› 6xux

X-ray diffraction
1.9Å resolution

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-154828 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glucosidase YgjK Chain: A
Molecule details ›
Chain: A
Length: 907 amino acids
Theoretical weight: 101.62 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli
UniProt:
  • Canonical: P42592 (Residues: 487-5, 24-484; Coverage: 97%)
Gene names: JW3051, b3080, ygjK
Sequence domains: Glucosidase YgjK, N-terminal

Ligands and Environments

1 bound ligand:
Ligand CA 1 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P212121
Unit cell:
a: 67.45Å b: 84.46Å c: 140.32Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.189 0.23
Expression system: Escherichia coli

Quick links

Citations

12 review citations

Exploring cellular biochemistry with nanobodies.
Cheloha et al. (2020)
11 more

2 mentions without citation

Megabodies expand the nanobody toolkit for protein structure determination by single-particle cryo-EM.
Uchański et al. (2021)
1 more