data_2IE1
#
_entry.id 2IE1
#
_citation.id primary
_citation.title
'Polyamines stabilize left-handed Z-DNA. We found new type of polyamine which stabilize left-handed Z-DNA by X-ray crystallography'
_citation.journal_abbrev 'To be published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Ohishi, H.' 1 ?
primary 'Odoko, M.' 2 ?
primary 'Tsukamoto, K.' 3 ?
primary 'Hiyama, Y.' 4 ?
primary 'Maezaki, N.' 5 ?
primary 'Grzeskowiak, K.' 6 ?
primary 'Ishida, T.' 7 ?
primary 'Tanaka, T.' 8 ?
primary 'Okabe, N.' 9 ?
primary 'Fukuyama, K.' 10 ?
#
_cell.entry_id 2IE1
_cell.length_a 17.64
_cell.length_b 30.38
_cell.length_c 43.63
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 2IE1
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 19
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "DNA (5'-D(*DCP*DGP*DCP*DGP*DCP*DG)-3')" 1810.205 2 ? ? ? ?
2 non-polymer syn "N-(2-AMINOETHYL)-N'-{2-[(2-AMINOETHYL)AMINO]ETHYL}ETHANE-1,2-DIAMINE" 189.302 2 ? ? ? ?
3 water nat water 18.015 55 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGCGCG
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DC n
1 4 DG n
1 5 DC n
1 6 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific 'Homo sapiens'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 9606
_pdbx_entity_src_syn.details ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 2IE1
_struct_ref.pdbx_db_accession 2IE1
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 2IE1 A 1 ? 6 ? 2IE1 1 ? 6 ? 1 6
2 1 2IE1 B 1 ? 6 ? 2IE1 7 ? 12 ? 7 12
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
PAW non-polymer . "N-(2-AMINOETHYL)-N'-{2-[(2-AMINOETHYL)AMINO]ETHYL}ETHANE-1,2-DIAMINE" 'N1-{2-[2-(2-AMINO-ETHYLAMINO)-ETHYLAMINO]-ETHYL}-ETHANE-1,2-DIAMINE' 'C8 H23 N5' 189.302
#
_exptl.entry_id 2IE1
_exptl.method 'X-ray diffraction'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 1.533237
_exptl_crystal.density_percent_sol 23.82
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 277
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.pdbx_details 'pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K'
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 95
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 210'
_diffrn_detector.pdbx_collection_date 2005-06-28
_diffrn_detector.details monochro
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator Ni
_diffrn_radiation.pdbx_diffrn_protocol 'Single wavelength'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.0
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source Synchrotron
_diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A'
_diffrn_source.pdbx_synchrotron_site 'Photon Factory'
_diffrn_source.pdbx_synchrotron_beamline BL-6A
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.0
#
_reflns.entry_id 2IE1
_reflns.observed_criterion_sigma_F 2.0
_reflns.observed_criterion_sigma_I 4.0
_reflns.d_resolution_high 1.6
_reflns.d_resolution_low 20.0
_reflns.number_all 3346
_reflns.number_obs 3249
_reflns.percent_possible_obs 97.1
_reflns.pdbx_Rmerge_I_obs 0.055
_reflns.pdbx_Rsym_value 0.047
_reflns.pdbx_netI_over_sigmaI 6400
_reflns.B_iso_Wilson_estimate 8.8
_reflns.pdbx_redundancy 4.8
_reflns.R_free_details ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.6
_reflns_shell.d_res_low ?
_reflns_shell.percent_possible_all 97.1
_reflns_shell.Rmerge_I_obs 0.055
_reflns_shell.pdbx_Rsym_value 0.047
_reflns_shell.meanI_over_sigI_obs 6400
_reflns_shell.pdbx_redundancy 4.8
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 3346
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 2IE1
_refine.ls_d_res_high 1.6
_refine.ls_d_res_low 20
_refine.pdbx_ls_sigma_F 2.0
_refine.pdbx_ls_sigma_I 4.0
_refine.ls_number_reflns_all 3346
_refine.ls_number_reflns_obs 3249
_refine.ls_number_reflns_R_free 320
_refine.ls_percent_reflns_obs 97.1
_refine.ls_R_factor_all 0.204
_refine.ls_R_factor_obs 0.202
_refine.ls_R_factor_R_work 0.19
_refine.ls_R_factor_R_free 0.205
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model '1dj6 in PDB'
_refine.pdbx_ls_cross_valid_method ?
_refine.pdbx_R_Free_selection_details random
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_isotropic_thermal_model Isotropic
_refine.B_iso_mean 8.8
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.details ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_overall_ESU_R ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-ray diffraction'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-ray diffraction'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 274
_refine_hist.pdbx_number_atoms_ligand 82
_refine_hist.number_atoms_solvent 165
_refine_hist.number_atoms_total 521
_refine_hist.d_res_high 1.6
_refine_hist.d_res_low 20
#
_struct.entry_id 2IE1
_struct.title
'Polyamines stabilize left-handed Z-DNA. We found new type of polyamine which stabilize left-handed Z-DNA by X-ray crystallography'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2IE1
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text
;deoxy nucleic acid, d(CGCGCG)2, Z-DNA, N1-{2-[2-(2-Amino-ethylamino)-ethylamino]-ethyl}-ethane-1, 2-diamine, PA(2222), polyamine, metal free crystal structure, DNA
;
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 3 ?
F N N 3 ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A PAW 101 ? 9 'BINDING SITE FOR RESIDUE PAW A 101'
AC2 Software B PAW 102 ? 12 'BINDING SITE FOR RESIDUE PAW B 102'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 9 DG A 2 ? DG A 2 . ? 4_476 ?
2 AC1 9 DC A 3 ? DC A 3 . ? 4_476 ?
3 AC1 9 DC A 3 ? DC A 3 . ? 1_555 ?
4 AC1 9 DG A 4 ? DG A 4 . ? 1_555 ?
5 AC1 9 HOH E . ? HOH A 107 . ? 1_555 ?
6 AC1 9 HOH E . ? HOH A 112 . ? 4_476 ?
7 AC1 9 HOH E . ? HOH A 124 . ? 1_555 ?
8 AC1 9 HOH F . ? HOH B 107 . ? 3_555 ?
9 AC1 9 HOH F . ? HOH B 128 . ? 2_575 ?
10 AC2 12 DG A 2 ? DG A 2 . ? 2_574 ?
11 AC2 12 DC A 5 ? DC A 5 . ? 3_545 ?
12 AC2 12 DG A 6 ? DG A 6 . ? 3_545 ?
13 AC2 12 HOH E . ? HOH A 112 . ? 2_574 ?
14 AC2 12 DG B 2 ? DG B 8 . ? 1_555 ?
15 AC2 12 DG B 2 ? DG B 8 . ? 1_455 ?
16 AC2 12 DC B 3 ? DC B 9 . ? 1_555 ?
17 AC2 12 DG B 4 ? DG B 10 . ? 1_555 ?
18 AC2 12 HOH F . ? HOH B 112 . ? 1_455 ?
19 AC2 12 HOH F . ? HOH B 116 . ? 1_555 ?
20 AC2 12 HOH F . ? HOH B 123 . ? 1_555 ?
21 AC2 12 HOH F . ? HOH B 133 . ? 1_555 ?
#
_atom_sites.entry_id 2IE1
_atom_sites.fract_transf_matrix[1][1] 0.05669
_atom_sites.fract_transf_matrix[1][2] 0.00000
_atom_sites.fract_transf_matrix[1][3] 0.00000
_atom_sites.fract_transf_matrix[2][1] 0.00000
_atom_sites.fract_transf_matrix[2][2] 0.03292
_atom_sites.fract_transf_matrix[2][3] 0.00000
_atom_sites.fract_transf_matrix[3][1] 0.00000
_atom_sites.fract_transf_matrix[3][2] 0.00000
_atom_sites.fract_transf_matrix[3][3] 0.02292
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
_atom_site.pdbx_label_index
ATOM 1 O "O5'" . DC A 1 1 ? 10.179 27.319 25.067 1.00 27.44 ? 1 DC A "O5'" 1 1
ATOM 2 C "C5'" . DC A 1 1 ? 10.448 28.807 24.816 1.00 26.58 ? 1 DC A "C5'" 1 1
ATOM 3 C "C4'" . DC A 1 1 ? 9.459 30.172 24.845 1.00 24.50 ? 1 DC A "C4'" 1 1
ATOM 4 O "O4'" . DC A 1 1 ? 8.196 29.778 24.420 1.00 25.62 ? 1 DC A "O4'" 1 1
ATOM 5 C "C3'" . DC A 1 1 ? 9.027 31.030 26.093 1.00 24.43 ? 1 DC A "C3'" 1 1
ATOM 6 O "O3'" . DC A 1 1 ? 8.537 32.301 25.779 1.00 23.65 ? 1 DC A "O3'" 1 1
ATOM 7 C "C2'" . DC A 1 1 ? 7.822 30.372 26.625 1.00 24.44 ? 1 DC A "C2'" 1 1
ATOM 8 C "C1'" . DC A 1 1 ? 7.163 29.962 25.383 1.00 22.73 ? 1 DC A "C1'" 1 1
ATOM 9 N N1 . DC A 1 1 ? 6.498 28.702 25.432 1.00 21.98 ? 1 DC A N1 1 1
ATOM 10 C C2 . DC A 1 1 ? 5.149 28.724 25.503 1.00 20.98 ? 1 DC A C2 1 1
ATOM 11 O O2 . DC A 1 1 ? 4.516 29.761 25.603 1.00 21.17 ? 1 DC A O2 1 1
ATOM 12 N N3 . DC A 1 1 ? 4.542 27.573 25.478 1.00 20.92 ? 1 DC A N3 1 1
ATOM 13 C C4 . DC A 1 1 ? 5.158 26.425 25.460 1.00 20.75 ? 1 DC A C4 1 1
ATOM 14 N N4 . DC A 1 1 ? 4.460 25.359 25.490 1.00 18.99 ? 1 DC A N4 1 1
ATOM 15 C C5 . DC A 1 1 ? 6.520 26.350 25.303 1.00 21.34 ? 1 DC A C5 1 1
ATOM 16 C C6 . DC A 1 1 ? 7.161 27.517 25.248 1.00 21.98 ? 1 DC A C6 1 1
ATOM 17 P P . DG A 1 2 ? 9.328 33.738 25.748 1.00 24.68 ? 2 DG A P 1 2
ATOM 18 O OP1 . DG A 1 2 ? 10.193 33.738 26.910 1.00 24.82 ? 2 DG A OP1 1 2
ATOM 19 O OP2 . DG A 1 2 ? 8.414 34.859 25.530 1.00 22.28 ? 2 DG A OP2 1 2
ATOM 20 O "O5'" . DG A 1 2 ? 10.060 33.720 24.336 1.00 23.50 ? 2 DG A "O5'" 1 2
ATOM 21 C "C5'" . DG A 1 2 ? 11.436 33.732 24.020 1.00 23.41 ? 2 DG A "C5'" 1 2
ATOM 22 C "C4'" . DG A 1 2 ? 11.778 33.162 22.632 1.00 23.04 ? 2 DG A "C4'" 1 2
ATOM 23 O "O4'" . DG A 1 2 ? 11.570 31.765 22.765 1.00 23.34 ? 2 DG A "O4'" 1 2
ATOM 24 C "C3'" . DG A 1 2 ? 11.050 33.462 21.314 1.00 23.68 ? 2 DG A "C3'" 1 2
ATOM 25 O "O3'" . DG A 1 2 ? 11.213 34.681 20.669 1.00 25.19 ? 2 DG A "O3'" 1 2
ATOM 26 C "C2'" . DG A 1 2 ? 11.634 32.428 20.496 1.00 23.00 ? 2 DG A "C2'" 1 2
ATOM 27 C "C1'" . DG A 1 2 ? 11.875 31.309 21.464 1.00 23.35 ? 2 DG A "C1'" 1 2
ATOM 28 N N9 . DG A 1 2 ? 11.192 30.105 21.312 1.00 21.84 ? 2 DG A N9 1 2
ATOM 29 C C8 . DG A 1 2 ? 11.823 28.972 21.265 1.00 22.60 ? 2 DG A C8 1 2
ATOM 30 N N7 . DG A 1 2 ? 11.044 27.955 21.389 1.00 22.53 ? 2 DG A N7 1 2
ATOM 31 C C5 . DG A 1 2 ? 9.785 28.468 21.499 1.00 22.71 ? 2 DG A C5 1 2
ATOM 32 C C6 . DG A 1 2 ? 8.563 27.826 21.792 1.00 23.23 ? 2 DG A C6 1 2
ATOM 33 O O6 . DG A 1 2 ? 8.309 26.636 22.062 1.00 24.46 ? 2 DG A O6 1 2
ATOM 34 N N1 . DG A 1 2 ? 7.578 28.731 21.827 1.00 21.44 ? 2 DG A N1 1 2
ATOM 35 C C2 . DG A 1 2 ? 7.722 29.961 21.531 1.00 21.08 ? 2 DG A C2 1 2
ATOM 36 N N2 . DG A 1 2 ? 6.551 30.434 21.594 1.00 21.05 ? 2 DG A N2 1 2
ATOM 37 N N3 . DG A 1 2 ? 8.804 30.595 21.100 1.00 21.71 ? 2 DG A N3 1 2
ATOM 38 C C4 . DG A 1 2 ? 9.839 29.819 21.378 1.00 22.46 ? 2 DG A C4 1 2
ATOM 39 P P . DC A 1 3 ? 9.867 35.494 20.195 1.00 27.47 ? 3 DC A P 1 3
ATOM 40 O OP1 . DC A 1 3 ? 10.182 36.942 20.197 1.00 27.19 ? 3 DC A OP1 1 3
ATOM 41 O OP2 . DC A 1 3 ? 8.785 35.047 21.078 1.00 26.42 ? 3 DC A OP2 1 3
ATOM 42 O "O5'" . DC A 1 3 ? 9.674 34.958 18.688 1.00 24.37 ? 3 DC A "O5'" 1 3
ATOM 43 C "C5'" . DC A 1 3 ? 8.930 35.321 17.540 1.00 23.63 ? 3 DC A "C5'" 1 3
ATOM 44 C "C4'" . DC A 1 3 ? 7.435 34.847 17.553 1.00 24.40 ? 3 DC A "C4'" 1 3
ATOM 45 O "O4'" . DC A 1 3 ? 7.233 33.479 17.092 1.00 23.70 ? 3 DC A "O4'" 1 3
ATOM 46 C "C3'" . DC A 1 3 ? 6.604 35.046 18.840 1.00 23.04 ? 3 DC A "C3'" 1 3
ATOM 47 O "O3'" . DC A 1 3 ? 5.245 35.392 18.711 1.00 22.74 ? 3 DC A "O3'" 1 3
ATOM 48 C "C2'" . DC A 1 3 ? 6.667 33.601 19.174 1.00 22.93 ? 3 DC A "C2'" 1 3
ATOM 49 C "C1'" . DC A 1 3 ? 6.478 32.755 17.952 1.00 22.14 ? 3 DC A "C1'" 1 3
ATOM 50 N N1 . DC A 1 3 ? 7.187 31.507 18.020 1.00 21.09 ? 3 DC A N1 1 3
ATOM 51 C C2 . DC A 1 3 ? 6.401 30.447 18.256 1.00 20.52 ? 3 DC A C2 1 3
ATOM 52 O O2 . DC A 1 3 ? 5.133 30.614 18.347 1.00 19.88 ? 3 DC A O2 1 3
ATOM 53 N N3 . DC A 1 3 ? 7.104 29.298 18.347 1.00 20.88 ? 3 DC A N3 1 3
ATOM 54 C C4 . DC A 1 3 ? 8.428 29.260 18.155 1.00 19.95 ? 3 DC A C4 1 3
ATOM 55 N N4 . DC A 1 3 ? 9.130 28.136 18.111 1.00 22.29 ? 3 DC A N4 1 3
ATOM 56 C C5 . DC A 1 3 ? 9.187 30.369 17.949 1.00 18.98 ? 3 DC A C5 1 3
ATOM 57 C C6 . DC A 1 3 ? 8.525 31.496 17.906 1.00 18.94 ? 3 DC A C6 1 3
ATOM 58 P P . DG A 1 4 ? 4.699 36.903 18.467 1.00 28.13 ? 4 DG A P 1 4
ATOM 59 O OP1 . DG A 1 4 ? 5.197 37.918 19.451 1.00 25.72 ? 4 DG A OP1 1 4
ATOM 60 O OP2 . DG A 1 4 ? 3.317 36.560 18.708 1.00 26.19 ? 4 DG A OP2 1 4
ATOM 61 O "O5'" . DG A 1 4 ? 4.751 37.400 16.858 1.00 23.48 ? 4 DG A "O5'" 1 4
ATOM 62 C "C5'" . DG A 1 4 ? 4.910 36.750 15.621 1.00 23.53 ? 4 DG A "C5'" 1 4
ATOM 63 C "C4'" . DG A 1 4 ? 5.708 37.609 14.614 1.00 23.83 ? 4 DG A "C4'" 1 4
ATOM 64 O "O4'" . DG A 1 4 ? 7.089 37.438 14.971 1.00 24.46 ? 4 DG A "O4'" 1 4
ATOM 65 C "C3'" . DG A 1 4 ? 5.669 37.450 12.995 1.00 23.87 ? 4 DG A "C3'" 1 4
ATOM 66 O "O3'" . DG A 1 4 ? 5.221 38.614 12.235 1.00 25.72 ? 4 DG A "O3'" 1 4
ATOM 67 C "C2'" . DG A 1 4 ? 7.109 37.368 12.561 1.00 22.95 ? 4 DG A "C2'" 1 4
ATOM 68 C "C1'" . DG A 1 4 ? 7.940 37.281 13.791 1.00 22.27 ? 4 DG A "C1'" 1 4
ATOM 69 N N9 . DG A 1 4 ? 8.580 36.017 13.995 1.00 21.49 ? 4 DG A N9 1 4
ATOM 70 C C8 . DG A 1 4 ? 9.935 35.848 14.010 1.00 20.46 ? 4 DG A C8 1 4
ATOM 71 N N7 . DG A 1 4 ? 10.279 34.647 14.035 1.00 19.51 ? 4 DG A N7 1 4
ATOM 72 C C5 . DG A 1 4 ? 9.075 34.010 14.251 1.00 20.16 ? 4 DG A C5 1 4
ATOM 73 C C6 . DG A 1 4 ? 8.809 32.686 14.362 1.00 18.52 ? 4 DG A C6 1 4
ATOM 74 O O6 . DG A 1 4 ? 9.611 31.824 14.460 1.00 20.63 ? 4 DG A O6 1 4
ATOM 75 N N1 . DG A 1 4 ? 7.529 32.369 14.436 1.00 18.74 ? 4 DG A N1 1 4
ATOM 76 C C2 . DG A 1 4 ? 6.477 33.201 14.331 1.00 18.05 ? 4 DG A C2 1 4
ATOM 77 N N2 . DG A 1 4 ? 5.297 32.716 14.201 1.00 18.88 ? 4 DG A N2 1 4
ATOM 78 N N3 . DG A 1 4 ? 6.649 34.471 14.217 1.00 20.25 ? 4 DG A N3 1 4
ATOM 79 C C4 . DG A 1 4 ? 8.014 34.826 14.231 1.00 19.76 ? 4 DG A C4 1 4
ATOM 80 P P . DC A 1 5 ? 3.688 38.654 11.738 1.00 29.54 ? 5 DC A P 1 5
ATOM 81 O OP1 . DC A 1 5 ? 3.383 39.302 10.459 1.00 28.82 ? 5 DC A OP1 1 5
ATOM 82 O OP2 . DC A 1 5 ? 2.841 39.103 12.858 1.00 28.12 ? 5 DC A OP2 1 5
ATOM 83 O "O5'" . DC A 1 5 ? 3.082 37.153 11.607 1.00 26.44 ? 5 DC A "O5'" 1 5
ATOM 84 C "C5'" . DC A 1 5 ? 2.670 36.653 10.264 1.00 24.47 ? 5 DC A "C5'" 1 5
ATOM 85 C "C4'" . DC A 1 5 ? 2.467 35.245 10.164 1.00 22.01 ? 5 DC A "C4'" 1 5
ATOM 86 O "O4'" . DC A 1 5 ? 3.740 34.840 9.896 1.00 21.68 ? 5 DC A "O4'" 1 5
ATOM 87 C "C3'" . DC A 1 5 ? 1.969 34.704 11.519 1.00 23.51 ? 5 DC A "C3'" 1 5
ATOM 88 O "O3'" . DC A 1 5 ? 0.743 33.916 11.291 1.00 25.00 ? 5 DC A "O3'" 1 5
ATOM 89 C "C2'" . DC A 1 5 ? 3.156 33.878 11.814 1.00 22.83 ? 5 DC A "C2'" 1 5
ATOM 90 C "C1'" . DC A 1 5 ? 3.861 33.633 10.509 1.00 20.63 ? 5 DC A "C1'" 1 5
ATOM 91 N N1 . DC A 1 5 ? 5.261 33.478 10.626 1.00 20.20 ? 5 DC A N1 1 5
ATOM 92 C C2 . DC A 1 5 ? 5.718 32.228 10.727 1.00 20.24 ? 5 DC A C2 1 5
ATOM 93 O O2 . DC A 1 5 ? 4.874 31.349 10.624 1.00 20.56 ? 5 DC A O2 1 5
ATOM 94 N N3 . DC A 1 5 ? 7.046 31.962 10.910 1.00 18.76 ? 5 DC A N3 1 5
ATOM 95 C C4 . DC A 1 5 ? 7.908 32.914 10.845 1.00 17.91 ? 5 DC A C4 1 5
ATOM 96 N N4 . DC A 1 5 ? 9.143 32.646 11.016 1.00 17.65 ? 5 DC A N4 1 5
ATOM 97 C C5 . DC A 1 5 ? 7.476 34.253 10.758 1.00 20.77 ? 5 DC A C5 1 5
ATOM 98 C C6 . DC A 1 5 ? 6.135 34.472 10.650 1.00 19.36 ? 5 DC A C6 1 5
ATOM 99 P P . DG A 1 6 ? -0.712 34.417 11.543 1.00 23.80 ? 6 DG A P 1 6
ATOM 100 O OP1 . DG A 1 6 ? -0.738 35.497 12.556 1.00 22.85 ? 6 DG A OP1 1 6
ATOM 101 O OP2 . DG A 1 6 ? -1.465 33.224 11.639 1.00 24.54 ? 6 DG A OP2 1 6
ATOM 102 O "O5'" . DG A 1 6 ? -0.965 35.098 10.073 1.00 24.30 ? 6 DG A "O5'" 1 6
ATOM 103 C "C5'" . DG A 1 6 ? -1.018 34.525 8.751 1.00 20.34 ? 6 DG A "C5'" 1 6
ATOM 104 C "C4'" . DG A 1 6 ? -1.258 35.750 7.913 1.00 21.11 ? 6 DG A "C4'" 1 6
ATOM 105 O "O4'" . DG A 1 6 ? -0.266 36.676 7.820 1.00 19.65 ? 6 DG A "O4'" 1 6
ATOM 106 C "C3'" . DG A 1 6 ? -1.325 35.358 6.575 1.00 22.07 ? 6 DG A "C3'" 1 6
ATOM 107 O "O3'" . DG A 1 6 ? -2.410 35.992 6.070 1.00 22.65 ? 6 DG A "O3'" 1 6
ATOM 108 C "C2'" . DG A 1 6 ? -0.122 35.620 5.885 1.00 20.77 ? 6 DG A "C2'" 1 6
ATOM 109 C "C1'" . DG A 1 6 ? 0.272 36.813 6.554 1.00 18.81 ? 6 DG A "C1'" 1 6
ATOM 110 N N9 . DG A 1 6 ? 1.669 36.948 6.664 1.00 18.04 ? 6 DG A N9 1 6
ATOM 111 C C8 . DG A 1 6 ? 2.340 38.040 6.554 1.00 16.58 ? 6 DG A C8 1 6
ATOM 112 N N7 . DG A 1 6 ? 3.590 37.866 6.519 1.00 18.76 ? 6 DG A N7 1 6
ATOM 113 C C5 . DG A 1 6 ? 3.766 36.543 6.919 1.00 18.30 ? 6 DG A C5 1 6
ATOM 114 C C6 . DG A 1 6 ? 4.909 35.698 7.011 1.00 19.18 ? 6 DG A C6 1 6
ATOM 115 O O6 . DG A 1 6 ? 6.116 35.924 6.910 1.00 19.79 ? 6 DG A O6 1 6
ATOM 116 N N1 . DG A 1 6 ? 4.565 34.391 7.232 1.00 17.78 ? 6 DG A N1 1 6
ATOM 117 C C2 . DG A 1 6 ? 3.386 33.815 7.067 1.00 16.64 ? 6 DG A C2 1 6
ATOM 118 N N2 . DG A 1 6 ? 3.334 32.460 7.032 1.00 15.05 ? 6 DG A N2 1 6
ATOM 119 N N3 . DG A 1 6 ? 2.356 34.572 6.846 1.00 16.23 ? 6 DG A N3 1 6
ATOM 120 C C4 . DG A 1 6 ? 2.591 35.919 6.837 1.00 19.09 ? 6 DG A C4 1 6
ATOM 121 O "O5'" . DC B 1 1 ? 10.820 26.963 7.100 1.00 24.48 ? 7 DC B "O5'" 1 1
ATOM 122 C "C5'" . DC B 1 1 ? 9.943 27.737 7.815 1.00 24.06 ? 7 DC B "C5'" 1 1
ATOM 123 C "C4'" . DC B 1 1 ? 8.581 27.259 8.039 1.00 23.56 ? 7 DC B "C4'" 1 1
ATOM 124 O "O4'" . DC B 1 1 ? 8.232 28.502 8.641 1.00 22.80 ? 7 DC B "O4'" 1 1
ATOM 125 C "C3'" . DC B 1 1 ? 7.665 26.936 6.781 1.00 23.70 ? 7 DC B "C3'" 1 1
ATOM 126 O "O3'" . DC B 1 1 ? 6.485 26.147 7.075 1.00 22.93 ? 7 DC B "O3'" 1 1
ATOM 127 C "C2'" . DC B 1 1 ? 7.297 28.369 6.442 1.00 22.03 ? 7 DC B "C2'" 1 1
ATOM 128 C "C1'" . DC B 1 1 ? 7.321 29.135 7.786 1.00 22.13 ? 7 DC B "C1'" 1 1
ATOM 129 N N1 . DC B 1 1 ? 7.726 30.524 7.696 1.00 20.91 ? 7 DC B N1 1 1
ATOM 130 C C2 . DC B 1 1 ? 6.796 31.415 7.612 1.00 20.96 ? 7 DC B C2 1 1
ATOM 131 O O2 . DC B 1 1 ? 5.623 31.151 7.406 1.00 23.83 ? 7 DC B O2 1 1
ATOM 132 N N3 . DC B 1 1 ? 7.078 32.680 7.741 1.00 21.43 ? 7 DC B N3 1 1
ATOM 133 C C4 . DC B 1 1 ? 8.234 33.168 7.680 1.00 21.16 ? 7 DC B C4 1 1
ATOM 134 N N4 . DC B 1 1 ? 8.274 34.514 7.533 1.00 21.92 ? 7 DC B N4 1 1
ATOM 135 C C5 . DC B 1 1 ? 9.286 32.281 7.824 1.00 20.74 ? 7 DC B C5 1 1
ATOM 136 C C6 . DC B 1 1 ? 8.997 30.961 7.842 1.00 20.21 ? 7 DC B C6 1 1
ATOM 137 P P . DG B 1 2 ? 6.135 24.620 7.045 1.00 22.97 ? 8 DG B P 1 2
ATOM 138 O OP1 . DG B 1 2 ? 6.651 24.143 5.812 1.00 19.46 ? 8 DG B OP1 1 2
ATOM 139 O OP2 . DG B 1 2 ? 4.687 24.786 7.288 1.00 24.57 ? 8 DG B OP2 1 2
ATOM 140 O "O5'" . DG B 1 2 ? 6.798 23.989 8.402 1.00 22.39 ? 8 DG B "O5'" 1 2
ATOM 141 C "C5'" . DG B 1 2 ? 6.384 24.377 9.727 1.00 22.44 ? 8 DG B "C5'" 1 2
ATOM 142 C "C4'" . DG B 1 2 ? 7.276 23.874 10.780 1.00 22.82 ? 8 DG B "C4'" 1 2
ATOM 143 O "O4'" . DG B 1 2 ? 8.497 24.533 10.738 1.00 24.00 ? 8 DG B "O4'" 1 2
ATOM 144 C "C3'" . DG B 1 2 ? 6.874 23.977 12.199 1.00 24.70 ? 8 DG B "C3'" 1 2
ATOM 145 O "O3'" . DG B 1 2 ? 6.265 22.772 12.728 1.00 24.45 ? 8 DG B "O3'" 1 2
ATOM 146 C "C2'" . DG B 1 2 ? 8.284 23.909 12.799 1.00 23.62 ? 8 DG B "C2'" 1 2
ATOM 147 C "C1'" . DG B 1 2 ? 9.210 24.481 11.894 1.00 23.14 ? 8 DG B "C1'" 1 2
ATOM 148 N N9 . DG B 1 2 ? 9.620 25.846 12.015 1.00 23.02 ? 8 DG B N9 1 2
ATOM 149 C C8 . DG B 1 2 ? 10.914 26.207 11.944 1.00 23.78 ? 8 DG B C8 1 2
ATOM 150 N N7 . DG B 1 2 ? 11.139 27.436 11.654 1.00 22.17 ? 8 DG B N7 1 2
ATOM 151 C C5 . DG B 1 2 ? 9.884 27.903 11.467 1.00 21.40 ? 8 DG B C5 1 2
ATOM 152 C C6 . DG B 1 2 ? 9.452 29.196 11.218 1.00 22.49 ? 8 DG B C6 1 2
ATOM 153 O O6 . DG B 1 2 ? 10.145 30.184 10.904 1.00 22.05 ? 8 DG B O6 1 2
ATOM 154 N N1 . DG B 1 2 ? 8.102 29.293 11.330 1.00 20.23 ? 8 DG B N1 1 2
ATOM 155 C C2 . DG B 1 2 ? 7.258 28.316 11.518 1.00 20.45 ? 8 DG B C2 1 2
ATOM 156 N N2 . DG B 1 2 ? 5.967 28.488 11.492 1.00 18.99 ? 8 DG B N2 1 2
ATOM 157 N N3 . DG B 1 2 ? 7.657 27.111 11.701 1.00 23.19 ? 8 DG B N3 1 2
ATOM 158 C C4 . DG B 1 2 ? 8.982 26.962 11.656 1.00 21.89 ? 8 DG B C4 1 2
ATOM 159 P P . DC B 1 3 ? 4.917 22.590 13.280 1.00 24.24 ? 9 DC B P 1 3
ATOM 160 O OP1 . DC B 1 3 ? 4.861 21.863 14.506 1.00 23.59 ? 9 DC B OP1 1 3
ATOM 161 O OP2 . DC B 1 3 ? 4.040 22.288 12.199 1.00 24.83 ? 9 DC B OP2 1 3
ATOM 162 O "O5'" . DC B 1 3 ? 4.534 23.988 13.635 1.00 25.53 ? 9 DC B "O5'" 1 3
ATOM 163 C "C5'" . DC B 1 3 ? 4.025 24.159 14.969 1.00 23.86 ? 9 DC B "C5'" 1 3
ATOM 164 C "C4'" . DC B 1 3 ? 3.349 25.432 15.456 1.00 24.05 ? 9 DC B "C4'" 1 3
ATOM 165 O "O4'" . DC B 1 3 ? 4.487 26.082 15.926 1.00 22.78 ? 9 DC B "O4'" 1 3
ATOM 166 C "C3'" . DC B 1 3 ? 2.576 26.455 14.535 1.00 24.90 ? 9 DC B "C3'" 1 3
ATOM 167 O "O3'" . DC B 1 3 ? 1.337 27.223 14.874 1.00 25.81 ? 9 DC B "O3'" 1 3
ATOM 168 C "C2'" . DC B 1 3 ? 3.596 27.460 14.185 1.00 24.02 ? 9 DC B "C2'" 1 3
ATOM 169 C "C1'" . DC B 1 3 ? 4.481 27.387 15.380 1.00 22.16 ? 9 DC B "C1'" 1 3
ATOM 170 N N1 . DC B 1 3 ? 5.789 27.743 15.011 1.00 19.90 ? 9 DC B N1 1 3
ATOM 171 C C2 . DC B 1 3 ? 5.969 29.067 14.920 1.00 19.91 ? 9 DC B C2 1 3
ATOM 172 O O2 . DC B 1 3 ? 4.982 29.869 14.888 1.00 19.66 ? 9 DC B O2 1 3
ATOM 173 N N3 . DC B 1 3 ? 7.294 29.384 14.778 1.00 18.62 ? 9 DC B N3 1 3
ATOM 174 C C4 . DC B 1 3 ? 8.258 28.569 14.841 1.00 15.76 ? 9 DC B C4 1 3
ATOM 175 N N4 . DC B 1 3 ? 9.440 28.988 14.528 1.00 17.30 ? 9 DC B N4 1 3
ATOM 176 C C5 . DC B 1 3 ? 8.065 27.298 15.243 1.00 17.19 ? 9 DC B C5 1 3
ATOM 177 C C6 . DC B 1 3 ? 6.811 26.893 15.212 1.00 18.31 ? 9 DC B C6 1 3
ATOM 178 P P . DG B 1 4 ? -0.090 26.648 14.873 1.00 23.34 ? 10 DG B P 1 4
ATOM 179 O OP1 . DG B 1 4 ? -0.228 25.924 13.612 1.00 23.69 ? 10 DG B OP1 1 4
ATOM 180 O OP2 . DG B 1 4 ? -0.951 27.763 15.152 1.00 24.24 ? 10 DG B OP2 1 4
ATOM 181 O "O5'" . DG B 1 4 ? -0.145 25.620 15.872 1.00 22.54 ? 10 DG B "O5'" 1 4
ATOM 182 C "C5'" . DG B 1 4 ? -0.316 26.278 17.071 1.00 22.49 ? 10 DG B "C5'" 1 4
ATOM 183 C "C4'" . DG B 1 4 ? -0.190 25.373 18.118 1.00 24.25 ? 10 DG B "C4'" 1 4
ATOM 184 O "O4'" . DG B 1 4 ? 1.002 24.813 17.830 1.00 23.88 ? 10 DG B "O4'" 1 4
ATOM 185 C "C3'" . DG B 1 4 ? -0.123 25.989 19.450 1.00 24.61 ? 10 DG B "C3'" 1 4
ATOM 186 O "O3'" . DG B 1 4 ? -1.477 25.882 19.908 1.00 27.05 ? 10 DG B "O3'" 1 4
ATOM 187 C "C2'" . DG B 1 4 ? 0.707 24.961 20.118 1.00 22.78 ? 10 DG B "C2'" 1 4
ATOM 188 C "C1'" . DG B 1 4 ? 1.416 24.222 19.015 1.00 22.86 ? 10 DG B "C1'" 1 4
ATOM 189 N N9 . DG B 1 4 ? 2.901 24.363 18.922 1.00 20.54 ? 10 DG B N9 1 4
ATOM 190 C C8 . DG B 1 4 ? 3.733 23.374 18.805 1.00 20.40 ? 10 DG B C8 1 4
ATOM 191 N N7 . DG B 1 4 ? 4.947 23.692 18.898 1.00 19.99 ? 10 DG B N7 1 4
ATOM 192 C C5 . DG B 1 4 ? 4.863 25.004 18.897 1.00 20.01 ? 10 DG B C5 1 4
ATOM 193 C C6 . DG B 1 4 ? 5.856 25.880 18.822 1.00 20.64 ? 10 DG B C6 1 4
ATOM 194 O O6 . DG B 1 4 ? 7.062 25.684 18.939 1.00 21.96 ? 10 DG B O6 1 4
ATOM 195 N N1 . DG B 1 4 ? 5.340 27.126 18.654 1.00 21.29 ? 10 DG B N1 1 4
ATOM 196 C C2 . DG B 1 4 ? 4.048 27.476 18.624 1.00 19.43 ? 10 DG B C2 1 4
ATOM 197 N N2 . DG B 1 4 ? 3.777 28.703 18.996 1.00 21.22 ? 10 DG B N2 1 4
ATOM 198 N N3 . DG B 1 4 ? 3.134 26.612 18.498 1.00 19.78 ? 10 DG B N3 1 4
ATOM 199 C C4 . DG B 1 4 ? 3.615 25.407 18.694 1.00 19.24 ? 10 DG B C4 1 4
ATOM 200 P P . DC B 1 5 ? -2.619 26.967 19.995 1.00 28.78 ? 11 DC B P 1 5
ATOM 201 O OP1 . DC B 1 5 ? -4.008 26.389 19.825 1.00 26.54 ? 11 DC B OP1 1 5
ATOM 202 O OP2 . DC B 1 5 ? -2.334 28.070 19.082 1.00 29.68 ? 11 DC B OP2 1 5
ATOM 203 O "O5'" . DC B 1 5 ? -1.896 27.026 21.471 1.00 28.34 ? 11 DC B "O5'" 1 5
ATOM 204 C "C5'" . DC B 1 5 ? -1.934 28.094 22.447 1.00 27.27 ? 11 DC B "C5'" 1 5
ATOM 205 C "C4'" . DC B 1 5 ? -0.867 29.263 22.542 1.00 25.02 ? 11 DC B "C4'" 1 5
ATOM 206 O "O4'" . DC B 1 5 ? 0.310 28.875 23.169 1.00 22.13 ? 11 DC B "O4'" 1 5
ATOM 207 C "C3'" . DC B 1 5 ? -0.638 30.105 21.296 1.00 25.30 ? 11 DC B "C3'" 1 5
ATOM 208 O "O3'" . DC B 1 5 ? -0.486 31.584 21.654 1.00 26.95 ? 11 DC B "O3'" 1 5
ATOM 209 C "C2'" . DC B 1 5 ? 0.700 29.436 21.038 1.00 23.71 ? 11 DC B "C2'" 1 5
ATOM 210 C "C1'" . DC B 1 5 ? 1.371 29.344 22.388 1.00 23.03 ? 11 DC B "C1'" 1 5
ATOM 211 N N1 . DC B 1 5 ? 2.490 28.405 22.328 1.00 22.33 ? 11 DC B N1 1 5
ATOM 212 C C2 . DC B 1 5 ? 3.775 28.749 22.120 1.00 20.45 ? 11 DC B C2 1 5
ATOM 213 O O2 . DC B 1 5 ? 4.172 29.866 22.008 1.00 21.46 ? 11 DC B O2 1 5
ATOM 214 N N3 . DC B 1 5 ? 4.714 27.831 22.065 1.00 20.67 ? 11 DC B N3 1 5
ATOM 215 C C4 . DC B 1 5 ? 4.463 26.579 22.218 1.00 18.81 ? 11 DC B C4 1 5
ATOM 216 N N4 . DC B 1 5 ? 5.398 25.734 21.980 1.00 20.15 ? 11 DC B N4 1 5
ATOM 217 C C5 . DC B 1 5 ? 3.183 26.147 22.403 1.00 21.55 ? 11 DC B C5 1 5
ATOM 218 C C6 . DC B 1 5 ? 2.215 27.099 22.409 1.00 21.37 ? 11 DC B C6 1 5
ATOM 219 P P . DG B 1 6 ? -1.601 32.855 21.673 1.00 26.81 ? 12 DG B P 1 6
ATOM 220 O OP1 . DG B 1 6 ? -2.057 32.780 20.257 1.00 24.81 ? 12 DG B OP1 1 6
ATOM 221 O OP2 . DG B 1 6 ? -0.923 34.041 22.235 1.00 26.16 ? 12 DG B OP2 1 6
ATOM 222 O "O5'" . DG B 1 6 ? -2.601 32.365 22.711 1.00 25.83 ? 12 DG B "O5'" 1 6
ATOM 223 C "C5'" . DG B 1 6 ? -2.315 32.458 24.125 1.00 26.05 ? 12 DG B "C5'" 1 6
ATOM 224 C "C4'" . DG B 1 6 ? -3.158 31.587 25.188 1.00 25.93 ? 12 DG B "C4'" 1 6
ATOM 225 O "O4'" . DG B 1 6 ? -3.191 30.202 25.054 1.00 25.88 ? 12 DG B "O4'" 1 6
ATOM 226 C "C3'" . DG B 1 6 ? -2.446 31.575 26.396 1.00 25.12 ? 12 DG B "C3'" 1 6
ATOM 227 O "O3'" . DG B 1 6 ? -2.817 32.752 26.922 1.00 28.82 ? 12 DG B "O3'" 1 6
ATOM 228 C "C2'" . DG B 1 6 ? -2.875 30.537 27.272 1.00 24.68 ? 12 DG B "C2'" 1 6
ATOM 229 C "C1'" . DG B 1 6 ? -3.061 29.478 26.304 1.00 24.72 ? 12 DG B "C1'" 1 6
ATOM 230 N N9 . DG B 1 6 ? -2.068 28.326 26.225 1.00 23.35 ? 12 DG B N9 1 6
ATOM 231 C C8 . DG B 1 6 ? -2.340 27.006 26.202 1.00 22.09 ? 12 DG B C8 1 6
ATOM 232 N N7 . DG B 1 6 ? -1.328 26.251 26.167 1.00 21.32 ? 12 DG B N7 1 6
ATOM 233 C C5 . DG B 1 6 ? -0.311 27.098 26.266 1.00 20.41 ? 12 DG B C5 1 6
ATOM 234 C C6 . DG B 1 6 ? 0.996 26.814 26.136 1.00 20.60 ? 12 DG B C6 1 6
ATOM 235 O O6 . DG B 1 6 ? 1.462 25.691 26.034 1.00 20.90 ? 12 DG B O6 1 6
ATOM 236 N N1 . DG B 1 6 ? 1.715 27.976 26.070 1.00 20.88 ? 12 DG B N1 1 6
ATOM 237 C C2 . DG B 1 6 ? 1.174 29.193 26.166 1.00 20.32 ? 12 DG B C2 1 6
ATOM 238 N N2 . DG B 1 6 ? 1.822 30.263 25.963 1.00 19.97 ? 12 DG B N2 1 6
ATOM 239 N N3 . DG B 1 6 ? -0.038 29.425 26.354 1.00 20.86 ? 12 DG B N3 1 6
ATOM 240 C C4 . DG B 1 6 ? -0.724 28.354 26.188 1.00 21.03 ? 12 DG B C4 1 6
HETATM 241 N N1 . PAW C 2 . ? 1.601 38.087 20.485 1.00 17.45 ? 101 PAW A N1 1 101
HETATM 242 C C2 . PAW C 2 . ? 0.629 38.320 19.560 1.00 19.19 ? 101 PAW A C2 1 101
HETATM 243 C C3 . PAW C 2 . ? 1.279 38.493 18.336 1.00 21.20 ? 101 PAW A C3 1 101
HETATM 244 C C5 . PAW C 2 . ? 0.563 36.755 16.603 1.00 25.43 ? 101 PAW A C5 1 101
HETATM 245 C C6 . PAW C 2 . ? 1.612 35.931 16.067 1.00 27.32 ? 101 PAW A C6 1 101
HETATM 246 N N4 . PAW C 2 . ? 0.710 38.091 17.074 1.00 24.08 ? 101 PAW A N4 1 101
HETATM 247 N N7 . PAW C 2 . ? 2.119 34.751 16.795 1.00 28.66 ? 101 PAW A N7 1 101
HETATM 248 C C8 . PAW C 2 . ? 1.347 33.950 17.731 1.00 29.06 ? 101 PAW A C8 1 101
HETATM 249 C C9 . PAW C 2 . ? 1.485 34.084 19.156 1.00 28.37 ? 101 PAW A C9 1 101
HETATM 250 N N10 . PAW C 2 . ? 2.654 33.474 19.779 1.00 28.97 ? 101 PAW A N10 1 101
HETATM 251 C C11 . PAW C 2 . ? 2.984 33.804 21.138 1.00 25.41 ? 101 PAW A C11 1 101
HETATM 252 C C12 . PAW C 2 . ? 3.716 34.977 21.445 1.00 24.70 ? 101 PAW A C12 1 101
HETATM 253 N N13 . PAW C 2 . ? 4.975 34.872 22.062 1.00 21.67 ? 101 PAW A N13 1 101
HETATM 254 N N1 . PAW D 2 . ? 3.807 25.339 11.531 1.00 21.10 ? 102 PAW B N1 1 102
HETATM 255 C C2 . PAW D 2 . ? 2.405 25.302 11.448 1.00 21.57 ? 102 PAW B C2 1 102
HETATM 256 C C3 . PAW D 2 . ? 1.681 24.361 12.272 1.00 23.05 ? 102 PAW B C3 1 102
HETATM 257 C C5 . PAW D 2 . ? -0.190 23.948 10.714 1.00 24.44 ? 102 PAW B C5 1 102
HETATM 258 C C6 . PAW D 2 . ? 0.448 23.724 9.410 1.00 23.79 ? 102 PAW B C6 1 102
HETATM 259 N N4 . PAW D 2 . ? 0.452 23.695 11.981 1.00 21.63 ? 102 PAW B N4 1 102
HETATM 260 N N7 . PAW D 2 . ? 0.377 24.716 8.354 1.00 25.21 ? 102 PAW B N7 1 102
HETATM 261 C C8 . PAW D 2 . ? 0.100 26.122 8.404 1.00 23.56 ? 102 PAW B C8 1 102
HETATM 262 C C9 . PAW D 2 . ? -1.246 26.506 8.155 1.00 25.51 ? 102 PAW B C9 1 102
HETATM 263 N N10 . PAW D 2 . ? -1.994 27.575 8.793 1.00 26.82 ? 102 PAW B N10 1 102
HETATM 264 C C11 . PAW D 2 . ? -1.432 28.342 9.894 1.00 27.50 ? 102 PAW B C11 1 102
HETATM 265 C C12 . PAW D 2 . ? -1.517 27.852 11.247 1.00 25.66 ? 102 PAW B C12 1 102
HETATM 266 N N13 . PAW D 2 . ? -2.861 27.796 11.675 1.00 25.41 ? 102 PAW B N13 1 102
HETATM 267 O O . HOH E 3 . ? -0.130 31.665 14.037 1.00 26.92 ? 102 HOH A O 1 102
HETATM 268 O O . HOH E 3 . ? -2.147 33.216 16.118 1.00 24.12 ? 103 HOH A O 1 103
HETATM 269 O O . HOH E 3 . ? 3.786 40.909 4.820 1.00 23.84 ? 104 HOH A O 1 104
HETATM 270 O O . HOH E 3 . ? 0.676 31.533 8.470 1.00 26.25 ? 105 HOH A O 1 105
HETATM 271 O O . HOH E 3 . ? 4.956 39.235 8.240 1.00 23.50 ? 106 HOH A O 1 106
HETATM 272 O O . HOH E 3 . ? 7.076 33.878 22.405 1.00 27.44 ? 107 HOH A O 1 107
HETATM 273 O O . HOH E 3 . ? 11.842 23.349 21.383 1.00 24.56 ? 108 HOH A O 1 108
HETATM 274 O O . HOH E 3 . ? -4.245 33.140 10.724 1.00 17.39 ? 109 HOH A O 1 109
HETATM 275 O O . HOH E 3 . ? 0.245 31.438 11.090 1.00 23.89 ? 110 HOH A O 1 110
HETATM 276 O O . HOH E 3 . ? 2.942 22.054 26.749 1.00 37.88 ? 111 HOH A O 1 111
HETATM 277 O O . HOH E 3 . ? 11.288 36.371 28.382 1.00 25.87 ? 112 HOH A O 1 112
HETATM 278 O O . HOH E 3 . ? 9.666 23.234 19.936 1.00 28.19 ? 113 HOH A O 1 113
HETATM 279 O O . HOH E 3 . ? 7.024 39.447 20.370 1.00 21.72 ? 114 HOH A O 1 114
HETATM 280 O O . HOH E 3 . ? -6.894 34.921 10.674 1.00 31.08 ? 115 HOH A O 1 115
HETATM 281 O O . HOH E 3 . ? 13.348 36.287 26.376 1.00 31.10 ? 116 HOH A O 1 116
HETATM 282 O O . HOH E 3 . ? 2.860 35.143 24.590 1.00 27.96 ? 117 HOH A O 1 117
HETATM 283 O O . HOH E 3 . ? 7.127 40.047 14.062 1.00 24.17 ? 118 HOH A O 1 118
HETATM 284 O O . HOH E 3 . ? -4.231 33.543 5.561 1.00 25.03 ? 119 HOH A O 1 119
HETATM 285 O O . HOH E 3 . ? 12.112 31.609 26.922 1.00 23.12 ? 120 HOH A O 1 120
HETATM 286 O O . HOH E 3 . ? -1.767 38.398 5.930 1.00 28.18 ? 121 HOH A O 1 121
HETATM 287 O O . HOH E 3 . ? -4.335 32.923 8.190 1.00 18.99 ? 122 HOH A O 1 122
HETATM 288 O O . HOH E 3 . ? 3.777 38.260 3.082 1.00 23.53 ? 123 HOH A O 1 123
HETATM 289 O O . HOH E 3 . ? 2.606 30.890 18.413 1.00 27.18 ? 124 HOH A O 1 124
HETATM 290 O O . HOH E 3 . ? 11.364 25.893 20.180 1.00 32.13 ? 125 HOH A O 1 125
HETATM 291 O O . HOH F 3 . ? 2.355 30.847 14.382 1.00 19.93 ? 103 HOH B O 1 103
HETATM 292 O O . HOH F 3 . ? 4.627 21.841 4.787 1.00 24.01 ? 104 HOH B O 1 104
HETATM 293 O O . HOH F 3 . ? 12.592 31.440 12.664 1.00 27.01 ? 105 HOH B O 1 105
HETATM 294 O O . HOH F 3 . ? -2.458 30.811 6.847 1.00 25.32 ? 106 HOH B O 1 106
HETATM 295 O O . HOH F 3 . ? 2.166 21.381 5.525 1.00 25.94 ? 107 HOH B O 1 107
HETATM 296 O O . HOH F 3 . ? 2.240 28.379 7.738 1.00 24.13 ? 108 HOH B O 1 108
HETATM 297 O O . HOH F 3 . ? 3.639 22.144 9.182 1.00 23.23 ? 109 HOH B O 1 109
HETATM 298 O O . HOH F 3 . ? 13.443 29.979 15.152 1.00 27.49 ? 110 HOH B O 1 110
HETATM 299 O O . HOH F 3 . ? 0.158 21.256 27.039 1.00 23.51 ? 111 HOH B O 1 111
HETATM 300 O O . HOH F 3 . ? 14.980 30.481 12.483 1.00 21.16 ? 112 HOH B O 1 112
HETATM 301 O O . HOH F 3 . ? 4.474 16.409 4.123 1.00 28.47 ? 113 HOH B O 1 113
HETATM 302 O O . HOH F 3 . ? 11.214 34.456 8.160 1.00 21.24 ? 114 HOH B O 1 114
HETATM 303 O O . HOH F 3 . ? 0.182 29.762 17.957 1.00 27.19 ? 115 HOH B O 1 115
HETATM 304 O O . HOH F 3 . ? -3.500 30.169 9.147 1.00 25.73 ? 116 HOH B O 1 116
HETATM 305 O O . HOH F 3 . ? -1.773 36.088 19.686 1.00 26.56 ? 117 HOH B O 1 117
HETATM 306 O O . HOH F 3 . ? 7.592 27.666 3.245 1.00 30.02 ? 118 HOH B O 1 118
HETATM 307 O O . HOH F 3 . ? -1.079 32.727 5.990 1.00 29.41 ? 119 HOH B O 1 119
HETATM 308 O O . HOH F 3 . ? -5.522 26.129 24.320 1.00 31.10 ? 120 HOH B O 1 120
HETATM 309 O O . HOH F 3 . ? -2.387 24.515 21.917 1.00 21.67 ? 121 HOH B O 1 121
HETATM 310 O O . HOH F 3 . ? 12.414 27.165 15.520 1.00 26.51 ? 122 HOH B O 1 122
HETATM 311 O O . HOH F 3 . ? 2.250 28.282 11.063 1.00 23.37 ? 123 HOH B O 1 123
HETATM 312 O O . HOH F 3 . ? 5.614 18.658 4.559 1.00 24.66 ? 124 HOH B O 1 124
HETATM 313 O O . HOH F 3 . ? -1.304 36.924 26.421 1.00 30.43 ? 125 HOH B O 1 125
HETATM 314 O O . HOH F 3 . ? -0.971 34.337 26.274 1.00 23.37 ? 126 HOH B O 1 126
HETATM 315 O O . HOH F 3 . ? -3.307 24.220 24.518 1.00 35.70 ? 127 HOH B O 1 127
HETATM 316 O O . HOH F 3 . ? 4.826 28.590 1.428 1.00 35.23 ? 128 HOH B O 1 128
HETATM 317 O O . HOH F 3 . ? 7.851 22.065 16.242 1.00 25.36 ? 129 HOH B O 1 129
HETATM 318 O O . HOH F 3 . ? 3.190 22.984 2.722 1.00 27.83 ? 130 HOH B O 1 130
HETATM 319 O O . HOH F 3 . ? 2.115 15.193 5.270 1.00 25.53 ? 131 HOH B O 1 131
HETATM 320 O O . HOH F 3 . ? -1.026 22.501 20.632 1.00 35.39 ? 132 HOH B O 1 132
HETATM 321 O O . HOH F 3 . ? -4.488 26.643 8.045 1.00 27.91 ? 133 HOH B O 1 133
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC CYT A . n
A 1 2 DG 2 2 2 DG GUA A . n
A 1 3 DC 3 3 3 DC CYT A . n
A 1 4 DG 4 4 4 DG GUA A . n
A 1 5 DC 5 5 5 DC CYT A . n
A 1 6 DG 6 6 6 DG GUA A . n
B 1 1 DC 1 7 7 DC CYT B . n
B 1 2 DG 2 8 8 DG GUA B . n
B 1 3 DC 3 9 9 DC CYT B . n
B 1 4 DG 4 10 10 DG GUA B . n
B 1 5 DC 5 11 11 DC CYT B . n
B 1 6 DG 6 12 12 DG GUA B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PAW 1 101 1 PAW PA1 A .
D 2 PAW 1 102 2 PAW PA2 B .
E 3 HOH 1 102 3 HOH WAT A .
E 3 HOH 2 103 4 HOH WAT A .
E 3 HOH 3 104 6 HOH WAT A .
E 3 HOH 4 105 7 HOH WAT A .
E 3 HOH 5 106 8 HOH WAT A .
E 3 HOH 6 107 9 HOH WAT A .
E 3 HOH 7 108 14 HOH WAT A .
E 3 HOH 8 109 16 HOH WAT A .
E 3 HOH 9 110 18 HOH WAT A .
E 3 HOH 10 111 20 HOH WAT A .
E 3 HOH 11 112 26 HOH WAT A .
E 3 HOH 12 113 27 HOH WAT A .
E 3 HOH 13 114 28 HOH WAT A .
E 3 HOH 14 115 29 HOH WAT A .
E 3 HOH 15 116 33 HOH WAT A .
E 3 HOH 16 117 34 HOH WAT A .
E 3 HOH 17 118 38 HOH WAT A .
E 3 HOH 18 119 42 HOH WAT A .
E 3 HOH 19 120 43 HOH WAT A .
E 3 HOH 20 121 47 HOH WAT A .
E 3 HOH 21 122 48 HOH WAT A .
E 3 HOH 22 123 50 HOH WAT A .
E 3 HOH 23 124 54 HOH WAT A .
E 3 HOH 24 125 55 HOH WAT A .
F 3 HOH 1 103 1 HOH WAT B .
F 3 HOH 2 104 2 HOH WAT B .
F 3 HOH 3 105 5 HOH WAT B .
F 3 HOH 4 106 10 HOH WAT B .
F 3 HOH 5 107 11 HOH WAT B .
F 3 HOH 6 108 12 HOH WAT B .
F 3 HOH 7 109 13 HOH WAT B .
F 3 HOH 8 110 15 HOH WAT B .
F 3 HOH 9 111 17 HOH WAT B .
F 3 HOH 10 112 19 HOH WAT B .
F 3 HOH 11 113 21 HOH WAT B .
F 3 HOH 12 114 22 HOH WAT B .
F 3 HOH 13 115 23 HOH WAT B .
F 3 HOH 14 116 24 HOH WAT B .
F 3 HOH 15 117 25 HOH WAT B .
F 3 HOH 16 118 30 HOH WAT B .
F 3 HOH 17 119 31 HOH WAT B .
F 3 HOH 18 120 32 HOH WAT B .
F 3 HOH 19 121 35 HOH WAT B .
F 3 HOH 20 122 36 HOH WAT B .
F 3 HOH 21 123 37 HOH WAT B .
F 3 HOH 22 124 39 HOH WAT B .
F 3 HOH 23 125 40 HOH WAT B .
F 3 HOH 24 126 41 HOH WAT B .
F 3 HOH 25 127 44 HOH WAT B .
F 3 HOH 26 128 45 HOH WAT B .
F 3 HOH 27 129 46 HOH WAT B .
F 3 HOH 28 130 49 HOH WAT B .
F 3 HOH 29 131 51 HOH WAT B .
F 3 HOH 30 132 52 HOH WAT B .
F 3 HOH 31 133 53 HOH WAT B .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details tetrameric
_pdbx_struct_assembly.oligomeric_count 4
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 2_575 -x+1/2,-y+2,z+1/2 -1.0000000000 0.0000000000 0.0000000000 8.8200000000 0.0000000000 -1.0000000000 0.0000000000 60.7600000000 0.0000000000 0.0000000000 1.0000000000 21.8150000000
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
ADSC 'data collection' Quantum ? 1
MERLOT phasing . ? 2
X-PLOR refinement 3.851 ? 3
MOSFLM 'data reduction' . ? 4
SCALA 'data scaling' . ? 5
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.686 1.512 0.174 0.007 N
2 1 C4 A DC 1 ? ? N4 A DC 1 ? ? 1.275 1.335 -0.060 0.009 N
3 1 C2 A DC 1 ? ? N3 A DC 1 ? ? 1.301 1.353 -0.052 0.008 N
4 1 C4 A DC 1 ? ? C5 A DC 1 ? ? 1.373 1.425 -0.052 0.008 N
5 1 "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? 1.442 1.516 -0.074 0.008 N
6 1 N1 A DG 2 ? ? C2 A DG 2 ? ? 1.273 1.373 -0.100 0.008 N
7 1 C6 A DG 2 ? ? N1 A DG 2 ? ? 1.338 1.391 -0.053 0.007 N
8 1 C8 A DG 2 ? ? N9 A DG 2 ? ? 1.298 1.374 -0.076 0.007 N
9 1 C2 A DG 2 ? ? N2 A DG 2 ? ? 1.264 1.341 -0.077 0.010 N
10 1 "C5'" A DC 3 ? ? "C4'" A DC 3 ? ? 1.568 1.512 0.056 0.007 N
11 1 C4 A DC 3 ? ? C5 A DC 3 ? ? 1.360 1.425 -0.065 0.008 N
12 1 P A DG 4 ? ? "O5'" A DG 4 ? ? 1.685 1.593 0.092 0.010 N
13 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 1.627 1.529 0.098 0.010 N
14 1 N3 A DG 4 ? ? C4 A DG 4 ? ? 1.410 1.350 0.060 0.007 N
15 1 C5 A DG 4 ? ? C6 A DG 4 ? ? 1.355 1.419 -0.064 0.010 N
16 1 C6 A DG 4 ? ? N1 A DG 4 ? ? 1.321 1.391 -0.070 0.007 N
17 1 N7 A DG 4 ? ? C8 A DG 4 ? ? 1.250 1.305 -0.055 0.006 N
18 1 C6 A DG 4 ? ? O6 A DG 4 ? ? 1.181 1.237 -0.056 0.009 N
19 1 "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 1.426 1.509 -0.083 0.011 N
20 1 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? 1.362 1.446 -0.084 0.010 N
21 1 C4 A DC 5 ? ? N4 A DC 5 ? ? 1.275 1.335 -0.060 0.009 N
22 1 N1 A DC 5 ? ? C2 A DC 5 ? ? 1.335 1.397 -0.062 0.010 N
23 1 N1 A DC 5 ? ? C6 A DC 5 ? ? 1.324 1.367 -0.043 0.006 N
24 1 N3 A DC 5 ? ? C4 A DC 5 ? ? 1.286 1.335 -0.049 0.007 N
25 1 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 1.396 1.521 -0.125 0.010 N
26 1 "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 1.411 1.516 -0.105 0.008 N
27 1 "C2'" A DG 6 ? ? "C1'" A DG 6 ? ? 1.423 1.518 -0.095 0.010 N
28 1 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? 1.360 1.446 -0.086 0.010 N
29 1 "O3'" A DG 6 ? ? "C3'" A DG 6 ? ? 1.354 1.419 -0.065 0.006 N
30 1 N1 A DG 6 ? ? C2 A DG 6 ? ? 1.323 1.373 -0.050 0.008 N
31 1 C4 A DG 6 ? ? C5 A DG 6 ? ? 1.333 1.379 -0.046 0.007 N
32 1 N7 A DG 6 ? ? C8 A DG 6 ? ? 1.263 1.305 -0.042 0.006 N
33 1 C8 A DG 6 ? ? N9 A DG 6 ? ? 1.286 1.374 -0.088 0.007 N
34 1 "C4'" B DC 7 ? ? "C3'" B DC 7 ? ? 1.589 1.529 0.060 0.010 N
35 1 N1 B DC 7 ? ? C2 B DC 7 ? ? 1.291 1.397 -0.106 0.010 N
36 1 C2 B DC 7 ? ? N3 B DC 7 ? ? 1.302 1.353 -0.051 0.008 N
37 1 N3 B DC 7 ? ? C4 B DC 7 ? ? 1.256 1.335 -0.079 0.007 N
38 1 "C2'" B DG 8 ? ? "C1'" B DG 8 ? ? 1.416 1.518 -0.102 0.010 N
39 1 N1 B DG 8 ? ? C2 B DG 8 ? ? 1.305 1.373 -0.068 0.008 N
40 1 C4 B DG 8 ? ? C5 B DG 8 ? ? 1.317 1.379 -0.062 0.007 N
41 1 "O3'" B DG 8 ? ? P B DC 9 ? ? 1.468 1.607 -0.139 0.012 Y
42 1 P B DC 9 ? ? "O5'" B DC 9 ? ? 1.492 1.593 -0.101 0.010 N
43 1 N3 B DC 9 ? ? C4 B DC 9 ? ? 1.264 1.335 -0.071 0.007 N
44 1 C4 B DC 9 ? ? C5 B DC 9 ? ? 1.347 1.425 -0.078 0.008 N
45 1 P B DG 10 ? ? "O5'" B DG 10 ? ? 1.435 1.593 -0.158 0.010 N
46 1 "C5'" B DG 10 ? ? "C4'" B DG 10 ? ? 1.390 1.509 -0.119 0.011 N
47 1 "O4'" B DG 10 ? ? "C4'" B DG 10 ? ? 1.348 1.446 -0.098 0.010 N
48 1 C2 B DG 10 ? ? N3 B DG 10 ? ? 1.264 1.323 -0.059 0.008 N
49 1 C4 B DG 10 ? ? C5 B DG 10 ? ? 1.327 1.379 -0.052 0.007 N
50 1 C5 B DG 10 ? ? C6 B DG 10 ? ? 1.326 1.419 -0.093 0.010 N
51 1 C5 B DG 10 ? ? N7 B DG 10 ? ? 1.315 1.388 -0.073 0.006 N
52 1 N7 B DG 10 ? ? C8 B DG 10 ? ? 1.258 1.305 -0.047 0.006 N
53 1 C8 B DG 10 ? ? N9 B DG 10 ? ? 1.298 1.374 -0.076 0.007 N
54 1 N9 B DG 10 ? ? C4 B DG 10 ? ? 1.285 1.375 -0.090 0.008 N
55 1 "C5'" B DC 11 ? ? "C4'" B DC 11 ? ? 1.586 1.512 0.074 0.007 N
56 1 "O3'" B DC 11 ? ? "C3'" B DC 11 ? ? 1.529 1.435 0.094 0.013 N
57 1 N3 B DC 11 ? ? C4 B DC 11 ? ? 1.286 1.335 -0.049 0.007 N
58 1 C4 B DC 11 ? ? C5 B DC 11 ? ? 1.364 1.425 -0.061 0.008 N
59 1 "O3'" B DC 11 ? ? P B DG 12 ? ? 1.691 1.607 0.084 0.012 Y
60 1 P B DG 12 ? ? "O5'" B DG 12 ? ? 1.522 1.593 -0.071 0.010 N
61 1 "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? 1.612 1.512 0.100 0.007 N
62 1 "C4'" B DG 12 ? ? "C3'" B DG 12 ? ? 1.402 1.521 -0.119 0.010 N
63 1 "C3'" B DG 12 ? ? "C2'" B DG 12 ? ? 1.424 1.516 -0.092 0.008 N
64 1 "C2'" B DG 12 ? ? "C1'" B DG 12 ? ? 1.447 1.518 -0.071 0.010 N
65 1 "O3'" B DG 12 ? ? "C3'" B DG 12 ? ? 1.342 1.419 -0.077 0.006 N
66 1 C2 B DG 12 ? ? N3 B DG 12 ? ? 1.248 1.323 -0.075 0.008 N
67 1 N3 B DG 12 ? ? C4 B DG 12 ? ? 1.283 1.350 -0.067 0.007 N
68 1 C4 B DG 12 ? ? C5 B DG 12 ? ? 1.324 1.379 -0.055 0.007 N
69 1 C5 B DG 12 ? ? C6 B DG 12 ? ? 1.344 1.419 -0.075 0.010 N
70 1 C5 B DG 12 ? ? N7 B DG 12 ? ? 1.327 1.388 -0.061 0.006 N
71 1 N7 B DG 12 ? ? C8 B DG 12 ? ? 1.263 1.305 -0.042 0.006 N
72 1 C2 B DG 12 ? ? N2 B DG 12 ? ? 1.267 1.341 -0.074 0.010 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O5'" A DC 1 ? ? "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 132.86 111.00 21.86 2.50 N
2 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 98.48 104.50 -6.02 0.40 N
3 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 128.00 115.70 12.30 1.20 N
4 1 "C1'" A DC 1 ? ? "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 114.57 110.30 4.27 0.70 N
5 1 C2 A DC 1 ? ? N3 A DC 1 ? ? C4 A DC 1 ? ? 123.98 119.90 4.08 0.50 N
6 1 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DG 2 ? ? 129.17 119.70 9.47 1.20 Y
7 1 "O5'" A DG 2 ? ? P A DG 2 ? ? OP2 A DG 2 ? ? 99.44 105.70 -6.26 0.90 N
8 1 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 101.73 104.50 -2.77 0.40 N
9 1 "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 126.62 115.70 10.92 1.20 N
10 1 "C1'" A DG 2 ? ? "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? 101.54 110.10 -8.56 1.00 N
11 1 N1 A DG 2 ? ? C2 A DG 2 ? ? N3 A DG 2 ? ? 129.03 123.90 5.13 0.60 N
12 1 C2 A DG 2 ? ? N3 A DG 2 ? ? C4 A DG 2 ? ? 106.83 111.90 -5.07 0.50 N
13 1 N3 A DG 2 ? ? C4 A DG 2 ? ? C5 A DG 2 ? ? 124.84 128.60 -3.76 0.50 N
14 1 N1 A DG 2 ? ? C2 A DG 2 ? ? N2 A DG 2 ? ? 104.18 116.20 -12.02 0.90 N
15 1 N3 A DG 2 ? ? C2 A DG 2 ? ? N2 A DG 2 ? ? 126.37 119.90 6.47 0.70 N
16 1 P A DC 3 ? ? "O5'" A DC 3 ? ? "C5'" A DC 3 ? ? 137.42 120.90 16.52 1.60 N
17 1 "C4'" A DC 3 ? ? "C3'" A DC 3 ? ? "C2'" A DC 3 ? ? 92.25 102.20 -9.95 0.70 N
18 1 "C3'" A DC 3 ? ? "C2'" A DC 3 ? ? "C1'" A DC 3 ? ? 111.15 102.50 8.65 1.20 N
19 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? "C2'" A DC 3 ? ? 98.38 105.90 -7.52 0.80 N
20 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 102.67 108.00 -5.33 0.70 N
21 1 C6 A DC 3 ? ? N1 A DC 3 ? ? C2 A DC 3 ? ? 126.35 120.30 6.05 0.40 N
22 1 N1 A DC 3 ? ? C2 A DC 3 ? ? N3 A DC 3 ? ? 112.30 119.20 -6.90 0.70 N
23 1 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 128.39 121.90 6.49 0.70 N
24 1 N3 A DC 3 ? ? C4 A DC 3 ? ? N4 A DC 3 ? ? 123.54 118.00 5.54 0.70 N
25 1 C5 A DC 3 ? ? C4 A DC 3 ? ? N4 A DC 3 ? ? 113.01 120.20 -7.19 0.70 N
26 1 P A DG 4 ? ? "O5'" A DG 4 ? ? "C5'" A DG 4 ? ? 135.00 120.90 14.10 1.60 N
27 1 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 125.56 115.70 9.86 1.20 N
28 1 C5 A DG 4 ? ? C6 A DG 4 ? ? N1 A DG 4 ? ? 115.43 111.50 3.93 0.50 N
29 1 C4 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 114.08 110.80 3.28 0.40 N
30 1 N9 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 102.10 105.40 -3.30 0.40 N
31 1 "O3'" A DG 4 ? ? P A DC 5 ? ? OP1 A DC 5 ? ? 118.54 110.50 8.04 1.10 Y
32 1 "O5'" A DC 5 ? ? P A DC 5 ? ? OP2 A DC 5 ? ? 97.38 105.70 -8.32 0.90 N
33 1 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 111.74 106.00 5.74 0.60 N
34 1 "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? 96.45 102.20 -5.75 0.70 N
35 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 102.88 108.00 -5.12 0.70 N
36 1 "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? 101.13 109.40 -8.27 0.80 N
37 1 P A DG 6 ? ? "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? 131.50 120.90 10.60 1.60 N
38 1 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 99.24 104.50 -5.26 0.40 N
39 1 "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? "O4'" A DG 6 ? ? 118.45 109.80 8.65 1.10 N
40 1 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 112.06 103.10 8.96 0.90 N
41 1 N1 A DG 6 ? ? C2 A DG 6 ? ? N3 A DG 6 ? ? 118.36 123.90 -5.54 0.60 N
42 1 C2 A DG 6 ? ? N3 A DG 6 ? ? C4 A DG 6 ? ? 116.07 111.90 4.17 0.50 N
43 1 C4 A DG 6 ? ? C5 A DG 6 ? ? N7 A DG 6 ? ? 108.39 110.80 -2.41 0.40 N
44 1 N1 A DG 6 ? ? C6 A DG 6 ? ? O6 A DG 6 ? ? 115.74 119.90 -4.16 0.60 N
45 1 C5 A DG 6 ? ? C6 A DG 6 ? ? O6 A DG 6 ? ? 132.22 128.60 3.62 0.60 N
46 1 "O4'" B DC 7 ? ? "C4'" B DC 7 ? ? "C3'" B DC 7 ? ? 111.75 106.00 5.75 0.60 N
47 1 "C5'" B DC 7 ? ? "C4'" B DC 7 ? ? "O4'" B DC 7 ? ? 90.44 109.30 -18.86 1.90 N
48 1 "C4'" B DC 7 ? ? "C3'" B DC 7 ? ? "C2'" B DC 7 ? ? 97.16 102.20 -5.04 0.70 N
49 1 C6 B DC 7 ? ? N1 B DC 7 ? ? C2 B DC 7 ? ? 117.47 120.30 -2.83 0.40 N
50 1 C2 B DC 7 ? ? N3 B DC 7 ? ? C4 B DC 7 ? ? 124.87 119.90 4.97 0.50 N
51 1 N3 B DC 7 ? ? C4 B DC 7 ? ? C5 B DC 7 ? ? 116.46 121.90 -5.44 0.40 N
52 1 N1 B DC 7 ? ? C2 B DC 7 ? ? O2 B DC 7 ? ? 123.67 118.90 4.77 0.60 N
53 1 N3 B DC 7 ? ? C2 B DC 7 ? ? O2 B DC 7 ? ? 115.79 121.90 -6.11 0.70 N
54 1 C5 B DC 7 ? ? C4 B DC 7 ? ? N4 B DC 7 ? ? 128.75 120.20 8.55 0.70 N
55 1 "C3'" B DC 7 ? ? "O3'" B DC 7 ? ? P B DG 8 ? ? 135.10 119.70 15.40 1.20 Y
56 1 "C1'" B DG 8 ? ? "O4'" B DG 8 ? ? "C4'" B DG 8 ? ? 114.68 110.30 4.38 0.70 N
57 1 "C4'" B DG 8 ? ? "C3'" B DG 8 ? ? "C2'" B DG 8 ? ? 97.03 102.20 -5.17 0.70 N
58 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 100.71 108.00 -7.29 0.70 N
59 1 C8 B DG 8 ? ? N9 B DG 8 ? ? C4 B DG 8 ? ? 102.78 106.40 -3.62 0.40 N
60 1 N9 B DG 8 ? ? C4 B DG 8 ? ? C5 B DG 8 ? ? 107.98 105.40 2.58 0.40 N
61 1 N1 B DG 8 ? ? C2 B DG 8 ? ? N2 B DG 8 ? ? 122.64 116.20 6.44 0.90 N
62 1 "C3'" B DG 8 ? ? "O3'" B DG 8 ? ? P B DC 9 ? ? 128.75 119.70 9.05 1.20 Y
63 1 "C5'" B DC 9 ? ? "C4'" B DC 9 ? ? "C3'" B DC 9 ? ? 124.96 115.70 9.26 1.20 N
64 1 "C5'" B DC 9 ? ? "C4'" B DC 9 ? ? "O4'" B DC 9 ? ? 97.79 109.30 -11.51 1.90 N
65 1 "C4'" B DC 9 ? ? "C3'" B DC 9 ? ? "O3'" B DC 9 ? ? 127.28 112.30 14.98 2.00 N
66 1 "O4'" B DC 9 ? ? "C1'" B DC 9 ? ? "C2'" B DC 9 ? ? 110.95 106.80 4.15 0.50 N
67 1 N1 B DC 9 ? ? C2 B DC 9 ? ? N3 B DC 9 ? ? 111.46 119.20 -7.74 0.70 N
68 1 C2 B DC 9 ? ? N3 B DC 9 ? ? C4 B DC 9 ? ? 125.69 119.90 5.79 0.50 N
69 1 N3 B DC 9 ? ? C2 B DC 9 ? ? O2 B DC 9 ? ? 127.01 121.90 5.11 0.70 N
70 1 P B DG 10 ? ? "O5'" B DG 10 ? ? "C5'" B DG 10 ? ? 105.57 120.90 -15.33 1.60 N
71 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 101.72 108.00 -6.28 0.70 N
72 1 C5 B DG 10 ? ? N7 B DG 10 ? ? C8 B DG 10 ? ? 100.98 104.30 -3.32 0.50 N
73 1 "C3'" B DG 10 ? ? "O3'" B DG 10 ? ? P B DC 11 ? ? 130.55 119.70 10.85 1.20 Y
74 1 "O3'" B DG 10 ? ? P B DC 11 ? ? "O5'" B DC 11 ? ? 75.87 104.00 -28.13 1.90 Y
75 1 "O5'" B DC 11 ? ? P B DC 11 ? ? OP1 B DC 11 ? ? 121.18 110.70 10.48 1.20 N
76 1 "O4'" B DC 11 ? ? "C4'" B DC 11 ? ? "C3'" B DC 11 ? ? 113.38 106.00 7.38 0.60 N
77 1 "C4'" B DC 11 ? ? "C3'" B DC 11 ? ? "C2'" B DC 11 ? ? 91.60 102.20 -10.60 0.70 N
78 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? "C2'" B DC 11 ? ? 100.52 105.90 -5.38 0.80 N
79 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 112.84 108.30 4.54 0.30 N
80 1 C6 B DC 11 ? ? N1 B DC 11 ? ? C2 B DC 11 ? ? 117.08 120.30 -3.22 0.40 N
81 1 N1 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 124.92 118.90 6.02 0.60 N
82 1 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 114.40 121.90 -7.50 0.70 N
83 1 "C3'" B DC 11 ? ? "O3'" B DC 11 ? ? P B DG 12 ? ? 131.61 119.70 11.91 1.20 Y
84 1 "O4'" B DG 12 ? ? "C4'" B DG 12 ? ? "C3'" B DG 12 ? ? 94.96 104.50 -9.54 0.40 N
85 1 "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? "O4'" B DG 12 ? ? 119.11 109.80 9.31 1.10 N
86 1 "C4'" B DG 12 ? ? "C3'" B DG 12 ? ? "C2'" B DG 12 ? ? 112.53 103.10 9.43 0.90 N
87 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.04 108.30 4.74 0.30 N
88 1 C8 B DG 12 ? ? N9 B DG 12 ? ? C4 B DG 12 ? ? 102.80 106.40 -3.60 0.40 N
89 1 N1 B DG 12 ? ? C2 B DG 12 ? ? N2 B DG 12 ? ? 123.43 116.20 7.23 0.90 N
90 1 N3 B DG 12 ? ? C2 B DG 12 ? ? N2 B DG 12 ? ? 111.33 119.90 -8.57 0.70 N
91 1 N1 B DG 12 ? ? C6 B DG 12 ? ? O6 B DG 12 ? ? 125.24 119.90 5.34 0.60 N
#
loop_
_pdbx_validate_planes.id
_pdbx_validate_planes.PDB_model_num
_pdbx_validate_planes.auth_comp_id
_pdbx_validate_planes.auth_asym_id
_pdbx_validate_planes.auth_seq_id
_pdbx_validate_planes.PDB_ins_code
_pdbx_validate_planes.label_alt_id
_pdbx_validate_planes.rmsd
_pdbx_validate_planes.type
1 1 DG A 2 ? ? 0.160 'SIDE CHAIN'
2 1 DG A 4 ? ? 0.069 'SIDE CHAIN'
3 1 DG A 6 ? ? 0.092 'SIDE CHAIN'
4 1 DC B 7 ? ? 0.070 'SIDE CHAIN'
5 1 DG B 8 ? ? 0.110 'SIDE CHAIN'
6 1 DC B 9 ? ? 0.090 'SIDE CHAIN'
7 1 DG B 10 ? ? 0.147 'SIDE CHAIN'
8 1 DG B 12 ? ? 0.077 'SIDE CHAIN'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DC OP3 O N N 1
DC P P N N 2
DC OP1 O N N 3
DC OP2 O N N 4
DC "O5'" O N N 5
DC "C5'" C N N 6
DC "C4'" C N R 7
DC "O4'" O N N 8
DC "C3'" C N S 9
DC "O3'" O N N 10
DC "C2'" C N N 11
DC "C1'" C N R 12
DC N1 N N N 13
DC C2 C N N 14
DC O2 O N N 15
DC N3 N N N 16
DC C4 C N N 17
DC N4 N N N 18
DC C5 C N N 19
DC C6 C N N 20
DC HOP3 H N N 21
DC HOP2 H N N 22
DC "H5'" H N N 23
DC "H5''" H N N 24
DC "H4'" H N N 25
DC "H3'" H N N 26
DC "HO3'" H N N 27
DC "H2'" H N N 28
DC "H2''" H N N 29
DC "H1'" H N N 30
DC H41 H N N 31
DC H42 H N N 32
DC H5 H N N 33
DC H6 H N N 34
DG OP3 O N N 35
DG P P N N 36
DG OP1 O N N 37
DG OP2 O N N 38
DG "O5'" O N N 39
DG "C5'" C N N 40
DG "C4'" C N R 41
DG "O4'" O N N 42
DG "C3'" C N S 43
DG "O3'" O N N 44
DG "C2'" C N N 45
DG "C1'" C N R 46
DG N9 N Y N 47
DG C8 C Y N 48
DG N7 N Y N 49
DG C5 C Y N 50
DG C6 C N N 51
DG O6 O N N 52
DG N1 N N N 53
DG C2 C N N 54
DG N2 N N N 55
DG N3 N N N 56
DG C4 C Y N 57
DG HOP3 H N N 58
DG HOP2 H N N 59
DG "H5'" H N N 60
DG "H5''" H N N 61
DG "H4'" H N N 62
DG "H3'" H N N 63
DG "HO3'" H N N 64
DG "H2'" H N N 65
DG "H2''" H N N 66
DG "H1'" H N N 67
DG H8 H N N 68
DG H1 H N N 69
DG H21 H N N 70
DG H22 H N N 71
HOH O O N N 72
HOH H1 H N N 73
HOH H2 H N N 74
PAW N1 N N N 75
PAW C2 C N N 76
PAW C3 C N N 77
PAW C5 C N N 78
PAW C6 C N N 79
PAW N4 N N N 80
PAW N7 N N N 81
PAW C8 C N N 82
PAW C9 C N N 83
PAW N10 N N N 84
PAW C11 C N N 85
PAW C12 C N N 86
PAW N13 N N N 87
PAW HN11 H N N 88
PAW HN12 H N N 89
PAW H21 H N N 90
PAW H22 H N N 91
PAW H31 H N N 92
PAW H32 H N N 93
PAW H51 H N N 94
PAW H52 H N N 95
PAW H61 H N N 96
PAW H62 H N N 97
PAW HN4 H N N 98
PAW HN7 H N N 99
PAW H81 H N N 100
PAW H82 H N N 101
PAW H91 H N N 102
PAW H92 H N N 103
PAW HN10 H N N 104
PAW H111 H N N 105
PAW H112 H N N 106
PAW H121 H N N 107
PAW H122 H N N 108
PAW H131 H N N 109
PAW H132 H N N 110
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DC OP3 P SING N N 1
DC OP3 HOP3 SING N N 2
DC P OP1 DOUB N N 3
DC P OP2 SING N N 4
DC P "O5'" SING N N 5
DC OP2 HOP2 SING N N 6
DC "O5'" "C5'" SING N N 7
DC "C5'" "C4'" SING N N 8
DC "C5'" "H5'" SING N N 9
DC "C5'" "H5''" SING N N 10
DC "C4'" "O4'" SING N N 11
DC "C4'" "C3'" SING N N 12
DC "C4'" "H4'" SING N N 13
DC "O4'" "C1'" SING N N 14
DC "C3'" "O3'" SING N N 15
DC "C3'" "C2'" SING N N 16
DC "C3'" "H3'" SING N N 17
DC "O3'" "HO3'" SING N N 18
DC "C2'" "C1'" SING N N 19
DC "C2'" "H2'" SING N N 20
DC "C2'" "H2''" SING N N 21
DC "C1'" N1 SING N N 22
DC "C1'" "H1'" SING N N 23
DC N1 C2 SING N N 24
DC N1 C6 SING N N 25
DC C2 O2 DOUB N N 26
DC C2 N3 SING N N 27
DC N3 C4 DOUB N N 28
DC C4 N4 SING N N 29
DC C4 C5 SING N N 30
DC N4 H41 SING N N 31
DC N4 H42 SING N N 32
DC C5 C6 DOUB N N 33
DC C5 H5 SING N N 34
DC C6 H6 SING N N 35
DG OP3 P SING N N 1
DG OP3 HOP3 SING N N 2
DG P OP1 DOUB N N 3
DG P OP2 SING N N 4
DG P "O5'" SING N N 5
DG OP2 HOP2 SING N N 6
DG "O5'" "C5'" SING N N 7
DG "C5'" "C4'" SING N N 8
DG "C5'" "H5'" SING N N 9
DG "C5'" "H5''" SING N N 10
DG "C4'" "O4'" SING N N 11
DG "C4'" "C3'" SING N N 12
DG "C4'" "H4'" SING N N 13
DG "O4'" "C1'" SING N N 14
DG "C3'" "O3'" SING N N 15
DG "C3'" "C2'" SING N N 16
DG "C3'" "H3'" SING N N 17
DG "O3'" "HO3'" SING N N 18
DG "C2'" "C1'" SING N N 19
DG "C2'" "H2'" SING N N 20
DG "C2'" "H2''" SING N N 21
DG "C1'" N9 SING N N 22
DG "C1'" "H1'" SING N N 23
DG N9 C8 SING Y N 24
DG N9 C4 SING Y N 25
DG C8 N7 DOUB Y N 26
DG C8 H8 SING N N 27
DG N7 C5 SING Y N 28
DG C5 C6 SING N N 29
DG C5 C4 DOUB Y N 30
DG C6 O6 DOUB N N 31
DG C6 N1 SING N N 32
DG N1 C2 SING N N 33
DG N1 H1 SING N N 34
DG C2 N2 SING N N 35
DG C2 N3 DOUB N N 36
DG N2 H21 SING N N 37
DG N2 H22 SING N N 38
DG N3 C4 SING N N 39
HOH O H1 SING N N 1
HOH O H2 SING N N 2
PAW N1 C2 SING N N 1
PAW N1 HN11 SING N N 2
PAW N1 HN12 SING N N 3
PAW C2 C3 SING N N 4
PAW C2 H21 SING N N 5
PAW C2 H22 SING N N 6
PAW C3 N4 SING N N 7
PAW C3 H31 SING N N 8
PAW C3 H32 SING N N 9
PAW C5 N4 SING N N 10
PAW C5 C6 SING N N 11
PAW C5 H51 SING N N 12
PAW C5 H52 SING N N 13
PAW C6 N7 SING N N 14
PAW C6 H61 SING N N 15
PAW C6 H62 SING N N 16
PAW N4 HN4 SING N N 17
PAW N7 C8 SING N N 18
PAW N7 HN7 SING N N 19
PAW C8 C9 SING N N 20
PAW C8 H81 SING N N 21
PAW C8 H82 SING N N 22
PAW C9 N10 SING N N 23
PAW C9 H91 SING N N 24
PAW C9 H92 SING N N 25
PAW N10 C11 SING N N 26
PAW N10 HN10 SING N N 27
PAW C11 C12 SING N N 28
PAW C11 H111 SING N N 29
PAW C11 H112 SING N N 30
PAW C12 N13 SING N N 31
PAW C12 H121 SING N N 32
PAW C12 H122 SING N N 33
PAW N13 H131 SING N N 34
PAW N13 H132 SING N N 35
#
_ndb_struct_conf_na.entry_id 2IE1
_ndb_struct_conf_na.feature 'z-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 B DG 6 1_555 -0.424 -0.322 0.400 3.134 0.206 -2.839 1 A_DC1:DG12_B A 1 ? B 12 ? 19 1
1 A DG 2 1_555 B DC 5 1_555 0.032 -0.080 -0.119 -0.222 -4.810 -3.401 2 A_DG2:DC11_B A 2 ? B 11 ? 19 1
1 A DC 3 1_555 B DG 4 1_555 -0.343 -0.318 0.060 6.660 7.134 -8.324 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1
1 A DG 4 1_555 B DC 3 1_555 0.446 -0.334 -0.100 -3.396 3.008 5.990 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1
1 A DC 5 1_555 B DG 2 1_555 0.051 -0.265 -0.020 -4.927 -8.495 6.118 5 A_DC5:DG8_B A 5 ? B 8 ? 19 1
1 A DG 6 1_555 B DC 1 1_555 0.378 -0.164 0.325 5.467 3.526 -0.137 6 A_DG6:DC7_B A 6 ? B 7 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 B DG 6 1_555 A DG 2 1_555 B DC 5 1_555 0.161 5.157 3.598 4.201 -8.304 -5.749 -2.692 13.174 5.744 52.075 26.345 -10.935 1 AA_DC1DG2:DC11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ?
1 A DG 2 1_555 B DC 5 1_555 A DC 3 1_555 B DG 4 1_555 0.010 -0.563 3.250 -4.090 -2.000 -49.930 0.807 -0.280 3.218 2.364 -4.833 -50.123 2 AA_DG2DC3:DG10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ?
1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 0.378 5.096 3.649 1.633 -1.645 -7.082 -32.115 9.951 4.509 12.869 12.780 -7.452 3 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ?
1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 -0.157 -0.898 3.534 0.089 -2.934 -50.253 1.281 -0.177 3.480 3.451 0.105 -50.333 4 AA_DG4DC5:DG8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ?
1 A DC 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 -0.382 5.576 3.056 -2.192 -4.670 -11.978 -18.176 -4.678 4.734 21.142 -9.924 -13.038 5 AA_DC5DG6:DC7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 "N-(2-AMINOETHYL)-N'-{2-[(2-AMINOETHYL)AMINO]ETHYL}ETHANE-1,2-DIAMINE" PAW
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1DJ6
_pdbx_initial_refinement_model.details '1dj6 in PDB'
#