0.010312 0.005954 0.000000 0.000000 0.011907 0.000000 0.000000 0.000000 0.008708 0.00000 0.00000 0.00000 Batuwangala, T. Shepherd, D. Gadola, S.D. Gibson, K.J.C. Zaccai, N.R. Besra, G.S. Cerundolo, V. Jones, E.Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 96.974 96.974 114.834 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C66 H126 O8 1047.702 GLUCOSE MONOMYCOLATE 6-O-[(23Z,33Z)-3-HYDROXY-2-OCTYLDOPENTACONTA-23,33-DIENOYL]-ALPHA-D-IDOPYRANOSE non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N C N 139 N C N 140 N C N 141 N C N 142 N C N 143 N C N 144 N C N 145 N C N 146 N C N 147 N C N 148 N C N 149 N C N 150 N C N 151 N C N 152 N C N 153 N C N 154 N C N 155 N C N 156 N C N 157 N C N 158 N C N 159 N C N 160 N C N 161 N C N 162 N C N 163 N C N 164 N C N 165 N C N 166 N C N 167 N C N 168 N C N 169 N C N 170 N C N 171 N C N 172 N C N 173 N C N 174 N C N 175 N C N 176 N C N 177 N C N 178 N C N 179 N C N 180 N C N 181 N C N 182 N C N 183 N C N 184 N C N 185 N C N 186 R C N 187 N O N 188 R C N 189 N C N 190 N C N 191 N C N 192 N C N 193 N C N 194 N C N 195 N C N 196 N C N 197 N C N 198 N O N 199 N O N 200 N C N 201 S C N 202 N O N 203 R C N 204 N O N 205 R C N 206 N O N 207 S C N 208 N O N 209 S C N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C Y 342 N C Y 343 N N Y 344 N C Y 345 N C Y 346 N N N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N O N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 S C N 366 N C N 367 N C N 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 N C N 388 N C N 389 N C N 390 N C N 391 N O N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N N N 406 S C N 407 N C N 408 N O N 409 N C N 410 N C N 411 N C N 412 N C N 413 N N N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C N 435 N C N 436 N S N 437 N C N 438 N O N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N N N 451 S C N 452 N C N 453 N O N 454 N C Y 455 N C Y 456 N C Y 457 N C Y 458 N C Y 459 N C Y 460 N C N 461 N O N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N N N 474 S C N 475 N C N 476 N O N 477 N C N 478 N C N 479 N C N 480 N O N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N N N 491 S C N 492 N C N 493 N O N 494 N C N 495 N O N 496 N O N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N N N 505 S C N 506 N C N 507 N O N 508 R C N 509 N O N 510 N C N 511 N O N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N N N 522 S C N 523 N C N 524 N O N 525 N C Y 526 N C Y 527 N C Y 528 N C Y 529 N N Y 530 N C Y 531 N C Y 532 N C Y 533 N C Y 534 N C N 535 N O N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N N N 549 S C N 550 N C N 551 N O N 552 N C Y 553 N C Y 554 N C Y 555 N C Y 556 N C Y 557 N C Y 558 N C N 559 N O N 560 N O N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N N N 573 S C N 574 N C N 575 N O N 576 N C N 577 N C N 578 N C N 579 N O N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 586 N H N 587 N H N 588 N H N 589 N H N 590 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 Z doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 Z doub N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing Y 340 N sing Y 341 N doub Y 342 N doub N 343 N sing Y 344 N sing N 345 N sing Y 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N doub N 444 N sing N 445 N sing N 446 N sing N 447 N sing Y 448 N doub Y 449 N sing Y 450 N sing N 451 N sing Y 452 N doub N 453 N sing Y 454 N doub N 455 N sing Y 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N doub N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N doub N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N doub N 513 N sing N 514 N sing N 515 N sing N 516 N sing Y 517 N doub Y 518 N sing Y 519 N sing N 520 N sing Y 521 N doub Y 522 N sing Y 523 N sing N 524 N sing Y 525 N sing Y 526 N doub N 527 N sing Y 528 N doub N 529 N sing Y 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N doub N 541 N sing N 542 N sing N 543 N sing N 544 N sing Y 545 N doub Y 546 N sing Y 547 N sing N 548 N sing Y 549 N doub N 550 N sing Y 551 N doub N 552 N sing Y 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N doub N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing US J Immunol. 0022-1767 172 2382 2388 10.4049/jimmunol.172.4.2382 14764708 The crystal structure of human CD1b with a bound bacterial glycolipid. 2004 10.2210/pdb1uqs/pdb pdb_00001uqs 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS CCD 2002-11-15 ADSC CCD SILICON CRYSTAL SINGLE WAVELENGTH M x-ray 1 1.01 1.0 ID14-4 ESRF 1.01 SYNCHROTRON ESRF BEAMLINE ID14-4 33088.215 T-CELL SURFACE GLYCOPROTEIN CD1B FRAGMENT: RESIDUES 18-295 1 man polymer 11879.356 BETA-2-MICROGLOBULIN 1 man polymer 1047.702 GLUCOSE MONOMYCOLATE 1 syn non-polymer 18.015 water 91 nat water CD1B ANTIGEN HDCMA22P no no MGSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGF AREVQDFAGDFQMKYPFEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMET VRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILP NANWTWYLRATLDVADGEAAGLSCRVKHSSLEGQDIILYWGPGSGGGLNDIFEAQKIEWH MGSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGF AREVQDFAGDFQMKYPFEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMET VRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILP NANWTWYLRATLDVADGEAAGLSCRVKHSSLEGQDIILYWGPGSGGGLNDIFEAQKIEWH A polypeptide(L) no no MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA CRVNHVTLSQPKIVKWDRDM MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA CRVNHVTLSQPKIVKWDRDM B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS 511693 ESCHERICHIA COLI BL21 PROKARYOTIC EXRESSION SYSTEM PET23D HUMAN sample 9606 HOMO SAPIENS 511693 ESCHERICHIA COLI BL21 PROKARYOTIC EXRESSION SYSTEM PET23D 2 3.5 67 WEISSENBERG METHOD 5.60 0.1M SODIUM CITRATE PH 5.6, 0.5M AMMONIUM SULFATE, 0.5M LITHIUM SULFATE citation citation_author pdbx_database_status chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_entry_details pdbx_modification_feature repository Initial release Version format compliance Version format compliance Data collection Database references Other Data collection Database references Refinement description Structure summary 1 0 2003-10-30 1 1 2011-05-08 1 2 2011-07-13 1 3 2019-10-09 1 4 2023-12-13 1 5 2024-11-20 _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.page_last _citation.pdbx_database_id_DOI _citation.title _citation_author.name _pdbx_database_status.status_code_sf _database_2.pdbx_DOI _database_2.pdbx_database_accession CD1B IN COMPLEX WITH GM2 GANGLIOSIDE CD1B IN COMPLEX WITH PHOPHATIDYLINOSITOL MHC CLASS I MOLECULE B*5301 COMPLEXED WITH PEPTIDETYPDINQML FROM GAG PROTEIN OF HIV2 MHC CLASS I MOLECULE B*3501 COMPLEXED WITH PEPTIDE VPLRPMTYFROM THE NEF PROTEIN (75- 82) OF HIV1 MHC CLASS I MOLECULE B5301 COMPLEXED WITH PEPTIDE LS6 (KPIVQYDNF) FROM THE MALARIA PARASITE P. FALCIPARUM HFE (HUMAN) HEMOCHROMATOSIS PROTEIN DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B 3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B 3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGRKKYKL - 3R MUTATION) ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKKYQL - 7Q MUTATION) ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKKYKL - INDEX PEPTIDE) ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKKYRL - 7R MUTATION) ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8 - HIV-1 GAG PEPTIDE (GGKKRYKL - 5R MUTATION) COMPLEX OF THE HUMAN MHC CLASS I GLYCOPROTEIN HLA-A2 ANDTHE T CELL CORECEPTOR CD8 COMPLEX BETWEEN HUMAN T-CELL RECEPTOR, VIRAL PEPTIDE (TAX), AND HLA-A 0201 CRYSTAL STRUCTURE OF HUMAN CLASS I MHC ( HLA-A2.1) COMPLEXED WITH BETA 2- MICROGLOBULIN AND HUMAN PEPTIDE P1049 MHC CLASS I H-2DB COMPLEXED WITH A SENDAI VIRUSNUCLEOPROTEIN PEPTIDE HEMOCHROMATOSIS PROTEIN HFE COMPLEXED WITH TRANSFERRINRECEPTOR NONSTANDARD PEPTIDE BINDING OF HLA-B*5101 COMPLEXED WITH HIV IMMUNODOMINANT EPITOPE KM1 (LPPVVAKEI) NONSTANDARD PEPTIDE BINDING OF HLA-B*5101 COMPLEXED WITH HIV IMMUNODOMINANT EPITOPE KM2 (TAFTIPSI) CRYSTAL STRUCTURE DETERMINATION OF HLA A2 COMPLEXED TOPEPTIDE GP2 WITH THE SUBSTITUTION (I2L/V5L/L9V) CRYSTAL STRUCTURE DETERMINATION OF HLA-A2.1 COMPLEXED TOGP2 PEPTIDE VARIANT(I2L/V5L) STRUCTURE OF A COMPLEX BETWEEN THE HUMAN NATURAL KILLER CELL RECEPTOR KIR2DL2 AND A CLASS I MHC LIGAND HLA-CW3 CRYSTAL STRUCTURE OF THE HUMAN MHC-RELATED FC RECEPTOR HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA -A 0201) COMPLEX WITH A NONAMERIC PEPTIDE FROM HIV-1 REVERSE TRANSCRIPTASE (RESIDUES 309-317) HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN A2 ( HLA-A2, HUMAN LEUCOCYTE ANTIGEN) HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN HLA- B(ASTERISK)2705 CLASS I HISTOCOMPATIBILITY ANTIGEN AW68.1 ( LEUCOCYTE ANTIGEN) CRYSTAL STRUCTURE OF HLA-A*0201/MAGE-A4- PEPTIDE COMPLEX CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDEP1058 CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDEP1049-5V CRYSTAL STRUCTURE OF CLASS I MHC A2 IN COMPLEX WITH PEPTIDEP1049-6V CRYSTAL STRUCTURE OF THE HUMAN CYTOMEGALOVIRUS PROTEIN US2BOUND TO THE MHC CLASS I MOLECULE HLA-A2/TAX CRYSTAL STRUCTURE OF THE HUMAN NATURAL KILLER CELLINHIBITORY RECEPTOR KIR2DL1 BOUND TO ITS MHC LIGAND HLA-CW4 CRYSTAL STRUCTURE OF HLA-A2*0201 IN COMPLEX WITH ADECAMERIC ALTERED PEPTIDE LIGAND FROM THE MART-1/MELAN-A HLA-B*2709 BOUND TO DECA-PEPTIDE S10R HLA-B*2705 BOUND TO NONA-PEPTIDE M9 CRYSTAL STRUCTURE OF HLA-A2*0201 IN COMPLEX WITH ANONAMERIC ALTERED PEPTIDE LIGAND (ALGIGILTV) FROM THE MART-1/MELAN-A. NMR SOLUTION STRUCTURE OF THE HUMAN BETA2- MICROGLOBULIN HLA-B*2709 BOUND TO NONA-PEPTIDE M9 THE HUMAN NON-CLASSICAL MAJOR HISTOCOMPATIBILITY COMPLEXMOLECULE HLA-E THE HUMAN NON-CLASSICAL MAJOR HISTOCOMPATIBILITY COMPLEXMOLECULE HLA-E CRYSTAL STRUCTURE OF MONOMERIC HUMAN BETA-2 -MICROGLOBULIN HLA B8 IN COMPLEX WITH AN EPSTEIN BARR VIRUS DETERMINANT CRYSTAL STRUCTURE OF HLA B*4402 IN COMPLEX WITH HLADPA*0201 PEPTIDE THE CRYSTAL STRUCTURE OF LC13 TCR IN COMPLEX WITH HLAB8-EBVPEPTIDE COMPLEX CRYSTAL STRUCTURE OF HLA-B*2709 COMPLEXED WITH THE VASOACTIVE INTESTINAL PEPTIDE TYPE 1 RECEPTOR (VPAC1) PEPTIDE (RESIDUES 400-408) A STRUCTURAL BASIS FOR IMMUNODOMINANT HUMAN T-CELL RECEPTOR RECOGNITION. CRYSTAL STRUCTURE OF HLA-B*2709 COMPLEXED WITH THE VASOACTIVE INTESTINAL PEPTIDE TYPE 1 RECEPTOR (VPAC1) PEPTIDE (RESIDUES 400-408) MHC CLASS I H-2DB COMPLEXED WITH GLYCOPEPTIDE K3G CRYSTAL STRUCTURE OF HLA-CW4, A LIGAND FOR THE KIR2D NATURAL KILLER CELL INHIBITORY RECEPTOR TRUNCATED HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN HLA-AW68 COMPLEXED WITH A DECAMERIC PEPTIDE (EVAPPEYHRK) HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA -A 0201) COMPLEXED WITH A DECAMERIC PEPTIDE FROM CALRETICULIN HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN AW 68.1 (HLA-AW 68.1, HUMAN LEUCOCYTE ANTIGEN) HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN A2. 1 (HLA-A2.1 HUMAN LEUCOCYTE ANTIGEN) SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. PDBE Y PDBE 2003-10-16 REL REL 1 A O HOH 2003 6.27 1 A O HOH 2004 9.14 1 A O HOH 2006 7.05 1 A O HOH 2007 7.56 1 A O HOH 2013 6.80 1 A O HOH 2014 7.68 1 A O HOH 2020 7.30 1 B O HOH 2005 7.98 1 B O HOH 2006 8.97 1 B O HOH 2012 6.17 GMM GLUCOSE MONOMYCOLATE HOH water Y 1GZQ PDB ENTRY 1GZQ PDB experimental model A CYS 102 Disulfide bridge SG A CYS 105 A CYS 166 SG A CYS 169 1_555 1_555 None A CYS 131 Disulfide bridge SG A CYS 134 A CYS 145 SG A CYS 148 1_555 1_555 None A CYS 206 Disulfide bridge SG A CYS 209 A CYS 261 SG A CYS 264 1_555 1_555 None B CYS 25 Disulfide bridge SG B CYS 26 B CYS 80 SG B CYS 81 1_555 1_555 None GMM 1283 3 GMM GMM 1283 A HOH 2001 4 HOH HOH 2001 A HOH 2002 4 HOH HOH 2002 A HOH 2003 4 HOH HOH 2003 A HOH 2004 4 HOH HOH 2004 A HOH 2005 4 HOH HOH 2005 A HOH 2006 4 HOH HOH 2006 A HOH 2007 4 HOH HOH 2007 A HOH 2008 4 HOH HOH 2008 A HOH 2009 4 HOH HOH 2009 A HOH 2010 4 HOH HOH 2010 A HOH 2011 4 HOH HOH 2011 A HOH 2012 4 HOH HOH 2012 A HOH 2013 4 HOH HOH 2013 A HOH 2014 4 HOH HOH 2014 A HOH 2015 4 HOH HOH 2015 A HOH 2016 4 HOH HOH 2016 A HOH 2017 4 HOH HOH 2017 A HOH 2018 4 HOH HOH 2018 A HOH 2019 4 HOH HOH 2019 A HOH 2020 4 HOH HOH 2020 A HOH 2021 4 HOH HOH 2021 A HOH 2022 4 HOH HOH 2022 A HOH 2023 4 HOH HOH 2023 A HOH 2024 4 HOH HOH 2024 A HOH 2025 4 HOH HOH 2025 A HOH 2026 4 HOH HOH 2026 A HOH 2027 4 HOH HOH 2027 A HOH 2028 4 HOH HOH 2028 A HOH 2029 4 HOH HOH 2029 A HOH 2030 4 HOH HOH 2030 A HOH 2031 4 HOH HOH 2031 A HOH 2032 4 HOH HOH 2032 A HOH 2033 4 HOH HOH 2033 A HOH 2034 4 HOH HOH 2034 A HOH 2035 4 HOH HOH 2035 A HOH 2036 4 HOH HOH 2036 A HOH 2037 4 HOH HOH 2037 A HOH 2038 4 HOH HOH 2038 A HOH 2039 4 HOH HOH 2039 A HOH 2040 4 HOH HOH 2040 A HOH 2041 4 HOH HOH 2041 A HOH 2042 4 HOH HOH 2042 A HOH 2043 4 HOH HOH 2043 A HOH 2044 4 HOH HOH 2044 A HOH 2045 4 HOH HOH 2045 A HOH 2046 4 HOH HOH 2046 A HOH 2047 4 HOH HOH 2047 A HOH 2048 4 HOH HOH 2048 A HOH 2049 4 HOH HOH 2049 A HOH 2050 4 HOH HOH 2050 A HOH 2051 4 HOH HOH 2051 A HOH 2001 4 HOH HOH 2001 B HOH 2002 4 HOH HOH 2002 B HOH 2003 4 HOH HOH 2003 B HOH 2004 4 HOH HOH 2004 B HOH 2005 4 HOH HOH 2005 B HOH 2006 4 HOH HOH 2006 B HOH 2007 4 HOH HOH 2007 B HOH 2008 4 HOH HOH 2008 B HOH 2009 4 HOH HOH 2009 B HOH 2010 4 HOH HOH 2010 B HOH 2011 4 HOH HOH 2011 B HOH 2012 4 HOH HOH 2012 B HOH 2013 4 HOH HOH 2013 B HOH 2014 4 HOH HOH 2014 B HOH 2015 4 HOH HOH 2015 B HOH 2016 4 HOH HOH 2016 B HOH 2017 4 HOH HOH 2017 B HOH 2018 4 HOH HOH 2018 B HOH 2019 4 HOH HOH 2019 B HOH 2020 4 HOH HOH 2020 B HOH 2021 4 HOH HOH 2021 B HOH 2022 4 HOH HOH 2022 B HOH 2023 4 HOH HOH 2023 B HOH 2024 4 HOH HOH 2024 B HOH 2025 4 HOH HOH 2025 B HOH 2026 4 HOH HOH 2026 B HOH 2027 4 HOH HOH 2027 B HOH 2028 4 HOH HOH 2028 B HOH 2029 4 HOH HOH 2029 B HOH 2030 4 HOH HOH 2030 B HOH 2031 4 HOH HOH 2031 B HOH 2032 4 HOH HOH 2032 B HOH 2033 4 HOH HOH 2033 B HOH 2034 4 HOH HOH 2034 B HOH 2035 4 HOH HOH 2035 B HOH 2036 4 HOH HOH 2036 B HOH 2037 4 HOH HOH 2037 B HOH 2038 4 HOH HOH 2038 B HOH 2039 4 HOH HOH 2039 B HOH 2040 4 HOH HOH 2040 B n 1 -2 A n 2 -1 A n 3 0 A n 4 1 A n 5 2 A ALA 3 n 6 ALA 3 A PHE 4 n 7 PHE 4 A GLN 5 n 8 GLN 5 A GLY 6 n 9 GLY 6 A PRO 7 n 10 PRO 7 A THR 8 n 11 THR 8 A SER 9 n 12 SER 9 A PHE 10 n 13 PHE 10 A HIS 11 n 14 HIS 11 A VAL 12 n 15 VAL 12 A ILE 13 n 16 ILE 13 A GLN 14 n 17 GLN 14 A THR 15 n 18 THR 15 A SER 16 n 19 SER 16 A SER 17 n 20 SER 17 A PHE 18 n 21 PHE 18 A THR 19 n 22 THR 19 A ASN 20 n 23 ASN 20 A SER 21 n 24 SER 21 A THR 22 n 25 THR 22 A TRP 23 n 26 TRP 23 A ALA 24 n 27 ALA 24 A GLN 25 n 28 GLN 25 A THR 26 n 29 THR 26 A GLN 27 n 30 GLN 27 A GLY 28 n 31 GLY 28 A SER 29 n 32 SER 29 A GLY 30 n 33 GLY 30 A TRP 31 n 34 TRP 31 A LEU 32 n 35 LEU 32 A ASP 33 n 36 ASP 33 A ASP 34 n 37 ASP 34 A LEU 35 n 38 LEU 35 A GLN 36 n 39 GLN 36 A ILE 37 n 40 ILE 37 A HIS 38 n 41 HIS 38 A GLY 39 n 42 GLY 39 A TRP 40 n 43 TRP 40 A ASP 41 n 44 ASP 41 A SER 42 n 45 SER 42 A ASP 43 n 46 ASP 43 A SER 44 n 47 SER 44 A GLY 45 n 48 GLY 45 A THR 46 n 49 THR 46 A ALA 47 n 50 ALA 47 A ILE 48 n 51 ILE 48 A PHE 49 n 52 PHE 49 A LEU 50 n 53 LEU 50 A LYS 51 n 54 LYS 51 A PRO 52 n 55 PRO 52 A TRP 53 n 56 TRP 53 A SER 54 n 57 SER 54 A LYS 55 n 58 LYS 55 A GLY 56 n 59 GLY 56 A ASN 57 n 60 ASN 57 A PHE 58 n 61 PHE 58 A SER 59 n 62 SER 59 A ASP 60 n 63 ASP 60 A LYS 61 n 64 LYS 61 A GLU 62 n 65 GLU 62 A VAL 63 n 66 VAL 63 A ALA 64 n 67 ALA 64 A GLU 65 n 68 GLU 65 A LEU 66 n 69 LEU 66 A GLU 67 n 70 GLU 67 A GLU 68 n 71 GLU 68 A ILE 69 n 72 ILE 69 A PHE 70 n 73 PHE 70 A ARG 71 n 74 ARG 71 A VAL 72 n 75 VAL 72 A TYR 73 n 76 TYR 73 A ILE 74 n 77 ILE 74 A PHE 75 n 78 PHE 75 A GLY 76 n 79 GLY 76 A PHE 77 n 80 PHE 77 A ALA 78 n 81 ALA 78 A ARG 79 n 82 ARG 79 A GLU 80 n 83 GLU 80 A VAL 81 n 84 VAL 81 A GLN 82 n 85 GLN 82 A ASP 83 n 86 ASP 83 A PHE 84 n 87 PHE 84 A ALA 85 n 88 ALA 85 A GLY 86 n 89 GLY 86 A ASP 87 n 90 ASP 87 A PHE 88 n 91 PHE 88 A GLN 89 n 92 GLN 89 A MET 90 n 93 MET 90 A LYS 91 n 94 LYS 91 A TYR 92 n 95 TYR 92 A PRO 93 n 96 PRO 93 A PHE 94 n 97 PHE 94 A GLU 95 n 98 GLU 95 A ILE 96 n 99 ILE 96 A GLN 97 n 100 GLN 97 A GLY 98 n 101 GLY 98 A ILE 99 n 102 ILE 99 A ALA 100 n 103 ALA 100 A GLY 101 n 104 GLY 101 A CYS 102 n 105 CYS 102 A GLU 103 n 106 GLU 103 A LEU 104 n 107 LEU 104 A HIS 105 n 108 HIS 105 A SER 106 n 109 SER 106 A GLY 107 n 110 GLY 107 A GLY 108 n 111 GLY 108 A ALA 109 n 112 ALA 109 A ILE 110 n 113 ILE 110 A VAL 111 n 114 VAL 111 A SER 112 n 115 SER 112 A PHE 113 n 116 PHE 113 A LEU 114 n 117 LEU 114 A ARG 115 n 118 ARG 115 A GLY 116 n 119 GLY 116 A ALA 117 n 120 ALA 117 A LEU 118 n 121 LEU 118 A GLY 119 n 122 GLY 119 A GLY 120 n 123 GLY 120 A LEU 121 n 124 LEU 121 A ASP 122 n 125 ASP 122 A PHE 123 n 126 PHE 123 A LEU 124 n 127 LEU 124 A SER 125 n 128 SER 125 A VAL 126 n 129 VAL 126 A LYS 127 n 130 LYS 127 A ASN 128 n 131 ASN 128 A ALA 129 n 132 ALA 129 A SER 130 n 133 SER 130 A CYS 131 n 134 CYS 131 A VAL 132 n 135 VAL 132 A PRO 133 n 136 PRO 133 A SER 134 n 137 SER 134 A PRO 135 n 138 PRO 135 A GLU 136 n 139 GLU 136 A GLY 137 n 140 GLY 137 A GLY 138 n 141 GLY 138 A SER 139 n 142 SER 139 A ARG 140 n 143 ARG 140 A ALA 141 n 144 ALA 141 A GLN 142 n 145 GLN 142 A LYS 143 n 146 LYS 143 A PHE 144 n 147 PHE 144 A CYS 145 n 148 CYS 145 A ALA 146 n 149 ALA 146 A LEU 147 n 150 LEU 147 A ILE 148 n 151 ILE 148 A ILE 149 n 152 ILE 149 A GLN 150 n 153 GLN 150 A TYR 151 n 154 TYR 151 A GLN 152 n 155 GLN 152 A GLY 153 n 156 GLY 153 A ILE 154 n 157 ILE 154 A MET 155 n 158 MET 155 A GLU 156 n 159 GLU 156 A THR 157 n 160 THR 157 A VAL 158 n 161 VAL 158 A ARG 159 n 162 ARG 159 A ILE 160 n 163 ILE 160 A LEU 161 n 164 LEU 161 A LEU 162 n 165 LEU 162 A TYR 163 n 166 TYR 163 A GLU 164 n 167 GLU 164 A THR 165 n 168 THR 165 A CYS 166 n 169 CYS 166 A PRO 167 n 170 PRO 167 A ARG 168 n 171 ARG 168 A TYR 169 n 172 TYR 169 A LEU 170 n 173 LEU 170 A LEU 171 n 174 LEU 171 A GLY 172 n 175 GLY 172 A VAL 173 n 176 VAL 173 A LEU 174 n 177 LEU 174 A ASN 175 n 178 ASN 175 A ALA 176 n 179 ALA 176 A GLY 177 n 180 GLY 177 A LYS 178 n 181 LYS 178 A ALA 179 n 182 ALA 179 A ASP 180 n 183 ASP 180 A LEU 181 n 184 LEU 181 A GLN 182 n 185 GLN 182 A ARG 183 n 186 ARG 183 A GLN 184 n 187 GLN 184 A VAL 185 n 188 VAL 185 A LYS 186 n 189 LYS 186 A PRO 187 n 190 PRO 187 A GLU 188 n 191 GLU 188 A ALA 189 n 192 ALA 189 A TRP 190 n 193 TRP 190 A LEU 191 n 194 LEU 191 A SER 192 n 195 SER 192 A SER 193 n 196 SER 193 A GLY 194 n 197 GLY 194 A PRO 195 n 198 PRO 195 A SER 196 n 199 SER 196 A PRO 197 n 200 PRO 197 A GLY 198 n 201 GLY 198 A PRO 199 n 202 PRO 199 A GLY 200 n 203 GLY 200 A ARG 201 n 204 ARG 201 A LEU 202 n 205 LEU 202 A GLN 203 n 206 GLN 203 A LEU 204 n 207 LEU 204 A VAL 205 n 208 VAL 205 A CYS 206 n 209 CYS 206 A HIS 207 n 210 HIS 207 A VAL 208 n 211 VAL 208 A SER 209 n 212 SER 209 A GLY 210 n 213 GLY 210 A PHE 211 n 214 PHE 211 A TYR 212 n 215 TYR 212 A PRO 213 n 216 PRO 213 A LYS 214 n 217 LYS 214 A PRO 215 n 218 PRO 215 A VAL 216 n 219 VAL 216 A TRP 217 n 220 TRP 217 A VAL 218 n 221 VAL 218 A MET 219 n 222 MET 219 A TRP 220 n 223 TRP 220 A MET 221 n 224 MET 221 A ARG 222 n 225 ARG 222 A GLY 223 n 226 GLY 223 A GLU 224 n 227 GLU 224 A GLN 225 n 228 GLN 225 A GLU 226 n 229 GLU 226 A GLN 227 n 230 GLN 227 A GLN 228 n 231 GLN 228 A GLY 229 n 232 GLY 229 A THR 230 n 233 THR 230 A GLN 231 n 234 GLN 231 A LEU 232 n 235 LEU 232 A GLY 233 n 236 GLY 233 A ASP 234 n 237 ASP 234 A ILE 235 n 238 ILE 235 A LEU 236 n 239 LEU 236 A PRO 237 n 240 PRO 237 A ASN 238 n 241 ASN 238 A ALA 239 n 242 ALA 239 A ASN 240 n 243 ASN 240 A TRP 241 n 244 TRP 241 A THR 242 n 245 THR 242 A TRP 243 n 246 TRP 243 A TYR 244 n 247 TYR 244 A LEU 245 n 248 LEU 245 A ARG 246 n 249 ARG 246 A ALA 247 n 250 ALA 247 A THR 248 n 251 THR 248 A LEU 249 n 252 LEU 249 A ASP 250 n 253 ASP 250 A VAL 251 n 254 VAL 251 A ALA 252 n 255 ALA 252 A ASP 253 n 256 ASP 253 A GLY 254 n 257 GLY 254 A GLU 255 n 258 GLU 255 A ALA 256 n 259 ALA 256 A ALA 257 n 260 ALA 257 A GLY 258 n 261 GLY 258 A LEU 259 n 262 LEU 259 A SER 260 n 263 SER 260 A CYS 261 n 264 CYS 261 A ARG 262 n 265 ARG 262 A VAL 263 n 266 VAL 263 A LYS 264 n 267 LYS 264 A HIS 265 n 268 HIS 265 A SER 266 n 269 SER 266 A SER 267 n 270 SER 267 A LEU 268 n 271 LEU 268 A GLU 269 n 272 GLU 269 A GLY 270 n 273 GLY 270 A GLN 271 n 274 GLN 271 A ASP 272 n 275 ASP 272 A ILE 273 n 276 ILE 273 A ILE 274 n 277 ILE 274 A LEU 275 n 278 LEU 275 A TYR 276 n 279 TYR 276 A TRP 277 n 280 TRP 277 A GLY 278 n 281 GLY 278 A PRO 279 n 282 PRO 279 A GLY 280 n 283 GLY 280 A SER 281 n 284 SER 281 A GLY 282 n 285 GLY 282 A GLY 283 n 286 GLY 283 A n 287 284 A n 288 285 A n 289 286 A n 290 287 A n 291 288 A n 292 289 A n 293 290 A n 294 291 A n 295 292 A n 296 293 A n 297 294 A n 298 295 A n 299 296 A n 300 297 A MET 0 n 1 MET 0 B ILE 1 n 2 ILE 1 B GLN 2 n 3 GLN 2 B ARG 3 n 4 ARG 3 B THR 4 n 5 THR 4 B PRO 5 n 6 PRO 5 B LYS 6 n 7 LYS 6 B ILE 7 n 8 ILE 7 B GLN 8 n 9 GLN 8 B VAL 9 n 10 VAL 9 B TYR 10 n 11 TYR 10 B SER 11 n 12 SER 11 B ARG 12 n 13 ARG 12 B HIS 13 n 14 HIS 13 B PRO 14 n 15 PRO 14 B ALA 15 n 16 ALA 15 B GLU 16 n 17 GLU 16 B ASN 17 n 18 ASN 17 B GLY 18 n 19 GLY 18 B LYS 19 n 20 LYS 19 B SER 20 n 21 SER 20 B ASN 21 n 22 ASN 21 B PHE 22 n 23 PHE 22 B LEU 23 n 24 LEU 23 B ASN 24 n 25 ASN 24 B CYS 25 n 26 CYS 25 B TYR 26 n 27 TYR 26 B VAL 27 n 28 VAL 27 B SER 28 n 29 SER 28 B GLY 29 n 30 GLY 29 B PHE 30 n 31 PHE 30 B HIS 31 n 32 HIS 31 B PRO 32 n 33 PRO 32 B SER 33 n 34 SER 33 B ASP 34 n 35 ASP 34 B ILE 35 n 36 ILE 35 B GLU 36 n 37 GLU 36 B VAL 37 n 38 VAL 37 B ASP 38 n 39 ASP 38 B LEU 39 n 40 LEU 39 B LEU 40 n 41 LEU 40 B LYS 41 n 42 LYS 41 B ASN 42 n 43 ASN 42 B GLY 43 n 44 GLY 43 B GLU 44 n 45 GLU 44 B ARG 45 n 46 ARG 45 B ILE 46 n 47 ILE 46 B GLU 47 n 48 GLU 47 B LYS 48 n 49 LYS 48 B VAL 49 n 50 VAL 49 B GLU 50 n 51 GLU 50 B HIS 51 n 52 HIS 51 B SER 52 n 53 SER 52 B ASP 53 n 54 ASP 53 B LEU 54 n 55 LEU 54 B SER 55 n 56 SER 55 B PHE 56 n 57 PHE 56 B SER 57 n 58 SER 57 B LYS 58 n 59 LYS 58 B ASP 59 n 60 ASP 59 B TRP 60 n 61 TRP 60 B SER 61 n 62 SER 61 B PHE 62 n 63 PHE 62 B TYR 63 n 64 TYR 63 B LEU 64 n 65 LEU 64 B LEU 65 n 66 LEU 65 B TYR 66 n 67 TYR 66 B TYR 67 n 68 TYR 67 B THR 68 n 69 THR 68 B GLU 69 n 70 GLU 69 B PHE 70 n 71 PHE 70 B THR 71 n 72 THR 71 B PRO 72 n 73 PRO 72 B THR 73 n 74 THR 73 B GLU 74 n 75 GLU 74 B LYS 75 n 76 LYS 75 B ASP 76 n 77 ASP 76 B GLU 77 n 78 GLU 77 B TYR 78 n 79 TYR 78 B ALA 79 n 80 ALA 79 B CYS 80 n 81 CYS 80 B ARG 81 n 82 ARG 81 B VAL 82 n 83 VAL 82 B ASN 83 n 84 ASN 83 B HIS 84 n 85 HIS 84 B VAL 85 n 86 VAL 85 B THR 86 n 87 THR 86 B LEU 87 n 88 LEU 87 B SER 88 n 89 SER 88 B GLN 89 n 90 GLN 89 B PRO 90 n 91 PRO 90 B LYS 91 n 92 LYS 91 B ILE 92 n 93 ILE 92 B VAL 93 n 94 VAL 93 B LYS 94 n 95 LYS 94 B TRP 95 n 96 TRP 95 B ASP 96 n 97 ASP 96 B ARG 97 n 98 ARG 97 B ASP 98 n 99 ASP 98 B MET 99 n 100 MET 99 B author_and_software_defined_assembly PQS 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 48 A N ILE 51 A O GLY 39 A O GLY 42 A N ILE 37 A N ILE 40 A O GLY 30 A O GLY 33 A N TRP 31 A N TRP 34 A O HIS 11 A O HIS 14 A N PHE 18 A N PHE 21 A O PHE 94 A O PHE 97 A N GLU 103 A N GLU 106 A O VAL 111 A O VAL 114 A N LEU 118 A N LEU 121 A O LEU 121 A O LEU 124 A N SER 125 A N SER 128 A O VAL 132 A O VAL 135 A N GLY 194 A N GLY 197 A O GLN 203 A O GLN 206 A N CYS 206 A N CYS 209 A O ALA 247 A O ALA 250 A N THR 248 A N THR 251 A O GLN 231 A O GLN 234 A N GLN 225 A N GLN 228 A O ARG 222 A O ARG 225 A N MET 221 A N MET 224 A O SER 260 A O SER 263 A N ASN 238 A N ASN 241 A O THR 242 A O THR 245 B N TYR 10 B N TYR 11 B O ASN 24 B O ASN 25 B N GLY 29 B N GLY 30 B O PHE 62 B O PHE 63 B N TYR 67 B N TYR 68 B O GLU 50 B O GLU 51 B N TYR 10 B N TYR 11 B O ASN 24 B O ASN 25 B N GLY 29 B N GLY 30 B O PHE 62 B O PHE 63 B N TYR 63 B N TYR 64 B O SER 55 B O SER 56 B N GLU 36 B N GLU 37 B O ASN 83 B O ASN 84 B N ALA 79 B N ALA 80 B O LEU 40 B O LEU 41 B N LYS 41 B N LYS 42 B O GLU 44 B O GLU 45 B N GLU 36 B N GLU 37 B O ASN 83 B O ASN 84 B N VAL 82 B N VAL 83 B O LYS 91 B O LYS 92 1 A CA GLY 283 A CA GLY 286 1 Y 1 A C GLY 283 A C GLY 286 1 Y 1 A O GLY 283 A O GLY 286 1 Y 1 A MET -2 A MET 1 1 Y 1 A GLY -1 A GLY 2 1 Y 1 A SER 0 A SER 3 1 Y 1 A GLU 1 A GLU 4 1 Y 1 A HIS 2 A HIS 5 1 Y 1 A GLY 284 A GLY 287 1 Y 1 A LEU 285 A LEU 288 1 Y 1 A ASN 286 A ASN 289 1 Y 1 A ASP 287 A ASP 290 1 Y 1 A ILE 288 A ILE 291 1 Y 1 A PHE 289 A PHE 292 1 Y 1 A GLU 290 A GLU 293 1 Y 1 A ALA 291 A ALA 294 1 Y 1 A GLN 292 A GLN 295 1 Y 1 A LYS 293 A LYS 296 1 Y 1 A ILE 294 A ILE 297 1 Y 1 A GLU 295 A GLU 298 1 Y 1 A TRP 296 A TRP 299 1 Y 1 A HIS 297 A HIS 300 1 Y 1 A A O O GLY HOH 108 2025 1.81 1 A A OD1 O ASP HOH 180 2036 2.03 1 A A O O HOH HOH 2008 2016 2.10 1 B HIS 31 45.87 1 B B HIS PRO 31 32 58.03 1 -20.22 2.10 128.40 108.18 A A A C N CD LYS PRO PRO 186 187 187 Y 1 -18.42 1.40 111.70 93.28 A A A CA N CD PRO PRO PRO 187 187 187 N 1 9.20 1.50 119.30 128.50 A A A C N CA GLY PRO PRO 194 195 195 Y 1 -22.78 2.10 120.10 97.32 B B B CA C O HIS HIS HIS 31 31 31 N 1 -15.95 1.90 121.10 105.15 B B B O C N HIS HIS PRO 31 31 32 Y 1 17.84 2.70 111.00 128.84 B B B N CA C ASP ASP ASP 38 38 38 N 1 9.81 1.50 119.30 129.11 B B B C N CA THR PRO PRO 71 72 72 Y 1 B B C O HIS HIS 31 31 0.210 0.019 1.229 1.439 N 1 A A O O HOH HOH 2025 2050 2.11 1_555 6_665 1 A GLN 5 74.90 95.70 1 A PRO 7 -56.29 170.30 1 A THR 8 -150.00 -1.63 1 A ASN 20 178.25 165.54 1 A SER 21 -26.53 -37.08 1 A ASP 33 56.68 -115.09 1 A SER 42 -64.86 -80.76 1 A THR 46 -81.85 -138.05 1 A TRP 53 -70.91 24.53 1 A ASN 57 51.74 15.44 1 A VAL 63 -51.41 -70.87 1 A ALA 64 -46.79 -18.11 1 A SER 106 45.69 25.13 1 A PHE 123 -144.09 -34.02 1 A ALA 129 48.72 82.51 1 A SER 130 175.39 131.30 1 A SER 139 -28.89 -58.14 1 A LEU 147 -52.41 3.78 1 A GLN 150 -71.13 28.93 1 A TYR 163 -121.81 -61.28 1 A GLU 164 -60.79 -76.07 1 A LEU 170 -47.16 -70.44 1 A ALA 176 -35.45 -24.80 1 A ALA 179 -42.26 -79.20 1 A ARG 183 -50.67 177.04 1 A PRO 187 -75.19 -150.62 1 A GLU 188 -161.80 -168.92 1 A ALA 189 161.61 146.10 1 A TRP 190 -173.73 118.29 1 A SER 192 178.79 149.79 1 A PRO 195 -11.39 91.22 1 A PRO 197 -62.70 -103.96 1 A PRO 199 -19.51 93.64 1 A VAL 208 -173.46 110.41 1 A PRO 213 -58.25 178.92 1 A VAL 218 -164.83 111.82 1 A GLN 228 59.68 -1.82 1 A ALA 239 -58.40 1.26 1 A TRP 241 79.76 54.71 1 A LEU 245 -169.53 112.10 1 A ALA 247 171.75 94.59 1 A ASP 253 -21.34 -63.74 1 A GLU 255 -42.34 -15.99 1 A ALA 256 -55.84 -74.00 1 A HIS 265 172.12 143.08 1 A GLU 269 64.22 70.28 1 A SER 281 -56.12 63.99 1 B ASN 21 -125.32 -167.66 1 B HIS 31 177.28 95.09 1 B ASP 38 -131.94 -37.45 1 B LEU 39 67.24 99.01 1 B GLU 47 -71.12 -99.67 1 B SER 52 -46.86 176.40 1 B ASP 59 -67.64 4.06 1 B TRP 60 83.02 2.42 1 B ASP 76 74.78 97.90 1 B PRO 90 -33.99 130.39 1 B ASP 96 -158.49 89.48 1 B ARG 97 -28.08 -34.23 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM LIPID_37.TOP LIPID_37.PARAM WATER_REP.TOP 87.0 4.68 15.28 0.00 4.68 0.00 -9.36 0.290 0.010 0.236 0.236 3.10 19.90 800 11687 6.8 100.0 RANDOM 1353771.84 1 GROUP THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1GZQ FLAT MODEL 28.6 0.194067 0.52 0.38 5.00 0.65 0.51 3.10 19.90 91 3176 74 0 3011 0.010 2.0 25.7 1.90 2.36 2.0 4.20 2.5 2.20 2.0 3.91 2.5 0.431 0.041 0.351 3.29 109 1812 6 5.7 100.0 3.100 20.000 1UQS 11697 1.000 0.07700 1 34.9000 12.800 99.9 0.60400 3.10 3.21 5.700 1 100.0 refinement CNS 1.1 data reduction DENZO data scaling SCALEPACK phasing EPMR The Crystal Structure of Human CD1b with a Bound Bacterial Glycolipid 1 N N 2 N N 3 N N 4 N N 4 N N A LYS 51 A LYS 54 HELX_P A LYS 55 A LYS 58 5 1 5 A SER 59 A SER 62 HELX_P A PHE 88 A PHE 91 1 2 30 A GLY 138 A GLY 141 HELX_P A GLN 150 A GLN 153 1 3 13 A TYR 151 A TYR 154 HELX_P A GLU 164 A GLU 167 1 4 14 A GLU 164 A GLU 167 HELX_P A GLY 177 A GLY 180 1 5 14 A GLY 177 A GLY 180 HELX_P A GLN 182 A GLN 185 1 6 6 disulf 2.031 A CYS 102 A SG CYS 105 1_555 A CYS 166 A SG CYS 169 1_555 disulf 2.031 A CYS 131 A SG CYS 134 1_555 A CYS 145 A SG CYS 148 1_555 disulf 2.030 A CYS 206 A SG CYS 209 1_555 A CYS 261 A SG CYS 264 1_555 disulf 2.023 B CYS 25 B SG CYS 26 1_555 B CYS 80 B SG CYS 81 1_555 GLYCOPROTEIN GLYCOPROTEIN, LIPID, GMM, CD1B, MHC, ANTIGEN PRESENTATION A TYR 92 A TYR 95 1 A PRO 93 A PRO 96 -0.14 A TYR 212 A TYR 215 1 A PRO 213 A PRO 216 -0.10 1UQS PDB 1 1UQS CD1B_HUMAN UNP 1 P29016 1UQS PDB 2 1UQS B2MG_HUMAN UNP 2 P01884 -2 -1 1UQS -2 -1 1UQS A 1 1 2 18 295 1UQS 0 277 P29016 A 2 3 280 278 297 1UQS 278 297 1UQS A 1 281 300 0 0 1UQS 0 0 1UQS B 3 1 1 21 119 1UQS 1 99 P01884 B 4 2 100 8 4 3 2 4 4 4 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 48 A ILE 51 A PHE 49 A PHE 52 A LEU 35 A LEU 38 A GLY 39 A GLY 42 A TRP 23 A TRP 26 A LEU 32 A LEU 35 A SER 9 A SER 12 A ASN 20 A ASN 23 A PHE 94 A PHE 97 A GLU 103 A GLU 106 A VAL 111 A VAL 114 A LEU 118 A LEU 121 A LEU 121 A LEU 124 A VAL 126 A VAL 129 A CYS 131 A CYS 134 A PRO 133 A PRO 136 A LEU 191 A LEU 194 A GLY 194 A GLY 197 A ARG 201 A ARG 204 A CYS 206 A CYS 209 A ALA 247 A ALA 250 A ALA 252 A ALA 255 A GLN 231 A GLN 234 A LEU 232 A LEU 235 A GLN 225 A GLN 228 A GLU 226 A GLU 229 A MET 219 A MET 222 A ARG 222 A ARG 225 A SER 260 A SER 263 A ARG 262 A ARG 265 A LEU 236 A LEU 239 A ASN 238 A ASN 241 A THR 242 A THR 245 A TYR 244 A TYR 247 B LYS 6 B LYS 7 B SER 11 B SER 12 B ASN 21 B ASN 22 B PHE 30 B PHE 31 B PHE 62 B PHE 63 B PHE 70 B PHE 71 B GLU 50 B GLU 51 B HIS 51 B HIS 52 B LYS 6 B LYS 7 B SER 11 B SER 12 B ASN 21 B ASN 22 B PHE 30 B PHE 31 B PHE 62 B PHE 63 B PHE 70 B PHE 71 B SER 55 B SER 56 B PHE 56 B PHE 57 B ILE 35 B ILE 36 B VAL 37 B VAL 38 B TYR 78 B TYR 79 B HIS 84 B HIS 85 B LEU 40 B LEU 41 B LYS 41 B LYS 42 B GLU 44 B GLU 45 B ARG 45 B ARG 46 B ILE 35 B ILE 36 B VAL 37 B VAL 38 B TYR 78 B TYR 79 B HIS 84 B HIS 85 B LYS 91 B LYS 92 B LYS 94 B LYS 95 BINDING SITE FOR RESIDUE GMM A1283 Software 17 A PHE 10 A PHE 13 17 1_555 A VAL 12 A VAL 15 17 1_555 A GLN 14 A GLN 17 17 1_555 A HIS 38 A HIS 41 17 1_555 A LEU 66 A LEU 69 17 1_555 A PHE 70 A PHE 73 17 1_555 A TYR 73 A TYR 76 17 1_555 A GLY 76 A GLY 79 17 1_555 A ARG 79 A ARG 82 17 1_555 A GLU 80 A GLU 83 17 1_555 A PHE 84 A PHE 87 17 1_555 A MET 90 A MET 93 17 1_555 A ILE 96 A ILE 99 17 1_555 A GLY 98 A GLY 101 17 1_555 A PHE 123 A PHE 126 17 1_555 A PHE 144 A PHE 147 17 1_555 A ILE 154 A ILE 157 17 1_555 152 P 31 2 1