255 A HOH 55 3 HOH HOH 256 A HOH 56 3 HOH HOH 257 A HOH 57 3 HOH HOH 258 A HOH 58 3 HOH HOH 259 A HOH 59 3 HOH HOH 260 A HOH 60 3 HOH HOH 261 A HOH 61 3 HOH HOH 262 A HOH 62 3 HOH HOH 263 A HOH 63 3 HOH HOH 264 A HOH 64 3 HOH HOH 265 A HOH 65 3 HOH HOH 266 A HOH 66 3 HOH HOH 267 A HOH 67 3 HOH HOH 268 A HOH 68 3 HOH HOH 269 A HOH 69 3 HOH HOH 270 A HOH 70 3 HOH HOH 271 A HOH 71 3 HOH HOH 272 A HOH 72 3 HOH HOH 273 A HOH 73 3 HOH HOH 274 A HOH 74 3 HOH HOH 275 A HOH 75 3 HOH HOH 276 A HOH 76 3 HOH HOH 277 A HOH 77 3 HOH HOH 278 A HOH 78 3 HOH HOH 279 A HOH 79 3 HOH HOH 280 A HOH 80 3 HOH HOH 281 A HOH 81 3 HOH HOH 282 A HOH 82 3 HOH HOH 283 A HOH 83 3 HOH HOH 284 A HOH 84 3 HOH HOH 285 A HOH 85 3 HOH HOH 286 A HOH 86 3 HOH HOH 287 A HOH 87 3 HOH HOH 288 A HOH 88 3 HOH HOH 289 A HOH 89 3 HOH HOH 290 A HOH 90 3 HOH HOH 291 A HOH 91 3 HOH HOH 292 A HOH 92 3 HOH HOH 293 A HOH 93 3 HOH HOH 294 A HOH 94 3 HOH HOH 295 A HOH 95 3 HOH HOH 296 A HOH 96 3 HOH HOH 297 A HOH 97 3 HOH HOH 298 A HOH 98 3 HOH HOH 299 A HOH 99 3 HOH HOH 300 A HOH 100 3 HOH HOH 301 A HOH 101 3 HOH HOH 302 A HOH 102 3 HOH HOH 303 A HOH 103 3 HOH HOH 304 A HOH 104 3 HOH HOH 305 A HOH 105 3 HOH HOH 306 A HOH 106 3 HOH HOH 307 A HOH 107 3 HOH HOH 308 A HOH 108 3 HOH HOH 309 A HOH 109 3 HOH HOH 310 A HOH 110 3 HOH HOH 311 A HOH 111 3 HOH HOH 312 A HOH 112 3 HOH HOH 313 A HOH 113 3 HOH HOH 314 A HOH 114 3 HOH HOH 315 A HOH 115 3 HOH HOH 316 A HOH 116 3 HOH HOH 317 A HOH 117 3 HOH HOH 318 A HOH 118 3 HOH HOH 319 A HOH 119 3 HOH HOH 320 A HOH 120 3 HOH HOH 321 A HOH 121 3 HOH HOH 322 A HOH 122 3 HOH HOH 323 A HOH 123 3 HOH HOH 324 A HOH 124 3 HOH HOH 325 A HOH 125 3 HOH HOH 326 A HOH 126 3 HOH HOH 327 A HOH 127 3 HOH HOH 328 A HOH 128 3 HOH HOH 329 A HOH 129 3 HOH HOH 330 A HOH 130 3 HOH HOH 331 A HOH 131 3 HOH HOH 332 A HOH 132 3 HOH HOH 333 A HOH 133 3 HOH HOH 334 A HOH 134 3 HOH HOH 335 A HOH 135 3 HOH HOH 336 A HOH 136 3 HOH HOH 337 A HOH 137 3 HOH HOH 338 A HOH 138 3 HOH HOH 339 A HOH 139 3 HOH HOH 340 A HOH 140 3 HOH HOH 341 A HOH 141 3 HOH HOH 342 A HOH 142 3 HOH HOH 343 A n 1 -2 A n 2 -1 A n 3 0 A n 4 1 A n 5 2 A n 6 3 A n 7 4 A n 8 5 A n 9 6 A n 10 7 A n 11 8 A n 12 9 A n 13 10 A n 14 11 A ALA 12 n 15 ARG 12 A GLU 13 n 16 GLU 13 A LEU 14 n 17 LEU 14 A ALA 15 n 18 ALA 15 A GLU 16 n 19 GLU 16 A ILE 17 n 20 ILE 17 A GLY 18 n 21 GLY 18 A LEU 19 n 22 LEU 19 A GLU 20 n 23 GLU 20 A GLY 21 n 24 GLY 21 A TYR 22 n 25 TYR 22 A ALA 23 n 26 ALA 23 A PRO 24 n 27 PRO 24 A TYR 25 n 28 TYR 25 A LEU 26 n 29 LEU 26 A MSE 27 n 30 MSE 27 A ASN 28 n 31 ASN 28 A ARG 29 n 32 ARG 29 A ILE 30 n 33 ILE 30 A MSE 31 n 34 MSE 31 A GLY 32 n 35 GLY 32 A ARG 33 n 36 ARG 33 A TYR 34 n 37 TYR 34 A ASN 35 n 38 ASN 35 A ALA 36 n 39 ALA 36 A ASN 37 n 40 ASN 37 A LEU 38 n 41 LEU 38 A ARG 39 n 42 ARG 39 A LYS 40 n 43 LYS 40 A GLU 41 n 44 GLU 41 A MSE 42 n 45 MSE 42 A ALA 43 n 46 THR 43 A ALA 44 n 47 ALA 44 A LEU 45 n 48 LEU 45 A GLY 46 n 49 GLY 46 A LEU 47 n 50 LEU 47 A SER 48 n 51 SER 48 A THR 49 n 52 THR 49 A ALA 50 n 53 ALA 50 A LYS 51 n 54 LYS 51 A MSE 52 n 55 MSE 52 A ARG 53 n 56 ARG 53 A ALA 54 n 57 ALA 54 A LEU 55 n 58 LEU 55 A ALA 56 n 59 ALA 56 A ILE 57 n 60 ILE 57 A LEU 58 n 61 LEU 58 A SER 59 n 62 SER 59 A ALA 60 n 63 ALA 60 A LYS 61 n 64 LYS 61 A ASP 62 n 65 ASP 62 A GLY 63 n 66 GLY 63 A LEU 64 n 67 LEU 64 A PRO 65 n 68 PRO 65 A ILE 66 n 69 ILE 66 A GLY 67 n 70 GLY 67 A THR 68 n 71 THR 68 A LEU 69 n 72 LEU 69 A GLY 70 n 73 GLY 70 A ILE 71 n 74 ILE 71 A PHE 72 n 75 PHE 72 A ALA 73 n 76 ALA 73 A VAL 74 n 77 VAL 74 A VAL 75 n 78 VAL 75 A GLU 76 n 79 GLU 76 A GLN 77 n 80 GLN 77 A SER 78 n 81 SER 78 A THR 79 n 82 THR 79 A LEU 80 n 83 LEU 80 A SER 81 n 84 SER 81 A ARG 82 n 85 ARG 82 A ALA 83 n 86 ALA 83 A LEU 84 n 87 LEU 84 A ASP 85 n 88 ASP 85 A GLY 86 n 89 GLY 86 A LEU 87 n 90 LEU 87 A GLN 88 n 91 GLN 88 A ALA 89 n 92 ALA 89 A ASP 90 n 93 ASP 90 A GLY 91 n 94 GLY 91 A LEU 92 n 95 LEU 92 A VAL 93 n 96 VAL 93 A ARG 94 n 97 ARG 94 A ARG 95 n 98 ARG 95 A GLU 96 n 99 GLU 96 A VAL 97 n 100 VAL 97 A ASP 98 n 101 ASP 98 A n 102 99 A n 103 100 A ALA 101 n 104 ASP 101 A ALA 102 n 105 GLN 102 A ARG 103 n 106 ARG 103 A SER 104 n 107 SER 104 A SER 105 n 108 SER 105 A ARG 106 n 109 ARG 106 A VAL 107 n 110 VAL 107 A TYR 108 n 111 TYR 108 A LEU 109 n 112 LEU 109 A THR 110 n 113 THR 110 A PRO 111 n 114 PRO 111 A ALA 112 n 115 ALA 112 A GLY 113 n 116 GLY 113 A ARG 114 n 117 ARG 114 A ALA 115 n 118 ALA 115 A VAL 116 n 119 VAL 116 A TYR 117 n 120 TYR 117 A ASP 118 n 121 ASP 118 A ARG 119 n 122 ARG 119 A LEU 120 n 123 LEU 120 A TRP 121 n 124 TRP 121 A PRO 122 n 125 PRO 122 A HIS 123 n 126 HIS 123 A MSE 124 n 127 MSE 124 A ARG 125 n 128 ARG 125 A ALA 126 n 129 ALA 126 A SER 127 n 130 SER 127 A HIS 128 n 131 HIS 128 A ASP 129 n 132 ASP 129 A ARG 130 n 133 ARG 130 A MSE 131 n 134 MSE 131 A PHE 132 n 135 PHE 132 A GLN 133 n 136 GLN 133 A GLY 134 n 137 GLY 134 A ILE 135 n 138 ILE 135 A THR 136 n 139 THR 136 A PRO 137 n 140 PRO 137 A GLN 138 n 141 GLN 138 A GLU 139 n 142 GLU 139 A ARG 140 n 143 ARG 140 A GLN 141 n 144 GLN 141 A ALA 142 n 145 ALA 142 A PHE 143 n 146 PHE 143 A LEU 144 n 147 LEU 144 A ALA 145 n 148 ALA 145 A THR 146 n 149 THR 146 A LEU 147 n 150 LEU 147 A ASN 148 n 151 ASN 148 A LYS 149 n 152 LYS 149 A MSE 150 n 153 MSE 150 A LEU 151 n 154 LEU 151 A ALA 152 n 155 ALA 152 A ASN 153 n 156 ASN 153 A ILE 154 n 157 ILE 154 A ARG 155 n 158 ARG 155 A VAL 156 n 159 VAL 156 A HIS 157 n 160 HIS 157 A GLU 158 n 161 GLU 158 A ILE 159 n 162 ILE 159 A 5.6368 -0.0487 -6.4319 1.9477 -0.9280 11.1979 -0.1328 0.0160 0.2256 0.1154 0.1242 0.0041 -0.1113 -0.2850 0.0086 -0.0855 -0.0044 -0.0521 -0.0766 0.0107 -0.0743 refined 28.7941 20.8937 22.8327 X-RAY DIFFRACTION 5.1725 1.2373 -2.3614 2.3664 0.2687 3.9984 -0.0937 0.0654 0.0642 -0.1900 0.0665 0.0912 -0.1485 -0.1511 0.0272 -0.1113 -0.0056 -0.0357 -0.0854 0.0271 -0.0329 refined 6.2192 30.3322 30.0672 X-RAY DIFFRACTION 17.3069 0.9291 -4.9080 0.0608 -0.3920 2.8986 -0.2421 -0.5449 0.7257 0.0799 0.3126 -0.0707 0.2059 0.1366 -0.0705 0.0226 0.0297 -0.0666 0.0206 -0.0281 0.0054 refined 24.7760 28.5663 37.7967 X-RAY DIFFRACTION 8.7764 -0.9485 5.0470 2.0207 0.1590 4.6672 0.0549 0.2712 0.3255 -0.1319 -0.0419 -0.5277 0.0336 0.2562 -0.0130 -0.0573 -0.0096 -0.0208 -0.1655 0.0232 0.0164 refined 27.4731 37.8468 21.0356 X-RAY DIFFRACTION A 12 A 15 A 46 A 49 X-RAY DIFFRACTION 1 A 47 A 50 A 112 A 115 X-RAY DIFFRACTION 2 A 113 A 116 A 135 A 138 X-RAY DIFFRACTION 3 A 136 A 139 A 159 A 162 X-RAY DIFFRACTION 4 author_and_software_defined_assembly PISA 2 dimeric 5900 -43.6 13690 A MSE 27 SELENOMETHIONINE A MSE 30 MET A MSE 31 SELENOMETHIONINE A MSE 34 MET A MSE 42 SELENOMETHIONINE A MSE 45 MET A MSE 52 SELENOMETHIONINE A MSE 55 MET A MSE 124 SELENOMETHIONINE A MSE 127 MET A MSE 131 SELENOMETHIONINE A MSE 134 MET A MSE 150 SELENOMETHIONINE A MSE 153 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_556 y,x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 43.1970000000 A N LEU 64 A N LEU 67 A O VAL 107 A O VAL 110 A O ARG 106 A O ARG 109 A N GLU 96 A N GLU 99 1 A HOH 286 C HOH 1 A HOH 342 C HOH 1 A CG ARG 12 A CG ARG 15 1 Y 1 A CD ARG 12 A CD ARG 15 1 Y 1 A NE ARG 12 A NE ARG 15 1 Y 1 A CZ ARG 12 A CZ ARG 15 1 Y 1 A NH1 ARG 12 A NH1 ARG 15 1 Y 1 A NH2 ARG 12 A NH2 ARG 15 1 Y 1 A OG1 THR 43 A OG1 THR 46 1 Y 1 A CG2 THR 43 A CG2 THR 46 1 Y 1 A CG ASP 101 A CG ASP 104 1 Y 1 A OD1 ASP 101 A OD1 ASP 104 1 Y 1 A OD2 ASP 101 A OD2 ASP 104 1 Y 1 A CG GLN 102 A CG GLN 105 1 Y 1 A CD GLN 102 A CD GLN 105 1 Y 1 A OE1 GLN 102 A OE1 GLN 105 1 Y 1 A NE2 GLN 102 A NE2 GLN 105 1 Y 1 A SER -2 A SER 1 1 Y 1 A ASN -1 A ASN 2 1 Y 1 A ALA 0 A ALA 3 1 Y 1 A MSE 1 A MSE 4 1 Y 1 A ALA 2 A ALA 5 1 Y 1 A GLU 3 A GLU 6 1 Y 1 A SER 4 A SER 7 1 Y 1 A THR 5 A THR 8 1 Y 1 A ASP 6 A ASP 9 1 Y 1 A GLN 7 A GLN 10 1 Y 1 A THR 8 A THR 11 1 Y 1 A GLU 9 A GLU 12 1 Y 1 A GLN 10 A GLN 13 1 Y 1 A LEU 11 A LEU 14 1 Y 1 A SER 99 A SER 102 1 Y 1 A ASP 100 A ASP 103 1 Y 32.927 -0.75 0.00 0.00 -0.75 0.00 1.50 0.960 0.938 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.22257 0.17912 0.18119 0.18119 1.95 43.98 624 12819 12819 4.9 99.20 5.913 0.092 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0 SAD 0.153 0.144 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 1.95 43.98 142 1280 5 0 1133 0.014 0.022 1172 1.282 1.981 1583 5.126 5.000 148 22.835 21.923 52 12.965 15.000 209 17.392 15.000 15 0.098 0.200 178 0.005 0.020 880 0.210 0.200 535 0.303 0.200 821 0.132 0.200 106 0.266 0.200 64 0.176 0.200 19 0.857 1.500 764 1.329 2.000 1169 2.006 3.000 463 2.881 4.500 414 0.293 0.191 1.997 36 864 900 20 96.26 28.0 1.95 50 3CJN 12944 12941 -3 0.094 1 77.2 21.0 100.0 0.472 1.95 2.02 14.5 1263 1 21.8 100 refinement REFMAC 5.2.0019 data collection SBC-Collect data reduction HKL-3000 data scaling HKL-3000 phasing HKL-3000 Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi 1 N N 2 N N 3 N N A GLU 13 A GLU 16 HELX_P A GLY 18 A GLY 21 1 1 6 A LEU 19 A LEU 22 HELX_P A GLY 21 A GLY 24 5 2 3 A TYR 22 A TYR 25 HELX_P A LYS 40 A LYS 43 1 3 19 A GLU 41 A GLU 44 HELX_P A GLY 46 A GLY 49 1 4 6 A SER 48 A SER 51 HELX_P A LYS 61 A LYS 64 1 5 14 A ILE 66 A ILE 69 HELX_P A VAL 74 A VAL 77 1 6 9 A GLU 76 A GLU 79 HELX_P A ASP 90 A ASP 93 1 7 15 A THR 110 A THR 113 HELX_P A PHE 132 A PHE 135 1 8 23 A THR 136 A THR 139 HELX_P A ARG 155 A ARG 158 1 9 20 covale 1.330 both A LEU 26 A C LEU 29 1_555 A MSE 27 A N MSE 30 1_555 covale 1.339 both A MSE 27 A C MSE 30 1_555 A ASN 28 A N ASN 31 1_555 covale 1.339 both A ILE 30 A C ILE 33 1_555 A MSE 31 A N MSE 34 1_555 covale 1.327 both A MSE 31 A C MSE 34 1_555 A GLY 32 A N GLY 35 1_555 covale 1.339 both A GLU 41 A C GLU 44 1_555 A MSE 42 A N MSE 45 1_555 covale 1.334 both A MSE 42 A C MSE 45 1_555 A THR 43 A N THR 46 1_555 covale 1.334 both A LYS 51 A C LYS 54 1_555 A MSE 52 A N MSE 55 1_555 covale 1.334 both A MSE 52 A C MSE 55 1_555 A ARG 53 A N ARG 56 1_555 covale 1.334 both A HIS 123 A C HIS 126 1_555 A MSE 124 A N MSE 127 1_555 covale 1.335 both A MSE 124 A C MSE 127 1_555 A ARG 125 A N ARG 128 1_555 covale 1.337 both A ARG 130 A C ARG 133 1_555 A MSE 131 A N MSE 134 1_555 covale 1.336 both A MSE 131 A C MSE 134 1_555 A PHE 132 A N PHE 135 1_555 covale 1.324 both A LYS 149 A C LYS 152 1_555 A MSE 150 A N MSE 153 1_555 covale 1.329 both A MSE 150 A C MSE 153 1_555 A LEU 151 A N LEU 154 1_555 TRANSCRIPTION REGULATOR Transcriptional regulator, MarR family, Silicibacter pomeroyi, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, DNA-binding, Transcription regulation, TRANSCRIPTION REGULATOR Q5LTF6_SILPO UNP 1 1 Q5LTF6 MAESTDQTEQLRELAEIGLEGYAPYLMNRIMGRYNANLRKEMTALGLSTAKMRALAILSAKDGLPIGTLGIFAVVEQSTL SRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYDRLWPHMRASHDRMFQGITPQERQAFLATLNKMLANIRVHEI 1 159 3CJN 1 159 Q5LTF6 A 1 4 162 1 expression tag SER -2 3CJN A Q5LTF6 UNP 1 1 expression tag ASN -1 3CJN A Q5LTF6 UNP 2 1 expression tag ALA 0 3CJN A Q5LTF6 UNP 3 3 anti-parallel anti-parallel A LEU 64 A LEU 67 A PRO 65 A PRO 68 A SER 105 A SER 108 A LEU 109 A LEU 112 A VAL 93 A VAL 96 A VAL 97 A VAL 100 BINDING SITE FOR RESIDUE PO4 A 201 A PO4 201 Software 6 A ARG 29 A ARG 32 6 1_555 A ARG 33 A ARG 36 6 1_555 A ARG 155 A ARG 158 6 7_556 A HIS 157 A HIS 160 6 7_556 A HOH 211 C HOH 6 1_555 A HOH 285 C HOH 6 1_555 96 P 43 21 2