1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Cavanagh, J. Bobay, B.G. Sullivan, D.M. Thompson, R.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 S C N 285 N C N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 N C N 307 N C N 308 N C N 309 N C N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N C N 330 N C N 331 N C N 332 N N N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N S N 356 N C N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N C N 375 N C N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N N N 387 S C N 388 N C N 389 N O N 390 N C N 391 N O N 392 N O N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N N N 401 S C N 402 N C N 403 N O N 404 R C N 405 N O N 406 N C N 407 N O N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N N N 418 S C N 419 N C N 420 N O N 421 N C Y 422 N C Y 423 N C Y 424 N C Y 425 N C Y 426 N C Y 427 N C N 428 N O N 429 N O N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N N N 442 S C N 443 N C N 444 N O N 445 N C N 446 N C N 447 N C N 448 N O N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N doub N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N doub N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing Y 420 N doub Y 421 N sing Y 422 N sing N 423 N sing Y 424 N doub N 425 N sing Y 426 N doub N 427 N sing Y 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N doub N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing UK Structure STRUE6 2005 0969-2126 16 1702 1713 10.1016/j.str.2008.08.014 19000822 Insights into the Nature of DNA Binding of AbrB-like Transcription Factors 2008 10.2210/pdb2k1n/pdb pdb_00002k1n 7696.008 DNA (25-MER) A10G 1 syn polymer 7655.984 DNA (25-MER) A10G 1 syn polymer 6342.559 AbrB family transcriptional regulator sequence database residues 3-57 4 man polymer AbrB/MazE/SpoVT family DNA-binding domain-containing protein,Transcriptional regulator for transition stateprotein,Transition state regulatory protein AbrB no no (DA)(DT)(DG)(DA)(DT)(DT)(DG)(DA)(DC)(DA)(DA)(DT)(DT)(DA)(DT)(DT)(DG)(DG)(DA)(DA) (DA)(DC)(DC)(DT)(DT) ATGATTGACAATTATTGGAAACCTT E polydeoxyribonucleotide no no (DA)(DA)(DG)(DG)(DT)(DT)(DT)(DC)(DC)(DA)(DA)(DT)(DA)(DA)(DT)(DT)(DG)(DT)(DC)(DA) (DA)(DT)(DC)(DA)(DT) AAGGTTTCCAATAATTGTCAATCAT F polydeoxyribonucleotide no no MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQ MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQ A,B,C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacillus subtilis sample 1 55 B4122_4520, B4417_1778, DFO69_4335, FAL52_19720, SC09_Contig28orf00381 1423 Bacillus subtilis 562 Escherichia coli BL21DE3 pET24b vector Biological sequence N-terminal domain of the Transition State Regulator AbrB bound to a DNA target (abrB8) -1.566 1 20 E 1 F 25 -4.603 E_DA1:DT25_F 1 1.181 0.333 -0.033 -0.012 2.750 1 20 E 2 F 24 0.282 E_DT2:DA24_F 2 -4.008 0.317 -0.171 -0.041 -1.337 1 19 E 3 F 23 2.464 E_DG3:DC23_F 3 -0.392 -0.104 -0.142 0.043 -1.527 1 20 E 4 F 22 4.287 E_DA4:DT22_F 4 2.317 0.278 -0.216 0.077 3.855 1 20 E 5 F 21 -0.382 E_DT5:DA21_F 5 2.540 -0.185 -0.355 0.148 0.662 1 20 E 6 F 20 -1.265 E_DT6:DA20_F 6 1.420 -0.234 -0.223 0.134 0.149 1 19 E 7 F 19 2.785 E_DG7:DC19_F 7 5.447 -0.535 -0.359 -0.034 -4.746 1 20 E 8 F 18 -4.202 E_DA8:DT18_F 8 5.426 0.373 -0.448 -0.019 0.866 1 19 E 9 F 17 1.999 E_DC9:DG17_F 9 4.411 0.259 -0.284 0.074 -2.743 1 20 E 10 F 16 -0.068 E_DA10:DT16_F 10 2.862 0.207 -0.334 0.145 -1.594 1 20 E 11 F 15 -0.007 E_DA11:DT15_F 11 3.984 0.149 -0.324 0.174 2.930 1 20 E 12 F 14 -1.839 E_DT12:DA14_F 12 1.725 -0.066 -0.279 0.188 2.478 1 20 E 13 F 13 5.520 E_DT13:DA13_F 13 3.908 -0.423 -0.390 0.066 -2.535 1 20 E 14 F 12 2.311 E_DA14:DT12_F 14 4.122 0.388 -0.348 0.108 2.367 1 20 E 15 F 11 3.831 E_DT15:DA11_F 15 3.915 0.076 -0.298 0.085 5.205 1 20 E 16 F 10 1.599 E_DT16:DA10_F 16 2.567 -0.055 -0.501 0.132 -2.490 1 19 E 17 F 9 5.730 E_DG17:DC9_F 17 5.869 -0.364 -0.386 -0.054 -1.108 1 19 E 18 F 8 5.378 E_DG18:DC8_F 18 4.547 -0.041 -0.414 -0.051 -4.100 1 20 E 19 F 7 2.826 E_DA19:DT7_F 19 3.030 0.339 -0.476 0.094 -1.061 1 20 E 20 F 6 5.463 E_DA20:DT6_F 20 2.913 0.049 -0.293 0.053 -1.673 1 20 E 21 F 5 4.143 E_DA21:DT5_F 21 4.784 0.291 -0.368 0.067 3.241 1 19 E 22 F 4 4.870 E_DC22:DG4_F 22 6.471 0.574 -0.476 -0.099 -0.368 1 19 E 23 F 3 3.363 E_DC23:DG3_F 23 5.356 0.107 -0.341 0.067 -1.728 1 20 E 24 F 2 5.788 E_DT24:DA2_F 24 -2.766 -0.362 -0.094 -0.004 3.552 1 20 E 25 F 1 -9.294 E_DT25:DA1_F 25 2.141 -0.017 -0.112 -0.040 3.772 34.519 E E 1 2 15.762 F F 25 24 3.500 9.243 0.313 1.472 EE_DA1DT2:DA24DT25_FF 1 1.414 -2.411 33.266 0.858 -0.280 3.350 38.990 E E 2 3 8.173 F F 24 23 3.149 5.438 0.250 1.743 EE_DT2DG3:DC23DA24_FF 2 -0.601 0.904 38.619 1.955 -0.447 3.456 40.571 E E 3 4 0.988 F F 23 22 3.444 0.685 0.049 1.006 EE_DG3DA4:DT22DC23_FF 3 -1.496 2.158 40.539 1.370 -0.247 3.401 34.284 E E 4 5 -7.795 F F 22 21 3.475 -4.582 -0.400 0.340 EE_DA4DT5:DA21DT22_FF 4 0.027 -0.046 33.986 1.337 0.683 3.420 37.800 E E 5 6 7.710 F F 21 20 3.352 4.976 0.256 0.678 EE_DT5DT6:DA20DA21_FF 5 3.121 -4.835 37.358 0.379 0.023 3.195 37.953 E E 6 7 -4.620 F F 20 19 3.302 -3.000 0.431 1.571 EE_DT6DG7:DC19DA20_FF 6 2.707 -4.169 37.745 2.797 -0.319 3.571 38.575 E E 7 8 15.476 F F 19 18 3.477 10.084 -1.137 0.356 EE_DG7DA8:DT18DC19_FF 7 -5.154 7.910 36.935 -0.835 1.019 3.275 37.171 E E 8 9 -12.923 F F 18 17 3.423 -8.174 0.243 0.291 EE_DA8DC9:DG17DT18_FF 8 -1.017 1.607 36.278 1.586 -0.522 3.391 37.330 E E 9 10 2.707 F F 17 16 3.375 1.732 -0.068 0.552 EE_DC9DA10:DT16DG17_FF 9 1.648 -2.577 37.256 0.626 0.332 3.350 36.916 E E 10 11 -1.662 F F 16 15 3.365 -1.051 -0.208 0.702 EE_DA10DA11:DT15DT16_FF 10 -3.064 4.844 36.779 1.255 -0.097 3.288 33.433 E E 11 12 -3.567 F F 15 14 3.286 -2.050 -0.245 -0.065 EE_DA11DT12:DA14DT15_FF 11 -0.671 1.166 33.365 0.229 0.314 3.295 38.188 E E 12 13 -8.144 F F 14 13 3.342 -5.290 0.959 0.946 EE_DT12DT13:DA13DA14_FF 12 6.212 -9.563 37.338 2.131 -0.662 3.536 38.157 E E 13 14 11.795 F F 13 12 3.441 7.649 -0.771 0.525 EE_DT13DA14:DT12DA13_FF 13 -3.921 6.046 37.212 -0.241 0.644 3.396 34.319 E E 14 15 -8.888 F F 12 11 3.425 -5.225 0.054 -0.060 EE_DA14DT15:DA11DT12_FF 14 0.177 -0.301 33.930 0.757 -0.062 3.211 36.851 E E 15 16 -6.226 F F 11 10 3.281 -3.924 0.062 0.451 EE_DT15DT16:DA10DA11_FF 15 3.222 -5.112 36.511 1.245 0.337 3.246 36.423 E E 16 17 10.317 F F 10 9 3.284 6.415 0.284 0.158 EE_DT16DG17:DC9DA10_FF 16 -1.737 2.793 35.832 -0.644 -0.697 3.600 37.447 E E 17 18 -8.981 F F 9 8 3.700 -5.744 -0.025 0.390 EE_DG17DG18:DC8DC9_FF 17 0.614 -0.961 37.015 1.453 0.129 3.325 39.457 E E 18 19 4.452 F F 8 7 3.297 3.003 -0.285 0.492 EE_DG18DA19:DT7DC8_FF 18 -0.163 0.242 39.347 0.370 0.402 3.238 35.539 E E 19 20 -2.215 F F 7 6 3.259 -1.351 0.025 0.308 EE_DA19DA20:DT6DT7_FF 19 -2.233 3.661 35.447 0.701 -0.365 3.498 37.653 E E 20 21 -3.560 F F 6 5 3.512 -2.295 -0.297 0.307 EE_DA20DA21:DT5DT6_FF 20 -1.954 3.031 37.536 0.795 0.187 3.303 37.244 E E 21 22 -6.937 F F 5 4 3.336 -4.419 -0.103 0.105 EE_DA21DC22:DG4DT5_FF 21 -1.703 2.674 36.952 0.762 -0.070 3.269 34.952 E E 22 23 1.911 F F 4 3 3.281 1.148 -0.099 -0.352 EE_DC22DC23:DG3DG4_FF 22 -0.288 0.479 34.932 -0.760 0.122 3.483 37.444 E E 23 24 -2.131 F F 3 2 3.507 -1.364 0.293 0.893 EE_DC23DT24:DA2DG3_FF 23 4.841 -7.562 37.116 1.584 0.226 3.599 36.106 E E 24 25 7.239 F F 2 1 3.466 4.475 -1.253 0.987 EE_DT24DT25:DA1DA2_FF 24 -1.214 1.963 35.817 0.906 1.835 database_2 entity entity_name_com entity_src_gen pdbx_entity_src_syn pdbx_struct_assembly pdbx_struct_oper_list struct_ref struct_ref_seq chem_comp_atom chem_comp_bond pdbx_entry_details pdbx_modification_feature repository Initial release Version format compliance Database references Derived calculations Source and taxonomy Structure summary Data collection Structure summary 1 0 2008-11-11 1 1 2011-07-13 1 2 2022-03-16 1 3 2024-10-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity.pdbx_description _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.pdbx_seq_type Structure of the N-terminal domain of AbrB BMRB Y RCSB 2008-03-10 REL REL 32630 Synthetic Construct sample 1 25 32630 Synthetic Construct sample 1 25 Y A CYS 54 Disulfide bridge SG C CYS 54 C CYS 54 SG E CYS 54 1_555 1_555 None B CYS 54 Disulfide bridge SG D CYS 54 D CYS 54 SG F CYS 54 1_555 1_555 None structures with the lowest energy 200 10 2D 1H-15N HSQC 0.5 mM [U-99% 15N] 10 5.5 ambient 305 K simulated annealing 1 lowest energy 0.5 mM [U-99% 15N] AbrBN55, 90% H2O/10% D2O 90% H2O/10% D2O Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Johnson, One Moon Scientific data analysis NMRView Cyril Dominguez, Rolf Boelens and Alexandre M.J.J. Bonvin refinement HADDOCK 1.3 600 Varian INOVA Varian INOVA A 1 n 1 DA 1 E T 2 n 2 DT 2 E G 3 n 3 DG 3 E A 4 n 4 DA 4 E T 5 n 5 DT 5 E T 6 n 6 DT 6 E G 7 n 7 DG 7 E A 8 n 8 DA 8 E C 9 n 9 DC 9 E A 10 n 10 DA 10 E A 11 n 11 DA 11 E T 12 n 12 DT 12 E T 13 n 13 DT 13 E A 14 n 14 DA 14 E T 15 n 15 DT 15 E T 16 n 16 DT 16 E G 17 n 17 DG 17 E G 18 n 18 DG 18 E A 19 n 19 DA 19 E A 20 n 20 DA 20 E A 21 n 21 DA 21 E C 22 n 22 DC 22 E C 23 n 23 DC 23 E T 24 n 24 DT 24 E T 25 n 25 DT 25 E A 1 n 1 DA 1 F A 2 n 2 DA 2 F G 3 n 3 DG 3 F G 4 n 4 DG 4 F T 5 n 5 DT 5 F T 6 n 6 DT 6 F T 7 n 7 DT 7 F C 8 n 8 DC 8 F C 9 n 9 DC 9 F A 10 n 10 DA 10 F A 11 n 11 DA 11 F T 12 n 12 DT 12 F A 13 n 13 DA 13 F A 14 n 14 DA 14 F T 15 n 15 DT 15 F T 16 n 16 DT 16 F G 17 n 17 DG 17 F T 18 n 18 DT 18 F C 19 n 19 DC 19 F A 20 n 20 DA 20 F A 21 n 21 DA 21 F T 22 n 22 DT 22 F C 23 n 23 DC 23 F A 24 n 24 DA 24 F T 25 n 25 DT 25 F MET 1 n 1 MET 1 A LYS 2 n 2 LYS 2 A SER 3 n 3 SER 3 A THR 4 n 4 THR 4 A GLY 5 n 5 GLY 5 A ILE 6 n 6 ILE 6 A VAL 7 n 7 VAL 7 A ARG 8 n 8 ARG 8 A LYS 9 n 9 LYS 9 A VAL 10 n 10 VAL 10 A ASP 11 n 11 ASP 11 A GLU 12 n 12 GLU 12 A LEU 13 n 13 LEU 13 A GLY 14 n 14 GLY 14 A ARG 15 n 15 ARG 15 A VAL 16 n 16 VAL 16 A VAL 17 n 17 VAL 17 A ILE 18 n 18 ILE 18 A PRO 19 n 19 PRO 19 A ILE 20 n 20 ILE 20 A GLU 21 n 21 GLU 21 A LEU 22 n 22 LEU 22 A ARG 23 n 23 ARG 23 A ARG 24 n 24 ARG 24 A THR 25 n 25 THR 25 A LEU 26 n 26 LEU 26 A GLY 27 n 27 GLY 27 A ILE 28 n 28 ILE 28 A ALA 29 n 29 ALA 29 A GLU 30 n 30 GLU 30 A LYS 31 n 31 LYS 31 A ASP 32 n 32 ASP 32 A ALA 33 n 33 ALA 33 A LEU 34 n 34 LEU 34 A GLU 35 n 35 GLU 35 A ILE 36 n 36 ILE 36 A TYR 37 n 37 TYR 37 A VAL 38 n 38 VAL 38 A ASP 39 n 39 ASP 39 A ASP 40 n 40 ASP 40 A GLU 41 n 41 GLU 41 A LYS 42 n 42 LYS 42 A ILE 43 n 43 ILE 43 A ILE 44 n 44 ILE 44 A LEU 45 n 45 LEU 45 A LYS 46 n 46 LYS 46 A LYS 47 n 47 LYS 47 A TYR 48 n 48 TYR 48 A LYS 49 n 49 LYS 49 A PRO 50 n 50 PRO 50 A ASN 51 n 51 ASN 51 A MET 52 n 52 MET 52 A THR 53 n 53 THR 53 A CYS 54 n 54 CYS 54 A GLN 55 n 55 GLN 55 A MET 1 n 1 MET 1 B LYS 2 n 2 LYS 2 B SER 3 n 3 SER 3 B THR 4 n 4 THR 4 B GLY 5 n 5 GLY 5 B ILE 6 n 6 ILE 6 B VAL 7 n 7 VAL 7 B ARG 8 n 8 ARG 8 B LYS 9 n 9 LYS 9 B VAL 10 n 10 VAL 10 B ASP 11 n 11 ASP 11 B GLU 12 n 12 GLU 12 B LEU 13 n 13 LEU 13 B GLY 14 n 14 GLY 14 B ARG 15 n 15 ARG 15 B VAL 16 n 16 VAL 16 B VAL 17 n 17 VAL 17 B ILE 18 n 18 ILE 18 B PRO 19 n 19 PRO 19 B ILE 20 n 20 ILE 20 B GLU 21 n 21 GLU 21 B LEU 22 n 22 LEU 22 B ARG 23 n 23 ARG 23 B ARG 24 n 24 ARG 24 B THR 25 n 25 THR 25 B LEU 26 n 26 LEU 26 B GLY 27 n 27 GLY 27 B ILE 28 n 28 ILE 28 B ALA 29 n 29 ALA 29 B GLU 30 n 30 GLU 30 B LYS 31 n 31 LYS 31 B ASP 32 n 32 ASP 32 B ALA 33 n 33 ALA 33 B LEU 34 n 34 LEU 34 B GLU 35 n 35 GLU 35 B ILE 36 n 36 ILE 36 B TYR 37 n 37 TYR 37 B VAL 38 n 38 VAL 38 B ASP 39 n 39 ASP 39 B ASP 40 n 40 ASP 40 B GLU 41 n 41 GLU 41 B LYS 42 n 42 LYS 42 B ILE 43 n 43 ILE 43 B ILE 44 n 44 ILE 44 B LEU 45 n 45 LEU 45 B LYS 46 n 46 LYS 46 B LYS 47 n 47 LYS 47 B TYR 48 n 48 TYR 48 B LYS 49 n 49 LYS 49 B PRO 50 n 50 PRO 50 B ASN 51 n 51 ASN 51 B MET 52 n 52 MET 52 B THR 53 n 53 THR 53 B CYS 54 n 54 CYS 54 B GLN 55 n 55 GLN 55 B MET 1 n 1 MET 1 C LYS 2 n 2 LYS 2 C SER 3 n 3 SER 3 C THR 4 n 4 THR 4 C GLY 5 n 5 GLY 5 C ILE 6 n 6 ILE 6 C VAL 7 n 7 VAL 7 C ARG 8 n 8 ARG 8 C LYS 9 n 9 LYS 9 C VAL 10 n 10 VAL 10 C ASP 11 n 11 ASP 11 C GLU 12 n 12 GLU 12 C LEU 13 n 13 LEU 13 C GLY 14 n 14 GLY 14 C ARG 15 n 15 ARG 15 C VAL 16 n 16 VAL 16 C VAL 17 n 17 VAL 17 C ILE 18 n 18 ILE 18 C PRO 19 n 19 PRO 19 C ILE 20 n 20 ILE 20 C GLU 21 n 21 GLU 21 C LEU 22 n 22 LEU 22 C ARG 23 n 23 ARG 23 C ARG 24 n 24 ARG 24 C THR 25 n 25 THR 25 C LEU 26 n 26 LEU 26 C GLY 27 n 27 GLY 27 C ILE 28 n 28 ILE 28 C ALA 29 n 29 ALA 29 C GLU 30 n 30 GLU 30 C LYS 31 n 31 LYS 31 C ASP 32 n 32 ASP 32 C ALA 33 n 33 ALA 33 C LEU 34 n 34 LEU 34 C GLU 35 n 35 GLU 35 C ILE 36 n 36 ILE 36 C TYR 37 n 37 TYR 37 C VAL 38 n 38 VAL 38 C ASP 39 n 39 ASP 39 C ASP 40 n 40 ASP 40 C GLU 41 n 41 GLU 41 C LYS 42 n 42 LYS 42 C ILE 43 n 43 ILE 43 C ILE 44 n 44 ILE 44 C LEU 45 n 45 LEU 45 C LYS 46 n 46 LYS 46 C LYS 47 n 47 LYS 47 C TYR 48 n 48 TYR 48 C LYS 49 n 49 LYS 49 C PRO 50 n 50 PRO 50 C ASN 51 n 51 ASN 51 C MET 52 n 52 MET 52 C THR 53 n 53 THR 53 C CYS 54 n 54 CYS 54 C GLN 55 n 55 GLN 55 C MET 1 n 1 MET 1 D LYS 2 n 2 LYS 2 D SER 3 n 3 SER 3 D THR 4 n 4 THR 4 D GLY 5 n 5 GLY 5 D ILE 6 n 6 ILE 6 D VAL 7 n 7 VAL 7 D ARG 8 n 8 ARG 8 D LYS 9 n 9 LYS 9 D VAL 10 n 10 VAL 10 D ASP 11 n 11 ASP 11 D GLU 12 n 12 GLU 12 D LEU 13 n 13 LEU 13 D GLY 14 n 14 GLY 14 D ARG 15 n 15 ARG 15 D VAL 16 n 16 VAL 16 D VAL 17 n 17 VAL 17 D ILE 18 n 18 ILE 18 D PRO 19 n 19 PRO 19 D ILE 20 n 20 ILE 20 D GLU 21 n 21 GLU 21 D LEU 22 n 22 LEU 22 D ARG 23 n 23 ARG 23 D ARG 24 n 24 ARG 24 D THR 25 n 25 THR 25 D LEU 26 n 26 LEU 26 D GLY 27 n 27 GLY 27 D ILE 28 n 28 ILE 28 D ALA 29 n 29 ALA 29 D GLU 30 n 30 GLU 30 D LYS 31 n 31 LYS 31 D ASP 32 n 32 ASP 32 D ALA 33 n 33 ALA 33 D LEU 34 n 34 LEU 34 D GLU 35 n 35 GLU 35 D ILE 36 n 36 ILE 36 D TYR 37 n 37 TYR 37 D VAL 38 n 38 VAL 38 D ASP 39 n 39 ASP 39 D ASP 40 n 40 ASP 40 D GLU 41 n 41 GLU 41 D LYS 42 n 42 LYS 42 D ILE 43 n 43 ILE 43 D ILE 44 n 44 ILE 44 D LEU 45 n 45 LEU 45 D LYS 46 n 46 LYS 46 D LYS 47 n 47 LYS 47 D TYR 48 n 48 TYR 48 D LYS 49 n 49 LYS 49 D PRO 50 n 50 PRO 50 D ASN 51 n 51 ASN 51 D MET 52 n 52 MET 52 D THR 53 n 53 THR 53 D CYS 54 n 54 CYS 54 D GLN 55 n 55 GLN 55 D author_defined_assembly 6 hexameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 6 C N ILE 6 B O ILE 36 D O ILE 36 B N TYR 37 D N TYR 37 B O ILE 44 D O ILE 44 B O LEU 45 D O LEU 45 A N ILE 43 C N ILE 43 A O LYS 42 C O LYS 42 A N ASP 39 C N ASP 39 A N LEU 34 C N LEU 34 B O ARG 8 D O ARG 8 C N ILE 6 E N ILE 6 D O ILE 36 F O ILE 36 D N TYR 37 F N TYR 37 D O ILE 44 F O ILE 44 D O ILE 43 F O ILE 43 C N LEU 45 E N LEU 45 C O ILE 44 E O ILE 44 C N TYR 37 E N TYR 37 C N ILE 36 E N ILE 36 D O ILE 6 F O ILE 6 1 E F H22 O2 DG DC 17 9 1.58 1 B B HZ2 OD1 LYS ASP 9 11 1.58 1 D D OE2 HZ2 GLU LYS 35 46 1.58 1 E F H22 O2 DG DC 18 8 1.59 2 E F H22 O2 DG DC 18 8 1.57 2 A A OD1 HZ3 ASP LYS 32 47 1.58 2 E F O2 H22 DC DG 22 4 1.59 2 A D H3 OE1 MET GLU 1 21 1.60 3 C C HZ2 OD1 LYS ASP 9 11 1.53 3 B B OE1 HZ3 GLU LYS 35 46 1.58 3 E F H22 O2 DG DC 3 23 1.59 3 A D OE2 HZ1 GLU LYS 21 2 1.59 4 A A OE1 HZ3 GLU LYS 35 49 1.58 4 A B HZ1 OE1 LYS GLU 47 41 1.58 4 E F H22 O2 DG DC 3 23 1.58 4 A A HZ3 OE2 LYS GLU 2 21 1.59 4 C D HZ3 OE1 LYS GLU 47 41 1.59 4 A D HZ2 OE1 LYS GLU 2 21 1.59 4 A B HZ3 OE2 LYS GLU 46 41 1.59 5 B B OE1 HZ3 GLU LYS 35 46 1.57 5 E F O2 H22 DC DG 22 4 1.58 5 B B OE1 HZ1 GLU LYS 30 31 1.59 5 E F H22 O2 DG DC 18 8 1.60 6 C C OE1 HZ1 GLU LYS 35 46 1.54 6 A A OE1 HZ1 GLU LYS 30 31 1.58 6 A A OE1 HZ3 GLU LYS 35 46 1.58 6 A A OD2 HZ2 ASP LYS 32 47 1.59 6 C C OD2 HZ2 ASP LYS 39 42 1.59 6 A A O HG1 MET THR 52 53 1.59 6 E F H22 O2 DG DC 18 8 1.59 7 E F O2 H22 DC DG 23 3 1.57 7 E F O2 H22 DC DG 22 4 1.57 7 C C HZ1 OE1 LYS GLU 9 12 1.58 7 C D HZ1 OE1 LYS GLU 47 41 1.58 7 A A OE2 HZ1 GLU LYS 41 42 1.59 7 C D OE2 HZ1 GLU LYS 12 31 1.59 8 A A HZ1 OE2 LYS GLU 2 21 1.57 8 E F H22 O2 DG DC 3 23 1.57 8 C C OE1 HZ3 GLU LYS 30 31 1.58 8 E F O2 H22 DC DG 22 4 1.58 8 C C OE1 HZ3 GLU LYS 35 46 1.59 9 A B HH22 OD1 ARG ASP 15 11 1.53 9 A B OE1 HZ2 GLU LYS 41 47 1.59 9 E F O2 H22 DC DG 22 4 1.59 9 A A HZ2 OD1 LYS ASP 9 11 1.60 9 E F O2 H22 DC DG 23 3 1.60 9 E F H22 O2 DG DC 18 8 1.60 9 B B OD2 HZ2 ASP LYS 39 42 1.60 9 C C OE2 HZ1 GLU LYS 30 31 1.60 10 A A HZ2 HH LYS TYR 47 48 1.00 10 E F H22 O2 DG DC 18 8 1.59 10 B B OE1 HZ1 GLU LYS 35 46 1.60 10 B B HZ2 OD2 LYS ASP 9 11 1.60 1 2.20 0.30 108.30 110.50 F F F O4' C1' N9 DG DG DG 3 3 3 N 2 1.89 0.30 108.30 110.19 F F F O4' C1' N1 DC DC DC 9 9 9 N 3 2.11 0.30 108.30 110.41 F F F O4' C1' N9 DG DG DG 3 3 3 N 4 1.92 0.30 108.30 110.22 F F F O4' C1' N9 DG DG DG 3 3 3 N 4 2.13 0.30 108.30 110.43 F F F O4' C1' N9 DG DG DG 17 17 17 N 5 1.91 0.30 108.30 110.21 F F F O4' C1' N9 DG DG DG 3 3 3 N 6 1.95 0.30 108.30 110.25 F F F O4' C1' N9 DG DG DG 3 3 3 N 7 1.86 0.30 108.30 110.16 E E E O4' C1' N1 DC DC DC 22 22 22 N 7 1.87 0.30 108.30 110.17 F F F O4' C1' N9 DG DG DG 3 3 3 N 8 1.81 0.30 108.30 110.11 F F F O4' C1' N9 DA DA DA 14 14 14 N 8 2.18 0.30 108.30 110.48 F F F O4' C1' N9 DG DG DG 17 17 17 N 9 1.85 0.30 108.30 110.15 F F F O4' C1' N9 DA DA DA 10 10 10 N 9 1.87 0.30 108.30 110.17 F F F O4' C1' N9 DA DA DA 14 14 14 N 10 1.91 0.30 108.30 110.21 F F F O4' C1' N1 DT DT DT 6 6 6 N 10 1.94 0.30 108.30 110.24 F F F O4' C1' N9 DA DA DA 14 14 14 N 1 A VAL 10 -112.16 -157.77 1 A ARG 15 44.92 83.04 1 A GLU 30 -93.29 53.85 1 A ASP 32 -126.35 -164.72 1 A ASP 40 65.80 -83.86 1 A LYS 49 -160.05 81.51 1 A MET 52 -150.93 35.47 1 B LYS 2 -92.47 -156.55 1 B ILE 6 175.12 -66.21 1 B ASP 32 175.41 -57.25 1 B ASP 40 66.03 -79.44 1 B PRO 50 -60.80 -71.83 1 C THR 4 -59.55 103.13 1 C ASP 11 -98.34 -158.05 1 C LEU 13 -145.25 -105.66 1 C ASP 32 -78.04 -161.59 1 C ASP 40 69.68 -77.16 1 D SER 3 -86.58 45.83 1 D VAL 10 -84.40 -95.93 1 D LYS 31 -148.67 30.41 1 D ASP 32 -103.98 -158.90 1 D ASP 40 69.44 -86.16 2 A ASP 40 63.98 -97.03 2 A THR 53 -89.26 40.43 2 A CYS 54 67.62 87.34 2 B LYS 2 60.18 86.77 2 B PRO 19 -58.52 103.47 2 B ALA 29 -98.63 -70.00 2 B GLU 30 -160.18 14.39 2 B ASP 40 62.34 -99.98 2 B ASN 51 59.09 105.97 2 C LYS 2 -161.10 74.34 2 C SER 3 -86.15 45.89 2 C ASP 11 177.33 141.98 2 C GLU 12 -80.84 47.22 2 C LEU 13 -160.50 -61.32 2 C PRO 19 -33.91 125.14 2 C LEU 26 -72.45 -82.63 2 C ALA 29 -170.50 18.55 2 C ASP 32 -121.75 -79.08 2 C ASP 40 68.04 -74.73 2 C GLU 41 -132.75 -32.68 2 C LYS 47 -76.27 -78.43 2 C TYR 48 178.53 147.93 2 D VAL 10 -81.89 -76.09 2 D ASP 11 -179.20 -166.92 2 D VAL 16 -69.88 96.53 2 D ASP 40 64.99 -81.10 2 D GLU 41 -146.80 20.64 2 D LYS 47 -127.57 -72.13 2 D PRO 50 -69.54 -107.51 3 A ASP 11 -75.99 -169.52 3 A GLU 12 -71.98 36.73 3 A ASP 40 65.28 -93.51 3 A LYS 49 -161.80 63.56 3 A THR 53 -92.51 38.85 3 B GLU 12 179.12 -69.50 3 B LEU 13 -124.27 -96.28 3 B ASP 32 -129.62 -153.72 3 B ASP 40 71.63 -70.71 3 B GLU 41 -139.03 -30.95 3 C VAL 17 -69.37 88.06 3 C PRO 19 -62.92 99.73 3 C LEU 26 -113.54 -108.51 3 C ILE 28 -139.66 -73.60 3 C ASP 40 70.63 -80.75 3 C MET 52 -102.07 -68.59 3 C THR 53 -142.77 -71.33 3 C CYS 54 -136.51 -33.46 3 D SER 3 -79.33 37.09 3 D ASP 11 -111.39 -146.38 3 D GLU 12 -16.60 -72.71 3 D ASP 32 -109.18 -169.54 3 D ASP 40 64.84 -94.10 4 A THR 4 -85.62 45.67 4 A ILE 6 -164.00 -163.26 4 A VAL 16 -111.77 -163.28 4 A ALA 29 -100.73 -151.98 4 A GLU 30 -85.00 -71.04 4 A ASP 32 -170.57 -172.88 4 A ASP 40 66.69 -79.68 4 A GLU 41 -142.19 11.75 4 A THR 53 -140.39 28.31 4 A CYS 54 65.58 91.65 4 B LYS 2 -82.73 -154.37 4 B SER 3 -65.63 87.16 4 B THR 4 -114.88 78.57 4 B VAL 10 -75.41 -86.84 4 B LYS 31 -98.08 57.15 4 B ASP 32 -148.40 -58.82 4 B ASP 40 60.31 -88.68 4 B LYS 47 -68.65 -174.51 4 B ASN 51 62.73 -165.12 4 C SER 3 -97.97 43.33 4 C ASP 40 65.78 -80.89 4 C THR 53 -87.97 -77.38 4 D SER 3 -90.48 38.80 4 D THR 4 -96.81 38.06 4 D ASP 40 65.97 -84.27 5 A ASP 11 -76.70 -164.65 5 A GLU 12 -73.58 49.51 5 A ASP 40 66.04 -87.75 5 B GLU 12 -178.01 -63.70 5 B LEU 13 -116.40 -108.87 5 B LYS 31 -111.29 63.01 5 B ASP 40 66.03 -76.97 5 B GLU 41 -154.74 8.89 5 B LYS 46 -103.05 -157.54 5 C PRO 19 -68.26 91.20 5 C ASP 32 -161.31 -158.44 5 C ASP 40 72.90 -56.57 5 C GLU 41 -152.05 -43.99 5 D SER 3 -85.44 40.34 5 D LYS 31 -116.46 58.46 5 D ASP 32 -129.15 -157.35 5 D ASP 40 68.01 -81.91 6 A GLU 12 -78.70 23.58 6 A ASP 40 61.03 -90.78 6 A GLU 41 -155.87 25.07 6 A THR 53 57.02 -164.62 6 B THR 4 -96.10 57.34 6 B ARG 15 -150.46 88.30 6 B LYS 31 -142.77 24.02 6 B ASP 40 58.66 -95.89 6 B TYR 48 176.04 165.04 6 B CYS 54 -161.95 74.50 6 C LEU 26 -101.04 -81.17 6 C ASP 40 68.90 -93.23 6 C LYS 47 -88.70 -111.74 6 C CYS 54 -66.68 99.75 6 D THR 4 -87.10 42.42 6 D ASP 40 64.85 -87.56 6 D PRO 50 -58.13 -76.07 6 D CYS 54 69.25 132.67 7 A THR 4 -92.04 -97.20 7 A VAL 10 -107.62 -169.14 7 A GLU 30 -132.30 -61.65 7 A ASP 40 66.82 -85.34 7 A GLU 41 -142.94 22.13 7 A LYS 47 175.81 -171.28 7 A THR 53 -77.38 -74.36 7 B GLU 12 -78.12 48.11 7 B LEU 13 -165.17 -45.13 7 B PRO 19 -35.98 120.64 7 B THR 25 -92.01 -60.79 7 B ILE 28 -79.44 -162.97 7 B GLU 30 -133.85 -60.62 7 B ASP 32 -179.32 -176.82 7 B ASP 40 64.66 -84.29 7 B ASN 51 54.30 -158.56 7 C PRO 19 -37.83 142.47 7 C ASP 32 -146.58 -154.27 7 C ASP 40 68.19 -105.45 7 C ASN 51 -152.71 72.15 7 C MET 52 -150.94 21.97 7 D SER 3 -85.41 34.63 7 D VAL 10 -78.11 -92.87 7 D ALA 29 -123.54 -106.77 7 D GLU 30 -108.23 -73.31 7 D ASP 40 67.01 -82.42 7 D GLU 41 -146.31 34.75 8 A SER 3 -96.57 36.95 8 A GLU 12 -165.48 -26.50 8 A GLU 30 -79.94 -161.81 8 A ASP 40 69.58 -79.17 8 A GLU 41 -150.03 14.36 8 A LYS 47 -136.10 -45.61 8 A THR 53 -144.80 -41.21 8 A CYS 54 65.15 -90.86 8 B ASP 11 -118.37 -158.03 8 B PRO 19 -64.80 87.34 8 B LEU 26 -138.10 -74.90 8 B ASP 32 -95.05 -67.37 8 B ASP 40 67.21 -85.18 8 B LYS 49 -165.63 94.57 8 C PRO 19 -39.31 113.40 8 C ASP 32 -168.31 -157.98 8 C ASP 40 71.99 -64.44 8 C GLU 41 -150.87 -35.97 8 C PRO 50 -65.96 73.14 8 C CYS 54 73.88 -55.81 8 D SER 3 -79.68 40.27 8 D VAL 10 -94.27 -87.83 8 D ASP 11 179.99 -156.83 8 D PRO 19 -39.60 125.66 8 D ALA 29 -124.14 -167.93 8 D ASP 40 60.63 -94.20 8 D PRO 50 -47.93 -71.53 8 D ASN 51 51.88 -145.45 8 D MET 52 72.51 -40.85 8 D THR 53 72.83 152.06 9 A THR 4 -102.83 65.18 9 A ASP 11 -108.03 -168.09 9 A ASP 32 -111.41 -156.25 9 A ASP 40 62.38 -91.40 9 A THR 53 -133.55 -83.90 9 A CYS 54 71.41 -63.22 9 B LYS 2 56.44 -107.60 9 B ASP 11 -41.40 -71.40 9 B GLU 12 -163.88 -47.26 9 B LEU 13 -101.83 -78.09 9 B ASP 32 -165.68 -165.65 9 B ASP 40 70.84 -74.21 9 B LYS 46 -112.86 -152.98 9 B PRO 50 -53.13 -70.35 9 B ASN 51 51.48 -93.58 9 B MET 52 -142.08 18.06 9 B CYS 54 71.50 -44.66 9 C SER 3 -101.98 -74.40 9 C THR 4 49.29 70.74 9 C VAL 7 -104.97 78.16 9 C ASP 11 -166.44 -68.10 9 C GLU 12 171.99 -41.86 9 C LYS 31 -104.55 43.28 9 C ASP 40 67.61 -90.82 9 C PRO 50 -44.89 106.94 9 D THR 4 -95.20 37.15 9 D VAL 10 -105.26 -100.25 9 D ASP 40 61.43 -94.04 9 D THR 53 -103.74 -169.64 10 A ARG 8 -124.75 -153.76 10 A VAL 10 -68.20 -165.33 10 A LEU 13 -170.74 42.96 10 A ASP 40 64.61 -93.31 10 A LYS 47 -66.43 -71.99 10 A TYR 48 -172.67 -143.32 10 A THR 53 66.60 78.36 10 B SER 3 -147.19 -79.13 10 B THR 4 -121.99 -54.95 10 B ARG 15 -132.05 -155.67 10 B LEU 22 -60.58 -76.56 10 B GLU 30 -154.65 -69.48 10 B ASP 40 65.31 -88.33 10 B PRO 50 -75.22 49.36 10 C LYS 2 -167.05 100.15 10 C SER 3 -75.26 46.96 10 C ASP 11 -130.50 -150.80 10 C GLU 30 -95.86 -78.54 10 C ASP 32 -117.11 -155.74 10 C ASP 40 72.73 -75.21 10 C THR 53 -84.54 -150.49 10 C CYS 54 -69.67 91.41 10 D PRO 19 -40.21 151.21 10 D ILE 28 -114.40 -165.39 10 D ASP 40 61.94 -90.39 N-terminal domain of the Transition State Regulator AbrB bound to a DNA target (abrB8) DNA bound structure of the N-terminal domain of AbrB 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N A PRO 19 C PRO 19 HELX_P A GLY 27 C GLY 27 1 1 9 A LYS 49 C LYS 49 HELX_P A THR 53 C THR 53 5 2 5 B PRO 19 D PRO 19 HELX_P B LEU 26 D LEU 26 1 3 8 C PRO 19 E PRO 19 HELX_P C GLY 27 E GLY 27 1 4 9 D PRO 19 F PRO 19 HELX_P D GLY 27 F GLY 27 1 5 9 disulf 2.032 A CYS 54 C SG CYS 54 1_555 C CYS 54 E SG CYS 54 1_555 disulf 2.033 B CYS 54 D SG CYS 54 1_555 D CYS 54 F SG CYS 54 1_555 hydrog WATSON-CRICK E DA 1 A N1 DA 1 1_555 F DT 25 B N3 DT 25 1_555 hydrog WATSON-CRICK E DA 1 A N6 DA 1 1_555 F DT 25 B O4 DT 25 1_555 hydrog WATSON-CRICK E DT 2 A N3 DT 2 1_555 F DA 24 B N1 DA 24 1_555 hydrog WATSON-CRICK E DT 2 A O4 DT 2 1_555 F DA 24 B N6 DA 24 1_555 hydrog WATSON-CRICK E DG 3 A N1 DG 3 1_555 F DC 23 B N3 DC 23 1_555 hydrog WATSON-CRICK E DG 3 A N2 DG 3 1_555 F DC 23 B O2 DC 23 1_555 hydrog WATSON-CRICK E DG 3 A O6 DG 3 1_555 F DC 23 B N4 DC 23 1_555 hydrog WATSON-CRICK E DA 4 A N1 DA 4 1_555 F DT 22 B N3 DT 22 1_555 hydrog WATSON-CRICK E DA 4 A N6 DA 4 1_555 F DT 22 B O4 DT 22 1_555 hydrog WATSON-CRICK E DT 5 A N3 DT 5 1_555 F DA 21 B N1 DA 21 1_555 hydrog WATSON-CRICK E DT 5 A O4 DT 5 1_555 F DA 21 B N6 DA 21 1_555 hydrog WATSON-CRICK E DT 6 A N3 DT 6 1_555 F DA 20 B N1 DA 20 1_555 hydrog WATSON-CRICK E DT 6 A O4 DT 6 1_555 F DA 20 B N6 DA 20 1_555 hydrog WATSON-CRICK E DG 7 A N1 DG 7 1_555 F DC 19 B N3 DC 19 1_555 hydrog WATSON-CRICK E DG 7 A N2 DG 7 1_555 F DC 19 B O2 DC 19 1_555 hydrog WATSON-CRICK E DG 7 A O6 DG 7 1_555 F DC 19 B N4 DC 19 1_555 hydrog WATSON-CRICK E DA 8 A N1 DA 8 1_555 F DT 18 B N3 DT 18 1_555 hydrog WATSON-CRICK E DA 8 A N6 DA 8 1_555 F DT 18 B O4 DT 18 1_555 hydrog WATSON-CRICK E DC 9 A N3 DC 9 1_555 F DG 17 B N1 DG 17 1_555 hydrog WATSON-CRICK E DC 9 A N4 DC 9 1_555 F DG 17 B O6 DG 17 1_555 hydrog WATSON-CRICK E DC 9 A O2 DC 9 1_555 F DG 17 B N2 DG 17 1_555 hydrog WATSON-CRICK E DA 10 A N1 DA 10 1_555 F DT 16 B N3 DT 16 1_555 hydrog WATSON-CRICK E DA 10 A N6 DA 10 1_555 F DT 16 B O4 DT 16 1_555 hydrog WATSON-CRICK E DA 11 A N1 DA 11 1_555 F DT 15 B N3 DT 15 1_555 hydrog WATSON-CRICK E DA 11 A N6 DA 11 1_555 F DT 15 B O4 DT 15 1_555 hydrog WATSON-CRICK E DT 12 A N3 DT 12 1_555 F DA 14 B N1 DA 14 1_555 hydrog WATSON-CRICK E DT 12 A O4 DT 12 1_555 F DA 14 B N6 DA 14 1_555 hydrog WATSON-CRICK E DT 13 A N3 DT 13 1_555 F DA 13 B N1 DA 13 1_555 hydrog WATSON-CRICK E DT 13 A O4 DT 13 1_555 F DA 13 B N6 DA 13 1_555 hydrog WATSON-CRICK E DA 14 A N1 DA 14 1_555 F DT 12 B N3 DT 12 1_555 hydrog WATSON-CRICK E DA 14 A N6 DA 14 1_555 F DT 12 B O4 DT 12 1_555 hydrog WATSON-CRICK E DT 15 A N3 DT 15 1_555 F DA 11 B N1 DA 11 1_555 hydrog WATSON-CRICK E DT 15 A O4 DT 15 1_555 F DA 11 B N6 DA 11 1_555 hydrog WATSON-CRICK E DT 16 A N3 DT 16 1_555 F DA 10 B N1 DA 10 1_555 hydrog WATSON-CRICK E DT 16 A O4 DT 16 1_555 F DA 10 B N6 DA 10 1_555 hydrog WATSON-CRICK E DG 17 A N1 DG 17 1_555 F DC 9 B N3 DC 9 1_555 hydrog WATSON-CRICK E DG 17 A N2 DG 17 1_555 F DC 9 B O2 DC 9 1_555 hydrog WATSON-CRICK E DG 17 A O6 DG 17 1_555 F DC 9 B N4 DC 9 1_555 hydrog WATSON-CRICK E DG 18 A N1 DG 18 1_555 F DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK E DG 18 A N2 DG 18 1_555 F DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK E DG 18 A O6 DG 18 1_555 F DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK E DA 19 A N1 DA 19 1_555 F DT 7 B N3 DT 7 1_555 hydrog WATSON-CRICK E DA 19 A N6 DA 19 1_555 F DT 7 B O4 DT 7 1_555 hydrog WATSON-CRICK E DA 20 A N1 DA 20 1_555 F DT 6 B N3 DT 6 1_555 hydrog WATSON-CRICK E DA 20 A N6 DA 20 1_555 F DT 6 B O4 DT 6 1_555 hydrog WATSON-CRICK E DA 21 A N1 DA 21 1_555 F DT 5 B N3 DT 5 1_555 hydrog WATSON-CRICK E DA 21 A N6 DA 21 1_555 F DT 5 B O4 DT 5 1_555 hydrog WATSON-CRICK E DC 22 A N3 DC 22 1_555 F DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK E DC 22 A N4 DC 22 1_555 F DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK E DC 22 A O2 DC 22 1_555 F DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK E DC 23 A N3 DC 23 1_555 F DG 3 B N1 DG 3 1_555 hydrog WATSON-CRICK E DC 23 A N4 DC 23 1_555 F DG 3 B O6 DG 3 1_555 hydrog WATSON-CRICK E DC 23 A O2 DC 23 1_555 F DG 3 B N2 DG 3 1_555 hydrog WATSON-CRICK E DT 24 A N3 DT 24 1_555 F DA 2 B N1 DA 2 1_555 hydrog WATSON-CRICK E DT 24 A O4 DT 24 1_555 F DA 2 B N6 DA 2 1_555 hydrog WATSON-CRICK E DT 25 A N3 DT 25 1_555 F DA 1 B N1 DA 1 1_555 hydrog WATSON-CRICK E DT 25 A O4 DT 25 1_555 F DA 1 B N6 DA 1 1_555 TRANSCRIPTION/DNA AbrB, abrB8, DNA bound, Transition State Regulator, DNA binding protein, Activator, DNA-binding, Repressor, Sporulation, Transcription, Transcription regulation, TRANSCRIPTION-DNA COMPLEX 2K1N PDB 1 1 2K1N 2K1N PDB 2 1 2K1N A0A063X7Z2_BACIU UNP 3 1 A0A063X7Z2 MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQ 1 25 2K1N 1 25 2K1N E 1 1 25 1 25 2K1N 1 25 2K1N F 2 1 25 1 55 2K1N 1 55 A0A063X7Z2 A 3 1 55 1 55 2K1N 1 55 A0A063X7Z2 B 3 1 55 1 55 2K1N 1 55 A0A063X7Z2 C 3 1 55 1 55 2K1N 1 55 A0A063X7Z2 D 3 1 55 6 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 6 C ILE 6 A LYS 9 C LYS 9 B ALA 33 D ALA 33 B ASP 39 D ASP 39 B LYS 42 D LYS 42 B LYS 47 D LYS 47 A LYS 42 C LYS 42 A LYS 46 C LYS 46 A ALA 33 C ALA 33 A ASP 39 C ASP 39 B ILE 6 D ILE 6 B LYS 9 D LYS 9 C ILE 6 E ILE 6 C LYS 9 E LYS 9 D ALA 33 F ALA 33 D ASP 39 F ASP 39 D LYS 42 F LYS 42 D LYS 46 F LYS 46 C LYS 42 E LYS 42 C LYS 46 E LYS 46 C ALA 33 E ALA 33 C ASP 39 E ASP 39 D THR 4 F THR 4 D LYS 9 F LYS 9