1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 D'Souza, V.M. Yildiz, Z. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N O N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N O N 95 N P N 96 N O N 97 N O N 98 N O N 99 N C N 100 R C N 101 N O N 102 S C N 103 N O N 104 R C N 105 N O N 106 R C N 107 N N N 108 N C N 109 N O N 110 N N N 111 N C N 112 N N N 113 N C N 114 N C N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N N N 130 R C N 131 N C N 132 N O N 133 N C N 134 N S N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N O N 144 N P N 145 N O N 146 N O N 147 N O N 148 N C N 149 R C N 150 N O N 151 S C N 152 N O N 153 R C N 154 N O N 155 R C Y 156 N N Y 157 N C Y 158 N N Y 159 N C N 160 N C N 161 N O N 162 N N N 163 N C N 164 N N N 165 N N Y 166 N C N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N N N 182 S C N 183 N C N 184 N O N 185 N C N 186 N C N 187 N C N 188 N O N 189 N N N 190 N O N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N N N 202 S C N 203 N C N 204 N O N 205 N C N 206 N C N 207 N C N 208 N O N 209 N O N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N N N 221 N C N 222 N C N 223 N O N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C Y 235 N C Y 236 N N Y 237 N C Y 238 N C Y 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N C N 281 N N N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C N 303 N C N 304 N C N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N N N 316 S C N 317 N C N 318 N O N 319 N C N 320 N O N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 R C N 334 N O N 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C Y 351 N C Y 352 N C Y 353 N C Y 354 N N Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C N 384 N O N 385 N O N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N O N 398 N P N 399 N O N 400 N O N 401 N O N 402 N C N 403 R C N 404 N O N 405 S C N 406 N O N 407 R C N 408 N O N 409 R C N 410 N N N 411 N C N 412 N O N 413 N N N 414 N C N 415 N O N 416 N C N 417 N C N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N O N 435 N C N 436 N C N 437 N C N 438 N O N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N ZN N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing Y 166 N sing Y 167 N sing Y 168 N doub N 169 N sing Y 170 N sing N 171 N sing Y 172 N doub N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing Y 239 N sing Y 240 N doub Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing Y 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing Y 351 N doub Y 352 N sing Y 353 N sing N 354 N sing Y 355 N doub Y 356 N sing Y 357 N sing N 358 N sing Y 359 N sing Y 360 N doub N 361 N sing Y 362 N doub N 363 N sing Y 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing Y 379 N doub Y 380 N sing Y 381 N sing N 382 N sing Y 383 N doub N 384 N sing Y 385 N doub N 386 N sing Y 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N doub N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing UK Nature NATUAS 0006 0028-0836 515 591 595 10.1038/nature13709 25209668 A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing. 2014 10.2210/pdb2mqv/pdb pdb_00002mqv 10.13018/BMR25052 6377.248 Nucleocapsid protein p10 1 man polymer 21893.887 RNA (68-MER) 1 syn polymer 65.409 ZINC ION 1 syn non-polymer no no ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A polypeptide(L) no no GGGCGAGGGUCUCCUCUGAGUGAUUGACUACCCGUCAGCGGGGGUCUUUCAUUUGGGGGCUCGUGCCC GGGCGAGGGUCUCCUCUGAGUGAUUGACUACCCGUCAGCGGGGGUCUUUCAUUUGGGGGCUCGUGCCC B polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 11786 Murine leukemia virus 562 Escherichia coli pCNA -28.951 1 19 B 93 B 160 -4.153 B_G93:C160_B 1 -20.631 -0.705 -0.344 -0.214 -19.640 1 19 B 94 B 159 -7.617 B_G94:C159_B 2 13.942 -0.498 -0.751 -0.319 -10.145 1 19 B 95 B 158 -2.339 B_G95:C158_B 3 -6.541 -0.018 -0.293 -0.077 -5.551 1 19 B 96 B 157 -3.232 B_C96:G157_B 4 -5.595 0.499 0.093 -0.203 6.281 1 19 B 99 B 154 -2.947 B_G99:C154_B 5 -3.350 -0.185 0.220 -0.117 13.337 B 100 B 153 -33.816 B_G100:U153_B 6 -2.436 -1.397 2.375 -0.167 -0.362 1 19 B 101 B 152 -3.206 B_G101:C152_B 7 -6.882 -0.136 0.215 -0.142 3.687 1 28 B 102 B 151 -5.566 B_U102:G151_B 8 -20.320 1.940 0.256 -0.488 2.463 1 19 B 103 B 150 -3.223 B_C103:G150_B 9 -8.219 0.189 0.154 -0.155 11.095 1 28 B 104 B 149 -5.382 B_U104:G149_B 10 -19.282 1.732 0.181 -0.466 13.659 1 19 B 105 B 148 -2.521 B_C105:G148_B 11 -11.834 0.144 -0.144 -0.104 18.657 1 19 B 106 B 147 -2.369 B_C106:G147_B 12 -13.426 0.205 -0.291 -0.091 -3.670 1 28 B 112 B 144 -4.164 B_G112:U144_B 13 0.503 -2.083 -0.131 -0.426 -5.622 1 20 B 113 B 143 -2.272 B_U113:A143_B 14 -8.810 -0.113 -0.177 -0.052 -10.484 1 19 B 114 B 142 -2.871 B_G114:C142_B 15 -11.488 -0.116 -0.014 -0.112 6.060 1 20 B 115 B 141 -3.268 B_A115:U141_B 16 -7.348 0.110 0.192 -0.051 -3.183 1 16 B 116 B 140 11.003 B_U116:U140_B 17 -17.955 -1.992 0.359 -1.815 11.346 1 16 B 117 B 139 11.756 B_U117:U139_B 18 -32.460 2.046 0.363 -1.845 21.983 1 19 B 118 B 138 -2.557 B_G118:C138_B 19 9.838 -0.143 0.484 -0.071 17.895 1 20 B 119 B 137 0.991 B_A119:U137_B 20 -21.345 -0.271 -0.371 -0.176 25.873 1 19 B 120 B 136 -1.229 B_C120:G136_B 21 -16.635 0.448 -0.739 -0.136 -4.696 1 28 B 121 B 135 17.849 B_U121:G135_B 22 -30.733 2.474 -0.825 -0.732 1.417 1 19 B 123 B 134 -2.235 B_C123:G134_B 23 -7.478 0.448 -0.261 -0.205 -1.016 1 19 B 124 B 133 -2.599 B_C124:G133_B 24 4.966 0.320 0.099 -0.154 4.949 1 19 B 125 B 132 -1.084 B_C125:G132_B 25 -10.916 0.411 -0.447 -0.210 -9.259 1 19 B 126 B 131 -1.051 B_G126:C131_B 26 -16.234 -0.337 -0.366 -0.177 -6.811 2 B 127 B 130 -126.148 B_U127:G130_B 27 0.492 0.120 1.237 -5.767 -1.199 175.531 B B 93 94 89.249 B B 160 159 0.464 175.260 5.561 -1.298 BB_G93G94:C159C160_BB 1 -3.658 1.863 36.220 -0.383 -2.777 2.603 33.929 B B 94 95 26.744 B B 159 158 3.493 15.073 0.586 -1.123 BB_G94G95:C158C159_BB 2 -2.669 4.735 30.370 -4.312 -1.428 2.427 36.417 B B 95 96 24.327 B B 158 157 3.264 14.791 0.318 -1.463 BB_G95C96:G157C158_BB 3 0.634 -1.042 33.366 -4.214 -0.428 3.814 27.545 B B 99 100 31.962 B B 154 153 3.986 14.068 -1.907 -0.001 BB_G99G100:U153C154_BB 4 -10.571 24.018 21.275 -4.660 0.505 3.683 42.414 B B 100 101 20.066 B B 153 152 4.189 14.198 1.294 -1.347 BB_G100G101:C152U153_BB 5 6.934 -9.801 39.487 -3.670 -0.905 2.594 44.460 B B 101 102 21.020 B B 152 151 3.147 15.599 0.175 -1.107 BB_G101U102:G151C152_BB 6 -0.042 0.056 41.765 -2.772 -0.234 2.461 31.074 B B 102 103 35.517 B B 151 150 3.570 17.843 0.420 -0.889 BB_U102C103:G150G151_BB 7 4.192 -8.344 25.201 -5.164 0.039 3.421 35.612 B B 103 104 2.384 B B 150 149 3.440 1.456 0.420 -1.011 BB_C103U104:G149G150_BB 8 3.328 -5.450 35.432 -1.875 -0.178 2.715 28.293 B B 104 105 28.950 B B 149 148 3.448 13.527 0.395 -0.724 BB_U104C105:G148G149_BB 9 4.466 -9.558 24.508 -4.659 0.242 3.140 29.972 B B 105 106 18.422 B B 148 147 3.520 9.374 0.232 -0.697 BB_C105C106:G147G148_BB 10 0.276 -0.542 28.499 -3.369 -0.389 3.097 33.643 B B 112 113 25.448 B B 144 143 3.836 14.279 0.288 -0.897 BB_G112U113:A143U144_BB 11 -1.894 3.375 30.484 -4.151 -0.843 3.442 29.151 B B 113 114 8.053 B B 143 142 3.671 4.041 -0.465 -1.394 BB_U113G114:C142A143_BB 12 0.361 -0.720 28.873 -3.734 1.010 2.699 30.924 B B 114 115 15.396 B B 142 141 3.041 8.117 -0.123 -0.946 BB_G114A115:U141C142_BB 13 -0.707 1.341 29.856 -3.179 0.108 1.818 33.548 B B 115 116 46.522 B B 141 140 3.587 24.015 0.204 -0.859 BB_A115U116:U140U141_BB 14 -5.934 11.495 22.840 -5.411 -1.322 3.801 51.599 B B 116 117 -3.732 B B 140 139 3.817 -3.239 0.185 0.046 BB_U116U117:U139U140_BB 15 6.835 -7.877 51.079 0.310 0.331 1.937 26.274 B B 117 118 42.436 B B 139 138 3.033 17.643 -1.050 -0.517 BB_U117G118:C138U139_BB 16 -0.404 0.971 19.543 -5.300 2.215 2.378 36.717 B B 118 119 31.223 B B 138 137 3.299 18.695 0.922 -1.180 BB_G118A119:U137C138_BB 17 6.267 -10.466 31.128 -4.289 -0.654 2.643 32.322 B B 119 120 19.347 B B 137 136 3.029 10.579 -0.048 -0.699 BB_A119C120:G136U137_BB 18 1.374 -2.512 30.556 -2.928 0.303 2.883 43.254 B B 120 121 36.494 B B 136 135 4.192 25.102 1.003 -1.207 BB_C120U121:G135G136_BB 19 9.395 -13.658 34.265 -4.639 -0.237 3.349 44.306 B B 121 123 21.798 B B 135 134 3.590 16.097 -2.848 -0.182 BB_U121C123:G134G135_BB 20 -0.741 1.003 41.410 -1.890 3.700 2.762 36.226 B B 123 124 27.255 B B 134 133 3.662 16.367 -0.106 -1.202 BB_C123C124:G133G134_BB 21 -1.234 2.055 32.406 -4.327 -0.009 2.522 36.095 B B 124 125 25.000 B B 133 132 3.231 14.989 0.521 -1.167 BB_C124C125:G132G133_BB 22 5.402 -9.010 32.494 -3.855 -0.130 2.077 35.930 B B 125 126 37.024 B B 132 131 3.586 21.401 -0.635 -1.392 BB_C125G126:C131G132_BB 23 1.316 -2.277 29.002 -5.209 1.210 3.611 97.324 B B 126 127 8.345 B B 131 130 3.629 12.512 -2.279 0.071 BB_G126U127:G130C131_BB 24 0.435 -0.290 96.717 -0.186 1.526 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_site repository Initial release Database references Database references Data collection Database references Derived calculations 1 0 2014-09-17 1 1 2014-10-08 1 2 2014-12-24 1 3 2024-05-01 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BMRB Y RCSB 2014-06-27 REL REL REL ZN ZINC ION in vitro transcription 11786 Murine leukemia virus sample structures with acceptable covalent geometry 1000 10 2D 1H-1H NOESY 2D 1H-13C HSQC 2D 1H-13C HSQC 2D 1H-13C HSQC 2D 1H-13C HSQC 2D 1H-1H NOESY 2D 1H-1H NOESY 2D 1H-1H NOESY 2D 1H-1H NOESY 3D 1H-13C NOESY 0.5 mM 15N,13C-Alab 0.5 mM 15N.13C-Glab 0.5 mM 15N.13C-Ulab 0.5 mM 15N.13C-Clab 0.5 mM 1 mM 10mM Tris, 10mM Nacl 7.0 ambient 311 K 10mM Tris, 10mM NaCl 7.0 ambient 288 K distance geometry 1 fewest violations 0.5 mM 15N,13C-Alab U5-PBS-NC, 0.5 mM 15N.13C-Glab U5-PBS-NC, 0.5 mM 15N.13C-Ulab U5-PBS-NC, 0.5 mM 15N.13C-Clab U5-PBS-NC, 90% H2O/10% D2O 90% H2O/10% D2O 0.5 mM U5-PBS-M2-NC, 100% D2O 100% D2O 1 mM UAUCG-linker, 100% D2O 100% D2O Guntert, Mumenthaler and Wuthrich refinement CYANA Guntert, Mumenthaler and Wuthrich data analysis CYANA Guntert, Mumenthaler and Wuthrich processing CYANA Johnson, One Moon Scientific refinement CYANA Johnson, One Moon Scientific data analysis CYANA Johnson, One Moon Scientific processing CYANA Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax refinement CYANA Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax data analysis CYANA Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing CYANA 700 Bruker DMX Bruker DMX ZN 57 3 ZN ZN 101 A ALA 1 n 1 ALA 1 A THR 2 n 2 THR 2 A VAL 3 n 3 VAL 3 A VAL 4 n 4 VAL 4 A SER 5 n 5 SER 5 A GLY 6 n 6 GLY 6 A GLN 7 n 7 GLN 7 A LYS 8 n 8 LYS 8 A GLN 9 n 9 GLN 9 A ASP 10 n 10 ASP 10 A ARG 11 n 11 ARG 11 A GLN 12 n 12 GLN 12 A GLY 13 n 13 GLY 13 A GLY 14 n 14 GLY 14 A GLU 15 n 15 GLU 15 A ARG 16 n 16 ARG 16 A ARG 17 n 17 ARG 17 A ARG 18 n 18 ARG 18 A SER 19 n 19 SER 19 A GLN 20 n 20 GLN 20 A LEU 21 n 21 LEU 21 A ASP 22 n 22 ASP 22 A ARG 23 n 23 ARG 23 A ASP 24 n 24 ASP 24 A GLN 25 n 25 GLN 25 A CYS 26 n 26 CYS 26 A ALA 27 n 27 ALA 27 A TYR 28 n 28 TYR 28 A CYS 29 n 29 CYS 29 A LYS 30 n 30 LYS 30 A GLU 31 n 31 GLU 31 A LYS 32 n 32 LYS 32 A GLY 33 n 33 GLY 33 A HIS 34 n 34 HIS 34 A TRP 35 n 35 TRP 35 A ALA 36 n 36 ALA 36 A LYS 37 n 37 LYS 37 A ASP 38 n 38 ASP 38 A CYS 39 n 39 CYS 39 A PRO 40 n 40 PRO 40 A LYS 41 n 41 LYS 41 A LYS 42 n 42 LYS 42 A PRO 43 n 43 PRO 43 A ARG 44 n 44 ARG 44 A GLY 45 n 45 GLY 45 A PRO 46 n 46 PRO 46 A ARG 47 n 47 ARG 47 A GLY 48 n 48 GLY 48 A PRO 49 n 49 PRO 49 A ARG 50 n 50 ARG 50 A PRO 51 n 51 PRO 51 A GLN 52 n 52 GLN 52 A THR 53 n 53 THR 53 A SER 54 n 54 SER 54 A LEU 55 n 55 LEU 55 A LEU 56 n 56 LEU 56 A G 93 n 1 G 93 B G 94 n 2 G 94 B G 95 n 3 G 95 B C 96 n 4 C 96 B G 97 n 5 G 97 B A 98 n 6 A 98 B G 99 n 7 G 99 B G 100 n 8 G 100 B G 101 n 9 G 101 B U 102 n 10 U 102 B C 103 n 11 C 103 B U 104 n 12 U 104 B C 105 n 13 C 105 B C 106 n 14 C 106 B U 107 n 15 U 107 B C 108 n 16 C 108 B U 109 n 17 U 109 B G 110 n 18 G 110 B A 111 n 19 A 111 B G 112 n 20 G 112 B U 113 n 21 U 113 B G 114 n 22 G 114 B A 115 n 23 A 115 B U 116 n 24 U 116 B U 117 n 25 U 117 B G 118 n 26 G 118 B A 119 n 27 A 119 B C 120 n 28 C 120 B U 121 n 29 U 121 B A 122 n 30 A 122 B C 123 n 31 C 123 B C 124 n 32 C 124 B C 125 n 33 C 125 B G 126 n 34 G 126 B U 127 n 35 U 127 B C 128 n 36 C 128 B A 129 n 37 A 129 B G 130 n 38 G 130 B C 131 n 39 C 131 B G 132 n 40 G 132 B G 133 n 41 G 133 B G 134 n 42 G 134 B G 135 n 43 G 135 B G 136 n 44 G 136 B U 137 n 45 U 137 B C 138 n 46 C 138 B U 139 n 47 U 139 B U 140 n 48 U 140 B U 141 n 49 U 141 B C 142 n 50 C 142 B A 143 n 51 A 143 B U 144 n 52 U 144 B U 145 n 53 U 145 B U 146 n 54 U 146 B G 147 n 55 G 147 B G 148 n 56 G 148 B G 149 n 57 G 149 B G 150 n 58 G 150 B G 151 n 59 G 151 B C 152 n 60 C 152 B U 153 n 61 U 153 B C 154 n 62 C 154 B G 155 n 63 G 155 B U 156 n 64 U 156 B G 157 n 65 G 157 B C 158 n 66 C 158 B C 159 n 67 C 159 B C 160 n 68 C 160 B author_and_software_defined_assembly PISA 2 dimeric 1409 -4.7 18862 A CYS 26 A SG CYS 26 1_555 A ZN 101 C ZN ZN 1_555 A CYS 29 A SG CYS 29 1_555 96.6 A CYS 26 A SG CYS 26 1_555 A ZN 101 C ZN ZN 1_555 A HIS 34 A NE2 HIS 34 1_555 99.4 A CYS 29 A SG CYS 29 1_555 A ZN 101 C ZN ZN 1_555 A HIS 34 A NE2 HIS 34 1_555 101.7 A CYS 26 A SG CYS 26 1_555 A ZN 101 C ZN ZN 1_555 A CYS 39 A SG CYS 39 1_555 113.2 A CYS 29 A SG CYS 29 1_555 A ZN 101 C ZN ZN 1_555 A CYS 39 A SG CYS 39 1_555 115.9 A HIS 34 A NE2 HIS 34 1_555 A ZN 101 C ZN ZN 1_555 A CYS 39 A SG CYS 39 1_555 125.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 5 A A GLY PRO 45 46 -30.83 1 B G 95 0.054 SIDE CHAIN 1 B G 118 0.105 SIDE CHAIN 1 B C 124 0.061 SIDE CHAIN 1 B A 129 0.057 SIDE CHAIN 1 B G 130 0.068 SIDE CHAIN 1 B U 144 0.062 SIDE CHAIN 1 B G 157 0.089 SIDE CHAIN 2 B C 123 0.061 SIDE CHAIN 2 B G 135 0.080 SIDE CHAIN 2 B U 141 0.064 SIDE CHAIN 2 B G 151 0.060 SIDE CHAIN 2 B C 154 0.058 SIDE CHAIN 2 B U 156 0.078 SIDE CHAIN 2 B G 157 0.097 SIDE CHAIN 3 B G 97 0.057 SIDE CHAIN 3 B G 118 0.094 SIDE CHAIN 3 B U 144 0.072 SIDE CHAIN 3 B U 146 0.074 SIDE CHAIN 3 B G 147 0.070 SIDE CHAIN 3 B G 157 0.083 SIDE CHAIN 3 B C 158 0.065 SIDE CHAIN 3 B C 160 0.077 SIDE CHAIN 4 B A 111 0.068 SIDE CHAIN 4 B C 123 0.069 SIDE CHAIN 4 B G 135 0.070 SIDE CHAIN 4 B U 145 0.065 SIDE CHAIN 4 B U 146 0.071 SIDE CHAIN 4 B G 155 0.062 SIDE CHAIN 4 B G 157 0.073 SIDE CHAIN 5 A ARG 18 0.080 SIDE CHAIN 5 B C 106 0.065 SIDE CHAIN 5 B G 118 0.089 SIDE CHAIN 5 B C 123 0.065 SIDE CHAIN 5 B A 129 0.061 SIDE CHAIN 5 B G 135 0.074 SIDE CHAIN 5 B C 154 0.084 SIDE CHAIN 6 B U 109 0.069 SIDE CHAIN 6 B G 118 0.105 SIDE CHAIN 6 B U 127 0.068 SIDE CHAIN 6 B G 157 0.069 SIDE CHAIN 7 B G 118 0.100 SIDE CHAIN 7 B U 127 0.070 SIDE CHAIN 7 B U 146 0.090 SIDE CHAIN 7 B C 154 0.057 SIDE CHAIN 7 B U 156 0.112 SIDE CHAIN 8 B G 110 0.079 SIDE CHAIN 8 B A 111 0.062 SIDE CHAIN 8 B G 118 0.096 SIDE CHAIN 8 B U 146 0.127 SIDE CHAIN 8 B G 151 0.068 SIDE CHAIN 8 B C 152 0.060 SIDE CHAIN 8 B U 156 0.098 SIDE CHAIN 9 B C 106 0.086 SIDE CHAIN 9 B G 110 0.068 SIDE CHAIN 9 B G 118 0.095 SIDE CHAIN 9 B U 141 0.065 SIDE CHAIN 9 B U 145 0.070 SIDE CHAIN 9 B G 151 0.064 SIDE CHAIN 9 B C 154 0.065 SIDE CHAIN 9 B U 156 0.079 SIDE CHAIN 9 B G 157 0.098 SIDE CHAIN 10 B G 135 0.067 SIDE CHAIN 10 B U 146 0.083 SIDE CHAIN 10 B C 154 0.060 SIDE CHAIN 10 B U 156 0.104 SIDE CHAIN 10 B G 157 0.058 SIDE CHAIN 1 3.02 0.50 120.30 123.32 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 1 3.71 0.50 120.30 124.01 A A A NE CZ NH1 ARG ARG ARG 44 44 44 N 1 -4.79 0.70 121.90 117.11 B B B N3 C2 O2 C C C 96 96 96 N 1 -3.20 0.50 117.00 113.80 B B B C4 C5 C6 A A A 98 98 98 N 1 3.64 0.50 117.70 121.34 B B B C5 C6 N1 A A A 98 98 98 N 1 -5.19 0.60 118.60 113.41 B B B N1 C6 N6 A A A 98 98 98 N 1 3.70 0.60 118.90 122.60 B B B N1 C2 O2 C C C 103 103 103 N 1 -5.27 0.70 121.90 116.63 B B B N3 C2 O2 C C C 103 103 103 N 1 -5.01 0.70 121.90 116.89 B B B N3 C2 O2 C C C 105 105 105 N 1 -4.91 0.70 121.90 116.99 B B B N3 C2 O2 C C C 106 106 106 N 1 -4.77 0.70 121.90 117.13 B B B N3 C2 O2 C C C 108 108 108 N 1 -4.23 0.60 119.90 115.67 B B B N1 C6 O6 G G G 110 110 110 N 1 -3.04 0.50 117.00 113.96 B B B C4 C5 C6 A A A 111 111 111 N 1 3.46 0.50 117.70 121.16 B B B C5 C6 N1 A A A 111 111 111 N 1 -5.41 0.60 118.60 113.19 B B B N1 C6 N6 A A A 111 111 111 N 1 -3.10 0.50 117.00 113.90 B B B C4 C5 C6 A A A 115 115 115 N 1 3.11 0.50 117.70 120.81 B B B C5 C6 N1 A A A 115 115 115 N 1 -4.70 0.60 118.60 113.90 B B B N1 C6 N6 A A A 115 115 115 N 1 4.23 0.70 108.50 112.73 B B B O4' C1' N1 U U U 116 116 116 N 1 -4.59 0.60 118.60 114.01 B B B N1 C6 N6 A A A 119 119 119 N 1 -4.90 0.70 121.90 117.00 B B B N3 C2 O2 C C C 120 120 120 N 1 -5.40 0.60 118.60 113.20 B B B N1 C6 N6 A A A 122 122 122 N 1 -4.62 0.70 121.90 117.28 B B B N3 C2 O2 C C C 123 123 123 N 1 -4.69 0.70 121.90 117.21 B B B N3 C2 O2 C C C 124 124 124 N 1 -4.91 0.70 121.90 116.99 B B B N3 C2 O2 C C C 125 125 125 N 1 -4.80 0.70 121.90 117.10 B B B N3 C2 O2 C C C 128 128 128 N 1 3.23 0.50 117.70 120.93 B B B C5 C6 N1 A A A 129 129 129 N 1 -4.40 0.60 118.60 114.20 B B B N1 C6 N6 A A A 129 129 129 N 1 -4.60 0.70 121.90 117.30 B B B N3 C2 O2 C C C 131 131 131 N 1 -4.41 0.60 119.90 115.49 B B B N1 C6 O6 G G G 135 135 135 N 1 3.73 0.60 128.60 132.33 B B B C5 C6 O6 G G G 135 135 135 N 1 4.75 0.70 108.50 113.25 B B B O4' C1' N1 U U U 137 137 137 N 1 -4.47 0.70 121.90 117.43 B B B N3 C2 O2 C C C 138 138 138 N 1 4.56 0.70 108.50 113.06 B B B O4' C1' N1 U U U 139 139 139 N 1 -5.01 0.70 121.90 116.89 B B B N3 C2 O2 C C C 142 142 142 N 1 -3.14 0.50 117.00 113.86 B B B C4 C5 C6 A A A 143 143 143 N 1 3.56 0.50 117.70 121.26 B B B C5 C6 N1 A A A 143 143 143 N 1 -5.01 0.60 118.60 113.59 B B B N1 C6 N6 A A A 143 143 143 N 1 3.63 0.60 118.90 122.53 B B B N1 C2 O2 C C C 152 152 152 N 1 -5.13 0.70 121.90 116.77 B B B N3 C2 O2 C C C 152 152 152 N 1 3.64 0.60 118.90 122.54 B B B N1 C2 O2 C C C 154 154 154 N 1 -5.18 0.70 121.90 116.72 B B B N3 C2 O2 C C C 154 154 154 N 1 5.88 0.70 108.50 114.38 B B B O4' C1' N9 G G G 155 155 155 N 1 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 158 158 158 N 1 -4.77 0.70 121.90 117.13 B B B N3 C2 O2 C C C 159 159 159 N 1 -4.97 0.70 121.90 116.93 B B B N3 C2 O2 C C C 160 160 160 N 2 3.67 0.50 120.30 123.97 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 2 -4.84 0.70 121.90 117.06 B B B N3 C2 O2 C C C 96 96 96 N 2 -3.26 0.50 117.00 113.74 B B B C4 C5 C6 A A A 98 98 98 N 2 3.67 0.50 117.70 121.37 B B B C5 C6 N1 A A A 98 98 98 N 2 -5.81 0.60 118.60 112.79 B B B N1 C6 N6 A A A 98 98 98 N 2 4.24 0.70 108.50 112.74 B B B O4' C1' N1 C C C 103 103 103 N 2 -5.11 0.70 121.90 116.79 B B B N3 C2 O2 C C C 103 103 103 N 2 -4.94 0.70 121.90 116.96 B B B N3 C2 O2 C C C 105 105 105 N 2 -5.08 0.70 121.90 116.82 B B B N3 C2 O2 C C C 106 106 106 N 2 -5.28 0.70 121.90 116.62 B B B N3 C2 O2 C C C 108 108 108 N 2 -3.90 0.60 119.90 116.00 B B B N1 C6 O6 G G G 110 110 110 N 2 3.90 0.50 117.70 121.60 B B B C5 C6 N1 A A A 111 111 111 N 2 -5.46 0.60 118.60 113.14 B B B N1 C6 N6 A A A 111 111 111 N 2 3.22 0.50 117.70 120.92 B B B C5 C6 N1 A A A 115 115 115 N 2 -4.66 0.60 118.60 113.94 B B B N1 C6 N6 A A A 115 115 115 N 2 4.42 0.70 108.50 112.92 B B B O4' C1' N1 U U U 116 116 116 N 2 3.07 0.50 117.70 120.77 B B B C5 C6 N1 A A A 119 119 119 N 2 -4.69 0.60 118.60 113.91 B B B N1 C6 N6 A A A 119 119 119 N 2 -4.80 0.70 121.90 117.10 B B B N3 C2 O2 C C C 120 120 120 N 2 -3.12 0.50 117.00 113.88 B B B C4 C5 C6 A A A 122 122 122 N 2 3.29 0.50 117.70 120.99 B B B C5 C6 N1 A A A 122 122 122 N 2 -7.47 0.60 118.60 111.13 B B B N1 C6 N6 A A A 122 122 122 N 2 -4.89 0.70 121.90 117.01 B B B N3 C2 O2 C C C 123 123 123 N 2 -4.84 0.70 121.90 117.06 B B B N3 C2 O2 C C C 124 124 124 N 2 -4.77 0.70 121.90 117.13 B B B N3 C2 O2 C C C 125 125 125 N 2 -4.38 0.70 121.90 117.52 B B B N3 C2 O2 C C C 128 128 128 N 2 3.16 0.50 117.70 120.86 B B B C5 C6 N1 A A A 129 129 129 N 2 -3.87 0.60 118.60 114.73 B B B N1 C6 N6 A A A 129 129 129 N 2 -4.70 0.70 121.90 117.20 B B B N3 C2 O2 C C C 131 131 131 N 2 4.42 0.70 108.50 112.92 B B B O4' C1' N1 U U U 137 137 137 N 2 -4.54 0.70 121.90 117.36 B B B N3 C2 O2 C C C 138 138 138 N 2 4.31 0.70 108.50 112.81 B B B O4' C1' N1 U U U 139 139 139 N 2 -4.95 0.70 121.90 116.95 B B B N3 C2 O2 C C C 142 142 142 N 2 -3.28 0.50 117.00 113.72 B B B C4 C5 C6 A A A 143 143 143 N 2 3.51 0.50 117.70 121.21 B B B C5 C6 N1 A A A 143 143 143 N 2 -5.09 0.60 118.60 113.51 B B B N1 C6 N6 A A A 143 143 143 N 2 -4.39 0.70 122.20 117.81 B B B N3 C2 O2 U U U 146 146 146 N 2 -4.97 0.70 121.90 116.93 B B B N3 C2 O2 C C C 152 152 152 N 2 3.65 0.60 118.90 122.55 B B B N1 C2 O2 C C C 154 154 154 N 2 -5.18 0.70 121.90 116.72 B B B N3 C2 O2 C C C 154 154 154 N 2 4.22 0.70 108.50 112.72 B B B O4' C1' N9 G G G 155 155 155 N 2 -4.81 0.70 121.90 117.09 B B B N3 C2 O2 C C C 158 158 158 N 2 -4.98 0.70 121.90 116.92 B B B N3 C2 O2 C C C 159 159 159 N 2 -4.81 0.70 121.90 117.09 B B B N3 C2 O2 C C C 160 160 160 N 3 3.48 0.50 120.30 123.78 A A A NE CZ NH1 ARG ARG ARG 16 16 16 N 3 -4.85 0.70 121.90 117.05 B B B N3 C2 O2 C C C 96 96 96 N 3 -3.23 0.50 117.00 113.77 B B B C4 C5 C6 A A A 98 98 98 N 3 3.53 0.50 117.70 121.23 B B B C5 C6 N1 A A A 98 98 98 N 3 -5.10 0.60 118.60 113.50 B B B N1 C6 N6 A A A 98 98 98 N 3 -5.13 0.70 121.90 116.77 B B B N3 C2 O2 C C C 103 103 103 N 3 -5.07 0.70 121.90 116.83 B B B N3 C2 O2 C C C 105 105 105 N 3 -4.94 0.70 121.90 116.96 B B B N3 C2 O2 C C C 106 106 106 N 3 -5.08 0.70 121.90 116.82 B B B N3 C2 O2 C C C 108 108 108 N 3 -3.85 0.60 119.90 116.05 B B B N1 C6 O6 G G G 110 110 110 N 3 3.91 0.50 117.70 121.61 B B B C5 C6 N1 A A A 111 111 111 N 3 -5.52 0.60 118.60 113.08 B B B N1 C6 N6 A A A 111 111 111 N 3 -3.08 0.50 117.00 113.92 B B B C4 C5 C6 A A A 115 115 115 N 3 -4.91 0.60 118.60 113.69 B B B N1 C6 N6 A A A 115 115 115 N 3 3.04 0.50 117.70 120.74 B B B C5 C6 N1 A A A 119 119 119 N 3 -4.44 0.60 118.60 114.16 B B B N1 C6 N6 A A A 119 119 119 N 3 -4.72 0.70 121.90 117.18 B B B N3 C2 O2 C C C 120 120 120 N 3 -5.62 0.60 118.60 112.98 B B B N1 C6 N6 A A A 122 122 122 N 3 -4.67 0.70 121.90 117.23 B B B N3 C2 O2 C C C 123 123 123 N 3 -4.74 0.70 121.90 117.16 B B B N3 C2 O2 C C C 124 124 124 N 3 -4.91 0.70 121.90 116.99 B B B N3 C2 O2 C C C 125 125 125 N 3 -4.32 0.70 121.90 117.58 B B B N3 C2 O2 C C C 128 128 128 N 3 -3.14 0.50 117.00 113.86 B B B C4 C5 C6 A A A 129 129 129 N 3 3.57 0.50 117.70 121.27 B B B C5 C6 N1 A A A 129 129 129 N 3 -5.29 0.60 118.60 113.31 B B B N1 C6 N6 A A A 129 129 129 N 3 -4.72 0.70 121.90 117.18 B B B N3 C2 O2 C C C 131 131 131 N 3 -4.47 0.60 119.90 115.43 B B B N1 C6 O6 G G G 135 135 135 N 3 3.77 0.60 128.60 132.37 B B B C5 C6 O6 G G G 135 135 135 N 3 4.79 0.70 108.50 113.29 B B B O4' C1' N1 U U U 137 137 137 N 3 -4.51 0.70 121.90 117.39 B B B N3 C2 O2 C C C 138 138 138 N 3 4.87 0.70 108.50 113.37 B B B O4' C1' N1 U U U 139 139 139 N 3 -4.86 0.70 121.90 117.04 B B B N3 C2 O2 C C C 142 142 142 N 3 -3.12 0.50 117.00 113.88 B B B C4 C5 C6 A A A 143 143 143 N 3 3.52 0.50 117.70 121.22 B B B C5 C6 N1 A A A 143 143 143 N 3 -5.11 0.60 118.60 113.49 B B B N1 C6 N6 A A A 143 143 143 N 3 5.60 0.70 108.50 114.10 B B B O4' C1' N1 U U U 146 146 146 N 3 -4.53 0.70 122.20 117.67 B B B N3 C2 O2 U U U 146 146 146 N 3 -5.00 0.70 121.90 116.90 B B B N3 C2 O2 C C C 152 152 152 N 3 -4.94 0.70 121.90 116.96 B B B N3 C2 O2 C C C 154 154 154 N 3 5.30 0.70 108.50 113.80 B B B O4' C1' N9 G G G 155 155 155 N 3 -4.86 0.70 121.90 117.04 B B B N3 C2 O2 C C C 158 158 158 N 3 -4.92 0.70 121.90 116.98 B B B N3 C2 O2 C C C 159 159 159 N 3 -4.99 0.70 121.90 116.91 B B B N3 C2 O2 C C C 160 160 160 N 4 3.94 0.50 120.30 124.24 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 4 4.20 0.70 108.50 112.70 B B B O4' C1' N1 C C C 96 96 96 N 4 -4.90 0.70 121.90 117.00 B B B N3 C2 O2 C C C 96 96 96 N 4 -3.30 0.50 117.00 113.70 B B B C4 C5 C6 A A A 98 98 98 N 4 3.69 0.50 117.70 121.39 B B B C5 C6 N1 A A A 98 98 98 N 4 -5.80 0.60 118.60 112.80 B B B N1 C6 N6 A A A 98 98 98 N 4 3.64 0.60 118.90 122.54 B B B N1 C2 O2 C C C 103 103 103 N 4 -5.19 0.70 121.90 116.71 B B B N3 C2 O2 C C C 103 103 103 N 4 -5.15 0.70 121.90 116.75 B B B N3 C2 O2 C C C 105 105 105 N 4 4.51 0.70 108.50 113.01 B B B O4' C1' N1 C C C 106 106 106 N 4 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 106 106 106 N 4 -5.58 0.70 121.90 116.32 B B B N3 C2 O2 C C C 108 108 108 N 4 -3.90 0.60 119.90 116.00 B B B N1 C6 O6 G G G 110 110 110 N 4 3.57 0.50 117.70 121.27 B B B C5 C6 N1 A A A 111 111 111 N 4 -4.30 0.60 118.60 114.30 B B B N1 C6 N6 A A A 111 111 111 N 4 3.02 0.50 117.70 120.72 B B B C5 C6 N1 A A A 115 115 115 N 4 -4.70 0.60 118.60 113.90 B B B N1 C6 N6 A A A 115 115 115 N 4 4.29 0.70 108.50 112.79 B B B O4' C1' N1 U U U 116 116 116 N 4 -4.73 0.60 118.60 113.87 B B B N1 C6 N6 A A A 119 119 119 N 4 4.39 0.70 108.50 112.89 B B B O4' C1' N1 C C C 120 120 120 N 4 -4.72 0.70 121.90 117.18 B B B N3 C2 O2 C C C 120 120 120 N 4 -3.19 0.50 117.00 113.81 B B B C4 C5 C6 A A A 122 122 122 N 4 3.22 0.50 117.70 120.92 B B B C5 C6 N1 A A A 122 122 122 N 4 -7.75 0.60 118.60 110.85 B B B N1 C6 N6 A A A 122 122 122 N 4 -4.88 0.70 121.90 117.02 B B B N3 C2 O2 C C C 123 123 123 N 4 -4.74 0.70 121.90 117.16 B B B N3 C2 O2 C C C 124 124 124 N 4 -4.79 0.70 121.90 117.11 B B B N3 C2 O2 C C C 125 125 125 N 4 -4.29 0.70 121.90 117.61 B B B N3 C2 O2 C C C 128 128 128 N 4 -3.08 0.50 117.00 113.92 B B B C4 C5 C6 A A A 129 129 129 N 4 3.56 0.50 117.70 121.26 B B B C5 C6 N1 A A A 129 129 129 N 4 -5.29 0.60 118.60 113.31 B B B N1 C6 N6 A A A 129 129 129 N 4 4.56 0.70 108.50 113.06 B B B O4' C1' N9 G G G 130 130 130 N 4 -4.72 0.70 121.90 117.18 B B B N3 C2 O2 C C C 131 131 131 N 4 4.41 0.70 108.50 112.91 B B B O4' C1' N1 U U U 137 137 137 N 4 -4.74 0.70 121.90 117.16 B B B N3 C2 O2 C C C 138 138 138 N 4 4.51 0.70 108.50 113.01 B B B O4' C1' N1 U U U 139 139 139 N 4 -5.10 0.70 121.90 116.80 B B B N3 C2 O2 C C C 142 142 142 N 4 3.73 0.50 117.70 121.43 B B B C5 C6 N1 A A A 143 143 143 N 4 -4.63 0.60 118.60 113.97 B B B N1 C6 N6 A A A 143 143 143 N 4 7.29 0.70 108.50 115.79 B B B O4' C1' N1 U U U 146 146 146 N 4 -4.89 0.70 122.20 117.31 B B B N3 C2 O2 U U U 146 146 146 N 4 -5.05 0.70 121.90 116.85 B B B N3 C2 O2 C C C 152 152 152 N 4 -5.03 0.70 121.90 116.87 B B B N3 C2 O2 C C C 154 154 154 N 4 6.66 0.70 108.50 115.16 B B B O4' C1' N9 G G G 155 155 155 N 4 -4.65 0.70 121.90 117.25 B B B N3 C2 O2 C C C 158 158 158 N 4 -4.97 0.70 121.90 116.93 B B B N3 C2 O2 C C C 159 159 159 N 4 -4.92 0.70 121.90 116.98 B B B N3 C2 O2 C C C 160 160 160 N 5 3.15 0.50 120.30 123.45 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 5 3.88 0.50 120.30 124.18 A A A NE CZ NH1 ARG ARG ARG 18 18 18 N 5 3.50 0.50 120.30 123.80 A A A NE CZ NH1 ARG ARG ARG 23 23 23 N 5 -4.88 0.70 121.90 117.02 B B B N3 C2 O2 C C C 96 96 96 N 5 -3.16 0.50 117.00 113.84 B B B C4 C5 C6 A A A 98 98 98 N 5 3.67 0.50 117.70 121.37 B B B C5 C6 N1 A A A 98 98 98 N 5 -5.49 0.60 118.60 113.11 B B B N1 C6 N6 A A A 98 98 98 N 5 -5.01 0.70 121.90 116.89 B B B N3 C2 O2 C C C 103 103 103 N 5 -5.06 0.70 121.90 116.84 B B B N3 C2 O2 C C C 105 105 105 N 5 4.47 0.70 108.50 112.97 B B B O4' C1' N1 C C C 106 106 106 N 5 -4.95 0.70 121.90 116.95 B B B N3 C2 O2 C C C 106 106 106 N 5 -5.17 0.70 121.90 116.73 B B B N3 C2 O2 C C C 108 108 108 N 5 -3.98 0.60 119.90 115.92 B B B N1 C6 O6 G G G 110 110 110 N 5 3.83 0.50 117.70 121.53 B B B C5 C6 N1 A A A 111 111 111 N 5 -5.63 0.60 118.60 112.97 B B B N1 C6 N6 A A A 111 111 111 N 5 -3.01 0.50 117.00 113.99 B B B C4 C5 C6 A A A 115 115 115 N 5 3.12 0.50 117.70 120.82 B B B C5 C6 N1 A A A 115 115 115 N 5 -4.83 0.60 118.60 113.77 B B B N1 C6 N6 A A A 115 115 115 N 5 4.36 0.70 108.50 112.86 B B B O4' C1' N1 U U U 116 116 116 N 5 3.12 0.50 117.70 120.82 B B B C5 C6 N1 A A A 119 119 119 N 5 -4.56 0.60 118.60 114.04 B B B N1 C6 N6 A A A 119 119 119 N 5 -4.78 0.70 121.90 117.12 B B B N3 C2 O2 C C C 120 120 120 N 5 -3.05 0.50 117.00 113.95 B B B C4 C5 C6 A A A 122 122 122 N 5 3.21 0.50 117.70 120.91 B B B C5 C6 N1 A A A 122 122 122 N 5 -7.46 0.60 118.60 111.14 B B B N1 C6 N6 A A A 122 122 122 N 5 -4.81 0.70 121.90 117.09 B B B N3 C2 O2 C C C 123 123 123 N 5 -4.71 0.70 121.90 117.19 B B B N3 C2 O2 C C C 124 124 124 N 5 -4.84 0.70 121.90 117.06 B B B N3 C2 O2 C C C 125 125 125 N 5 -4.36 0.70 121.90 117.54 B B B N3 C2 O2 C C C 128 128 128 N 5 3.48 0.50 117.70 121.18 B B B C5 C6 N1 A A A 129 129 129 N 5 -5.23 0.60 118.60 113.37 B B B N1 C6 N6 A A A 129 129 129 N 5 -4.69 0.70 121.90 117.21 B B B N3 C2 O2 C C C 131 131 131 N 5 4.60 0.70 108.50 113.10 B B B O4' C1' N1 U U U 137 137 137 N 5 -4.58 0.70 121.90 117.32 B B B N3 C2 O2 C C C 138 138 138 N 5 4.75 0.70 108.50 113.25 B B B O4' C1' N1 U U U 139 139 139 N 5 -5.06 0.70 121.90 116.84 B B B N3 C2 O2 C C C 142 142 142 N 5 -3.11 0.50 117.00 113.89 B B B C4 C5 C6 A A A 143 143 143 N 5 3.59 0.50 117.70 121.29 B B B C5 C6 N1 A A A 143 143 143 N 5 -4.95 0.60 118.60 113.65 B B B N1 C6 N6 A A A 143 143 143 N 5 -4.97 0.70 121.90 116.93 B B B N3 C2 O2 C C C 152 152 152 N 5 -4.91 0.70 121.90 116.99 B B B N3 C2 O2 C C C 154 154 154 N 5 -4.65 0.70 121.90 117.25 B B B N3 C2 O2 C C C 158 158 158 N 5 -5.06 0.70 121.90 116.84 B B B N3 C2 O2 C C C 159 159 159 N 5 -4.98 0.70 121.90 116.92 B B B N3 C2 O2 C C C 160 160 160 N 6 3.36 0.50 120.30 123.66 A A A NE CZ NH1 ARG ARG ARG 11 11 11 N 6 3.55 0.50 120.30 123.85 A A A NE CZ NH1 ARG ARG ARG 16 16 16 N 6 3.60 0.50 120.30 123.90 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 6 3.81 0.50 120.30 124.11 A A A NE CZ NH1 ARG ARG ARG 23 23 23 N 6 -4.77 0.70 121.90 117.13 B B B N3 C2 O2 C C C 96 96 96 N 6 -3.27 0.50 117.00 113.73 B B B C4 C5 C6 A A A 98 98 98 N 6 3.65 0.50 117.70 121.35 B B B C5 C6 N1 A A A 98 98 98 N 6 -6.24 0.60 118.60 112.36 B B B N1 C6 N6 A A A 98 98 98 N 6 3.77 0.60 118.90 122.67 B B B N1 C2 O2 C C C 103 103 103 N 6 -5.25 0.70 121.90 116.65 B B B N3 C2 O2 C C C 103 103 103 N 6 -5.13 0.70 121.90 116.77 B B B N3 C2 O2 C C C 105 105 105 N 6 -4.86 0.70 121.90 117.04 B B B N3 C2 O2 C C C 106 106 106 N 6 -5.30 0.70 121.90 116.60 B B B N3 C2 O2 C C C 108 108 108 N 6 -3.87 0.60 119.90 116.03 B B B N1 C6 O6 G G G 110 110 110 N 6 -3.17 0.50 117.00 113.83 B B B C4 C5 C6 A A A 111 111 111 N 6 3.79 0.50 117.70 121.49 B B B C5 C6 N1 A A A 111 111 111 N 6 -5.41 0.60 118.60 113.19 B B B N1 C6 N6 A A A 111 111 111 N 6 -3.06 0.50 117.00 113.94 B B B C4 C5 C6 A A A 115 115 115 N 6 3.14 0.50 117.70 120.84 B B B C5 C6 N1 A A A 115 115 115 N 6 -4.80 0.60 118.60 113.80 B B B N1 C6 N6 A A A 115 115 115 N 6 -4.56 0.60 118.60 114.04 B B B N1 C6 N6 A A A 119 119 119 N 6 -4.82 0.70 121.90 117.08 B B B N3 C2 O2 C C C 120 120 120 N 6 -6.18 0.60 118.60 112.42 B B B N1 C6 N6 A A A 122 122 122 N 6 -4.61 0.70 121.90 117.29 B B B N3 C2 O2 C C C 123 123 123 N 6 -4.68 0.70 121.90 117.22 B B B N3 C2 O2 C C C 124 124 124 N 6 -4.81 0.70 121.90 117.09 B B B N3 C2 O2 C C C 125 125 125 N 6 -4.36 0.70 121.90 117.54 B B B N3 C2 O2 C C C 128 128 128 N 6 -3.01 0.50 117.00 113.99 B B B C4 C5 C6 A A A 129 129 129 N 6 3.71 0.50 117.70 121.41 B B B C5 C6 N1 A A A 129 129 129 N 6 -5.01 0.60 118.60 113.59 B B B N1 C6 N6 A A A 129 129 129 N 6 3.30 0.50 113.10 116.40 B B B N7 C8 N9 G G G 130 130 130 N 6 -4.61 0.70 121.90 117.29 B B B N3 C2 O2 C C C 131 131 131 N 6 -4.01 0.60 119.90 115.89 B B B N1 C6 O6 G G G 135 135 135 N 6 4.81 0.70 108.50 113.31 B B B O4' C1' N1 U U U 137 137 137 N 6 -4.54 0.70 121.90 117.36 B B B N3 C2 O2 C C C 138 138 138 N 6 4.63 0.70 108.50 113.13 B B B O4' C1' N1 U U U 139 139 139 N 6 -4.90 0.70 121.90 117.00 B B B N3 C2 O2 C C C 142 142 142 N 6 -3.14 0.50 117.00 113.86 B B B C4 C5 C6 A A A 143 143 143 N 6 3.48 0.50 117.70 121.18 B B B C5 C6 N1 A A A 143 143 143 N 6 -4.74 0.60 118.60 113.86 B B B N1 C6 N6 A A A 143 143 143 N 6 -5.03 0.70 121.90 116.87 B B B N3 C2 O2 C C C 152 152 152 N 6 -5.16 0.70 121.90 116.74 B B B N3 C2 O2 C C C 154 154 154 N 6 -4.79 0.70 121.90 117.11 B B B N3 C2 O2 C C C 158 158 158 N 6 -4.90 0.70 121.90 117.00 B B B N3 C2 O2 C C C 159 159 159 N 6 -4.91 0.70 121.90 116.99 B B B N3 C2 O2 C C C 160 160 160 N 7 3.93 0.50 120.30 124.23 A A A NE CZ NH1 ARG ARG ARG 11 11 11 N 7 3.74 0.50 120.30 124.04 A A A NE CZ NH1 ARG ARG ARG 16 16 16 N 7 3.01 0.50 120.30 123.31 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 7 -4.84 0.70 121.90 117.06 B B B N3 C2 O2 C C C 96 96 96 N 7 -3.26 0.50 117.00 113.74 B B B C4 C5 C6 A A A 98 98 98 N 7 3.81 0.50 117.70 121.51 B B B C5 C6 N1 A A A 98 98 98 N 7 -6.44 0.60 118.60 112.16 B B B N1 C6 N6 A A A 98 98 98 N 7 4.30 0.70 108.50 112.80 B B B O4' C1' N1 C C C 103 103 103 N 7 -5.10 0.70 121.90 116.80 B B B N3 C2 O2 C C C 103 103 103 N 7 -5.06 0.70 121.90 116.84 B B B N3 C2 O2 C C C 105 105 105 N 7 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 106 106 106 N 7 -5.40 0.70 121.90 116.50 B B B N3 C2 O2 C C C 108 108 108 N 7 -4.17 0.60 119.90 115.73 B B B N1 C6 O6 G G G 110 110 110 N 7 -3.02 0.50 117.00 113.98 B B B C4 C5 C6 A A A 111 111 111 N 7 3.79 0.50 117.70 121.49 B B B C5 C6 N1 A A A 111 111 111 N 7 -5.51 0.60 118.60 113.09 B B B N1 C6 N6 A A A 111 111 111 N 7 -3.09 0.50 117.00 113.91 B B B C4 C5 C6 A A A 115 115 115 N 7 3.09 0.50 117.70 120.79 B B B C5 C6 N1 A A A 115 115 115 N 7 -4.78 0.60 118.60 113.82 B B B N1 C6 N6 A A A 115 115 115 N 7 4.22 0.70 108.50 112.72 B B B O4' C1' N1 U U U 116 116 116 N 7 -4.70 0.60 118.60 113.90 B B B N1 C6 N6 A A A 119 119 119 N 7 -4.91 0.70 121.90 116.99 B B B N3 C2 O2 C C C 120 120 120 N 7 -5.59 0.60 118.60 113.01 B B B N1 C6 N6 A A A 122 122 122 N 7 -4.67 0.70 121.90 117.23 B B B N3 C2 O2 C C C 123 123 123 N 7 -4.73 0.70 121.90 117.17 B B B N3 C2 O2 C C C 124 124 124 N 7 -4.98 0.70 121.90 116.92 B B B N3 C2 O2 C C C 125 125 125 N 7 -4.31 0.70 121.90 117.59 B B B N3 C2 O2 C C C 128 128 128 N 7 -3.03 0.50 117.00 113.97 B B B C4 C5 C6 A A A 129 129 129 N 7 3.84 0.50 117.70 121.54 B B B C5 C6 N1 A A A 129 129 129 N 7 -5.00 0.60 118.60 113.60 B B B N1 C6 N6 A A A 129 129 129 N 7 3.16 0.50 113.10 116.26 B B B N7 C8 N9 G G G 130 130 130 N 7 -4.75 0.70 121.90 117.15 B B B N3 C2 O2 C C C 131 131 131 N 7 -4.54 0.60 119.90 115.36 B B B N1 C6 O6 G G G 135 135 135 N 7 3.84 0.60 128.60 132.44 B B B C5 C6 O6 G G G 135 135 135 N 7 4.72 0.70 108.50 113.22 B B B O4' C1' N1 U U U 137 137 137 N 7 -4.43 0.70 121.90 117.47 B B B N3 C2 O2 C C C 138 138 138 N 7 4.77 0.70 108.50 113.27 B B B O4' C1' N1 U U U 139 139 139 N 7 -5.03 0.70 121.90 116.87 B B B N3 C2 O2 C C C 142 142 142 N 7 -3.10 0.50 117.00 113.90 B B B C4 C5 C6 A A A 143 143 143 N 7 3.45 0.50 117.70 121.15 B B B C5 C6 N1 A A A 143 143 143 N 7 -4.97 0.60 118.60 113.63 B B B N1 C6 N6 A A A 143 143 143 N 7 6.18 0.70 108.50 114.68 B B B O4' C1' N1 U U U 146 146 146 N 7 -4.55 0.70 122.20 117.65 B B B N3 C2 O2 U U U 146 146 146 N 7 -4.94 0.70 121.90 116.96 B B B N3 C2 O2 C C C 152 152 152 N 7 -4.97 0.70 121.90 116.93 B B B N3 C2 O2 C C C 154 154 154 N 7 4.70 0.70 108.50 113.20 B B B O4' C1' N9 G G G 155 155 155 N 7 -4.71 0.70 121.90 117.19 B B B N3 C2 O2 C C C 158 158 158 N 7 -4.93 0.70 121.90 116.97 B B B N3 C2 O2 C C C 159 159 159 N 7 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 160 160 160 N 8 3.87 0.50 120.30 124.17 A A A NE CZ NH1 ARG ARG ARG 11 11 11 N 8 3.84 0.50 120.30 124.14 A A A NE CZ NH1 ARG ARG ARG 16 16 16 N 8 4.12 0.50 120.30 124.42 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 8 3.50 0.50 120.30 123.80 A A A NE CZ NH1 ARG ARG ARG 18 18 18 N 8 -4.76 0.70 121.90 117.14 B B B N3 C2 O2 C C C 96 96 96 N 8 -3.32 0.50 117.00 113.68 B B B C4 C5 C6 A A A 98 98 98 N 8 3.84 0.50 117.70 121.54 B B B C5 C6 N1 A A A 98 98 98 N 8 -6.46 0.60 118.60 112.14 B B B N1 C6 N6 A A A 98 98 98 N 8 4.36 0.70 108.50 112.86 B B B O4' C1' N1 C C C 103 103 103 N 8 3.76 0.60 118.90 122.66 B B B N1 C2 O2 C C C 103 103 103 N 8 -5.23 0.70 121.90 116.67 B B B N3 C2 O2 C C C 103 103 103 N 8 -5.10 0.70 121.90 116.80 B B B N3 C2 O2 C C C 105 105 105 N 8 -5.04 0.70 121.90 116.86 B B B N3 C2 O2 C C C 106 106 106 N 8 -5.53 0.70 121.90 116.37 B B B N3 C2 O2 C C C 108 108 108 N 8 -4.30 0.70 122.20 117.90 B B B N3 C2 O2 U U U 109 109 109 N 8 -3.89 0.60 119.90 116.01 B B B N1 C6 O6 G G G 110 110 110 N 8 3.41 0.50 117.70 121.11 B B B C5 C6 N1 A A A 111 111 111 N 8 -4.42 0.60 118.60 114.18 B B B N1 C6 N6 A A A 111 111 111 N 8 -3.01 0.50 117.00 113.99 B B B C4 C5 C6 A A A 115 115 115 N 8 3.02 0.50 117.70 120.72 B B B C5 C6 N1 A A A 115 115 115 N 8 -4.55 0.60 118.60 114.05 B B B N1 C6 N6 A A A 115 115 115 N 8 3.13 0.50 117.70 120.83 B B B C5 C6 N1 A A A 119 119 119 N 8 -4.53 0.60 118.60 114.07 B B B N1 C6 N6 A A A 119 119 119 N 8 -4.89 0.70 121.90 117.01 B B B N3 C2 O2 C C C 120 120 120 N 8 -5.85 0.60 118.60 112.75 B B B N1 C6 N6 A A A 122 122 122 N 8 -4.69 0.70 121.90 117.21 B B B N3 C2 O2 C C C 123 123 123 N 8 -4.79 0.70 121.90 117.11 B B B N3 C2 O2 C C C 124 124 124 N 8 -4.85 0.70 121.90 117.05 B B B N3 C2 O2 C C C 125 125 125 N 8 -4.40 0.70 121.90 117.50 B B B N3 C2 O2 C C C 128 128 128 N 8 3.33 0.50 117.70 121.03 B B B C5 C6 N1 A A A 129 129 129 N 8 -5.19 0.60 118.60 113.41 B B B N1 C6 N6 A A A 129 129 129 N 8 -4.62 0.70 121.90 117.28 B B B N3 C2 O2 C C C 131 131 131 N 8 -4.03 0.60 119.90 115.87 B B B N1 C6 O6 G G G 135 135 135 N 8 4.84 0.70 108.50 113.34 B B B O4' C1' N1 U U U 137 137 137 N 8 -4.53 0.70 121.90 117.37 B B B N3 C2 O2 C C C 138 138 138 N 8 4.72 0.70 108.50 113.22 B B B O4' C1' N1 U U U 139 139 139 N 8 -5.21 0.70 121.90 116.69 B B B N3 C2 O2 C C C 142 142 142 N 8 -3.16 0.50 117.00 113.84 B B B C4 C5 C6 A A A 143 143 143 N 8 3.59 0.50 117.70 121.29 B B B C5 C6 N1 A A A 143 143 143 N 8 -4.78 0.60 118.60 113.82 B B B N1 C6 N6 A A A 143 143 143 N 8 5.39 0.80 101.50 106.89 B B B C3' C2' C1' U U U 146 146 146 N 8 7.31 0.70 108.50 115.81 B B B O4' C1' N1 U U U 146 146 146 N 8 -4.30 0.70 122.20 117.90 B B B N3 C2 O2 U U U 146 146 146 N 8 3.67 0.60 118.90 122.57 B B B N1 C2 O2 C C C 152 152 152 N 8 -5.07 0.70 121.90 116.83 B B B N3 C2 O2 C C C 152 152 152 N 8 3.64 0.60 118.90 122.54 B B B N1 C2 O2 C C C 154 154 154 N 8 -5.21 0.70 121.90 116.69 B B B N3 C2 O2 C C C 154 154 154 N 8 -4.71 0.70 121.90 117.19 B B B N3 C2 O2 C C C 158 158 158 N 8 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 159 159 159 N 8 -4.98 0.70 121.90 116.92 B B B N3 C2 O2 C C C 160 160 160 N 9 3.47 0.50 120.30 123.77 A A A NE CZ NH1 ARG ARG ARG 11 11 11 N 9 -4.73 0.70 121.90 117.17 B B B N3 C2 O2 C C C 96 96 96 N 9 -3.20 0.50 117.00 113.80 B B B C4 C5 C6 A A A 98 98 98 N 9 3.59 0.50 117.70 121.29 B B B C5 C6 N1 A A A 98 98 98 N 9 -5.67 0.60 118.60 112.93 B B B N1 C6 N6 A A A 98 98 98 N 9 -5.08 0.70 121.90 116.82 B B B N3 C2 O2 C C C 103 103 103 N 9 -5.10 0.70 121.90 116.80 B B B N3 C2 O2 C C C 105 105 105 N 9 -5.00 0.70 121.90 116.90 B B B N3 C2 O2 C C C 106 106 106 N 9 -5.28 0.70 121.90 116.62 B B B N3 C2 O2 C C C 108 108 108 N 9 -4.30 0.60 119.90 115.60 B B B N1 C6 O6 G G G 110 110 110 N 9 3.97 0.50 117.70 121.67 B B B C5 C6 N1 A A A 111 111 111 N 9 -5.56 0.60 118.60 113.04 B B B N1 C6 N6 A A A 111 111 111 N 9 -4.67 0.60 118.60 113.93 B B B N1 C6 N6 A A A 115 115 115 N 9 -4.74 0.60 118.60 113.86 B B B N1 C6 N6 A A A 119 119 119 N 9 -4.63 0.70 121.90 117.27 B B B N3 C2 O2 C C C 120 120 120 N 9 -5.78 0.60 118.60 112.82 B B B N1 C6 N6 A A A 122 122 122 N 9 -4.69 0.70 121.90 117.21 B B B N3 C2 O2 C C C 123 123 123 N 9 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 124 124 124 N 9 -4.92 0.70 121.90 116.98 B B B N3 C2 O2 C C C 125 125 125 N 9 -4.35 0.70 121.90 117.55 B B B N3 C2 O2 C C C 128 128 128 N 9 3.15 0.50 117.70 120.85 B B B C5 C6 N1 A A A 129 129 129 N 9 -3.65 0.60 118.60 114.95 B B B N1 C6 N6 A A A 129 129 129 N 9 4.55 0.70 108.50 113.05 B B B O4' C1' N9 G G G 130 130 130 N 9 -4.76 0.70 121.90 117.14 B B B N3 C2 O2 C C C 131 131 131 N 9 -4.45 0.60 119.90 115.45 B B B N1 C6 O6 G G G 135 135 135 N 9 3.80 0.60 128.60 132.40 B B B C5 C6 O6 G G G 135 135 135 N 9 4.96 0.70 108.50 113.46 B B B O4' C1' N1 U U U 137 137 137 N 9 -4.65 0.70 121.90 117.25 B B B N3 C2 O2 C C C 138 138 138 N 9 4.57 0.70 108.50 113.07 B B B O4' C1' N1 U U U 139 139 139 N 9 -4.92 0.70 121.90 116.98 B B B N3 C2 O2 C C C 142 142 142 N 9 3.73 0.50 117.70 121.43 B B B C5 C6 N1 A A A 143 143 143 N 9 -4.82 0.60 118.60 113.78 B B B N1 C6 N6 A A A 143 143 143 N 9 7.64 0.70 108.50 116.14 B B B O4' C1' N1 U U U 146 146 146 N 9 -4.98 0.70 122.20 117.22 B B B N3 C2 O2 U U U 146 146 146 N 9 -4.99 0.70 121.90 116.91 B B B N3 C2 O2 C C C 152 152 152 N 9 -5.10 0.70 121.90 116.80 B B B N3 C2 O2 C C C 154 154 154 N 9 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 158 158 158 N 9 -4.95 0.70 121.90 116.95 B B B N3 C2 O2 C C C 159 159 159 N 9 -4.94 0.70 121.90 116.96 B B B N3 C2 O2 C C C 160 160 160 N 10 3.34 0.50 120.30 123.64 A A A NE CZ NH1 ARG ARG ARG 16 16 16 N 10 3.48 0.50 120.30 123.78 A A A NE CZ NH1 ARG ARG ARG 17 17 17 N 10 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 96 96 96 N 10 -3.33 0.50 117.00 113.67 B B B C4 C5 C6 A A A 98 98 98 N 10 3.85 0.50 117.70 121.55 B B B C5 C6 N1 A A A 98 98 98 N 10 -6.54 0.60 118.60 112.06 B B B N1 C6 N6 A A A 98 98 98 N 10 4.21 0.70 108.50 112.71 B B B O4' C1' N1 C C C 103 103 103 N 10 -5.11 0.70 121.90 116.79 B B B N3 C2 O2 C C C 103 103 103 N 10 -4.98 0.70 121.90 116.92 B B B N3 C2 O2 C C C 105 105 105 N 10 -4.93 0.70 121.90 116.97 B B B N3 C2 O2 C C C 106 106 106 N 10 -5.16 0.70 121.90 116.74 B B B N3 C2 O2 C C C 108 108 108 N 10 -3.98 0.60 119.90 115.92 B B B N1 C6 O6 G G G 110 110 110 N 10 -3.09 0.50 117.00 113.91 B B B C4 C5 C6 A A A 111 111 111 N 10 3.66 0.50 117.70 121.36 B B B C5 C6 N1 A A A 111 111 111 N 10 -5.36 0.60 118.60 113.24 B B B N1 C6 N6 A A A 111 111 111 N 10 -3.22 0.50 117.00 113.78 B B B C4 C5 C6 A A A 115 115 115 N 10 3.14 0.50 117.70 120.84 B B B C5 C6 N1 A A A 115 115 115 N 10 -4.84 0.60 118.60 113.76 B B B N1 C6 N6 A A A 115 115 115 N 10 4.41 0.70 108.50 112.91 B B B O4' C1' N1 U U U 116 116 116 N 10 -4.70 0.60 118.60 113.90 B B B N1 C6 N6 A A A 119 119 119 N 10 -4.85 0.70 121.90 117.05 B B B N3 C2 O2 C C C 120 120 120 N 10 3.03 0.50 117.70 120.73 B B B C5 C6 N1 A A A 122 122 122 N 10 -7.19 0.60 118.60 111.41 B B B N1 C6 N6 A A A 122 122 122 N 10 -4.70 0.70 121.90 117.20 B B B N3 C2 O2 C C C 123 123 123 N 10 -4.84 0.70 121.90 117.06 B B B N3 C2 O2 C C C 124 124 124 N 10 -4.80 0.70 121.90 117.10 B B B N3 C2 O2 C C C 125 125 125 N 10 -4.36 0.70 121.90 117.54 B B B N3 C2 O2 C C C 128 128 128 N 10 -3.05 0.50 117.00 113.95 B B B C4 C5 C6 A A A 129 129 129 N 10 3.68 0.50 117.70 121.38 B B B C5 C6 N1 A A A 129 129 129 N 10 -5.31 0.60 118.60 113.29 B B B N1 C6 N6 A A A 129 129 129 N 10 5.80 0.70 108.50 114.30 B B B O4' C1' N9 G G G 130 130 130 N 10 -4.86 0.70 121.90 117.04 B B B N3 C2 O2 C C C 131 131 131 N 10 -3.77 0.60 119.90 116.13 B B B N1 C6 O6 G G G 135 135 135 N 10 4.78 0.70 108.50 113.28 B B B O4' C1' N1 U U U 137 137 137 N 10 -4.57 0.70 121.90 117.33 B B B N3 C2 O2 C C C 138 138 138 N 10 4.65 0.70 108.50 113.15 B B B O4' C1' N1 U U U 139 139 139 N 10 -5.09 0.70 121.90 116.81 B B B N3 C2 O2 C C C 142 142 142 N 10 -3.34 0.50 117.00 113.66 B B B C4 C5 C6 A A A 143 143 143 N 10 3.34 0.50 117.70 121.04 B B B C5 C6 N1 A A A 143 143 143 N 10 -5.20 0.60 118.60 113.40 B B B N1 C6 N6 A A A 143 143 143 N 10 -4.48 0.70 122.20 117.72 B B B N3 C2 O2 U U U 146 146 146 N 10 -4.83 0.70 121.90 117.07 B B B N3 C2 O2 C C C 152 152 152 N 10 -5.16 0.70 121.90 116.74 B B B N3 C2 O2 C C C 154 154 154 N 10 -4.77 0.70 121.90 117.13 B B B N3 C2 O2 C C C 158 158 158 N 10 -4.91 0.70 121.90 116.99 B B B N3 C2 O2 C C C 159 159 159 N 10 -5.00 0.70 121.90 116.90 B B B N3 C2 O2 C C C 160 160 160 N 1 A VAL 3 64.45 -25.38 1 A ASP 10 53.23 -130.64 1 A SER 19 -49.48 -16.49 1 A ARG 23 -66.00 0.82 2 A LYS 8 57.21 8.12 2 A GLN 9 62.42 173.50 2 A GLU 15 60.10 170.18 2 A ARG 16 -144.94 -13.05 2 A ARG 18 62.94 -2.37 2 A LEU 21 -62.27 91.16 2 A ARG 23 -64.90 0.76 2 A PRO 43 -39.21 93.22 2 A ARG 44 49.09 29.44 3 A VAL 4 67.84 -51.40 3 A ARG 16 -140.67 45.92 3 A SER 19 -48.63 -17.16 3 A ARG 23 -69.02 6.85 3 A PRO 49 -77.77 38.37 4 A ARG 16 -141.96 -9.43 4 A ARG 18 38.36 63.13 4 A PRO 51 -48.66 157.27 5 A GLN 9 -153.03 -42.85 5 A GLU 15 -150.06 -41.56 5 A ARG 23 -67.66 14.88 6 A ARG 11 -143.71 -15.80 6 A ARG 23 -69.78 14.80 6 A PRO 46 -52.25 102.14 6 A PRO 49 -79.70 26.88 6 A THR 53 -157.65 -38.45 7 A ARG 16 -143.07 30.03 7 A ARG 17 -148.92 -3.73 8 A GLU 15 -142.74 10.65 8 A ARG 47 58.31 -165.84 8 A PRO 49 -77.57 48.61 9 A ARG 18 -76.05 36.52 9 A SER 19 -47.01 107.93 9 A ARG 23 -66.36 2.18 10 A GLN 7 53.94 18.31 10 A GLN 12 51.47 -101.99 10 A PRO 46 -47.24 162.34 fewest violations, model1 Solution NMR structure of the U5-primer binding site (U5-PBS) domain of murine leukemia virus RNA genome bound to the retroviral nucleocapsid protein 1 N N 2 N N 3 N N A ARG 17 A ARG 17 HELX_P A LEU 21 A LEU 21 5 1 5 A TRP 35 A TRP 35 HELX_P A CYS 39 A CYS 39 5 2 5 metalc 2.689 A CYS 26 A SG CYS 26 1_555 A ZN 101 C ZN ZN 1_555 metalc 2.665 A CYS 29 A SG CYS 29 1_555 A ZN 101 C ZN ZN 1_555 metalc 2.497 A HIS 34 A NE2 HIS 34 1_555 A ZN 101 C ZN ZN 1_555 metalc 2.238 A CYS 39 A SG CYS 39 1_555 A ZN 101 C ZN ZN 1_555 hydrog WATSON-CRICK B G 93 B N1 G 1 1_555 B C 160 B N3 C 68 1_555 hydrog WATSON-CRICK B G 93 B N2 G 1 1_555 B C 160 B O2 C 68 1_555 hydrog WATSON-CRICK B G 93 B O6 G 1 1_555 B C 160 B N4 C 68 1_555 hydrog WATSON-CRICK B G 94 B N1 G 2 1_555 B C 159 B N3 C 67 1_555 hydrog WATSON-CRICK B G 94 B N2 G 2 1_555 B C 159 B O2 C 67 1_555 hydrog WATSON-CRICK B G 94 B O6 G 2 1_555 B C 159 B N4 C 67 1_555 hydrog WATSON-CRICK B G 95 B N1 G 3 1_555 B C 158 B N3 C 66 1_555 hydrog WATSON-CRICK B G 95 B N2 G 3 1_555 B C 158 B O2 C 66 1_555 hydrog WATSON-CRICK B G 95 B O6 G 3 1_555 B C 158 B N4 C 66 1_555 hydrog WATSON-CRICK B C 96 B N3 C 4 1_555 B G 157 B N1 G 65 1_555 hydrog WATSON-CRICK B C 96 B N4 C 4 1_555 B G 157 B O6 G 65 1_555 hydrog WATSON-CRICK B C 96 B O2 C 4 1_555 B G 157 B N2 G 65 1_555 hydrog TYPE_28_PAIR B G 97 B N1 G 5 1_555 B U 156 B O2 U 64 1_555 hydrog TYPE_28_PAIR B G 97 B O6 G 5 1_555 B U 156 B N3 U 64 1_555 hydrog A-G MISPAIR B A 98 B N6 A 6 1_555 B G 155 B N7 G 63 1_555 hydrog WATSON-CRICK B G 99 B N1 G 7 1_555 B C 154 B N3 C 62 1_555 hydrog WATSON-CRICK B G 99 B N2 G 7 1_555 B C 154 B O2 C 62 1_555 hydrog WATSON-CRICK B G 99 B O6 G 7 1_555 B C 154 B N4 C 62 1_555 hydrog TYPE_28_PAIR B G 100 B N1 G 8 1_555 B U 153 B O2 U 61 1_555 hydrog TYPE_28_PAIR B G 100 B O6 G 8 1_555 B U 153 B N3 U 61 1_555 hydrog WATSON-CRICK B G 101 B N1 G 9 1_555 B C 152 B N3 C 60 1_555 hydrog WATSON-CRICK B G 101 B N2 G 9 1_555 B C 152 B O2 C 60 1_555 hydrog WATSON-CRICK B G 101 B O6 G 9 1_555 B C 152 B N4 C 60 1_555 hydrog TYPE_28_PAIR B U 102 B N3 U 10 1_555 B G 151 B O6 G 59 1_555 hydrog TYPE_28_PAIR B U 102 B O2 U 10 1_555 B G 151 B N1 G 59 1_555 hydrog WATSON-CRICK B C 103 B N3 C 11 1_555 B G 150 B N1 G 58 1_555 hydrog WATSON-CRICK B C 103 B N4 C 11 1_555 B G 150 B O6 G 58 1_555 hydrog WATSON-CRICK B C 103 B O2 C 11 1_555 B G 150 B N2 G 58 1_555 hydrog TYPE_28_PAIR B U 104 B N3 U 12 1_555 B G 149 B O6 G 57 1_555 hydrog TYPE_28_PAIR B U 104 B O2 U 12 1_555 B G 149 B N1 G 57 1_555 hydrog WATSON-CRICK B C 105 B N3 C 13 1_555 B G 148 B N1 G 56 1_555 hydrog WATSON-CRICK B C 105 B N4 C 13 1_555 B G 148 B O6 G 56 1_555 hydrog WATSON-CRICK B C 105 B O2 C 13 1_555 B G 148 B N2 G 56 1_555 hydrog WATSON-CRICK B C 106 B N3 C 14 1_555 B G 147 B N1 G 55 1_555 hydrog WATSON-CRICK B C 106 B N4 C 14 1_555 B G 147 B O6 G 55 1_555 hydrog WATSON-CRICK B C 106 B O2 C 14 1_555 B G 147 B N2 G 55 1_555 hydrog TYPE_28_PAIR B G 112 B N1 G 20 1_555 B U 144 B O2 U 52 1_555 hydrog TYPE_28_PAIR B G 112 B O6 G 20 1_555 B U 144 B N3 U 52 1_555 hydrog WATSON-CRICK B U 113 B N3 U 21 1_555 B A 143 B N1 A 51 1_555 hydrog WATSON-CRICK B U 113 B O4 U 21 1_555 B A 143 B N6 A 51 1_555 hydrog WATSON-CRICK B G 114 B N1 G 22 1_555 B C 142 B N3 C 50 1_555 hydrog WATSON-CRICK B G 114 B N2 G 22 1_555 B C 142 B O2 C 50 1_555 hydrog WATSON-CRICK B G 114 B O6 G 22 1_555 B C 142 B N4 C 50 1_555 hydrog WATSON-CRICK B A 115 B N1 A 23 1_555 B U 141 B N3 U 49 1_555 hydrog WATSON-CRICK B A 115 B N6 A 23 1_555 B U 141 B O4 U 49 1_555 hydrog TYPE_16_PAIR B U 116 B N3 U 24 1_555 B U 140 B O2 U 48 1_555 hydrog TYPE_16_PAIR B U 116 B O4 U 24 1_555 B U 140 B N3 U 48 1_555 hydrog TYPE_16_PAIR B U 117 B N3 U 25 1_555 B U 139 B O4 U 47 1_555 hydrog TYPE_16_PAIR B U 117 B O2 U 25 1_555 B U 139 B N3 U 47 1_555 hydrog WATSON-CRICK B G 118 B N1 G 26 1_555 B C 138 B N3 C 46 1_555 hydrog WATSON-CRICK B G 118 B N2 G 26 1_555 B C 138 B O2 C 46 1_555 hydrog WATSON-CRICK B G 118 B O6 G 26 1_555 B C 138 B N4 C 46 1_555 hydrog WATSON-CRICK B A 119 B N1 A 27 1_555 B U 137 B N3 U 45 1_555 hydrog WATSON-CRICK B A 119 B N6 A 27 1_555 B U 137 B O4 U 45 1_555 hydrog WATSON-CRICK B C 120 B N3 C 28 1_555 B G 136 B N1 G 44 1_555 hydrog WATSON-CRICK B C 120 B N4 C 28 1_555 B G 136 B O6 G 44 1_555 hydrog WATSON-CRICK B C 120 B O2 C 28 1_555 B G 136 B N2 G 44 1_555 hydrog TYPE_28_PAIR B U 121 B N3 U 29 1_555 B G 135 B O6 G 43 1_555 hydrog TYPE_28_PAIR B U 121 B O2 U 29 1_555 B G 135 B N1 G 43 1_555 hydrog TYPE_11_PAIR B A 122 B N6 A 30 1_555 B G 135 B N3 G 43 1_555 hydrog TYPE_11_PAIR B A 122 B N7 A 30 1_555 B G 135 B N2 G 43 1_555 hydrog WATSON-CRICK B C 123 B N3 C 31 1_555 B G 134 B N1 G 42 1_555 hydrog WATSON-CRICK B C 123 B N4 C 31 1_555 B G 134 B O6 G 42 1_555 hydrog WATSON-CRICK B C 123 B O2 C 31 1_555 B G 134 B N2 G 42 1_555 hydrog WATSON-CRICK B C 124 B N3 C 32 1_555 B G 133 B N1 G 41 1_555 hydrog WATSON-CRICK B C 124 B N4 C 32 1_555 B G 133 B O6 G 41 1_555 hydrog WATSON-CRICK B C 124 B O2 C 32 1_555 B G 133 B N2 G 41 1_555 hydrog WATSON-CRICK B C 125 B N3 C 33 1_555 B G 132 B N1 G 40 1_555 hydrog WATSON-CRICK B C 125 B N4 C 33 1_555 B G 132 B O6 G 40 1_555 hydrog WATSON-CRICK B C 125 B O2 C 33 1_555 B G 132 B N2 G 40 1_555 hydrog WATSON-CRICK B G 126 B N1 G 34 1_555 B C 131 B N3 C 39 1_555 hydrog WATSON-CRICK B G 126 B N2 G 34 1_555 B C 131 B O2 C 39 1_555 hydrog WATSON-CRICK B G 126 B O6 G 34 1_555 B C 131 B N4 C 39 1_555 hydrog U-G MISPAIR B U 127 B O2 U 35 1_555 B G 130 B N1 G 38 1_555 VIRAL PROTEIN/RNA VIRAL PROTEIN-RNA complex, RETROVIRAL PRIMER ANNEALING, NUCLEOCAPSID CHAPERONE, PRIMER BINDING SITE A GLY 45 A GLY 45 1 A PRO 46 A PRO 46 29.83 A GLY 45 A GLY 45 2 A PRO 46 A PRO 46 -26.79 A GLY 45 A GLY 45 3 A PRO 46 A PRO 46 26.19 A GLY 45 A GLY 45 4 A PRO 46 A PRO 46 -26.05 A GLY 45 A GLY 45 6 A PRO 46 A PRO 46 -29.37 A GLY 45 A GLY 45 7 A PRO 46 A PRO 46 -27.70 A GLY 45 A GLY 45 8 A PRO 46 A PRO 46 -29.27 A GLY 45 A GLY 45 9 A PRO 46 A PRO 46 26.28 A GLY 45 A GLY 45 10 A PRO 46 A PRO 46 -28.60 POL_MLVMS UNP 1 479 P03355 ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 2MQV PDB 2 2MQV 479 534 2MQV 1 56 P03355 A 1 1 56 93 160 2MQV 93 160 2MQV B 2 1 68 BINDING SITE FOR RESIDUE ZN A 101 A ZN 101 Software 4 A CYS 26 A CYS 26 4 1_555 A CYS 29 A CYS 29 4 1_555 A HIS 34 A HIS 34 4 1_555 A CYS 39 A CYS 39 4 1_555