data_4LTH
#
_entry.id 4LTH
#
_citation.id primary
_citation.title 'Controlled Dehydration of a Ruthenium Complex-DNA Crystal Induces Reversible DNA Kinking.'
_citation.journal_abbrev 'J. Am. Chem. Soc.'
_citation.journal_volume 136
_citation.page_first 17505
_citation.page_last 17512
_citation.year 2014
_citation.journal_id_ASTM JACSAT
_citation.country US
_citation.journal_id_ISSN 0002-7863
_citation.journal_id_CSD 0004
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 25393319
_citation.pdbx_database_id_DOI 10.1021/ja508745x
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Hall, J.P.' 1 ?
primary 'Sanchez-Weatherby, J.' 2 ?
primary 'Alberti, C.' 3 ?
primary 'Quimper, C.H.' 4 ?
primary
;O'Sullivan, K.
;
5 ?
primary 'Brazier, J.A.' 6 ?
primary 'Winter, G.' 7 ?
primary 'Sorensen, T.' 8 ?
primary 'Kelly, J.M.' 9 ?
primary 'Cardin, D.J.' 10 ?
primary 'Cardin, C.J.' 11 ?
#
_cell.entry_id 4LTH
_cell.length_a 42.980
_cell.length_b 42.980
_cell.length_c 39.420
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 4LTH
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn DNA 3045.992 1 ? ? ? ?
2 non-polymer syn 'Ru(tap)2(dppz) complex' 747.732 1 ? ? ? ?
3 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ?
4 water nat water 18.015 33 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DT)(DC)(DG)(DG)(DC)(DG)(DC)(DC)(DG)(DA)'
_entity_poly.pdbx_seq_one_letter_code_can TCGGCGCCGA
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DT n
1 2 DC n
1 3 DG n
1 4 DG n
1 5 DC n
1 6 DG n
1 7 DC n
1 8 DC n
1 9 DG n
1 10 DA n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'DNA synthesised by ATDBio'
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 4LTH
_struct_ref.pdbx_db_accession 4LTH
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code TCGGCGCCGA
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4LTH
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 10
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 4LTH
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 10
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 10
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
RKL non-polymer . 'Ru(tap)2(dppz) complex' ? 'C38 H22 N12 Ru 2' 747.732
#
_exptl.entry_id 4LTH
_exptl.method 'X-ray diffraction'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.99
_exptl_crystal.density_percent_sol 58.84
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.3
_exptl_crystal_grow.pdbx_details
'1ul 1mM d(TCGGCGCCGA)2, 1ul 4mM lambda-[Ru(TAP)2(dppz)]2+, 6ul 12mM spermine, 10% MPD, 40mM sodium cacodylate, 80mM KCl, 20mM BaCl2. Equilibriated against 1ml 35% MPD. Crystal was rehydrated to 97% relative humidity on the beamline using the HC1b., pH 6.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 298
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector Pixel
_diffrn_detector.type 'DECTRIS PILATUS 6M'
_diffrn_detector.pdbx_collection_date 2012-12-13
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'dual Si(111)'
_diffrn_radiation.pdbx_diffrn_protocol 'Single wavelength'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.8266
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source Synchrotron
_diffrn_source.type 'DIAMOND BEAMLINE I02'
_diffrn_source.pdbx_synchrotron_site Diamond
_diffrn_source.pdbx_synchrotron_beamline I02
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.8266
#
_reflns.entry_id 4LTH
_reflns.observed_criterion_sigma_I 2.7
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 30.39
_reflns.d_resolution_high 1.60
_reflns.number_obs 4564
_reflns.number_all 4564
_reflns.percent_possible_obs 88.6
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.60
_reflns_shell.d_res_low 1.64
_reflns_shell.percent_possible_all 91.3
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 4LTH
_refine.ls_number_reflns_obs 4341
_refine.ls_number_reflns_all 4341
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 30.39
_refine.ls_d_res_high 1.60
_refine.ls_percent_reflns_obs 87.07
_refine.ls_R_factor_obs 0.14646
_refine.ls_R_factor_all 0.14646
_refine.ls_R_factor_R_work 0.14516
_refine.ls_R_factor_R_free 0.17432
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.6
_refine.ls_number_reflns_R_free 210
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.969
_refine.correlation_coeff_Fo_to_Fc_free 0.966
_refine.B_iso_mean 29.108
_refine.aniso_B[1][1] -0.07
_refine.aniso_B[2][2] -0.07
_refine.aniso_B[3][3] 0.13
_refine.aniso_B[1][2] -0.00
_refine.aniso_B[1][3] -0.00
_refine.aniso_B[2][3] -0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model 'PDB ENTRY 3QRN'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.074
_refine.pdbx_overall_ESU_R_Free 0.076
_refine.overall_SU_ML 0.047
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 1.408
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-ray diffraction'
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-ray diffraction'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 202
_refine_hist.pdbx_number_atoms_ligand 52
_refine_hist.number_atoms_solvent 33
_refine_hist.number_atoms_total 287
_refine_hist.d_res_high 1.60
_refine_hist.d_res_low 30.39
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
'r_bond_refined_d' 0.017 0.013 ? 290 ? 'X-ray diffraction'
'r_bond_other_d' 0.002 0.020 ? 134 ? 'X-ray diffraction'
'r_angle_refined_deg' 2.995 1.598 ? 456 ? 'X-ray diffraction'
'r_angle_other_deg' 1.661 3.000 ? 308 ? 'X-ray diffraction'
'r_dihedral_angle_1_deg' ? ? ? ? ? 'X-ray diffraction'
'r_dihedral_angle_2_deg' ? ? ? ? ? 'X-ray diffraction'
'r_dihedral_angle_3_deg' ? ? ? ? ? 'X-ray diffraction'
'r_dihedral_angle_4_deg' ? ? ? ? ? 'X-ray diffraction'
'r_chiral_restr' 0.067 0.200 ? 30 ? 'X-ray diffraction'
'r_gen_planes_refined' 0.026 0.020 ? 176 ? 'X-ray diffraction'
'r_gen_planes_other' 0.003 0.020 ? 78 ? 'X-ray diffraction'
'r_nbd_refined' ? ? ? ? ? 'X-ray diffraction'
'r_nbd_other' ? ? ? ? ? 'X-ray diffraction'
'r_nbtor_refined' ? ? ? ? ? 'X-ray diffraction'
'r_nbtor_other' ? ? ? ? ? 'X-ray diffraction'
'r_xyhbond_nbd_refined' ? ? ? ? ? 'X-ray diffraction'
'r_xyhbond_nbd_other' ? ? ? ? ? 'X-ray diffraction'
'r_metal_ion_refined' ? ? ? ? ? 'X-ray diffraction'
'r_metal_ion_other' ? ? ? ? ? 'X-ray diffraction'
'r_symmetry_vdw_refined' ? ? ? ? ? 'X-ray diffraction'
'r_symmetry_vdw_other' ? ? ? ? ? 'X-ray diffraction'
'r_symmetry_hbond_refined' ? ? ? ? ? 'X-ray diffraction'
'r_symmetry_hbond_other' ? ? ? ? ? 'X-ray diffraction'
'r_symmetry_metal_ion_refined' ? ? ? ? ? 'X-ray diffraction'
'r_symmetry_metal_ion_other' ? ? ? ? ? 'X-ray diffraction'
'r_mcbond_it' ? ? ? ? ? 'X-ray diffraction'
'r_mcbond_other' ? ? ? ? ? 'X-ray diffraction'
'r_mcangle_it' ? ? ? ? ? 'X-ray diffraction'
'r_mcangle_other' ? ? ? ? ? 'X-ray diffraction'
'r_scbond_it' 2.803 2.829 ? 290 ? 'X-ray diffraction'
'r_scbond_other' 2.799 2.831 ? 291 ? 'X-ray diffraction'
'r_scangle_it' ? ? ? ? ? 'X-ray diffraction'
'r_scangle_other' 4.173 4.227 ? 457 ? 'X-ray diffraction'
'r_long_range_B_refined' 5.429 30.835 ? 644 ? 'X-ray diffraction'
'r_long_range_B_other' 5.359 30.748 ? 637 ? 'X-ray diffraction'
'r_rigid_bond_restr' ? ? ? ? ? 'X-ray diffraction'
'r_sphericity_free' ? ? ? ? ? 'X-ray diffraction'
'r_sphericity_bonded' ? ? ? ? ? 'X-ray diffraction'
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.600
_refine_ls_shell.d_res_low 1.642
_refine_ls_shell.number_reflns_R_work 319
_refine_ls_shell.R_factor_R_work 0.205
_refine_ls_shell.percent_reflns_obs 90.03
_refine_ls_shell.R_factor_R_free 0.206
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 15
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-ray diffraction'
#
_struct.entry_id 4LTH
_struct.title
'Dehydration/Rehydration of a Nucleic Acid system containing a Polypyridyl Ruthenium Complex at 97% relative humidity (3/7)'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4LTH
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Dehydration, HC1b, Kinking, ruthenium, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A DG 4 O6 ? ? ? 1_555 C BA . BA ? ? A DG 4 A BA 102 1_555 ? ? ? ? ? ? ? 2.892 ? ?
metalc2 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 102 A HOH 201 1_555 ? ? ? ? ? ? ? 2.897 ? ?
metalc3 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 102 A HOH 203 1_555 ? ? ? ? ? ? ? 2.958 ? ?
metalc4 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 102 A HOH 207 1_555 ? ? ? ? ? ? ? 2.817 ? ?
metalc5 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 102 A HOH 219 1_555 ? ? ? ? ? ? ? 2.888 ? ?
metalc6 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 102 A HOH 220 1_555 ? ? ? ? ? ? ? 2.763 ? ?
metalc7 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 102 A HOH 221 1_555 ? ? ? ? ? ? ? 2.867 ? ?
hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 3 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 5 A DG 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 5 A DG 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 5 A DG 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 6 A DC 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 6 A DC 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 6 A DC 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 8 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A RKL 101 ? 10 'BINDING SITE FOR RESIDUE RKL A 101'
AC2 Software A BA 102 ? 8 'BINDING SITE FOR RESIDUE BA A 102'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 10 DT A 1 ? DT A 1 . ? 7_555 ?
2 AC1 10 DC A 2 ? DC A 2 . ? 7_555 ?
3 AC1 10 DG A 3 ? DG A 3 . ? 5_444 ?
4 AC1 10 DG A 3 ? DG A 3 . ? 7_555 ?
5 AC1 10 DG A 4 ? DG A 4 . ? 5_444 ?
6 AC1 10 DC A 5 ? DC A 5 . ? 5_444 ?
7 AC1 10 DC A 7 ? DC A 7 . ? 3_444 ?
8 AC1 10 DC A 8 ? DC A 8 . ? 3_444 ?
9 AC1 10 DG A 9 ? DG A 9 . ? 1_555 ?
10 AC1 10 DA A 10 ? DA A 10 . ? 3_444 ?
11 AC2 8 DG A 3 ? DG A 3 . ? 1_555 ?
12 AC2 8 DG A 4 ? DG A 4 . ? 1_555 ?
13 AC2 8 HOH D . ? HOH A 201 . ? 1_555 ?
14 AC2 8 HOH D . ? HOH A 203 . ? 1_555 ?
15 AC2 8 HOH D . ? HOH A 207 . ? 1_555 ?
16 AC2 8 HOH D . ? HOH A 219 . ? 1_555 ?
17 AC2 8 HOH D . ? HOH A 220 . ? 1_555 ?
18 AC2 8 HOH D . ? HOH A 221 . ? 1_555 ?
#
_atom_sites.entry_id 4LTH
_atom_sites.fract_transf_matrix[1][1] 0.023267
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.023267
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.025368
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
BA
C
N
O
P
RU
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
_atom_site.pdbx_label_index
ATOM 1 O "O5'" . DT A 1 1 ? -18.667 -15.237 15.185 1.00 47.75 ? 1 DT A "O5'" 1 1
ATOM 2 C "C5'" . DT A 1 1 ? -20.067 -15.174 14.861 1.00 43.03 ? 1 DT A "C5'" 1 1
ATOM 3 C "C4'" . DT A 1 1 ? -20.342 -13.914 14.071 1.00 35.92 ? 1 DT A "C4'" 1 1
ATOM 4 O "O4'" . DT A 1 1 ? -20.127 -12.749 14.897 1.00 35.26 ? 1 DT A "O4'" 1 1
ATOM 5 C "C3'" . DT A 1 1 ? -19.432 -13.693 12.863 1.00 35.45 ? 1 DT A "C3'" 1 1
ATOM 6 O "O3'" . DT A 1 1 ? -19.996 -14.411 11.763 1.00 34.29 ? 1 DT A "O3'" 1 1
ATOM 7 C "C2'" . DT A 1 1 ? -19.507 -12.193 12.671 1.00 36.07 ? 1 DT A "C2'" 1 1
ATOM 8 C "C1'" . DT A 1 1 ? -19.756 -11.653 14.087 1.00 32.90 ? 1 DT A "C1'" 1 1
ATOM 9 N N1 . DT A 1 1 ? -18.583 -11.033 14.704 1.00 32.84 ? 1 DT A N1 1 1
ATOM 10 C C2 . DT A 1 1 ? -18.761 -9.949 15.541 1.00 32.51 ? 1 DT A C2 1 1
ATOM 11 O O2 . DT A 1 1 ? -19.843 -9.427 15.741 1.00 28.21 ? 1 DT A O2 1 1
ATOM 12 N N3 . DT A 1 1 ? -17.604 -9.449 16.080 1.00 33.13 ? 1 DT A N3 1 1
ATOM 13 C C4 . DT A 1 1 ? -16.321 -9.930 15.892 1.00 41.18 ? 1 DT A C4 1 1
ATOM 14 O O4 . DT A 1 1 ? -15.376 -9.372 16.433 1.00 43.81 ? 1 DT A O4 1 1
ATOM 15 C C5 . DT A 1 1 ? -16.209 -11.063 15.001 1.00 41.55 ? 1 DT A C5 1 1
ATOM 16 C C7 . DT A 1 1 ? -14.856 -11.636 14.721 1.00 48.34 ? 1 DT A C7 1 1
ATOM 17 C C6 . DT A 1 1 ? -17.333 -11.574 14.489 1.00 39.90 ? 1 DT A C6 1 1
ATOM 18 P P . DC A 1 2 ? -19.191 -14.601 10.355 1.00 36.65 ? 2 DC A P 1 2
ATOM 19 O OP1 . DC A 1 2 ? -19.885 -15.660 9.582 1.00 36.25 ? 2 DC A OP1 1 2
ATOM 20 O OP2 . DC A 1 2 ? -17.728 -14.627 10.630 1.00 36.65 ? 2 DC A OP2 1 2
ATOM 21 O "O5'" . DC A 1 2 ? -19.472 -13.225 9.585 1.00 30.60 ? 2 DC A "O5'" 1 2
ATOM 22 C "C5'" . DC A 1 2 ? -20.777 -12.819 9.215 1.00 29.17 ? 2 DC A "C5'" 1 2
ATOM 23 C "C4'" . DC A 1 2 ? -20.703 -11.600 8.330 1.00 24.47 ? 2 DC A "C4'" 1 2
ATOM 24 O "O4'" . DC A 1 2 ? -20.101 -10.518 9.050 1.00 27.26 ? 2 DC A "O4'" 1 2
ATOM 25 C "C3'" . DC A 1 2 ? -19.841 -11.787 7.091 1.00 21.79 ? 2 DC A "C3'" 1 2
ATOM 26 O "O3'" . DC A 1 2 ? -20.737 -12.269 6.103 1.00 26.39 ? 2 DC A "O3'" 1 2
ATOM 27 C "C2'" . DC A 1 2 ? -19.290 -10.411 6.813 1.00 23.00 ? 2 DC A "C2'" 1 2
ATOM 28 C "C1'" . DC A 1 2 ? -19.325 -9.719 8.175 1.00 25.54 ? 2 DC A "C1'" 1 2
ATOM 29 N N1 . DC A 1 2 ? -18.024 -9.546 8.821 1.00 23.97 ? 2 DC A N1 1 2
ATOM 30 C C2 . DC A 1 2 ? -17.666 -8.285 9.279 1.00 25.75 ? 2 DC A C2 1 2
ATOM 31 O O2 . DC A 1 2 ? -18.436 -7.333 9.073 1.00 26.06 ? 2 DC A O2 1 2
ATOM 32 N N3 . DC A 1 2 ? -16.493 -8.128 9.935 1.00 25.46 ? 2 DC A N3 1 2
ATOM 33 C C4 . DC A 1 2 ? -15.684 -9.179 10.122 1.00 24.12 ? 2 DC A C4 1 2
ATOM 34 N N4 . DC A 1 2 ? -14.544 -8.976 10.768 1.00 26.31 ? 2 DC A N4 1 2
ATOM 35 C C5 . DC A 1 2 ? -16.028 -10.478 9.668 1.00 22.70 ? 2 DC A C5 1 2
ATOM 36 C C6 . DC A 1 2 ? -17.196 -10.614 9.016 1.00 24.06 ? 2 DC A C6 1 2
ATOM 37 P P . DG A 1 3 ? -20.219 -12.624 4.611 1.00 28.02 ? 3 DG A P 1 3
ATOM 38 O OP1 . DG A 1 3 ? -21.283 -13.451 3.960 1.00 29.04 ? 3 DG A OP1 1 3
ATOM 39 O OP2 . DG A 1 3 ? -18.848 -13.163 4.674 1.00 26.31 ? 3 DG A OP2 1 3
ATOM 40 O "O5'" . DG A 1 3 ? -20.229 -11.231 3.877 1.00 25.31 ? 3 DG A "O5'" 1 3
ATOM 41 C "C5'" . DG A 1 3 ? -21.434 -10.557 3.512 1.00 24.47 ? 3 DG A "C5'" 1 3
ATOM 42 C "C4'" . DG A 1 3 ? -21.092 -9.187 3.005 1.00 24.19 ? 3 DG A "C4'" 1 3
ATOM 43 O "O4'" . DG A 1 3 ? -20.511 -8.441 4.096 1.00 25.02 ? 3 DG A "O4'" 1 3
ATOM 44 C "C3'" . DG A 1 3 ? -20.068 -9.143 1.874 1.00 23.31 ? 3 DG A "C3'" 1 3
ATOM 45 O "O3'" . DG A 1 3 ? -20.760 -9.146 0.622 1.00 27.48 ? 3 DG A "O3'" 1 3
ATOM 46 C "C2'" . DG A 1 3 ? -19.323 -7.851 2.119 1.00 22.58 ? 3 DG A "C2'" 1 3
ATOM 47 C "C1'" . DG A 1 3 ? -19.433 -7.635 3.623 1.00 22.82 ? 3 DG A "C1'" 1 3
ATOM 48 N N9 . DG A 1 3 ? -18.238 -8.009 4.355 1.00 21.99 ? 3 DG A N9 1 3
ATOM 49 C C8 . DG A 1 3 ? -17.514 -9.159 4.202 1.00 21.26 ? 3 DG A C8 1 3
ATOM 50 N N7 . DG A 1 3 ? -16.482 -9.225 4.994 1.00 21.67 ? 3 DG A N7 1 3
ATOM 51 C C5 . DG A 1 3 ? -16.543 -8.060 5.730 1.00 20.60 ? 3 DG A C5 1 3
ATOM 52 C C6 . DG A 1 3 ? -15.669 -7.552 6.719 1.00 21.93 ? 3 DG A C6 1 3
ATOM 53 O O6 . DG A 1 3 ? -14.660 -8.073 7.202 1.00 22.27 ? 3 DG A O6 1 3
ATOM 54 N N1 . DG A 1 3 ? -16.066 -6.295 7.153 1.00 21.50 ? 3 DG A N1 1 3
ATOM 55 C C2 . DG A 1 3 ? -17.138 -5.597 6.672 1.00 22.52 ? 3 DG A C2 1 3
ATOM 56 N N2 . DG A 1 3 ? -17.347 -4.388 7.219 1.00 21.97 ? 3 DG A N2 1 3
ATOM 57 N N3 . DG A 1 3 ? -17.965 -6.062 5.753 1.00 21.85 ? 3 DG A N3 1 3
ATOM 58 C C4 . DG A 1 3 ? -17.623 -7.296 5.346 1.00 20.52 ? 3 DG A C4 1 3
ATOM 59 P P . DG A 1 4 ? -20.097 -9.875 -0.662 1.00 32.17 ? 4 DG A P 1 4
ATOM 60 O OP1 . DG A 1 4 ? -21.106 -9.873 -1.745 1.00 41.01 ? 4 DG A OP1 1 4
ATOM 61 O OP2 . DG A 1 4 ? -19.344 -11.013 -0.274 1.00 30.67 ? 4 DG A OP2 1 4
ATOM 62 O "O5'" . DG A 1 4 ? -18.925 -8.898 -1.091 1.00 28.76 ? 4 DG A "O5'" 1 4
ATOM 63 C "C5'" . DG A 1 4 ? -19.278 -7.632 -1.640 1.00 28.30 ? 4 DG A "C5'" 1 4
ATOM 64 C "C4'" . DG A 1 4 ? -18.026 -6.901 -2.041 1.00 26.77 ? 4 DG A "C4'" 1 4
ATOM 65 O "O4'" . DG A 1 4 ? -17.144 -6.801 -0.881 1.00 26.98 ? 4 DG A "O4'" 1 4
ATOM 66 C "C3'" . DG A 1 4 ? -17.205 -7.606 -3.115 1.00 26.99 ? 4 DG A "C3'" 1 4
ATOM 67 O "O3'" . DG A 1 4 ? -16.666 -6.542 -3.872 1.00 30.26 ? 4 DG A "O3'" 1 4
ATOM 68 C "C2'" . DG A 1 4 ? -16.145 -8.327 -2.326 1.00 26.07 ? 4 DG A "C2'" 1 4
ATOM 69 C "C1'" . DG A 1 4 ? -15.894 -7.390 -1.153 1.00 25.80 ? 4 DG A "C1'" 1 4
ATOM 70 N N9 . DG A 1 4 ? -15.429 -8.019 0.069 1.00 23.06 ? 4 DG A N9 1 4
ATOM 71 C C8 . DG A 1 4 ? -15.877 -9.160 0.666 1.00 22.72 ? 4 DG A C8 1 4
ATOM 72 N N7 . DG A 1 4 ? -15.227 -9.458 1.754 1.00 21.79 ? 4 DG A N7 1 4
ATOM 73 C C5 . DG A 1 4 ? -14.335 -8.413 1.914 1.00 20.83 ? 4 DG A C5 1 4
ATOM 74 C C6 . DG A 1 4 ? -13.402 -8.149 2.947 1.00 19.84 ? 4 DG A C6 1 4
ATOM 75 O O6 . DG A 1 4 ? -13.168 -8.803 3.951 1.00 22.82 ? 4 DG A O6 1 4
ATOM 76 N N1 . DG A 1 4 ? -12.694 -6.986 2.712 1.00 20.22 ? 4 DG A N1 1 4
ATOM 77 C C2 . DG A 1 4 ? -12.913 -6.137 1.656 1.00 20.41 ? 4 DG A C2 1 4
ATOM 78 N N2 . DG A 1 4 ? -12.135 -5.050 1.594 1.00 21.29 ? 4 DG A N2 1 4
ATOM 79 N N3 . DG A 1 4 ? -13.785 -6.372 0.689 1.00 21.97 ? 4 DG A N3 1 4
ATOM 80 C C4 . DG A 1 4 ? -14.471 -7.502 0.897 1.00 22.52 ? 4 DG A C4 1 4
ATOM 81 P P . DC A 1 5 ? -16.098 -6.814 -5.302 1.00 37.41 ? 5 DC A P 1 5
ATOM 82 O OP1 . DC A 1 5 ? -17.045 -6.150 -6.248 1.00 43.89 ? 5 DC A OP1 1 5
ATOM 83 O OP2 . DC A 1 5 ? -15.685 -8.219 -5.432 1.00 41.35 ? 5 DC A OP2 1 5
ATOM 84 O "O5'" . DC A 1 5 ? -14.742 -5.973 -5.275 1.00 34.29 ? 5 DC A "O5'" 1 5
ATOM 85 C "C5'" . DC A 1 5 ? -14.743 -4.551 -5.093 1.00 31.97 ? 5 DC A "C5'" 1 5
ATOM 86 C "C4'" . DC A 1 5 ? -13.374 -4.125 -4.638 1.00 29.86 ? 5 DC A "C4'" 1 5
ATOM 87 O "O4'" . DC A 1 5 ? -13.166 -4.583 -3.291 1.00 29.17 ? 5 DC A "O4'" 1 5
ATOM 88 C "C3'" . DC A 1 5 ? -12.224 -4.716 -5.436 1.00 30.15 ? 5 DC A "C3'" 1 5
ATOM 89 O "O3'" . DC A 1 5 ? -11.867 -3.744 -6.395 1.00 28.25 ? 5 DC A "O3'" 1 5
ATOM 90 C "C2'" . DC A 1 5 ? -11.084 -4.727 -4.442 1.00 32.81 ? 5 DC A "C2'" 1 5
ATOM 91 C "C1'" . DC A 1 5 ? -11.774 -4.877 -3.099 1.00 33.33 ? 5 DC A "C1'" 1 5
ATOM 92 N N1 . DC A 1 5 ? -11.686 -6.182 -2.424 1.00 26.70 ? 5 DC A N1 1 5
ATOM 93 C C2 . DC A 1 5 ? -10.868 -6.276 -1.291 1.00 25.39 ? 5 DC A C2 1 5
ATOM 94 O O2 . DC A 1 5 ? -10.118 -5.321 -1.005 1.00 28.88 ? 5 DC A O2 1 5
ATOM 95 N N3 . DC A 1 5 ? -10.864 -7.424 -0.578 1.00 22.11 ? 5 DC A N3 1 5
ATOM 96 C C4 . DC A 1 5 ? -11.672 -8.421 -0.921 1.00 22.51 ? 5 DC A C4 1 5
ATOM 97 N N4 . DC A 1 5 ? -11.682 -9.510 -0.158 1.00 23.32 ? 5 DC A N4 1 5
ATOM 98 C C5 . DC A 1 5 ? -12.493 -8.361 -2.077 1.00 24.19 ? 5 DC A C5 1 5
ATOM 99 C C6 . DC A 1 5 ? -12.498 -7.219 -2.772 1.00 24.55 ? 5 DC A C6 1 5
ATOM 100 P P . DG A 1 6 ? -11.054 -4.138 -7.695 1.00 31.19 ? 6 DG A P 1 6
ATOM 101 O OP1 . DG A 1 6 ? -11.163 -2.975 -8.627 1.00 35.20 ? 6 DG A OP1 1 6
ATOM 102 O OP2 . DG A 1 6 ? -11.463 -5.526 -8.074 1.00 32.81 ? 6 DG A OP2 1 6
ATOM 103 O "O5'" . DG A 1 6 ? -9.590 -4.258 -7.140 1.00 29.70 ? 6 DG A "O5'" 1 6
ATOM 104 C "C5'" . DG A 1 6 ? -8.856 -3.179 -6.605 1.00 25.80 ? 6 DG A "C5'" 1 6
ATOM 105 C "C4'" . DG A 1 6 ? -7.468 -3.707 -6.373 1.00 30.09 ? 6 DG A "C4'" 1 6
ATOM 106 O "O4'" . DG A 1 6 ? -7.553 -4.636 -5.271 1.00 32.51 ? 6 DG A "O4'" 1 6
ATOM 107 C "C3'" . DG A 1 6 ? -6.847 -4.472 -7.548 1.00 30.94 ? 6 DG A "C3'" 1 6
ATOM 108 O "O3'" . DG A 1 6 ? -5.504 -4.057 -7.622 1.00 32.16 ? 6 DG A "O3'" 1 6
ATOM 109 C "C2'" . DG A 1 6 ? -6.939 -5.935 -7.150 1.00 28.88 ? 6 DG A "C2'" 1 6
ATOM 110 C "C1'" . DG A 1 6 ? -6.985 -5.892 -5.625 1.00 29.84 ? 6 DG A "C1'" 1 6
ATOM 111 N N9 . DG A 1 6 ? -7.822 -6.933 -5.037 1.00 27.79 ? 6 DG A N9 1 6
ATOM 112 C C8 . DG A 1 6 ? -8.988 -7.441 -5.554 1.00 27.80 ? 6 DG A C8 1 6
ATOM 113 N N7 . DG A 1 6 ? -9.487 -8.413 -4.839 1.00 25.75 ? 6 DG A N7 1 6
ATOM 114 C C5 . DG A 1 6 ? -8.634 -8.510 -3.750 1.00 23.44 ? 6 DG A C5 1 6
ATOM 115 C C6 . DG A 1 6 ? -8.648 -9.404 -2.643 1.00 24.06 ? 6 DG A C6 1 6
ATOM 116 O O6 . DG A 1 6 ? -9.462 -10.292 -2.368 1.00 23.51 ? 6 DG A O6 1 6
ATOM 117 N N1 . DG A 1 6 ? -7.541 -9.227 -1.830 1.00 26.13 ? 6 DG A N1 1 6
ATOM 118 C C2 . DG A 1 6 ? -6.556 -8.301 -2.029 1.00 28.03 ? 6 DG A C2 1 6
ATOM 119 N N2 . DG A 1 6 ? -5.613 -8.245 -1.085 1.00 30.62 ? 6 DG A N2 1 6
ATOM 120 N N3 . DG A 1 6 ? -6.527 -7.460 -3.052 1.00 27.54 ? 6 DG A N3 1 6
ATOM 121 C C4 . DG A 1 6 ? -7.600 -7.606 -3.857 1.00 27.55 ? 6 DG A C4 1 6
ATOM 122 P P . DC A 1 7 ? -4.550 -4.511 -8.839 1.00 38.23 ? 7 DC A P 1 7
ATOM 123 O OP1 . DC A 1 7 ? -3.551 -3.441 -8.998 1.00 41.62 ? 7 DC A OP1 1 7
ATOM 124 O OP2 . DC A 1 7 ? -5.321 -5.105 -9.933 1.00 35.89 ? 7 DC A OP2 1 7
ATOM 125 O "O5'" . DC A 1 7 ? -3.698 -5.710 -8.220 1.00 34.01 ? 7 DC A "O5'" 1 7
ATOM 126 C "C5'" . DC A 1 7 ? -2.855 -5.483 -7.075 1.00 29.76 ? 7 DC A "C5'" 1 7
ATOM 127 C "C4'" . DC A 1 7 ? -2.411 -6.811 -6.507 1.00 28.07 ? 7 DC A "C4'" 1 7
ATOM 128 O "O4'" . DC A 1 7 ? -3.532 -7.397 -5.823 1.00 29.69 ? 7 DC A "O4'" 1 7
ATOM 129 C "C3'" . DC A 1 7 ? -2.020 -7.863 -7.530 1.00 27.67 ? 7 DC A "C3'" 1 7
ATOM 130 O "O3'" . DC A 1 7 ? -0.660 -7.686 -7.892 1.00 29.15 ? 7 DC A "O3'" 1 7
ATOM 131 C "C2'" . DC A 1 7 ? -2.203 -9.152 -6.740 1.00 25.61 ? 7 DC A "C2'" 1 7
ATOM 132 C "C1'" . DC A 1 7 ? -3.277 -8.790 -5.688 1.00 27.91 ? 7 DC A "C1'" 1 7
ATOM 133 N N1 . DC A 1 7 ? -4.574 -9.470 -5.794 1.00 24.09 ? 7 DC A N1 1 7
ATOM 134 C C2 . DC A 1 7 ? -5.021 -10.305 -4.757 1.00 24.85 ? 7 DC A C2 1 7
ATOM 135 O O2 . DC A 1 7 ? -4.297 -10.476 -3.752 1.00 23.52 ? 7 DC A O2 1 7
ATOM 136 N N3 . DC A 1 7 ? -6.237 -10.884 -4.863 1.00 22.78 ? 7 DC A N3 1 7
ATOM 137 C C4 . DC A 1 7 ? -7.001 -10.647 -5.931 1.00 23.80 ? 7 DC A C4 1 7
ATOM 138 N N4 . DC A 1 7 ? -8.182 -11.258 -5.996 1.00 25.37 ? 7 DC A N4 1 7
ATOM 139 C C5 . DC A 1 7 ? -6.561 -9.813 -7.005 1.00 23.72 ? 7 DC A C5 1 7
ATOM 140 C C6 . DC A 1 7 ? -5.354 -9.259 -6.897 1.00 23.55 ? 7 DC A C6 1 7
ATOM 141 P P . DC A 1 8 ? -0.191 -7.935 -9.397 1.00 31.64 ? 8 DC A P 1 8
ATOM 142 O OP1 . DC A 1 8 ? 1.142 -7.404 -9.566 1.00 32.25 ? 8 DC A OP1 1 8
ATOM 143 O OP2 . DC A 1 8 ? -1.262 -7.581 -10.334 1.00 35.01 ? 8 DC A OP2 1 8
ATOM 144 O "O5'" . DC A 1 8 ? -0.164 -9.505 -9.548 1.00 28.79 ? 8 DC A "O5'" 1 8
ATOM 145 C "C5'" . DC A 1 8 ? 0.764 -10.295 -8.831 1.00 27.72 ? 8 DC A "C5'" 1 8
ATOM 146 C "C4'" . DC A 1 8 ? 0.497 -11.748 -9.136 1.00 28.55 ? 8 DC A "C4'" 1 8
ATOM 147 O "O4'" . DC A 1 8 ? -0.785 -12.130 -8.585 1.00 27.54 ? 8 DC A "O4'" 1 8
ATOM 148 C "C3'" . DC A 1 8 ? 0.426 -12.055 -10.629 1.00 29.81 ? 8 DC A "C3'" 1 8
ATOM 149 O "O3'" . DC A 1 8 ? 1.684 -12.698 -10.832 1.00 32.28 ? 8 DC A "O3'" 1 8
ATOM 150 C "C2'" . DC A 1 8 ? -0.751 -13.010 -10.782 1.00 29.60 ? 8 DC A "C2'" 1 8
ATOM 151 C "C1'" . DC A 1 8 ? -1.309 -13.195 -9.382 1.00 26.76 ? 8 DC A "C1'" 1 8
ATOM 152 N N1 . DC A 1 8 ? -2.757 -13.085 -9.340 1.00 23.08 ? 8 DC A N1 1 8
ATOM 153 C C2 . DC A 1 8 ? -3.518 -14.115 -8.769 1.00 23.01 ? 8 DC A C2 1 8
ATOM 154 O O2 . DC A 1 8 ? -2.956 -15.156 -8.413 1.00 23.38 ? 8 DC A O2 1 8
ATOM 155 N N3 . DC A 1 8 ? -4.848 -13.958 -8.639 1.00 21.83 ? 8 DC A N3 1 8
ATOM 156 C C4 . DC A 1 8 ? -5.434 -12.850 -9.105 1.00 23.79 ? 8 DC A C4 1 8
ATOM 157 N N4 . DC A 1 8 ? -6.750 -12.739 -8.961 1.00 24.30 ? 8 DC A N4 1 8
ATOM 158 C C5 . DC A 1 8 ? -4.678 -11.772 -9.659 1.00 23.70 ? 8 DC A C5 1 8
ATOM 159 C C6 . DC A 1 8 ? -3.362 -11.949 -9.788 1.00 22.59 ? 8 DC A C6 1 8
ATOM 160 P P . DG A 1 9 ? 2.290 -12.952 -12.305 1.00 37.38 ? 9 DG A P 1 9
ATOM 161 O OP1 . DG A 1 9 ? 3.735 -13.226 -12.119 1.00 40.81 ? 9 DG A OP1 1 9
ATOM 162 O OP2 . DG A 1 9 ? 1.709 -11.995 -13.239 1.00 37.35 ? 9 DG A OP2 1 9
ATOM 163 O "O5'" . DG A 1 9 ? 1.646 -14.318 -12.784 1.00 31.54 ? 9 DG A "O5'" 1 9
ATOM 164 C "C5'" . DG A 1 9 ? 1.972 -15.496 -12.073 1.00 30.05 ? 9 DG A "C5'" 1 9
ATOM 165 C "C4'" . DG A 1 9 ? 1.072 -16.580 -12.591 1.00 29.40 ? 9 DG A "C4'" 1 9
ATOM 166 O "O4'" . DG A 1 9 ? -0.304 -16.285 -12.242 1.00 30.20 ? 9 DG A "O4'" 1 9
ATOM 167 C "C3'" . DG A 1 9 ? 1.082 -16.671 -14.113 1.00 32.74 ? 9 DG A "C3'" 1 9
ATOM 168 O "O3'" . DG A 1 9 ? 0.837 -18.051 -14.371 1.00 43.06 ? 9 DG A "O3'" 1 9
ATOM 169 C "C2'" . DG A 1 9 ? -0.133 -15.862 -14.517 1.00 29.28 ? 9 DG A "C2'" 1 9
ATOM 170 C "C1'" . DG A 1 9 ? -1.082 -16.282 -13.427 1.00 28.31 ? 9 DG A "C1'" 1 9
ATOM 171 N N9 . DG A 1 9 ? -2.225 -15.412 -13.216 1.00 28.52 ? 9 DG A N9 1 9
ATOM 172 C C8 . DG A 1 9 ? -2.488 -14.179 -13.760 1.00 26.10 ? 9 DG A C8 1 9
ATOM 173 N N7 . DG A 1 9 ? -3.652 -13.700 -13.407 1.00 27.80 ? 9 DG A N7 1 9
ATOM 174 C C5 . DG A 1 9 ? -4.193 -14.689 -12.594 1.00 26.62 ? 9 DG A C5 1 9
ATOM 175 C C6 . DG A 1 9 ? -5.436 -14.748 -11.922 1.00 26.23 ? 9 DG A C6 1 9
ATOM 176 O O6 . DG A 1 9 ? -6.365 -13.928 -11.951 1.00 25.68 ? 9 DG A O6 1 9
ATOM 177 N N1 . DG A 1 9 ? -5.588 -15.951 -11.231 1.00 22.96 ? 9 DG A N1 1 9
ATOM 178 C C2 . DG A 1 9 ? -4.647 -16.943 -11.164 1.00 21.06 ? 9 DG A C2 1 9
ATOM 179 N N2 . DG A 1 9 ? -4.958 -18.019 -10.440 1.00 24.22 ? 9 DG A N2 1 9
ATOM 180 N N3 . DG A 1 9 ? -3.490 -16.904 -11.795 1.00 24.52 ? 9 DG A N3 1 9
ATOM 181 C C4 . DG A 1 9 ? -3.329 -15.756 -12.485 1.00 26.52 ? 9 DG A C4 1 9
ATOM 182 P P . DA A 1 10 ? 1.885 -18.951 -15.172 1.00 51.79 ? 10 DA A P 1 10
ATOM 183 O OP1 . DA A 1 10 ? 2.396 -18.156 -16.325 1.00 49.62 ? 10 DA A OP1 1 10
ATOM 184 O OP2 . DA A 1 10 ? 1.275 -20.322 -15.239 1.00 48.07 ? 10 DA A OP2 1 10
ATOM 185 O "O5'" . DA A 1 10 ? 3.239 -18.873 -14.339 1.00 43.46 ? 10 DA A "O5'" 1 10
ATOM 186 C "C5'" . DA A 1 10 ? 3.551 -19.907 -13.413 1.00 46.96 ? 10 DA A "C5'" 1 10
ATOM 187 C "C4'" . DA A 1 10 ? 4.767 -19.466 -12.646 1.00 47.67 ? 10 DA A "C4'" 1 10
ATOM 188 O "O4'" . DA A 1 10 ? 4.412 -18.274 -11.884 1.00 44.45 ? 10 DA A "O4'" 1 10
ATOM 189 C "C3'" . DA A 1 10 ? 5.262 -20.499 -11.632 1.00 51.19 ? 10 DA A "C3'" 1 10
ATOM 190 O "O3'" . DA A 1 10 ? 6.689 -20.383 -11.462 1.00 66.01 ? 10 DA A "O3'" 1 10
ATOM 191 C "C2'" . DA A 1 10 ? 4.541 -20.075 -10.371 1.00 45.87 ? 10 DA A "C2'" 1 10
ATOM 192 C "C1'" . DA A 1 10 ? 4.618 -18.553 -10.508 1.00 40.30 ? 10 DA A "C1'" 1 10
ATOM 193 N N9 . DA A 1 10 ? 3.617 -17.831 -9.728 1.00 34.53 ? 10 DA A N9 1 10
ATOM 194 C C8 . DA A 1 10 ? 2.381 -18.271 -9.330 1.00 35.79 ? 10 DA A C8 1 10
ATOM 195 N N7 . DA A 1 10 ? 1.725 -17.409 -8.597 1.00 29.08 ? 10 DA A N7 1 10
ATOM 196 C C5 . DA A 1 10 ? 2.596 -16.340 -8.486 1.00 26.44 ? 10 DA A C5 1 10
ATOM 197 C C6 . DA A 1 10 ? 2.503 -15.126 -7.810 1.00 27.28 ? 10 DA A C6 1 10
ATOM 198 N N6 . DA A 1 10 ? 1.429 -14.755 -7.129 1.00 26.51 ? 10 DA A N6 1 10
ATOM 199 N N1 . DA A 1 10 ? 3.526 -14.254 -7.936 1.00 29.45 ? 10 DA A N1 1 10
ATOM 200 C C2 . DA A 1 10 ? 4.594 -14.624 -8.647 1.00 32.58 ? 10 DA A C2 1 10
ATOM 201 N N3 . DA A 1 10 ? 4.807 -15.756 -9.314 1.00 33.33 ? 10 DA A N3 1 10
ATOM 202 C C4 . DA A 1 10 ? 3.759 -16.580 -9.189 1.00 32.52 ? 10 DA A C4 1 10
HETATM 203 RU RU . RKL B 2 . ? -6.315 -22.134 -11.975 1.00 23.96 ? 101 RKL A RU 1 101
HETATM 204 C C1 . RKL B 2 . ? -5.108 -20.116 -13.569 1.00 23.75 ? 101 RKL A C1 1 101
HETATM 205 N N1 . RKL B 2 . ? -7.075 -20.225 -12.247 1.00 24.13 ? 101 RKL A N1 1 101
HETATM 206 C C2 . RKL B 2 . ? -3.656 -21.955 -13.541 1.00 25.79 ? 101 RKL A C2 1 101
HETATM 207 N N2 . RKL B 2 . ? -4.844 -21.456 -13.232 1.00 25.09 ? 101 RKL A N2 1 101
HETATM 208 C C3 . RKL B 2 . ? -2.782 -21.284 -14.412 1.00 28.04 ? 101 RKL A C3 1 101
HETATM 209 N N3 . RKL B 2 . ? -3.667 -17.472 -15.611 1.00 28.51 ? 101 RKL A N3 1 101
HETATM 210 C C4 . RKL B 2 . ? -3.065 -19.992 -14.785 1.00 24.93 ? 101 RKL A C4 1 101
HETATM 211 N N4 . RKL B 2 . ? -6.145 -16.275 -14.836 1.00 28.90 ? 101 RKL A N4 1 101
HETATM 212 C C5 . RKL B 2 . ? -4.231 -19.400 -14.401 1.00 23.59 ? 101 RKL A C5 1 101
HETATM 213 N N5 . RKL B 2 . ? -5.332 -21.508 -10.306 1.00 25.02 ? 101 RKL A N5 1 101
HETATM 214 C C6 . RKL B 2 . ? -4.581 -18.089 -14.836 1.00 23.77 ? 101 RKL A C6 1 101
HETATM 215 N N6 . RKL B 2 . ? -4.448 -20.955 -7.696 1.00 25.91 ? 101 RKL A N6 1 101
HETATM 216 C C7 . RKL B 2 . ? -5.790 -17.531 -14.387 1.00 26.91 ? 101 RKL A C7 1 101
HETATM 217 N N7 . RKL B 2 . ? -9.424 -23.108 -8.459 1.00 25.43 ? 101 RKL A N7 1 101
HETATM 218 C C8 . RKL B 2 . ? -6.646 -18.246 -13.551 1.00 24.14 ? 101 RKL A C8 1 101
HETATM 219 N N8 . RKL B 2 . ? -7.723 -22.693 -10.723 1.00 24.06 ? 101 RKL A N8 1 101
HETATM 220 C C9 . RKL B 2 . ? -7.828 -17.770 -13.088 1.00 24.90 ? 101 RKL A C9 1 101
HETATM 221 N N9 . RKL B 2 . ? -7.306 -22.837 -13.582 1.00 21.69 ? 101 RKL A N9 1 101
HETATM 222 C C10 . RKL B 2 . ? -6.324 -19.566 -13.152 1.00 23.60 ? 101 RKL A C10 1 101
HETATM 223 N N10 . RKL B 2 . ? -8.564 -24.423 -15.598 1.00 21.05 ? 101 RKL A N10 1 101
HETATM 224 C C11 . RKL B 2 . ? -8.634 -18.497 -12.241 1.00 24.65 ? 101 RKL A C11 1 101
HETATM 225 N N11 . RKL B 2 . ? -4.972 -26.810 -12.256 1.00 22.29 ? 101 RKL A N11 1 101
HETATM 226 C C12 . RKL B 2 . ? -8.282 -19.796 -11.850 1.00 24.02 ? 101 RKL A C12 1 101
HETATM 227 N N12 . RKL B 2 . ? -5.543 -24.103 -11.807 1.00 22.80 ? 101 RKL A N12 1 101
HETATM 228 C C13 . RKL B 2 . ? -5.196 -15.668 -15.619 1.00 28.40 ? 101 RKL A C13 1 101
HETATM 229 C C14 . RKL B 2 . ? -5.517 -14.404 -16.096 1.00 32.93 ? 101 RKL A C14 1 101
HETATM 230 C C15 . RKL B 2 . ? -4.000 -16.250 -16.033 1.00 27.72 ? 101 RKL A C15 1 101
HETATM 231 C C16 . RKL B 2 . ? -3.093 -15.614 -16.886 1.00 31.21 ? 101 RKL A C16 1 101
HETATM 232 C C17 . RKL B 2 . ? -3.408 -14.342 -17.329 1.00 33.02 ? 101 RKL A C17 1 101
HETATM 233 C C18 . RKL B 2 . ? -4.607 -13.771 -16.942 1.00 33.51 ? 101 RKL A C18 1 101
HETATM 234 C C19 . RKL B 2 . ? -6.104 -21.777 -9.219 1.00 24.40 ? 101 RKL A C19 1 101
HETATM 235 C C20 . RKL B 2 . ? -4.087 -21.040 -10.093 1.00 29.60 ? 101 RKL A C20 1 101
HETATM 236 C C21 . RKL B 2 . ? -3.671 -20.717 -8.769 1.00 27.63 ? 101 RKL A C21 1 101
HETATM 237 C C22 . RKL B 2 . ? -5.669 -21.455 -7.875 1.00 25.96 ? 101 RKL A C22 1 101
HETATM 238 C C23 . RKL B 2 . ? -6.518 -21.690 -6.793 1.00 25.37 ? 101 RKL A C23 1 101
HETATM 239 C C24 . RKL B 2 . ? -7.747 -22.211 -6.992 1.00 26.69 ? 101 RKL A C24 1 101
HETATM 240 C C25 . RKL B 2 . ? -8.197 -22.572 -8.289 1.00 26.97 ? 101 RKL A C25 1 101
HETATM 241 C C26 . RKL B 2 . ? -7.354 -22.330 -9.402 1.00 23.34 ? 101 RKL A C26 1 101
HETATM 242 C C27 . RKL B 2 . ? -9.835 -23.434 -9.664 1.00 23.60 ? 101 RKL A C27 1 101
HETATM 243 C C28 . RKL B 2 . ? -8.978 -23.161 -10.791 1.00 22.70 ? 101 RKL A C28 1 101
HETATM 244 C C29 . RKL B 2 . ? -7.068 -24.188 -13.704 1.00 21.74 ? 101 RKL A C29 1 101
HETATM 245 C C30 . RKL B 2 . ? -8.247 -22.379 -14.447 1.00 23.50 ? 101 RKL A C30 1 101
HETATM 246 C C31 . RKL B 2 . ? -8.843 -23.166 -15.415 1.00 22.14 ? 101 RKL A C31 1 101
HETATM 247 C C32 . RKL B 2 . ? -7.703 -24.972 -14.730 1.00 22.15 ? 101 RKL A C32 1 101
HETATM 248 C C33 . RKL B 2 . ? -7.395 -26.320 -14.896 1.00 21.77 ? 101 RKL A C33 1 101
HETATM 249 C C34 . RKL B 2 . ? -6.499 -26.943 -14.040 1.00 20.31 ? 101 RKL A C34 1 101
HETATM 250 C C35 . RKL B 2 . ? -5.878 -26.208 -13.021 1.00 19.98 ? 101 RKL A C35 1 101
HETATM 251 C C36 . RKL B 2 . ? -6.145 -24.830 -12.829 1.00 21.64 ? 101 RKL A C36 1 101
HETATM 252 C C37 . RKL B 2 . ? -4.405 -26.132 -11.284 1.00 24.33 ? 101 RKL A C37 1 101
HETATM 253 C C38 . RKL B 2 . ? -4.667 -24.772 -11.036 1.00 24.45 ? 101 RKL A C38 1 101
HETATM 254 BA BA . BA C 3 . ? -14.576 -11.322 4.142 1.00 24.85 ? 102 BA A BA 1 102
HETATM 255 O O . HOH D 4 . ? -16.342 -12.583 6.061 1.00 28.60 ? 201 HOH A O 1 201
HETATM 256 O O . HOH D 4 . ? -5.341 -22.606 -16.398 1.00 26.23 ? 202 HOH A O 1 202
HETATM 257 O O . HOH D 4 . ? -17.113 -11.999 2.780 1.00 25.71 ? 203 HOH A O 1 203
HETATM 258 O O . HOH D 4 . ? -14.085 -11.513 -1.300 1.00 28.32 ? 204 HOH A O 1 204
HETATM 259 O O . HOH D 4 . ? -7.014 -25.525 -8.941 1.00 25.48 ? 205 HOH A O 1 205
HETATM 260 O O . HOH D 4 . ? -19.109 -3.743 4.394 1.00 38.31 ? 206 HOH A O 1 206
HETATM 261 O O . HOH D 4 . ? -14.135 -12.686 1.717 1.00 35.21 ? 207 HOH A O 1 207
HETATM 262 O O . HOH D 4 . ? -3.036 -8.938 -11.405 1.00 51.26 ? 208 HOH A O 1 208
HETATM 263 O O . HOH D 4 . ? -1.823 -18.849 -10.506 1.00 31.93 ? 209 HOH A O 1 209
HETATM 264 O O . HOH D 4 . ? -0.106 -12.251 -15.399 1.00 54.44 ? 210 HOH A O 1 210
HETATM 265 O O . HOH D 4 . ? -4.300 -11.037 -14.285 1.00 48.17 ? 211 HOH A O 1 211
HETATM 266 O O . HOH D 4 . ? -4.661 -24.672 -7.752 1.00 34.58 ? 212 HOH A O 1 212
HETATM 267 O O . HOH D 4 . ? -11.406 -23.081 -12.762 1.00 37.58 ? 213 HOH A O 1 213
HETATM 268 O O . HOH D 4 . ? -12.797 -11.387 10.857 1.00 50.58 ? 214 HOH A O 1 214
HETATM 269 O O . HOH D 4 . ? -6.693 -11.677 -13.179 1.00 47.09 ? 215 HOH A O 1 215
HETATM 270 O O . HOH D 4 . ? -11.728 -9.720 -5.721 1.00 35.05 ? 216 HOH A O 1 216
HETATM 271 O O . HOH D 4 . ? -3.174 -8.657 1.550 1.00 44.15 ? 217 HOH A O 1 217
HETATM 272 O O . HOH D 4 . ? -10.024 -10.621 -8.175 1.00 44.52 ? 218 HOH A O 1 218
HETATM 273 O O . HOH D 4 . ? -13.354 -13.780 5.038 1.00 40.26 ? 219 HOH A O 1 219
HETATM 274 O O . HOH D 4 . ? -13.772 -10.574 6.677 1.00 26.76 ? 220 HOH A O 1 220
HETATM 275 O O . HOH D 4 . ? -11.797 -11.517 3.464 1.00 29.04 ? 221 HOH A O 1 221
HETATM 276 O O . HOH D 4 . ? -0.148 -20.434 -11.927 1.00 45.32 ? 222 HOH A O 1 222
HETATM 277 O O . HOH D 4 . ? -16.004 -13.934 8.626 1.00 46.77 ? 223 HOH A O 1 223
HETATM 278 O O . HOH D 4 . ? -8.098 -10.522 -10.434 1.00 46.24 ? 224 HOH A O 1 224
HETATM 279 O O . HOH D 4 . ? -9.556 -7.505 -8.988 1.00 56.07 ? 225 HOH A O 1 225
HETATM 280 O O . HOH D 4 . ? -3.967 -23.783 -5.179 0.50 25.18 ? 226 HOH A O 1 226
HETATM 281 O O . HOH D 4 . ? -22.699 -5.704 3.350 1.00 45.90 ? 227 HOH A O 1 227
HETATM 282 O O . HOH D 4 . ? -5.361 -8.074 -9.990 1.00 51.06 ? 228 HOH A O 1 228
HETATM 283 O O . HOH D 4 . ? 4.194 -22.032 -16.575 1.00 54.26 ? 229 HOH A O 1 229
HETATM 284 O O . HOH D 4 . ? -8.844 -1.605 -9.897 1.00 53.27 ? 230 HOH A O 1 230
HETATM 285 O O . HOH D 4 . ? -16.864 -12.034 -1.102 1.00 60.88 ? 231 HOH A O 1 231
HETATM 286 O O . HOH D 4 . ? -3.170 -10.747 -18.797 1.00 57.11 ? 232 HOH A O 1 232
HETATM 287 O O . HOH D 4 . ? 7.846 -16.359 -10.915 1.00 62.20 ? 233 HOH A O 1 233
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DT 1 1 1 DT DT A . n
A 1 2 DC 2 2 2 DC DC A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 DG 4 4 4 DG DG A . n
A 1 5 DC 5 5 5 DC DC A . n
A 1 6 DG 6 6 6 DG DG A . n
A 1 7 DC 7 7 7 DC DC A . n
A 1 8 DC 8 8 8 DC DC A . n
A 1 9 DG 9 9 9 DG DG A . n
A 1 10 DA 10 10 10 DA DA A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RKL 1 101 11 RKL RKL A .
C 3 BA 1 102 12 BA BA A .
D 4 HOH 1 201 1 HOH HOH A .
D 4 HOH 2 202 2 HOH HOH A .
D 4 HOH 3 203 3 HOH HOH A .
D 4 HOH 4 204 4 HOH HOH A .
D 4 HOH 5 205 5 HOH HOH A .
D 4 HOH 6 206 6 HOH HOH A .
D 4 HOH 7 207 7 HOH HOH A .
D 4 HOH 8 208 8 HOH HOH A .
D 4 HOH 9 209 9 HOH HOH A .
D 4 HOH 10 210 10 HOH HOH A .
D 4 HOH 11 211 11 HOH HOH A .
D 4 HOH 12 212 13 HOH HOH A .
D 4 HOH 13 213 14 HOH HOH A .
D 4 HOH 14 214 16 HOH HOH A .
D 4 HOH 15 215 17 HOH HOH A .
D 4 HOH 16 216 18 HOH HOH A .
D 4 HOH 17 217 24 HOH HOH A .
D 4 HOH 18 218 25 HOH HOH A .
D 4 HOH 19 219 26 HOH HOH A .
D 4 HOH 20 220 27 HOH HOH A .
D 4 HOH 21 221 28 HOH HOH A .
D 4 HOH 22 222 29 HOH HOH A .
D 4 HOH 23 223 30 HOH HOH A .
D 4 HOH 24 224 31 HOH HOH A .
D 4 HOH 25 225 35 HOH HOH A .
D 4 HOH 26 226 37 HOH HOH A .
D 4 HOH 27 227 44 HOH HOH A .
D 4 HOH 28 228 45 HOH HOH A .
D 4 HOH 29 229 47 HOH HOH A .
D 4 HOH 30 230 48 HOH HOH A .
D 4 HOH 31 231 49 HOH HOH A .
D 4 HOH 32 232 50 HOH HOH A .
D 4 HOH 33 233 51 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1940 ?
1 MORE -26 ?
1 'SSA (A^2)' 4530 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 201 ? 1_555 136.0 ?
2 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 203 ? 1_555 125.9 ?
3 O ? D HOH . ? A HOH 201 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 203 ? 1_555 71.5 ?
4 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 207 ? 1_555 106.8 ?
5 O ? D HOH . ? A HOH 201 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 207 ? 1_555 117.1 ?
6 O ? D HOH . ? A HOH 203 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 207 ? 1_555 68.1 ?
7 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 219 ? 1_555 123.8 ?
8 O ? D HOH . ? A HOH 201 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 219 ? 1_555 71.5 ?
9 O ? D HOH . ? A HOH 203 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 219 ? 1_555 108.1 ?
10 O ? D HOH . ? A HOH 207 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 219 ? 1_555 77.8 ?
11 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 220 ? 1_555 71.5 ?
12 O ? D HOH . ? A HOH 201 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 220 ? 1_555 71.8 ?
13 O ? D HOH . ? A HOH 203 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 220 ? 1_555 137.2 ?
14 O ? D HOH . ? A HOH 207 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 220 ? 1_555 151.1 ?
15 O ? D HOH . ? A HOH 219 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 220 ? 1_555 79.8 ?
16 O6 ? A DG 4 ? A DG 4 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 221 ? 1_555 64.6 ?
17 O ? D HOH . ? A HOH 201 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 221 ? 1_555 135.9 ?
18 O ? D HOH . ? A HOH 203 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 221 ? 1_555 135.0 ?
19 O ? D HOH . ? A HOH 207 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 221 ? 1_555 67.2 ?
20 O ? D HOH . ? A HOH 219 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 221 ? 1_555 66.8 ?
21 O ? D HOH . ? A HOH 220 ? 1_555 BA ? C BA . ? A BA 102 ? 1_555 O ? D HOH . ? A HOH 221 ? 1_555 87.3 ?
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
GDA 'data collection' . ? 1
PHASER phasing . ? 2
REFMAC refinement 5.7.0032 ? 3
XDS 'data reduction' . ? 4
SCALA 'data scaling' . ? 5
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O5'" A DG 4 ? ? P A DG 4 ? ? OP2 A DG 4 ? ? 100.14 105.70 -5.56 0.90 N
2 1 "O5'" A DA 10 ? ? P A DA 10 ? ? OP1 A DA 10 ? ? 94.99 105.70 -10.71 0.90 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
BA BA BA N N 1
DA OP3 O N N 2
DA P P N N 3
DA OP1 O N N 4
DA OP2 O N N 5
DA "O5'" O N N 6
DA "C5'" C N N 7
DA "C4'" C N R 8
DA "O4'" O N N 9
DA "C3'" C N S 10
DA "O3'" O N N 11
DA "C2'" C N N 12
DA "C1'" C N R 13
DA N9 N Y N 14
DA C8 C Y N 15
DA N7 N Y N 16
DA C5 C Y N 17
DA C6 C Y N 18
DA N6 N N N 19
DA N1 N Y N 20
DA C2 C Y N 21
DA N3 N Y N 22
DA C4 C Y N 23
DA HOP3 H N N 24
DA HOP2 H N N 25
DA "H5'" H N N 26
DA "H5''" H N N 27
DA "H4'" H N N 28
DA "H3'" H N N 29
DA "HO3'" H N N 30
DA "H2'" H N N 31
DA "H2''" H N N 32
DA "H1'" H N N 33
DA H8 H N N 34
DA H61 H N N 35
DA H62 H N N 36
DA H2 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
DT OP3 O N N 109
DT P P N N 110
DT OP1 O N N 111
DT OP2 O N N 112
DT "O5'" O N N 113
DT "C5'" C N N 114
DT "C4'" C N R 115
DT "O4'" O N N 116
DT "C3'" C N S 117
DT "O3'" O N N 118
DT "C2'" C N N 119
DT "C1'" C N R 120
DT N1 N N N 121
DT C2 C N N 122
DT O2 O N N 123
DT N3 N N N 124
DT C4 C N N 125
DT O4 O N N 126
DT C5 C N N 127
DT C7 C N N 128
DT C6 C N N 129
DT HOP3 H N N 130
DT HOP2 H N N 131
DT "H5'" H N N 132
DT "H5''" H N N 133
DT "H4'" H N N 134
DT "H3'" H N N 135
DT "HO3'" H N N 136
DT "H2'" H N N 137
DT "H2''" H N N 138
DT "H1'" H N N 139
DT H3 H N N 140
DT H71 H N N 141
DT H72 H N N 142
DT H73 H N N 143
DT H6 H N N 144
HOH O O N N 145
HOH H1 H N N 146
HOH H2 H N N 147
RKL RU RU N N 148
RKL C1 C Y N 149
RKL N1 N Y N 150
RKL C2 C Y N 151
RKL N2 N Y N 152
RKL C3 C Y N 153
RKL N3 N Y N 154
RKL C4 C Y N 155
RKL N4 N Y N 156
RKL C5 C Y N 157
RKL N5 N Y N 158
RKL C6 C Y N 159
RKL N6 N Y N 160
RKL C7 C Y N 161
RKL N7 N Y N 162
RKL C8 C Y N 163
RKL N8 N Y N 164
RKL C9 C Y N 165
RKL N9 N Y N 166
RKL C10 C Y N 167
RKL N10 N Y N 168
RKL C11 C Y N 169
RKL N11 N Y N 170
RKL C12 C Y N 171
RKL N12 N Y N 172
RKL C13 C Y N 173
RKL C14 C Y N 174
RKL C15 C Y N 175
RKL C16 C Y N 176
RKL C17 C Y N 177
RKL C18 C Y N 178
RKL C19 C Y N 179
RKL C20 C Y N 180
RKL C21 C Y N 181
RKL C22 C Y N 182
RKL C23 C Y N 183
RKL C24 C Y N 184
RKL C25 C Y N 185
RKL C26 C Y N 186
RKL C27 C Y N 187
RKL C28 C Y N 188
RKL C29 C Y N 189
RKL C30 C Y N 190
RKL C31 C Y N 191
RKL C32 C Y N 192
RKL C33 C Y N 193
RKL C34 C Y N 194
RKL C35 C Y N 195
RKL C36 C Y N 196
RKL C37 C Y N 197
RKL C38 C Y N 198
RKL H2 H N N 199
RKL H3 H N N 200
RKL H4 H N N 201
RKL H9 H N N 202
RKL H11 H N N 203
RKL H12 H N N 204
RKL H14 H N N 205
RKL H16 H N N 206
RKL H17 H N N 207
RKL H18 H N N 208
RKL H20 H N N 209
RKL H21 H N N 210
RKL H23 H N N 211
RKL H24 H N N 212
RKL H27 H N N 213
RKL H28 H N N 214
RKL H30 H N N 215
RKL H31 H N N 216
RKL H33 H N N 217
RKL H34 H N N 218
RKL H37 H N N 219
RKL H38 H N N 220
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P SING N N 1
DA OP3 HOP3 SING N N 2
DA P OP1 DOUB N N 3
DA P OP2 SING N N 4
DA P "O5'" SING N N 5
DA OP2 HOP2 SING N N 6
DA "O5'" "C5'" SING N N 7
DA "C5'" "C4'" SING N N 8
DA "C5'" "H5'" SING N N 9
DA "C5'" "H5''" SING N N 10
DA "C4'" "O4'" SING N N 11
DA "C4'" "C3'" SING N N 12
DA "C4'" "H4'" SING N N 13
DA "O4'" "C1'" SING N N 14
DA "C3'" "O3'" SING N N 15
DA "C3'" "C2'" SING N N 16
DA "C3'" "H3'" SING N N 17
DA "O3'" "HO3'" SING N N 18
DA "C2'" "C1'" SING N N 19
DA "C2'" "H2'" SING N N 20
DA "C2'" "H2''" SING N N 21
DA "C1'" N9 SING N N 22
DA "C1'" "H1'" SING N N 23
DA N9 C8 SING Y N 24
DA N9 C4 SING Y N 25
DA C8 N7 DOUB Y N 26
DA C8 H8 SING N N 27
DA N7 C5 SING Y N 28
DA C5 C6 SING Y N 29
DA C5 C4 DOUB Y N 30
DA C6 N6 SING N N 31
DA C6 N1 DOUB Y N 32
DA N6 H61 SING N N 33
DA N6 H62 SING N N 34
DA N1 C2 SING Y N 35
DA C2 N3 DOUB Y N 36
DA C2 H2 SING N N 37
DA N3 C4 SING Y N 38
DC OP3 P SING N N 1
DC OP3 HOP3 SING N N 2
DC P OP1 DOUB N N 3
DC P OP2 SING N N 4
DC P "O5'" SING N N 5
DC OP2 HOP2 SING N N 6
DC "O5'" "C5'" SING N N 7
DC "C5'" "C4'" SING N N 8
DC "C5'" "H5'" SING N N 9
DC "C5'" "H5''" SING N N 10
DC "C4'" "O4'" SING N N 11
DC "C4'" "C3'" SING N N 12
DC "C4'" "H4'" SING N N 13
DC "O4'" "C1'" SING N N 14
DC "C3'" "O3'" SING N N 15
DC "C3'" "C2'" SING N N 16
DC "C3'" "H3'" SING N N 17
DC "O3'" "HO3'" SING N N 18
DC "C2'" "C1'" SING N N 19
DC "C2'" "H2'" SING N N 20
DC "C2'" "H2''" SING N N 21
DC "C1'" N1 SING N N 22
DC "C1'" "H1'" SING N N 23
DC N1 C2 SING N N 24
DC N1 C6 SING N N 25
DC C2 O2 DOUB N N 26
DC C2 N3 SING N N 27
DC N3 C4 DOUB N N 28
DC C4 N4 SING N N 29
DC C4 C5 SING N N 30
DC N4 H41 SING N N 31
DC N4 H42 SING N N 32
DC C5 C6 DOUB N N 33
DC C5 H5 SING N N 34
DC C6 H6 SING N N 35
DG OP3 P SING N N 1
DG OP3 HOP3 SING N N 2
DG P OP1 DOUB N N 3
DG P OP2 SING N N 4
DG P "O5'" SING N N 5
DG OP2 HOP2 SING N N 6
DG "O5'" "C5'" SING N N 7
DG "C5'" "C4'" SING N N 8
DG "C5'" "H5'" SING N N 9
DG "C5'" "H5''" SING N N 10
DG "C4'" "O4'" SING N N 11
DG "C4'" "C3'" SING N N 12
DG "C4'" "H4'" SING N N 13
DG "O4'" "C1'" SING N N 14
DG "C3'" "O3'" SING N N 15
DG "C3'" "C2'" SING N N 16
DG "C3'" "H3'" SING N N 17
DG "O3'" "HO3'" SING N N 18
DG "C2'" "C1'" SING N N 19
DG "C2'" "H2'" SING N N 20
DG "C2'" "H2''" SING N N 21
DG "C1'" N9 SING N N 22
DG "C1'" "H1'" SING N N 23
DG N9 C8 SING Y N 24
DG N9 C4 SING Y N 25
DG C8 N7 DOUB Y N 26
DG C8 H8 SING N N 27
DG N7 C5 SING Y N 28
DG C5 C6 SING N N 29
DG C5 C4 DOUB Y N 30
DG C6 O6 DOUB N N 31
DG C6 N1 SING N N 32
DG N1 C2 SING N N 33
DG N1 H1 SING N N 34
DG C2 N2 SING N N 35
DG C2 N3 DOUB N N 36
DG N2 H21 SING N N 37
DG N2 H22 SING N N 38
DG N3 C4 SING N N 39
DT OP3 P SING N N 1
DT OP3 HOP3 SING N N 2
DT P OP1 DOUB N N 3
DT P OP2 SING N N 4
DT P "O5'" SING N N 5
DT OP2 HOP2 SING N N 6
DT "O5'" "C5'" SING N N 7
DT "C5'" "C4'" SING N N 8
DT "C5'" "H5'" SING N N 9
DT "C5'" "H5''" SING N N 10
DT "C4'" "O4'" SING N N 11
DT "C4'" "C3'" SING N N 12
DT "C4'" "H4'" SING N N 13
DT "O4'" "C1'" SING N N 14
DT "C3'" "O3'" SING N N 15
DT "C3'" "C2'" SING N N 16
DT "C3'" "H3'" SING N N 17
DT "O3'" "HO3'" SING N N 18
DT "C2'" "C1'" SING N N 19
DT "C2'" "H2'" SING N N 20
DT "C2'" "H2''" SING N N 21
DT "C1'" N1 SING N N 22
DT "C1'" "H1'" SING N N 23
DT N1 C2 SING N N 24
DT N1 C6 SING N N 25
DT C2 O2 DOUB N N 26
DT C2 N3 SING N N 27
DT N3 C4 SING N N 28
DT N3 H3 SING N N 29
DT C4 O4 DOUB N N 30
DT C4 C5 SING N N 31
DT C5 C7 SING N N 32
DT C5 C6 DOUB N N 33
DT C7 H71 SING N N 34
DT C7 H72 SING N N 35
DT C7 H73 SING N N 36
DT C6 H6 SING N N 37
HOH O H1 SING N N 1
HOH O H2 SING N N 2
RKL RU N1 SING N N 1
RKL RU N2 SING N N 2
RKL RU N5 SING N N 3
RKL RU N8 SING N N 4
RKL RU N9 SING N N 5
RKL RU N12 SING N N 6
RKL C1 N2 DOUB Y N 7
RKL C1 C5 SING Y N 8
RKL C1 C10 SING Y N 9
RKL N1 C10 DOUB Y N 10
RKL N1 C12 SING Y N 11
RKL C2 N2 SING Y N 12
RKL C2 C3 DOUB Y N 13
RKL C2 H2 SING N N 14
RKL C3 C4 SING Y N 15
RKL C3 H3 SING N N 16
RKL N3 C6 DOUB Y N 17
RKL N3 C15 SING Y N 18
RKL C4 C5 DOUB Y N 19
RKL C4 H4 SING N N 20
RKL N4 C7 DOUB Y N 21
RKL N4 C13 SING Y N 22
RKL C5 C6 SING Y N 23
RKL N5 C19 DOUB Y N 24
RKL N5 C20 SING Y N 25
RKL C6 C7 SING Y N 26
RKL N6 C21 SING Y N 27
RKL N6 C22 DOUB Y N 28
RKL C7 C8 SING Y N 29
RKL N7 C25 DOUB Y N 30
RKL N7 C27 SING Y N 31
RKL C8 C9 DOUB Y N 32
RKL C8 C10 SING Y N 33
RKL N8 C26 DOUB Y N 34
RKL N8 C28 SING Y N 35
RKL C9 C11 SING Y N 36
RKL C9 H9 SING N N 37
RKL N9 C29 DOUB Y N 38
RKL N9 C30 SING Y N 39
RKL N10 C31 SING Y N 40
RKL N10 C32 DOUB Y N 41
RKL C11 C12 DOUB Y N 42
RKL C11 H11 SING N N 43
RKL N11 C35 DOUB Y N 44
RKL N11 C37 SING Y N 45
RKL C12 H12 SING N N 46
RKL N12 C36 DOUB Y N 47
RKL N12 C38 SING Y N 48
RKL C13 C14 SING Y N 49
RKL C13 C15 DOUB Y N 50
RKL C14 C18 DOUB Y N 51
RKL C14 H14 SING N N 52
RKL C15 C16 SING Y N 53
RKL C16 C17 DOUB Y N 54
RKL C16 H16 SING N N 55
RKL C17 C18 SING Y N 56
RKL C17 H17 SING N N 57
RKL C18 H18 SING N N 58
RKL C19 C22 SING Y N 59
RKL C19 C26 SING Y N 60
RKL C20 C21 DOUB Y N 61
RKL C20 H20 SING N N 62
RKL C21 H21 SING N N 63
RKL C22 C23 SING Y N 64
RKL C23 C24 DOUB Y N 65
RKL C23 H23 SING N N 66
RKL C24 C25 SING Y N 67
RKL C24 H24 SING N N 68
RKL C25 C26 SING Y N 69
RKL C27 C28 DOUB Y N 70
RKL C27 H27 SING N N 71
RKL C28 H28 SING N N 72
RKL C29 C32 SING Y N 73
RKL C29 C36 SING Y N 74
RKL C30 C31 DOUB Y N 75
RKL C30 H30 SING N N 76
RKL C31 H31 SING N N 77
RKL C32 C33 SING Y N 78
RKL C33 C34 DOUB Y N 79
RKL C33 H33 SING N N 80
RKL C34 C35 SING Y N 81
RKL C34 H34 SING N N 82
RKL C35 C36 SING Y N 83
RKL C37 C38 DOUB Y N 84
RKL C37 H37 SING N N 85
RKL C38 H38 SING N N 86
#
_ndb_struct_conf_na.entry_id 4LTH
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 2 1_555 A DG 9 7_555 0.106 -0.091 0.183 -11.811 6.485 0.829 1 A_DC2:DG9_A A 2 ? A 9 ? 19 1
1 A DG 3 1_555 A DC 8 7_555 -0.212 -0.045 0.141 22.245 -5.406 -0.611 2 A_DG3:DC8_A A 3 ? A 8 ? 19 1
1 A DG 4 1_555 A DC 7 7_555 -0.238 -0.138 -0.120 -8.420 2.431 -1.061 3 A_DG4:DC7_A A 4 ? A 7 ? 19 1
1 A DC 5 1_555 A DG 6 7_555 0.120 -0.126 0.203 -2.142 -9.774 -1.179 4 A_DC5:DG6_A A 5 ? A 6 ? 19 1
1 A DG 6 1_555 A DC 5 7_555 -0.120 -0.126 0.203 2.142 -9.774 -1.179 5 A_DG6:DC5_A A 6 ? A 5 ? 19 1
1 A DC 7 1_555 A DG 4 7_555 0.238 -0.138 -0.120 8.420 2.431 -1.062 6 A_DC7:DG4_A A 7 ? A 4 ? 19 1
1 A DC 8 1_555 A DG 3 7_555 0.212 -0.045 0.141 -22.245 -5.406 -0.611 7 A_DC8:DG3_A A 8 ? A 3 ? 19 1
1 A DG 9 1_555 A DC 2 7_555 -0.106 -0.091 0.183 11.811 6.485 0.829 8 A_DG9:DC2_A A 9 ? A 2 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 2 1_555 A DG 9 7_555 A DG 3 1_555 A DC 8 7_555 -0.475 1.733 2.698 1.258 3.477 19.384 3.612 1.909 2.924 10.207 -3.693 19.731 1 AA_DC2DG3:DC8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ?
1 A DG 3 1_555 A DC 8 7_555 A DG 4 1_555 A DC 7 7_555 -0.083 0.854 5.153 -2.322 49.972 14.936 -5.315 -0.197 2.345 74.354 3.455 52.070 2 AA_DG3DG4:DC7DC8_AA A 3 ? A 8 ? A 4 ? A 7 ?
1 A DG 4 1_555 A DC 7 7_555 A DC 5 1_555 A DG 6 7_555 -0.895 0.201 3.229 -3.936 -1.160 38.017 0.453 0.872 3.295 -1.774 6.021 38.230 3 AA_DG4DC5:DG6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ?
1 A DC 5 1_555 A DG 6 7_555 A DG 6 1_555 A DC 5 7_555 0.000 0.914 3.557 0.000 21.032 27.105 -2.413 0.000 3.387 38.383 0.000 34.187 4 AA_DC5DG6:DC5DG6_AA A 5 ? A 6 ? A 6 ? A 5 ?
1 A DG 6 1_555 A DC 5 7_555 A DC 7 1_555 A DG 4 7_555 0.895 0.201 3.229 3.936 -1.160 38.017 0.453 -0.872 3.295 -1.774 -6.021 38.230 5 AA_DG6DC7:DG4DC5_AA A 6 ? A 5 ? A 7 ? A 4 ?
1 A DC 7 1_555 A DG 4 7_555 A DC 8 1_555 A DG 3 7_555 0.083 0.854 5.153 2.322 49.972 14.936 -5.315 0.197 2.345 74.354 -3.455 52.070 6 AA_DC7DC8:DG3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ?
1 A DC 8 1_555 A DG 3 7_555 A DG 9 1_555 A DC 2 7_555 0.475 1.733 2.698 -1.258 3.477 19.384 3.612 -1.909 2.924 10.207 3.693 19.731 7 AA_DC8DG9:DC2DG3_AA A 8 ? A 3 ? A 9 ? A 2 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'Ru(tap)2(dppz) complex' RKL
3 'BARIUM ION' BA
4 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 3QRN
_pdbx_initial_refinement_model.details 'PDB ENTRY 3QRN'
#