6o3y

X-ray diffraction
2.8Å resolution

Crystal structure of yeast Nrd1 CID in complex with Sen1 NIM3

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-156833 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Protein NRD1 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 172 amino acids
Theoretical weight: 19.24 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P53617 (Residues: 6-156; Coverage: 26%)
Gene names: N0868, NRD1, YNL251C
Sequence domains: CID domain
Helicase SEN1 Chains: D, E, F
Molecule details ›
Chains: D, E, F
Length: 13 amino acids
Theoretical weight: 1.53 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Not provided
UniProt:
  • Canonical: Q00416 (Residues: 2181-2193; Coverage: 1%)
Gene names: L9576.1, SEN1, YLR430W

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: C2221
Unit cell:
a: 98.671Å b: 103.046Å c: 115.365Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.24 0.237 0.3
Expression systems:
  • Escherichia coli
  • Not provided